View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4452-Insertion-11 (Length: 295)

Name: NF4452-Insertion-11
Description: NF4452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4452-Insertion-11
NF4452-Insertion-11
[»] chr8 (1 HSPs)
chr8 (7-295)||(45362319-45362607)


Alignment Details
Target: chr8 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 7 - 295
Target Start/End: Original strand, 45362319 - 45362607
Alignment:
Q  7 agtgaggagatcaaatgcttcaagaaggtctcattctcagtctcatacaacacctcgagcttcaaatctgacgaatgcagagatatactctttgcaatca 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45362319 agtgaggagatcaaatgcttcaagaaggtctcattctcagtctcatacaacacctcgagcttcaaatctgacgaatgcagagatatactctttgcaatca 45362418  T
Q  107 tcaaggaatccaactccaagagggtctagtttcaaccacacagatttacattccatgatgggtggtagtcgtaattctaactttggtgcttctgatttga 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45362419 tcaaggaatccaactccaagagggtctagtttcaaccacacagatttacattccatgatgggtggtagtcgtaattctaactttggtgcttttgatttga 45362518  T
Q  207 aaggaacaccaccgaggacttgtaattatgataattcagtgtctacgacaaaggggaattaccctgcgccaaaccccgaaatgttctct 295  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45362519 aaggaacaccaccgaggacttgtaattatgataattcaatgtctacgacaaaggggaattaccctgcgccaaaccccgaaatgttctct 45362607  T

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