View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4446_low_7 (Length: 215)
Name: NF4446_low_7
Description: NF4446
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4446_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 31310967 - 31311158
Alignment:
| Q |
1 |
gtgaatcaagtaaatttaaggaatatttaaaaattgattgatttcagagagtaatatgagagcagcaacagtttaatgaagtaaattgatggatacccac |
100 |
Q |
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| T |
31310967 |
gtgaatcaagtaaatttaaggaatatttaaaaattgattgatttcagagagtaatatgagagcagcaacagtttaatgaagtaaattgatggatacccac |
31311066 |
T |
|
| Q |
101 |
caagaaacaaaagaaattaaagtcaaacatataagtgaatgatgtttaattctcatttatgattctacagtggggagacatgtatttaaagg |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31311067 |
caagaaacaaaagaaattaaagtcaaacatataagtgaatgatgtttaattctcatttatgattctacagtggggagacatgtatttaaagg |
31311158 |
T |
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