View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4452-Insertion-6 (Length: 717)

Name: NF4452-Insertion-6
Description: NF4452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4452-Insertion-6
NF4452-Insertion-6
[»] chr7 (66 HSPs)
chr7 (515-714)||(5716420-5716620)
chr7 (319-456)||(27130334-27130469)
chr7 (178-306)||(5716652-5716780)
chr7 (319-452)||(22486398-22486531)
chr7 (314-452)||(15014402-15014540)
chr7 (319-452)||(21917336-21917469)
chr7 (319-452)||(23232043-23232176)
chr7 (319-452)||(23577191-23577324)
chr7 (333-452)||(31042255-31042374)
chr7 (319-452)||(1842898-1843031)
chr7 (319-452)||(18217833-18217966)
chr7 (319-452)||(23750738-23750871)
chr7 (323-452)||(31425517-31425646)
chr7 (347-456)||(38057632-38057741)
chr7 (319-451)||(6849213-6849345)
chr7 (56-125)||(5716854-5716923)
chr7 (319-452)||(11036511-11036644)
chr7 (319-448)||(20923960-20924089)
chr7 (319-452)||(23699827-23699960)
chr7 (319-452)||(24605842-24605975)
chr7 (319-452)||(27806022-27806155)
chr7 (319-452)||(28800882-28801015)
chr7 (319-452)||(47523652-47523785)
chr7 (317-452)||(32267351-32267485)
chr7 (319-437)||(23539251-23539369)
chr7 (319-452)||(816193-816326)
chr7 (319-452)||(1907359-1907492)
chr7 (319-452)||(7733314-7733447)
chr7 (327-452)||(20174024-20174149)
chr7 (319-452)||(37135287-37135420)
chr7 (327-452)||(39979634-39979759)
chr7 (319-452)||(40847437-40847570)
chr7 (319-442)||(3872189-3872312)
chr7 (319-442)||(3904480-3904603)
chr7 (319-452)||(9698540-9698673)
chr7 (347-452)||(10050866-10050971)
chr7 (326-443)||(11852021-11852138)
chr7 (319-452)||(20429469-20429602)
chr7 (347-452)||(22501598-22501703)
chr7 (323-452)||(48933140-48933269)
chr7 (319-442)||(1824202-1824325)
chr7 (319-442)||(4514779-4514902)
chr7 (319-446)||(21623031-21623157)
chr7 (353-452)||(36636510-36636609)
chr7 (319-452)||(27132723-27132856)
chr7 (319-448)||(36993828-36993957)
chr7 (319-437)||(2650830-2650948)
chr7 (319-452)||(42926421-42926555)
chr7 (359-452)||(45664772-45664865)
chr7 (321-452)||(2457674-2457803)
chr7 (319-452)||(21871576-21871705)
chr7 (362-456)||(25777157-25777251)
chr7 (326-452)||(26415428-26415554)
chr7 (353-442)||(26577279-26577368)
chr7 (319-456)||(33427690-33427826)
chr7 (321-427)||(27304899-27305005)
chr7 (379-452)||(687881-687954)
chr7 (347-452)||(11890177-11890282)
chr7 (319-452)||(24140454-24140587)
chr7 (314-450)||(14786632-14786768)
chr7 (319-444)||(15969796-15969922)
chr7 (374-456)||(15330262-15330344)
chr7 (482-534)||(7388211-7388263)
chr7 (390-446)||(10222702-10222758)
chr7 (125-163)||(5716937-5716975)
chr7 (359-424)||(1841824-1841889)
[»] chr6 (69 HSPs)
chr6 (319-452)||(9892967-9893100)
chr6 (314-452)||(28364915-28365053)
chr6 (319-452)||(2992619-2992752)
chr6 (319-452)||(15364460-15364593)
chr6 (320-452)||(25398006-25398138)
chr6 (319-452)||(495629-495762)
chr6 (319-452)||(6598468-6598601)
chr6 (319-452)||(12351588-12351721)
chr6 (323-452)||(22579355-22579484)
chr6 (319-446)||(15448395-15448522)
chr6 (322-452)||(12200698-12200828)
chr6 (319-452)||(12951712-12951845)
chr6 (319-452)||(18048792-18048925)
chr6 (319-452)||(22083842-22083975)
chr6 (319-452)||(24661011-24661144)
chr6 (319-451)||(26224433-26224565)
chr6 (319-437)||(5360428-5360546)
chr6 (346-452)||(12845007-12845113)
chr6 (319-452)||(21691497-21691631)
chr6 (319-452)||(17919540-17919673)
chr6 (346-451)||(23281791-23281896)
chr6 (319-448)||(30833962-30834091)
chr6 (320-452)||(21140943-21141075)
chr6 (319-442)||(6605498-6605621)
chr6 (319-446)||(9885253-9885380)
chr6 (319-442)||(28668114-28668237)
chr6 (319-452)||(2669313-2669446)
chr6 (319-444)||(11049753-11049878)
chr6 (319-452)||(16250804-16250937)
chr6 (319-452)||(20182149-20182282)
chr6 (319-452)||(21990177-21990309)
chr6 (319-452)||(22153709-22153842)
chr6 (324-448)||(9060099-9060222)
chr6 (323-442)||(5192195-5192314)
chr6 (320-442)||(11077663-11077785)
chr6 (358-452)||(27705426-27705520)
chr6 (319-452)||(1939244-1939377)
chr6 (319-452)||(14886565-14886698)
chr6 (319-452)||(18033528-18033660)
chr6 (353-452)||(5270396-5270496)
chr6 (320-442)||(14872133-14872255)
chr6 (347-452)||(343593-343698)
chr6 (319-444)||(26939599-26939724)
chr6 (319-452)||(27796836-27796969)
chr6 (319-444)||(33250710-33250835)
chr6 (358-442)||(33547560-33547644)
chr6 (327-426)||(6978307-6978406)
chr6 (321-452)||(12157380-12157511)
chr6 (347-442)||(13145016-13145111)
chr6 (323-426)||(14772691-14772794)
chr6 (346-452)||(12680213-12680319)
chr6 (322-436)||(18492389-18492503)
chr6 (323-452)||(12205191-12205320)
chr6 (327-452)||(22055622-22055747)
chr6 (326-442)||(12499230-12499346)
chr6 (326-442)||(12506559-12506675)
chr6 (326-442)||(12509555-12509671)
chr6 (368-452)||(14036624-14036708)
chr6 (319-427)||(15509185-15509293)
chr6 (319-442)||(15961409-15961532)
chr6 (327-452)||(11530229-11530354)
chr6 (360-452)||(11431684-11431775)
chr6 (363-451)||(19175823-19175910)
chr6 (319-442)||(10458778-10458901)
chr6 (313-442)||(6065451-6065580)
chr6 (319-444)||(12160849-12160973)
chr6 (320-442)||(11350196-11350315)
chr6 (347-442)||(20692841-20692936)
chr6 (361-446)||(3673177-3673262)
[»] chr1 (74 HSPs)
chr1 (319-452)||(19081732-19081865)
chr1 (319-452)||(19129620-19129753)
chr1 (319-452)||(38531172-38531305)
chr1 (319-452)||(12720813-12720946)
chr1 (319-452)||(6459221-6459354)
chr1 (319-452)||(9109977-9110110)
chr1 (319-452)||(12989856-12989989)
chr1 (319-452)||(14760871-14761004)
chr1 (319-452)||(15243089-15243222)
chr1 (319-452)||(22603552-22603685)
chr1 (319-452)||(29549422-29549555)
chr1 (319-452)||(45839296-45839429)
chr1 (319-455)||(46339447-46339583)
chr1 (321-452)||(16913581-16913712)
chr1 (323-446)||(41120743-41120866)
chr1 (319-446)||(50845332-50845459)
chr1 (319-452)||(13195587-13195720)
chr1 (319-452)||(20408162-20408295)
chr1 (319-452)||(41752437-41752570)
chr1 (319-452)||(52183682-52183815)
chr1 (323-446)||(4340417-4340540)
chr1 (319-442)||(28229457-28229580)
chr1 (319-452)||(6412055-6412188)
chr1 (319-452)||(17200012-17200145)
chr1 (319-456)||(51973424-51973561)
chr1 (324-452)||(9464107-9464235)
chr1 (356-452)||(13523000-13523096)
chr1 (324-452)||(18890556-18890684)
chr1 (319-442)||(46790014-46790137)
chr1 (314-452)||(18894897-18895035)
chr1 (319-452)||(20580913-20581047)
chr1 (346-452)||(41071864-41071970)
chr1 (319-452)||(7830035-7830168)
chr1 (319-452)||(12161818-12161951)
chr1 (319-452)||(22158806-22158939)
chr1 (319-452)||(23457901-23458034)
chr1 (319-452)||(46865247-46865380)
chr1 (319-442)||(19865258-19865381)
chr1 (323-446)||(46785964-46786087)
chr1 (314-452)||(7181552-7181690)
chr1 (319-425)||(25787999-25788105)
chr1 (319-452)||(9985329-9985462)
chr1 (359-452)||(12174808-12174901)
chr1 (323-452)||(17661054-17661183)
chr1 (347-452)||(22789621-22789726)
chr1 (327-456)||(6775887-6776015)
chr1 (319-452)||(9259185-9259318)
chr1 (319-452)||(13102320-13102453)
chr1 (359-452)||(29093596-29093689)
chr1 (327-452)||(30928388-30928513)
chr1 (327-443)||(11917799-11917914)
chr1 (319-447)||(50092300-50092428)
chr1 (319-442)||(8940996-8941119)
chr1 (319-446)||(9177110-9177237)
chr1 (347-450)||(26825246-26825349)
chr1 (347-452)||(32046880-32046985)
chr1 (319-452)||(48522522-48522655)
chr1 (352-424)||(41359020-41359092)
chr1 (319-426)||(13308822-13308929)
chr1 (347-452)||(41063201-41063306)
chr1 (390-452)||(14486705-14486767)
chr1 (358-452)||(16258527-16258621)
chr1 (319-452)||(17733955-17734089)
chr1 (319-452)||(18787915-18788045)
chr1 (319-417)||(27253857-27253955)
chr1 (409-455)||(3786401-3786447)
chr1 (479-533)||(26264296-26264350)
chr1 (379-452)||(12370003-12370076)
chr1 (360-424)||(45918947-45919011)
chr1 (479-534)||(1600247-1600302)
chr1 (347-424)||(9882070-9882144)
chr1 (412-450)||(39040860-39040898)
chr1 (352-426)||(49881074-49881148)
chr1 (347-452)||(52621158-52621263)
[»] chr2 (53 HSPs)
chr2 (313-452)||(13788051-13788190)
chr2 (319-452)||(44722932-44723065)
chr2 (319-451)||(28319581-28319713)
chr2 (319-446)||(37552233-37552360)
chr2 (319-452)||(41637618-41637751)
chr2 (319-452)||(41736172-41736305)
chr2 (324-452)||(1141536-1141664)
chr2 (324-452)||(32300451-32300579)
chr2 (319-452)||(20065076-20065209)
chr2 (319-456)||(27327612-27327749)
chr2 (319-452)||(30783338-30783471)
chr2 (319-446)||(12779606-12779733)
chr2 (319-442)||(43408513-43408636)
chr2 (319-452)||(32008952-32009086)
chr2 (319-452)||(15636737-15636870)
chr2 (319-452)||(18551255-18551388)
chr2 (319-452)||(22140366-22140499)
chr2 (319-452)||(28841344-28841477)
chr2 (320-452)||(28262364-28262496)
chr2 (319-442)||(7093578-7093701)
chr2 (358-452)||(31266354-31266448)
chr2 (322-452)||(37723997-37724127)
chr2 (319-452)||(2556095-2556228)
chr2 (319-452)||(8430296-8430429)
chr2 (319-452)||(21293713-21293846)
chr2 (319-452)||(23388380-23388513)
chr2 (319-452)||(29749405-29749538)
chr2 (319-452)||(32185832-32185965)
chr2 (319-450)||(13613095-13613226)
chr2 (319-434)||(44476377-44476492)
chr2 (314-444)||(36550844-36550973)
chr2 (319-446)||(23857960-23858086)
chr2 (319-446)||(40018808-40018935)
chr2 (319-444)||(14757123-14757248)
chr2 (319-412)||(27039910-27040003)
chr2 (319-452)||(37802381-37802513)
chr2 (322-442)||(38362276-38362396)
chr2 (361-452)||(18916444-18916535)
chr2 (319-442)||(26243323-26243446)
chr2 (327-452)||(44366007-44366132)
chr2 (346-446)||(13134649-13134749)
chr2 (319-452)||(26687692-26687826)
chr2 (379-452)||(27523011-27523084)
chr2 (358-452)||(36373900-36373992)
chr2 (352-452)||(9004343-9004443)
chr2 (319-383)||(22192248-22192312)
chr2 (358-426)||(35697481-35697549)
chr2 (405-452)||(27058404-27058451)
chr2 (409-452)||(16098996-16099039)
chr2 (347-426)||(31966555-31966633)
chr2 (390-452)||(9590470-9590532)
chr2 (347-449)||(18609517-18609619)
chr2 (329-446)||(8763640-8763757)
[»] chr8 (68 HSPs)
chr8 (319-452)||(17103867-17104000)
chr8 (319-452)||(17824618-17824751)
chr8 (318-452)||(9915042-9915175)
chr8 (319-442)||(8824837-8824960)
chr8 (319-446)||(30687944-30688071)
chr8 (314-444)||(27869248-27869378)
chr8 (323-452)||(3823135-3823264)
chr8 (319-452)||(4330980-4331113)
chr8 (319-452)||(4647757-4647890)
chr8 (319-452)||(8555306-8555439)
chr8 (319-452)||(19240869-19241002)
chr8 (319-452)||(19314053-19314186)
chr8 (319-452)||(24576026-24576159)
chr8 (319-452)||(27910766-27910899)
chr8 (319-452)||(27957185-27957318)
chr8 (319-452)||(29345073-29345206)
chr8 (319-442)||(13060933-13061056)
chr8 (319-446)||(19256220-19256347)
chr8 (319-442)||(19488063-19488186)
chr8 (314-452)||(18010057-18010195)
chr8 (319-437)||(25655860-25655978)
chr8 (319-452)||(6817056-6817189)
chr8 (319-452)||(32961661-32961794)
chr8 (319-452)||(43431561-43431694)
chr8 (319-446)||(11938753-11938879)
chr8 (319-442)||(32247921-32248044)
chr8 (319-452)||(17810300-17810433)
chr8 (319-452)||(21350480-21350613)
chr8 (319-444)||(22939323-22939448)
chr8 (319-452)||(33652569-33652702)
chr8 (346-442)||(26399036-26399132)
chr8 (316-452)||(37992101-37992237)
chr8 (319-446)||(25000433-25000560)
chr8 (319-452)||(6816385-6816518)
chr8 (319-448)||(15251608-15251736)
chr8 (319-452)||(24193198-24193331)
chr8 (323-442)||(23752292-23752411)
chr8 (319-442)||(25273330-25273452)
chr8 (319-446)||(30466956-30467083)
chr8 (319-442)||(31399510-31399633)
chr8 (319-452)||(29350925-29351059)
chr8 (319-452)||(16061941-16062074)
chr8 (327-452)||(31344182-31344307)
chr8 (346-446)||(5670198-5670298)
chr8 (319-446)||(24636660-24636788)
chr8 (314-452)||(18844541-18844679)
chr8 (323-451)||(6084252-6084378)
chr8 (319-451)||(9631406-9631539)
chr8 (319-452)||(40289423-40289555)
chr8 (323-452)||(3692176-3692306)
chr8 (358-452)||(5879206-5879300)
chr8 (352-424)||(19493690-19493762)
chr8 (319-427)||(21219242-21219350)
chr8 (319-403)||(42700659-42700743)
chr8 (319-421)||(8789873-8789975)
chr8 (314-442)||(33412974-33413095)
chr8 (319-423)||(10917858-10917962)
chr8 (314-446)||(17003270-17003402)
chr8 (324-442)||(14304241-14304359)
chr8 (319-397)||(25274654-25274732)
chr8 (477-534)||(44595810-44595867)
chr8 (393-444)||(24479874-24479925)
chr8 (479-534)||(43594273-43594328)
chr8 (346-413)||(2265407-2265474)
chr8 (479-534)||(27750796-27750851)
chr8 (477-524)||(30241130-30241177)
chr8 (347-426)||(41527730-41527809)
chr8 (477-534)||(11492028-11492085)
[»] chr5 (56 HSPs)
chr5 (319-452)||(20959512-20959645)
chr5 (323-452)||(25652589-25652718)
chr5 (323-452)||(11927792-11927921)
chr5 (319-452)||(16121841-16121974)
chr5 (319-452)||(17039633-17039766)
chr5 (319-452)||(33818563-33818696)
chr5 (319-452)||(36196398-36196531)
chr5 (313-452)||(17036408-17036547)
chr5 (323-452)||(618298-618427)
chr5 (319-456)||(2472716-2472853)
chr5 (319-452)||(8886853-8886986)
chr5 (319-442)||(746870-746993)
chr5 (314-452)||(10420249-10420387)
chr5 (319-452)||(12045731-12045864)
chr5 (319-448)||(13620129-13620258)
chr5 (323-456)||(35620350-35620482)
chr5 (319-442)||(38837673-38837796)
chr5 (319-452)||(23408984-23409118)
chr5 (326-452)||(23975639-23975765)
chr5 (319-452)||(7888801-7888934)
chr5 (319-452)||(8108862-8108995)
chr5 (319-456)||(28265477-28265614)
chr5 (327-448)||(32726736-32726857)
chr5 (319-452)||(36831892-36832025)
chr5 (319-442)||(4125190-4125313)
chr5 (319-442)||(10494751-10494874)
chr5 (319-446)||(26708587-26708714)
chr5 (319-446)||(26978321-26978448)
chr5 (319-448)||(16472183-16472312)
chr5 (319-452)||(12328228-12328361)
chr5 (319-452)||(15060977-15061110)
chr5 (327-452)||(27428022-27428147)
chr5 (319-434)||(16631876-16631991)
chr5 (319-442)||(25397790-25397913)
chr5 (319-456)||(5982645-5982783)
chr5 (319-452)||(7003732-7003863)
chr5 (320-442)||(35778155-35778277)
chr5 (319-452)||(23423758-23423891)
chr5 (319-452)||(36716202-36716335)
chr5 (319-442)||(36597342-36597465)
chr5 (358-452)||(17079409-17079503)
chr5 (359-452)||(33816800-33816893)
chr5 (327-446)||(3080706-3080825)
chr5 (327-446)||(20187951-20188070)
chr5 (323-446)||(24138847-24138970)
chr5 (319-442)||(40484058-40484181)
chr5 (319-452)||(13974080-13974213)
chr5 (319-442)||(17771970-17772093)
chr5 (319-426)||(33734975-33735082)
chr5 (347-452)||(25673259-25673363)
chr5 (394-456)||(22649406-22649468)
chr5 (360-452)||(18413560-18413652)
chr5 (342-441)||(31853112-31853212)
chr5 (347-423)||(23974606-23974682)
chr5 (479-534)||(43442262-43442317)
chr5 (399-452)||(29727928-29727981)
[»] chr4 (60 HSPs)
chr4 (319-452)||(22128314-22128447)
chr4 (319-448)||(8878889-8879018)
chr4 (319-452)||(30268990-30269123)
chr4 (319-452)||(30283066-30283199)
chr4 (319-452)||(32175739-32175872)
chr4 (319-452)||(55309214-55309348)
chr4 (319-448)||(16915375-16915504)
chr4 (319-452)||(27040027-27040160)
chr4 (319-452)||(46286231-46286364)
chr4 (319-451)||(19839182-19839314)
chr4 (319-442)||(30507999-30508122)
chr4 (321-452)||(38223512-38223643)
chr4 (319-452)||(9913260-9913393)
chr4 (327-452)||(25147723-25147848)
chr4 (319-446)||(4586760-4586887)
chr4 (319-452)||(5473851-5473984)
chr4 (319-456)||(19680426-19680563)
chr4 (319-452)||(22168270-22168403)
chr4 (326-442)||(29625337-29625453)
chr4 (319-442)||(7111948-7112071)
chr4 (319-442)||(9670481-9670604)
chr4 (319-446)||(18714910-18715037)
chr4 (323-446)||(25026565-25026688)
chr4 (319-442)||(38645762-38645885)
chr4 (319-452)||(2275679-2275813)
chr4 (322-452)||(37378628-37378758)
chr4 (319-452)||(1638449-1638582)
chr4 (319-452)||(5399611-5399744)
chr4 (319-452)||(13564917-13565050)
chr4 (319-452)||(33914061-33914194)
chr4 (323-452)||(45532585-45532714)
chr4 (324-452)||(18051841-18051969)
chr4 (319-451)||(36689680-36689812)
chr4 (319-446)||(13028818-13028945)
chr4 (319-442)||(38619859-38619982)
chr4 (319-446)||(54539294-54539421)
chr4 (319-452)||(24682329-24682460)
chr4 (319-456)||(44783480-44783618)
chr4 (319-446)||(4627080-4627207)
chr4 (319-442)||(42055409-42055532)
chr4 (319-437)||(9238627-9238745)
chr4 (323-452)||(12071964-12072093)
chr4 (319-437)||(9058954-9059072)
chr4 (374-452)||(22156658-22156736)
chr4 (319-456)||(25225097-25225232)
chr4 (389-455)||(37761914-37761980)
chr4 (346-442)||(9239310-9239406)
chr4 (324-448)||(30568006-30568130)
chr4 (347-426)||(313615-313694)
chr4 (319-442)||(4606831-4606954)
chr4 (323-442)||(12105995-12106113)
chr4 (347-442)||(14944758-14944853)
chr4 (347-452)||(18744100-18744205)
chr4 (360-452)||(3612997-3613089)
chr4 (347-426)||(6553832-6553911)
chr4 (319-448)||(29238429-29238558)
chr4 (360-452)||(39234944-39235034)
chr4 (319-446)||(30420035-30420162)
chr4 (347-446)||(34557191-34557290)
chr4 (319-426)||(23104376-23104484)
[»] chr3 (90 HSPs)
chr3 (319-452)||(27449088-27449221)
chr3 (319-456)||(29956368-29956505)
chr3 (319-456)||(30005523-30005660)
chr3 (320-452)||(1628215-1628347)
chr3 (319-452)||(5260937-5261070)
chr3 (319-452)||(9652578-9652711)
chr3 (319-452)||(11085344-11085477)
chr3 (320-452)||(28389973-28390105)
chr3 (319-442)||(26098823-26098946)
chr3 (319-446)||(48404866-48404993)
chr3 (323-452)||(19269870-19269999)
chr3 (319-452)||(19610338-19610471)
chr3 (347-452)||(27212811-27212916)
chr3 (314-446)||(13921331-13921463)
chr3 (319-442)||(13905040-13905163)
chr3 (319-442)||(21490036-21490159)
chr3 (319-452)||(7623533-7623666)
chr3 (319-452)||(8110339-8110472)
chr3 (319-452)||(11007685-11007818)
chr3 (319-452)||(11915758-11915891)
chr3 (319-452)||(16299861-16299994)
chr3 (319-452)||(18104532-18104665)
chr3 (319-452)||(19223449-19223582)
chr3 (323-452)||(25882570-25882699)
chr3 (319-452)||(26390636-26390769)
chr3 (319-452)||(46942487-46942620)
chr3 (324-452)||(18539804-18539932)
chr3 (319-442)||(5565732-5565855)
chr3 (319-446)||(21816727-21816854)
chr3 (319-442)||(43329765-43329888)
chr3 (319-452)||(1310961-1311094)
chr3 (319-452)||(11219138-11219271)
chr3 (319-456)||(11837216-11837353)
chr3 (347-452)||(17582331-17582436)
chr3 (319-452)||(18091549-18091682)
chr3 (319-452)||(23217210-23217343)
chr3 (319-452)||(31250088-31250221)
chr3 (319-452)||(31433737-31433870)
chr3 (319-452)||(36543749-36543882)
chr3 (360-452)||(26830485-26830577)
chr3 (319-442)||(5744426-5744549)
chr3 (319-442)||(5781385-5781508)
chr3 (319-442)||(17269606-17269729)
chr3 (319-437)||(10941667-10941785)
chr3 (319-452)||(8428171-8428304)
chr3 (319-452)||(17762642-17762775)
chr3 (319-452)||(18380024-18380157)
chr3 (319-452)||(19063962-19064095)
chr3 (347-452)||(19545510-19545615)
chr3 (319-448)||(27968919-27969048)
chr3 (319-452)||(29215992-29216125)
chr3 (319-452)||(30219338-30219471)
chr3 (327-452)||(49915451-49915576)
chr3 (324-452)||(4393357-4393485)
chr3 (319-442)||(15063994-15064117)
chr3 (319-442)||(23773487-23773610)
chr3 (323-446)||(29236050-29236173)
chr3 (319-442)||(46012730-46012853)
chr3 (319-452)||(15490035-15490167)
chr3 (319-452)||(21020065-21020198)
chr3 (319-452)||(36564441-36564574)
chr3 (319-442)||(1745490-1745612)
chr3 (319-442)||(3461312-3461435)
chr3 (358-452)||(20615384-20615478)
chr3 (326-452)||(29704041-29704167)
chr3 (319-432)||(8546265-8546378)
chr3 (319-412)||(20761952-20762045)
chr3 (347-446)||(28859597-28859696)
chr3 (327-442)||(50665646-50665761)
chr3 (323-452)||(8543469-8543597)
chr3 (319-451)||(10803721-10803854)
chr3 (319-415)||(6447248-6447344)
chr3 (327-446)||(21088758-21088875)
chr3 (327-426)||(37283549-37283648)
chr3 (319-446)||(47263267-47263394)
chr3 (347-437)||(6718725-6718815)
chr3 (319-446)||(10772055-10772183)
chr3 (319-442)||(6088230-6088353)
chr3 (394-456)||(26963326-26963388)
chr3 (346-447)||(29451099-29451200)
chr3 (319-452)||(27182660-27182791)
chr3 (360-452)||(20088400-20088492)
chr3 (481-520)||(29186517-29186556)
chr3 (399-446)||(35579607-35579654)
chr3 (347-426)||(50240772-50240851)
chr3 (479-534)||(52769938-52769993)
chr3 (323-440)||(13615427-13615544)
chr3 (477-534)||(7973620-7973677)
chr3 (479-532)||(26988215-26988268)
chr3 (341-418)||(27711192-27711269)
[»] scaffold0576 (1 HSPs)
scaffold0576 (319-452)||(9231-9364)
[»] scaffold0007 (4 HSPs)
scaffold0007 (319-452)||(3746-3879)
scaffold0007 (319-452)||(202778-202911)
scaffold0007 (390-452)||(276207-276269)
scaffold0007 (319-384)||(274667-274732)
[»] scaffold0014 (1 HSPs)
scaffold0014 (319-446)||(22221-22348)
[»] scaffold0603 (1 HSPs)
scaffold0603 (319-452)||(5981-6114)
[»] scaffold0219 (1 HSPs)
scaffold0219 (319-452)||(19607-19740)
[»] scaffold0076 (1 HSPs)
scaffold0076 (319-452)||(26487-26620)
[»] scaffold0006 (2 HSPs)
scaffold0006 (319-452)||(120989-121122)
scaffold0006 (321-442)||(84678-84799)
[»] scaffold0184 (1 HSPs)
scaffold0184 (320-456)||(7456-7592)
[»] scaffold0128 (1 HSPs)
scaffold0128 (322-446)||(10668-10792)
[»] scaffold0599 (1 HSPs)
scaffold0599 (319-452)||(7509-7642)
[»] scaffold0001 (3 HSPs)
scaffold0001 (319-452)||(84307-84440)
scaffold0001 (322-452)||(8115-8245)
scaffold0001 (322-452)||(21847-21977)
[»] scaffold0717 (1 HSPs)
scaffold0717 (319-452)||(920-1054)
[»] scaffold0069 (1 HSPs)
scaffold0069 (322-452)||(10162-10292)
[»] scaffold0047 (1 HSPs)
scaffold0047 (319-452)||(58586-58719)
[»] scaffold0058 (1 HSPs)
scaffold0058 (312-452)||(74536-74676)
[»] scaffold0240 (1 HSPs)
scaffold0240 (319-446)||(14992-15119)
[»] scaffold0009 (3 HSPs)
scaffold0009 (319-442)||(182544-182667)
scaffold0009 (319-444)||(219648-219773)
scaffold0009 (319-396)||(215665-215742)
[»] scaffold0108 (1 HSPs)
scaffold0108 (319-452)||(12657-12789)
[»] scaffold0087 (1 HSPs)
scaffold0087 (319-452)||(37789-37922)
[»] scaffold0062 (1 HSPs)
scaffold0062 (319-452)||(43921-44054)
[»] scaffold0023 (1 HSPs)
scaffold0023 (319-452)||(39705-39838)
[»] scaffold0655 (1 HSPs)
scaffold0655 (323-452)||(3168-3295)
[»] scaffold0002 (1 HSPs)
scaffold0002 (319-442)||(439977-440100)
[»] scaffold0161 (1 HSPs)
scaffold0161 (320-450)||(6801-6931)
[»] scaffold0035 (1 HSPs)
scaffold0035 (320-426)||(74720-74826)
[»] scaffold0502 (1 HSPs)
scaffold0502 (327-452)||(10896-11021)
[»] scaffold0284 (1 HSPs)
scaffold0284 (347-426)||(1549-1628)
[»] scaffold0011 (1 HSPs)
scaffold0011 (319-405)||(17619-17705)
[»] scaffold0019 (1 HSPs)
scaffold0019 (323-444)||(173456-173578)
[»] scaffold0554 (1 HSPs)
scaffold0554 (319-384)||(9882-9947)
[»] scaffold0300 (1 HSPs)
scaffold0300 (477-534)||(4404-4461)
[»] scaffold0114 (1 HSPs)
scaffold0114 (347-426)||(36332-36411)


Alignment Details
Target: chr7 (Bit Score: 141; Significance: 1e-73; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 515 - 714
Target Start/End: Complemental strand, 5716620 - 5716420
Alignment:
Q  515 aatttagtttcttcaaaaaacaagggtgaaatcaatccagtgtcatcaattgtggattgcaaaccatgcaagaaatccaaaaatctaccattttaagcca 614  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  5716620 aatttagcttcttcaaaaaacaagggtgagatcaatccagtgtcatcgattgtggattgcaaaccatggcagaaatccaaaaatctaccattttaagcca 5716521  T
Q  615 ccatatcggccataaaatggcatggcgccgccataagttatttaa-aaattaagaccttggagtgtttctcttaaaatctcaggttcgatcctccttgtg 713  Q
    | ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| | |||  || |||||| ||||||||||||||||    
T  5716520 caatatcggccataaaatggcatggcgccgccataagttatttaacaacttaagaccttggagtgtgtttctctaagtctcagattcgatcctccttgtg 5716421  T
Q  714 t 714  Q
    |    
T  5716420 t 5716420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 319 - 456
Target Start/End: Complemental strand, 27130469 - 27130334
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||  ||||    
T  27130469 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaatataaaatgcctcacaaattcgttaatcgcaaaagttagtgacggaatt--agag 27130372  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
    ||||||||||||||||||||||||||||||||||||||    
T  27130371 ggatttcacattttccctctctaaatttccctcattaa 27130334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 178 - 306
Target Start/End: Complemental strand, 5716780 - 5716652
Alignment:
Q  178 tgtgatctataaacaattaattttatgaaactcatgagtatcatactatcaaagacaatcttgttttaaaactacaaaataacaagcgtgagatcatatt 277  Q
    |||||||||||||||||||||||||||||||||| | |||||||| ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||    
T  5716780 tgtgatctataaacaattaattttatgaaactcaagggtatcatattatcaaagacagtcttgtttaaaaactacaaaataacaagggtgagatcatatt 5716681  T
Q  278 gatttgggacttaggagtgtgctccttct 306  Q
    |  |||||| |||||||||||||||||||    
T  5716680 ggcttgggatttaggagtgtgctccttct 5716652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 22486531 - 22486398
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  22486531 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 22486432  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| |||||| || ||||||||||||||    
T  22486431 ggatttcacgttttccgtcactaaatttccctca 22486398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 314 - 452
Target Start/End: Original strand, 15014402 - 15014540
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| ||||||||||||| |||||| | ||| |||||  |||| |||||||||||||| |||||||||||| |||||||||||| |||||||| ||||||    
T  15014402 ttacactactagaaaaagtaaaattagcgagggaaattggtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttagtgacggaatta 15014501  T
Q  414 gagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||  ||||||||| |||||| |||||||    
T  15014502 gagagggatttcatgttttccctcactaaatatccctca 15014540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 21917336 - 21917469
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  21917336 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 21917435  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| |||||| |||||||    
T  21917436 ggattttacgttttccctcactaaatgtccctca 21917469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 23232176 - 23232043
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||| ||    
T  23232176 ctactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagaaag 23232077  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  23232076 ggatttcatgttttccctcactaaatatccctca 23232043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 23577191 - 23577324
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||  | ||||||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||| ||    
T  23577191 ctactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagatag 23577290  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| ||||||||||||||    
T  23577291 ggatttcacgttttccctcactaaatttccctca 23577324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 333 - 452
Target Start/End: Complemental strand, 31042374 - 31042255
Alignment:
Q  333 aaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacatttt 432  Q
    |||||| |||||  |||| ||| ||||||||||||||||  ||||||||||| || ||||||||| ||||||||||||||||||||||||||||| ||||    
T  31042374 aaaattagagaggaaaattagttatggaaaaaataaaatttctcacaaattccttggtcgcaaaatttagtgacagaattagagagggatttcacgtttt 31042275  T
Q  433 ccctctctaaatttccctca 452  Q
    ||||||||||| ||||||||    
T  31042274 ccctctctaaaattccctca 31042255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 1843031 - 1842898
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||| |||    
T  1843031 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagggag 1842932  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  1842931 ggattttacgttttccctcactaaatttccctca 1842898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 18217966 - 18217833
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||||||||  ||||||||||    
T  18217966 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgaaattagagag 18217867  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || |||| |||| ||||||||||||||    
T  18217866 ggattttacgtttttcctcactaaatttccctca 18217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 23750738 - 23750871
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || |||| |||| |||||||| |||||||||||    
T  23750738 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgtaaaatttagtgacggaattagagag 23750837  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| |||||||||||| ||||||||||||||    
T  23750838 ggattttacattttccctcactaaatttccctca 23750871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 323 - 452
Target Start/End: Original strand, 31425517 - 31425646
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||||||    
T  31425517 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctgtggtcgcaaaatttagtgacggaattagagagggat 31425616  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    || || ||||||||| ||||||||||||||    
T  31425617 tttacgttttccctcactaaatttccctca 31425646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 347 - 456
Target Start/End: Complemental strand, 38057741 - 38057632
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| |||||||||||||||||||| |||||||||||| || ||||||||  |||||||| |||||| ||||||||||||| ||||||||| ||||||||    
T  38057741 aaattagtgatggaaaaaataaaattcctcacaaattccttggtcgcaaagtttagtgacggaattaaagagggatttcacgttttccctcgctaaattt 38057642  T
Q  447 ccctcattaa 456  Q
    ||||||||||    
T  38057641 ccctcattaa 38057632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 319 - 451
Target Start/End: Original strand, 6849213 - 6849345
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||| ||||| |||| |||||||||||| |||||||||||| |||||||| |||||||||||    
T  6849213 ctactagaaaaagcaaaattagcgagggaaattagtgacggagaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagag 6849312  T
Q  419 ggatttcacattttccctctctaaatttccctc 451  Q
     ||||| || |||| |||| |||||||||||||    
T  6849313 agattttacgttttacctcactaaatttccctc 6849345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 5716854 - 5716923
Alignment:
Q  56 actatataatccatcacatgagtttatttagaaatacagtcctaaattctaatgatataaaaattgctat 125  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5716854 actatataatccattacatgagtttatttagaaatacagtcctaaattctaatgatataaaaattgctat 5716923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 11036644 - 11036511
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  11036644 ctactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 11036545  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  11036544 ggatttcacgttttccctcacaaaatttccctca 11036511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 448
Target Start/End: Original strand, 20923960 - 20924089
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| ||||||   ||| ||||| ||||||||||||||||||||  || ||||||| ||| ||| ||||| ||||||||||||||||||||    
T  20923960 ctactagaaaaagtaaaattatggagggaaattagtgatggaaaaaataaaatctcttacaaatttgttggtcacaaaatttagtgacagaattagagag 20924059  T
Q  419 ggatttcacattttccctctctaaatttcc 448  Q
    ||||||||  ||||||||| ||||||||||    
T  20924060 ggatttcatgttttccctcactaaatttcc 20924089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 23699827 - 23699960
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| ||||||||||||||| ||||    
T  23699827 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacagaattaaagag 23699926  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||||||||| | ||||||| ||||    
T  23699927 ggatttcacattttccctcacaaaatttctctca 23699960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 24605975 - 24605842
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||  | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  24605975 ctactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 24605876  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||| ||||||||| |||||||| |||||    
T  24605875 agatttcacgttttccctcactaaattttcctca 24605842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 27806155 - 27806022
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  27806155 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagag 27806056  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  27806055 ggatttcatgttttccctcactaaatatccctca 27806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 28801015 - 28800882
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| |||||  |||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  28801015 ctactagaaaaagcaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 28800916  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  28800915 ggatttcatgttttccctcactaaatatccctca 28800882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 47523652 - 47523785
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||  |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  47523652 ctactagaaaaaataaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 47523751  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  47523752 ggatttcatgttttccctcactaaatatccctca 47523785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 317 - 452
Target Start/End: Complemental strand, 32267485 - 32267351
Alignment:
Q  317 cgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagag 416  Q
    ||||||||||||| |||||||| | ||| || || ||||| ||||||| |||||| |||||||||||  ||  |||||||| ||||||||||||||||||    
T  32267485 cgctactagaaaatgcaaaattagggagggagattagtgacggaaaaa-taaaatccctcacaaatttcttgatcgcaaaatttagtgacagaattagag 32267387  T
Q  417 agggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  | ||||||||||||||||||||||||    
T  32267386 agggattttgcgttttccctctctaaatttccctca 32267351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 319 - 437
Target Start/End: Complemental strand, 23539369 - 23539251
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  ||||||||||| ||| |||| |||||||||||    
T  23539369 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatagtcgcaaaatttaatgacggaattagagag 23539270  T
Q  419 ggatttcacattttccctc 437  Q
    ||||||||| | |||||||    
T  23539269 ggatttcacgtattccctc 23539251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 816193 - 816326
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||| |||||| |||| || | ||| ||||| ||||| |||||||| |||||  ||||||||||| || ||||||||| |||||||| |||||||||||    
T  816193 ctactggaaaaaacaaatttagggagggaaattagtgacggaaaaaacaaaatctctcacaaattctttggtcgcaaaatttagtgacggaattagagag 816292  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| |||||| ||||||||||| |||||    
T  816293 ggatttcacgttttccatctctaaattttcctca 816326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 1907492 - 1907359
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| ||||| ||||| |||||||||||||| ||||||| |||| || ||||||||| ||||||||  ||||||||||    
T  1907492 ctactaggaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaatccctcacatattctttggtcgcaaaatttagtgacgaaattagagag 1907393  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||| |||| |||||    
T  1907392 ggatttcatgttttccctcactagattttcctca 1907359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 7733314 - 7733447
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||| ||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||| ||| |||||||||||    
T  7733314 ctactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagagacggaattagagag 7733413  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  |||| |||| |||||| |||||||    
T  7733414 ggatttcatgttttacctcactaaatatccctca 7733447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 327 - 452
Target Start/End: Complemental strand, 20174149 - 20174024
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||||||||||    
T  20174149 aaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttca 20174050  T
Q  427 cattttccctctctaaatttccctca 452  Q
    | ||||||||| | ||||||||||||    
T  20174049 cgttttccctcacaaaatttccctca 20174024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 37135287 - 37135420
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| ||||| ||||||  | |||| |||| |||||||| |||||||||||    
T  37135287 ctactagaaaaaacaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcataaattccatggtcgtaaaatttagtgacggaattagagag 37135386  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  37135387 ggatttcacgttttccctcacaaaatttccctca 37135420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 327 - 452
Target Start/End: Original strand, 39979634 - 39979759
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| ||| |||| |||||||||||||||||||    
T  39979634 aaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagagagggatttca 39979733  T
Q  427 cattttccctctctaaatttccctca 452  Q
      ||||||||| ||||||||||||||    
T  39979734 tgttttccctcactaaatttccctca 39979759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 40847437 - 40847570
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| ||||| |||||| | ||| |||||  |||| |||||| ||||||| | |||||||||| || ||||||||| |||||||| |||||||||||    
T  40847437 ctactaggaaaagtaaaattagggagggaaatttgtgacggaaaacataaaattcgtcacaaattctttggtcgcaaaatttagtgacggaattagagag 40847536  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  40847537 ggatttcatgttttccctcactaaatttccctca 40847570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 3872189 - 3872312
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  3872189 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtctcaaaatttagtgacggaattagagag 3872288  T
Q  419 ggatttcacattttccctctctaa 442  Q
     ||||| || ||||||||| ||||    
T  3872289 agattttacgttttccctcactaa 3872312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 3904480 - 3904603
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||| ||||||  || ||||||||| |||||||| |||||||||||    
T  3904480 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcgcaaatttcttggtcgcaaaatttagtgacggaattagagag 3904579  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  3904580 ggattttacgttttccctcactaa 3904603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 9698540 - 9698673
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||| ||| |||| | |||||||||| || |||  |||| |||||||| |||||||||||    
T  9698540 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaataatgaaattcatcacaaattccttggtcataaaatttagtgacggaattagagag 9698639  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | |||| || ||||||||| ||||||||||||||    
T  9698640 gaattttacgttttccctcactaaatttccctca 9698673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 10050866 - 10050971
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| ||||||||||||||||| || ||||||||| ||||||||    
T  10050866 aaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaattt 10050965  T
Q  447 ccctca 452  Q
    ||||||    
T  10050966 ccctca 10050971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 326 - 443
Target Start/End: Complemental strand, 11852138 - 11852021
Alignment:
Q  326 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 425  Q
    ||||||||||||| | |||||||||  ||||  |||||||||||||| ||||||||||| || ||| ||||| |||||||| |||||||||| |||||||    
T  11852138 aaaaagcaaaattagggagagaaatttgtgacagaaaaaataaaatgtctcacaaattctttggtcacaaaatttagtgacggaattagagaaggatttc 11852039  T
Q  426 acattttccctctctaaa 443  Q
    |  |||||||||||||||    
T  11852038 aggttttccctctctaaa 11852021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 20429602 - 20429469
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||    || ||||| ||||| ||||||||| |||| |||||||||||   | |||| |||| |||||||| |||||||||||    
T  20429602 ctactagaaaaagcaaaattaacaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgtaaaatttagtgacggaattagagag 20429503  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  20429502 ggatttcacgttttccctcacaaaatttccctca 20429469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 22501703 - 22501598
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| ||||||||||||||   |||||||||| || | ||||||| ||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  22501703 aaattagtgacggaaaaaataaaatctttcacaaattctttggccgcaaaatttaatgacggaattagagagggatttcacgttttccctctctaaattt 22501604  T
Q  447 ccctca 452  Q
    ||||||    
T  22501603 ccctca 22501598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 48933269 - 48933140
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | |||  |||| ||||| |||||||||||||| ||||||||||||  | ||||||||| |||||||| |||||||||||| ||    
T  48933269 tagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagaggaat 48933170  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    ||||| ||||  ||| | ||||||||||||    
T  48933169 ttcacgttttttctcacaaaatttccctca 48933140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 1824202 - 1824325
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  1824202 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 1824301  T
Q  419 ggatttcacattttccctctctaa 442  Q
    | |||||| |||||||||| ||||    
T  1824302 gaatttcatattttccctcactaa 1824325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 4514902 - 4514779
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| |||||||  ||||||||||| || ||||||||| |||||||  |||||||||||    
T  4514902 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaatttctcacaaattctttggtcgcaaaatttagtgaaggaattagagag 4514803  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||||| |||||||||| ||||    
T  4514802 ggatttcatattttccctcactaa 4514779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 21623157 - 21623031
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||  | ||| ||||| ||||| ||||||||| |||| |||||||||||| || | ||||||| |||||||  |||||||||||    
T  21623157 ctactagaaaaagcaaaata-gcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgggcgcaaaatttagtgatggaattagagag 21623059  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || ||||||||| ||||||||    
T  21623058 ggattttacgttttccctcactaaattt 21623031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 353 - 452
Target Start/End: Complemental strand, 36636609 - 36636510
Alignment:
Q  353 gtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||||||||||  ||||||||| |||||||| |||||    
T  36636609 gtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatttgcctca 36636510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 27132723 - 27132856
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| ||||| |||||  || | |||||||||||||| | ||||||||| ||| || |||||| ||||||||||||||||||||    
T  27132723 ctactagaaaaagtaaaattagagagggaaattggtaacggaaaaaataaaatccatcacaaatttgtttgttgcaaaatttagtgacagaattagagag 27132822  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
      ||||| | |||| ||||||  |||||||||||    
T  27132823 atatttcgcgtttttcctctcacaatttccctca 27132856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 448
Target Start/End: Complemental strand, 36993957 - 36993828
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  ||||||||||| ||||||| |||||||||||  ||||||| |||| |||||||| |||||||| ||    
T  36993957 ctactaggaaaagcaaaattagggagggaaatttgtgatggaaaatataaaattcctcacaaatttcttagtcgtaaaatttagtgacggaattagaaag 36993858  T
Q  419 ggatttcacattttccctctctaaatttcc 448  Q
     |||||||  |||| |||| ||||||||||    
T  36993857 agatttcatgtttttcctcactaaatttcc 36993828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 2650830 - 2650948
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||| | ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  2650830 ctactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 2650929  T
Q  419 ggatttcacattttccctc 437  Q
    |||||| || |||||||||    
T  2650930 ggattttacgttttccctc 2650948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 42926421 - 42926555
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    ||||||||||||  |||||| | |||  |||| ||||| |||||||| | |||| |||||||||||  |||||||||||| |||||||| ||||||||||    
T  42926421 ctactagaaaaaataaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcacaaatttcttagtcgcaaaatttagtgacggaattagaga 42926520  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||  |||| |||| |||||| |||||||    
T  42926521 gggatttcatgtttttcctcactaaatatccctca 42926555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 359 - 452
Target Start/End: Complemental strand, 45664865 - 45664772
Alignment:
Q  359 gaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||| |||| |||||||||||| ||  |||||||| |||||||| ||||||||||||||||| || ||||||||| ||| ||||||||||    
T  45664865 gaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagagagggattttacgttttccctcactatatttccctca 45664772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 321 - 452
Target Start/End: Complemental strand, 2457803 - 2457674
Alignment:
Q  321 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 420  Q
    ||||| |||||||||||| | ||| ||||| |||||  ||||| |||||||  ||||||||||| || ||||||||| |||||||| ||||| |||||||    
T  2457803 actaggaaaagcaaaattagggagggaaattagtgacagaaaatataaaat--ctcacaaattcttttgtcgcaaaatttagtgacggaatttgagaggg 2457706  T
Q  421 atttcacattttccctctctaaatttccctca 452  Q
    ||||||  ||||||||| | |||||| |||||    
T  2457705 atttcatgttttccctcacaaaattttcctca 2457674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 21871705 - 21871576
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | |||  |||||||||  ||||||||| |||| |||||||||||  || ||||||||| |||||||| ||||||||       
T  21871705 ctactagaaaaaacaaaattagcgaggaaaatcagtggcggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaga--- 21871609  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||||| |||||||||||| |||||||| |||||    
T  21871608 -gattttacattttccctcactaaattttcctca 21871576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 456
Target Start/End: Original strand, 25777157 - 25777251
Alignment:
Q  362 aaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctcattaa 456  Q
    |||||||||| |||||||||||  ||  ||| |||| |||||||   |||||||||| |||||||| ||||||||||||||||||||||||||||    
T  25777157 aaaataaaatccctcacaaattttttgatcgtaaaatttagtgatgaaattagagagtgatttcacgttttccctctctaaatttccctcattaa 25777251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 326 - 452
Target Start/End: Complemental strand, 26415554 - 26415428
Alignment:
Q  326 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 425  Q
    |||||| |||||| ||||  ||||| ||||||||||||||||||||  ||||||||||  ||  ||| |||| ||||||||  ||||| ||||||||||     
T  26415554 aaaaagtaaaattagagaaggaaattagtgatggaaaaaataaaatttctcacaaattttttgatcgtaaaatttagtgacgaaattaaagagggatttt 26415455  T
Q  426 acattttccctctctaaatttccctca 452  Q
    || |||| |||||||||| ||||||||    
T  26415454 acgtttttcctctctaaaattccctca 26415428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 353 - 442
Target Start/End: Complemental strand, 26577368 - 26577279
Alignment:
Q  353 gtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 442  Q
    |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| | |||||||||||||||||  ||||||||| ||||    
T  26577368 gtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggtattagagagggatttcatgttttccctcactaa 26577279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 319 - 456
Target Start/End: Complemental strand, 33427826 - 33427690
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| |||||   ||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  33427826 ctactagaaaaaacaaaattagcgagggaaattagtgacc-aaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagag 33427728  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
    | ||||||  ||||||||| |||| | ||||| |||||    
T  33427727 gaatttcatgttttccctcactaagtatcccttattaa 33427690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 321 - 427
Target Start/End: Complemental strand, 27305005 - 27304899
Alignment:
Q  321 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 420  Q
    ||||| |||| ||||||| | ||| ||||| |||||  ||||||||||||| || ||||||||| || | ||||||| |||||||| |||||||||||||    
T  27305005 actaggaaaaacaaaattagggagggaaattagtgacagaaaaaataaaatcccccacaaattccttggccgcaaaatttagtgacggaattagagaggg 27304906  T
Q  421 atttcac 427  Q
    || ||||    
T  27304905 atgtcac 27304899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 379 - 452
Target Start/End: Complemental strand, 687954 - 687881
Alignment:
Q  379 aaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||  ||||||||||||||||||| |||||| |||||||||||| ||||||||| ||||    
T  687954 aaattcctttgtcgcaaagtttagtgacagaattagagaaggattttacattttccctcactaaatttctctca 687881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 11890177 - 11890282
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| |||||||||||||| ||||| |||||| || ||| ||||| ||||||||  | |||| ||||||| ||| |||||||||| ||||||||    
T  11890177 aaattagtgacggaaaaaataaaatccctcataaattctttggtctcaaaatttagtgacgaagttagcgagggatatcatattttccctcactaaattt 11890276  T
Q  447 ccctca 452  Q
     |||||    
T  11890277 tcctca 11890282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 24140587 - 24140454
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| ||||| |||||| | |||  ||||  |||| |||||| ||||||| |||||||||||| || |||| |||| ||| |||| ||||| ||||     
T  24140587 ctactaggaaaagtaaaattagggaggaaaatttgtgacggaaaatataaaattcctcacaaattctttggtcgtaaaatttaatgacggaattggagaa 24140488  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| |  ||||||||| ||||||||||||||    
T  24140487 ggattttatgttttccctcactaaatttccctca 24140454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 314 - 450
Target Start/End: Original strand, 14786632 - 14786768
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| ||| |||||||| ||||||| | |||  |||| |||||  |||||||| |||| |||||||||||  || ||||||||| |||||||| ||||||    
T  14786632 ttacactattagaaaaaacaaaattagtgaggaaaattagtgacagaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggaatta 14786731  T
Q  414 gagagggatttcacattttccctctctaaatttccct 450  Q
     | ||| |||| || |||||||||  |||||||||||    
T  14786732 aaaaggaattttacgttttccctcgttaaatttccct 14786768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 444
Target Start/End: Complemental strand, 15969922 - 15969796
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    ||||||||||||| ||||||   ||| || || ||||| |||||||| | ||||  ||||||||||| || |||| |||| |||||||| ||||||||||    
T  15969922 ctactagaaaaagtaaaattaatgagggatattagtgacggaaaaaaatgaaatttctcacaaattctttggtcgtaaaatttagtgacggaattagaga 15969823  T
Q  418 gggatttcacattttccctctctaaat 444  Q
    || ||||||  ||||||||| ||||||    
T  15969822 ggaatttcatgttttccctcactaaat 15969796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 374 - 456
Target Start/End: Original strand, 15330262 - 15330344
Alignment:
Q  374 ctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctcattaa 456  Q
    ||||||||||  || ||||||||| ||||||||||||||||||||  ||||||  |||| |||  |||||| |||||||||||    
T  15330262 ctcacaaatttcttggtcgcaaaatttagtgacagaattagagagaaatttcaagtttttccttactaaatatccctcattaa 15330344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 482 - 534
Target Start/End: Complemental strand, 7388263 - 7388211
Alignment:
Q  482 ttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaaa 534  Q
    ||||||||||||||||| |||||||||| | ||||||||| ||||| ||||||    
T  7388263 ttcgattctctttagtaccaatttggattgtctaatttagcttcttaaaaaaa 7388211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 390 - 446
Target Start/End: Original strand, 10222702 - 10222758
Alignment:
Q  390 tcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||||||| ||| |||||||||||||||||||||| || |||||  |||||||||||    
T  10222702 tcgcaaaatttaatgacagaattagagagggattttacgttttctttctctaaattt 10222758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 5716937 - 5716975
Alignment:
Q  125 tattaatgttagaagttctgaagcaccgacatatatatg 163  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  5716937 tattaatgttagaagctctaaagcaccgacatatatatg 5716975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 359 - 424
Target Start/End: Original strand, 1841824 - 1841889
Alignment:
Q  359 gaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggattt 424  Q
    ||||||||||||| |||||||||||| ||  | |||||| ||| |||  |||||||||||||||||    
T  1841824 gaaaaaataaaatccctcacaaattccttgattgcaaaatttactgaaggaattagagagggattt 1841889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 2e-38; HSPs: 69)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 9893100 - 9892967
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  9893100 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 9893001  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| ||||||||||||||    
T  9893000 ggatttcacgttttccctcactaaatttccctca 9892967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 314 - 452
Target Start/End: Complemental strand, 28365053 - 28364915
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||    
T  28365053 ttacactactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatta 28364954  T
Q  414 gagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||| || ||||||||| ||||||||||||||    
T  28364953 gagagggattttacgttttccctcactaaatttccctca 28364915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 2992752 - 2992619
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| ||||||| |||| | ||| ||||| |||||||||||||||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  2992752 ctactaggaaaagcataattagcgagggaaattagtgatggaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 2992653  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  2992652 ggatttcatgttttccctcactaaatatccctca 2992619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 15364460 - 15364593
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||     
T  15364460 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaa 15364559  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  15364560 ggattttacgttttccctcactaaatttccctca 15364593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 320 - 452
Target Start/End: Complemental strand, 25398138 - 25398006
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||||    
T  25398138 tactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagg 25398039  T
Q  420 gatttcacattttccctctctaaatttccctca 452  Q
    ||||| || ||||||||| ||||||||||||||    
T  25398038 gattttacgttttccctcactaaatttccctca 25398006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 495629 - 495762
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  495629 ctactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 495728  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||||| || ||||||||| ||||||||||||||    
T  495729 tgattttacgttttccctcactaaatttccctca 495762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 6598601 - 6598468
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  6598601 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattacttggtcgcaaaatttagtgacggaattagagag 6598502  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  6598501 ggatttcaagttttccctcactaaatatccctca 6598468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 12351588 - 12351721
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| | ||||   ||| ||||| ||||| |||||||||||||| |||||||||||| |||||||||||| ||| |||| |||||||||||    
T  12351588 ctactagaaaaagtataattaaggagggaaattagtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttaatgacggaattagagag 12351687  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
      ||||||| ||||||||||||||||||||||||    
T  12351688 aaatttcacgttttccctctctaaatttccctca 12351721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 323 - 452
Target Start/End: Original strand, 22579355 - 22579484
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||||||    
T  22579355 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatttagtgacggaattagagagggat 22579454  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    ||||| ||||||||| | ||||||||||||    
T  22579455 ttcacgttttccctcacaaaatttccctca 22579484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 15448522 - 15448395
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| ||| |||||||| ||| |||| |||||||||||    
T  15448522 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttaatcgcaaaatttaatgacggaattagagag 15448423  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || ||||||||| ||||||||    
T  15448422 ggattttacgttttccctcactaaattt 15448395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 322 - 452
Target Start/End: Complemental strand, 12200828 - 12200698
Alignment:
Q  322 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    ||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||  ||||||||||||||    
T  12200828 ctagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgagggaattagagaggga 12200729  T
Q  422 tttcacattttccctctctaaatttccctca 452  Q
    ||||| |||||||||| |||||| |||||||    
T  12200728 tttcatattttccctcactaaatatccctca 12200698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 12951845 - 12951712
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| ||||| |||||  |||| |||||| |||||||  ||||||||||| || ||||||||| ||| |||| |||||||||||    
T  12951845 ctactaggaaaagcaaaattagagagggaaatttgtgacggaaaacataaaatttctcacaaattccttggtcgcaaaatttaatgacggaattagagag 12951746  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  12951745 ggatttcatgttttccctcactaaatttccctca 12951712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 18048925 - 18048792
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||| ||||||| |||||  |||| ||||| ||||||||||||||  |||||||||||||| ||||||||| ||||||| |||||||| |||    
T  18048925 ctactaggaaaaacaaaattagagaggaaaattagtgacggaaaaaataaaatttctcacaaattcgttggtcgcaaaatttagtgagagaattagggag 18048826  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  |||| |||| ||||||||||||||    
T  18048825 ggatttcatgtttttcctcactaaatttccctca 18048792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 22083975 - 22083842
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| || ||||| |||||||||||    
T  22083975 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaattttgtgacggaattagagag 22083876  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  22083875 ggatttcatgttttccctcactaaatttccctca 22083842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 24661011 - 24661144
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||| |||| |||||||||||    
T  24661011 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagagag 24661110  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||  ||||||||| |||||| |||||||    
T  24661111 agatttcatgttttccctcactaaatatccctca 24661144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 319 - 451
Target Start/End: Complemental strand, 26224565 - 26224433
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||| ||||| |||||||| |||||||||||    
T  26224565 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcacaaaatttagtgacggaattagagag 26224466  T
Q  419 ggatttcacattttccctctctaaatttccctc 451  Q
    ||||||||  ||||||||| |||||| ||||||    
T  26224465 ggatttcatgttttccctcactaaatatccctc 26224433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 319 - 437
Target Start/End: Complemental strand, 5360546 - 5360428
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||||||||||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  5360546 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattttttggtcgcaaaatttagtgacggaattagagag 5360447  T
Q  419 ggatttcacattttccctc 437  Q
     ||||| || |||||||||    
T  5360446 agattttacgttttccctc 5360428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 346 - 452
Target Start/End: Complemental strand, 12845113 - 12845007
Alignment:
Q  346 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 445  Q
    ||||| ||||| ||||||||||||||  ||||||||||| || ||||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||    
T  12845113 gaaattagtgacggaaaaaataaaattgctcacaaattctttggtcgcaaaatttagtgacggaattagagagagatttcacgttttccctctctaaatt 12845014  T
Q  446 tccctca 452  Q
    | |||||    
T  12845013 ttcctca 12845007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 21691497 - 21691631
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaa-tcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||| |||||| |||||| ||||| |||| | ||||||| ||||||||||||  ||||||||||| || ||||||||| ||||||||  |||||||||    
T  21691497 ctactaaaaaaagtaaaattagagagggaaaattagtgatgaaaaaaataaaatttctcacaaattctttggtcgcaaaatttagtgacgaaattagaga 21691596  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||| |||| |||||||||| ||||||||    
T  21691597 gggatttcacgtttttcctctctaaaattccctca 21691631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 17919673 - 17919540
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||||||||||| ||| ||||||||| |||| | ||| |||||| || ||||||||| |||||||| |||||||||||    
T  17919673 ctactagaaaaaacaaaattagcgagagaaatcaatgacggaaaaaatgaaattcatcataaattccttggtcgcaaaatttagtgacggaattagagag 17919574  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| ||| ||||||||  || ||||||||||    
T  17919573 ggattttacagtttccctcattacatttccctca 17919540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 346 - 451
Target Start/End: Complemental strand, 23281896 - 23281791
Alignment:
Q  346 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 445  Q
    ||||| |||||||||||||||||||| |||||||||||   | ||||||||| |||||||| |||||||||||||||||||| ||||||||| | |||||    
T  23281896 gaaattagtgatggaaaaaataaaattcctcacaaattttatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatt 23281797  T
Q  446 tccctc 451  Q
    ||||||    
T  23281796 tccctc 23281791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 448
Target Start/End: Original strand, 30833962 - 30834091
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||| ||||  || ||||||||| ||| ||||||||||||||||    
T  30833962 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcactaattttttggtcgcaaaatttaatgacagaattagagag 30834061  T
Q  419 ggatttcacattttccctctctaaatttcc 448  Q
    |||||| || || |||||| ||||||||||    
T  30834062 ggattttacgttctccctcactaaatttcc 30834091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 320 - 452
Target Start/End: Complemental strand, 21141075 - 21140943
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| |||| ||||||   | ||||||||| |||||||| ||||||||||||    
T  21141075 tactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcccaaatttcatggtcgcaaaatttagtgacggaattagagagg 21140976  T
Q  420 gatttcacattttccctctctaaatttccctca 452  Q
    |||||||| ||||||||| | ||||||||||||    
T  21140975 gatttcacgttttccctcacaaaatttccctca 21140943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 6605498 - 6605621
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  ||||||||||||  ||||||| |||||||||||    
T  6605498 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttagtcgcaaaatatagtgacggaattagagag 6605597  T
Q  419 ggatttcacattttccctctctaa 442  Q
     |||||||  ||||||||| ||||    
T  6605598 agatttcatgttttccctcactaa 6605621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 9885380 - 9885253
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||  | ||| ||||| ||||| ||||||||||||||  |||||||||| ||| || |||||| ||||||||| ||||| ||||    
T  9885380 ctactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttgttggttgcaaaatttagtgacaaaattaaagag 9885281  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    ||||||||  ||||||||| ||||||||    
T  9885280 ggatttcatgttttccctcactaaattt 9885253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 28668237 - 28668114
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||||||||| |||||||||||||| |||||||||||| ||  |||||||| ||| |||| |||||||| ||    
T  28668237 ctactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaataaaattcctcacaaattccttgatcgcaaaatttaatgacggaattagaaag 28668138  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| ||| |||||||| ||||    
T  28668137 ggattttacaatttccctcactaa 28668114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 2669446 - 2669313
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||| | ||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  2669446 ctactagaaaaagcaaaattaacgagggaaattagtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 2669347  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | |||| || |||| || | ||||||||||||||    
T  2669346 gaattttacgtttttccacactaaatttccctca 2669313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 444
Target Start/End: Original strand, 11049753 - 11049878
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  11049753 ctactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 11049852  T
Q  419 ggatttcacattttccctctctaaat 444  Q
     |||||||  ||||||||| ||||||    
T  11049853 agatttcatgttttccctcactaaat 11049878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 16250804 - 16250937
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||   |  |||||||| ||||||||||||||||||||    
T  16250804 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacagaattagagag 16250903  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||| ||||||||| | ||||||| ||||    
T  16250904 agatttcacgttttccctcacaaaatttctctca 16250937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 20182282 - 20182149
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   |  |||||||| |||||||| |||||||||||    
T  20182282 ctactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacggaattagagag 20182183  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | |||||| |||||    
T  20182182 ggatttcacgttttccctcacaaaatttgcctca 20182149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 21990177 - 21990309
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||| | |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  21990177 ctactagaaaaagcaaaattagcgagggaaattaatgacggaaaaa-tgaaattcctcacaaatttcttggtcgcaaaaattagtgacggaattagagag 21990275  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| |||||||| |||||    
T  21990276 ggattttacgttttccctcactaaattttcctca 21990309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 22153709 - 22153842
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   |  |||||||| |||||||| |||||||||||    
T  22153709 ctactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcgcaaaatttagtgacggaattagagag 22153808  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | |||||| |||||    
T  22153809 ggatttcacgttttccctcacaaaatttgcctca 22153842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 324 - 448
Target Start/End: Complemental strand, 9060222 - 9060099
Alignment:
Q  324 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    |||||||||||||||  |||| ||||| ||||| |||||||||||||| |||||||||||  || ||||||||| ||||||||||||||||||||  |||    
T  9060222 agaaaaagcaaaattaaagagcgaaattagtgacggaaaaaataaaatccctcacaaattttttggtcgcaaaatttagtgacagaattagagagaaatt 9060123  T
Q  424 tcacattttccctctctaaatttcc 448  Q
    |||   |||||||| ||||||||||    
T  9060122 tca-tgtttccctcgctaaatttcc 9060099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 5192195 - 5192314
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||||||    
T  5192195 tagaaaaagcaaaattagcgaggaaaattagtgaaggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagagggat 5192294  T
Q  423 ttcacattttccctctctaa 442  Q
    || || ||||||||| ||||    
T  5192295 tttacgttttccctcactaa 5192314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 11077785 - 11077663
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||||||||| |||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| | ||||||||||    
T  11077785 tactagaaaaagaaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggtattagagagg 11077686  T
Q  420 gatttcacattttccctctctaa 442  Q
    |||||||  ||||||||| ||||    
T  11077685 gatttcatgttttccctcactaa 11077663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 358 - 452
Target Start/End: Complemental strand, 27705520 - 27705426
Alignment:
Q  358 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||||||||||| ||||||||| | ||||||||||||    
T  27705520 ggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaatttccctca 27705426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 1939244 - 1939377
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| |||||  |||||||| |||| |||||||||||  || ||||||||| ||| |||| |||||||||||    
T  1939244 ctactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcacaaattttttggtcgcaaaatttaatgacggaattagagag 1939343  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||| ||| || ||| |||||||    
T  1939344 ggatttcatgttttctctcactgaatatccctca 1939377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 14886698 - 14886565
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||| ||||||||||||||| | |||  |||| |||||  ||||||||||||| ||||||| |||| || |||| |||| |||||||| |||||||||||    
T  14886698 ctaccagaaaaagcaaaattagggaggaaaattagtgacagaaaaaataaaatccctcacatattctttggtcgtaaaatttagtgacggaattagagag 14886599  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| |  ||||||||| |||||||| |||||    
T  14886598 ggatttgatgttttccctcactaaattttcctca 14886565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 18033528 - 18033660
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| ||||| | |||| | |||||||||||| || ||||||||| |||||||| |||||||||||    
T  18033528 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaacattaaatt-cctcacaaattccttggtcgcaaaatttagtgacggaattagagag 18033626  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  |||||||||  |||||||||||||    
T  18033627 ggatttcatgttttccctcattaaatttccctca 18033660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 353 - 452
Target Start/End: Complemental strand, 5270496 - 5270396
Alignment:
Q  353 gtgatggaaaaaataaaatgcctcacaaattcgttag-tcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctc 451  Q
    |||||||||||||||||||  ||||||||||  || | ||| |||| |||||||| |||||||||||| ||||||||||||||||||||||| |||||||    
T  5270496 gtgatggaaaaaataaaatttctcacaaatttttttgatcgtaaaatttagtgacggaattagagaggaatttcacattttccctctctaaaattccctc 5270397  T
Q  452 a 452  Q
    |    
T  5270396 a 5270396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 14872255 - 14872133
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||| ||||| |||||| ||||| |||||  |||| |||||| ||||||| |||||||||||| || ||  ||||| |||||||| ||||||||||||    
T  14872255 tactaggaaaagaaaaattagagagggaaatttgtgacggaaaacataaaattcctcacaaattccttggttccaaaatttagtgacggaattagagagg 14872156  T
Q  420 gatttcacattttccctctctaa 442  Q
    |||||||  ||||||||| ||||    
T  14872155 gatttcatgttttccctcactaa 14872133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 343593 - 343698
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| | ||||||| |||| |||||||||||  || ||||||||  |||||||||||||||||||||||||| || |||||||||  |||||||    
T  343593 aaattagtgacgtaaaaaatgaaattcctcacaaattttttggtcgcaaattttagtgacagaattagagagggattttacgttttccctcattaaattt 343692  T
Q  447 ccctca 452  Q
    ||||||    
T  343693 ccctca 343698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 444
Target Start/End: Complemental strand, 26939724 - 26939599
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| ||||||   ||| ||||| |||||   ||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  26939724 ctactagaaaaagtaaaattactgagggaaattagtgacaaaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 26939625  T
Q  419 ggatttcacattttccctctctaaat 444  Q
    ||||||||  ||||||||| ||||||    
T  26939624 ggatttcatgttttccctcactaaat 26939599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 27796836 - 27796969
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| | ||||||| | ||  |||| |||||| ||  | |||||| |||||||| |||||||||||    
T  27796836 ctactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaatgatatttctcataaattccttgattgcaaaatttagtgacggaattagagag 27796935  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  27796936 ggatttcatgttttccctcactaaatatccctca 27796969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 444
Target Start/End: Original strand, 33250710 - 33250835
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||  |||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  33250710 ctactagaaaagacaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 33250809  T
Q  419 ggatttcacattttccctctctaaat 444  Q
    | ||||||  ||||||||| ||||||    
T  33250810 gaatttcatgttttccctcactaaat 33250835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 358 - 442
Target Start/End: Complemental strand, 33547644 - 33547560
Alignment:
Q  358 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 442  Q
    |||||||||||||| |||||||||||| || ||||||||| ||||||||| ||||||| ||||||||||  ||||||||| ||||    
T  33547644 ggaaaaaataaaatccctcacaaattctttggtcgcaaaatttagtgacaaaattagatagggatttcatgttttccctcactaa 33547560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 327 - 426
Target Start/End: Complemental strand, 6978406 - 6978307
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| | ||| ||||| ||| | ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||| ||||||    
T  6978406 aaaagcaaaattagcgagggaaattagttacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaggaatttca 6978307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 321 - 452
Target Start/End: Original strand, 12157380 - 12157511
Alignment:
Q  321 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 420  Q
    ||||||||||||||||||   ||| ||||| ||||| |||||||||||||| ||| ||||| || || |||  |||| |||||||| ||||||||||  |    
T  12157380 actagaaaaagcaaaattaaggagggaaattagtgacggaaaaaataaaatcccttacaaaatctttggtcataaaatttagtgacggaattagagaatg 12157479  T
Q  421 atttcacattttccctctctaaatttccctca 452  Q
    |||||| |||||  |||||||||||| |||||    
T  12157480 atttcatatttttgctctctaaattttcctca 12157511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 13145111 - 13145016
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 442  Q
    ||||||| || ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||| |||| |||||||| ||||||||| ||||    
T  13145111 aaatcagcgagggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaaagagagatttcacgttttccctcactaa 13145016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 323 - 426
Target Start/End: Complemental strand, 14772794 - 14772691
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | |||||||||  |||| | |||| ||||||| |||||||||||| || |||| |||| |||||||| ||||||||||| |||    
T  14772794 tagaaaaagcaaaattagggagagaaatttgtgacgaaaaacataaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagagagat 14772695  T
Q  423 ttca 426  Q
    ||||    
T  14772694 ttca 14772691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 346 - 452
Target Start/End: Original strand, 12680213 - 12680319
Alignment:
Q  346 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 445  Q
    ||||| ||||| ||||||||||||||  ||||| ||||| ||  ||| |||| ||| |||| |||||||||||| ||||||| |||||||||||||||||    
T  12680213 gaaattagtgacggaaaaaataaaattgctcacgaattctttgatcgtaaaatttaatgacggaattagagaggaatttcacgttttccctctctaaatt 12680312  T
Q  446 tccctca 452  Q
    | |||||    
T  12680313 ttcctca 12680319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 436
Target Start/End: Complemental strand, 18492503 - 18492389
Alignment:
Q  322 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    ||||||||||||||||| | ||   |||| ||||| ||||||||| ||||  |||||||||||  | ||||||||| |||||||| ||||||||| ||||    
T  18492503 ctagaaaaagcaaaattagcgatgcaaattagtgacggaaaaaatgaaatttctcacaaattccatggtcgcaaaatttagtgacggaattagagtggga 18492404  T
Q  422 tttcacattttccct 436  Q
    |||||| ||||||||    
T  18492403 tttcacgttttccct 18492389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 323 - 452
Target Start/End: Original strand, 12205191 - 12205320
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    ||||||||| |||||| |  |||||||| ||||| |||||| || ||||  ||||||||||| | | ||| |||| |||||||| ||||||| |||||||    
T  12205191 tagaaaaagtaaaattaggaagagaaattagtgacggaaaacattaaatttctcacaaattcttaaatcgtaaaatttagtgacggaattagtgagggat 12205290  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    ||||| ||||||||||  |||||| |||||    
T  12205291 ttcacgttttccctcttaaaattttcctca 12205320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 327 - 452
Target Start/End: Original strand, 22055622 - 22055747
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||| ||||||| ||||| ||||| | |||  ||||||||||||| ||||||||||||||| ||| ||||| | | |||  |||||||||||||||||||    
T  22055622 aaaaacaaaattagagagggaaattaatgacagaaaaaataaaattcctcacaaattcgttggtcacaaaattcaatgagggaattagagagggatttca 22055721  T
Q  427 cattttccctctctaaatttccctca 452  Q
      |||| |||| ||||| ||||||||    
T  22055722 tgtttttcctcactaaacttccctca 22055747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 326 - 442
Target Start/End: Complemental strand, 12499346 - 12499230
Alignment:
Q  326 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 425  Q
    ||||| ||||||| | ||| ||||  ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| || ||||||||||||||     
T  12499346 aaaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttt 12499247  T
Q  426 acattttccctctctaa 442  Q
    || ||||||||| ||||    
T  12499246 acgttttccctcactaa 12499230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 326 - 442
Target Start/End: Complemental strand, 12506675 - 12506559
Alignment:
Q  326 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 425  Q
    ||||| ||||||| | ||| ||||  ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| || ||||||||||||||     
T  12506675 aaaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttt 12506576  T
Q  426 acattttccctctctaa 442  Q
    || ||||||||| ||||    
T  12506575 acgttttccctcactaa 12506559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 326 - 442
Target Start/End: Original strand, 12509555 - 12509671
Alignment:
Q  326 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 425  Q
    ||||| ||||||| | ||| ||||  ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| || ||||||||||||||     
T  12509555 aaaaaacaaaattagcgagggaaagtagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggagttagagagggatttt 12509654  T
Q  426 acattttccctctctaa 442  Q
    || ||||||||| ||||    
T  12509655 acgttttccctcactaa 12509671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 368 - 452
Target Start/End: Complemental strand, 14036708 - 14036624
Alignment:
Q  368 aaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||| ||||||||||||  |  |||||||| ||| ||||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  14036708 aaattcctcacaaattccatgatcgcaaaatttaatgacagaattagagagggatttcacgttttccctcacaaaatttccctca 14036624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 319 - 427
Target Start/End: Complemental strand, 15509293 - 15509185
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||| |||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | |||| |||| |||||||| |||||||||||    
T  15509293 ctaccagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcggaaaatttagtgacggaattagagag 15509194  T
Q  419 ggatttcac 427  Q
    |||||||||    
T  15509193 ggatttcac 15509185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 15961409 - 15961532
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| ||| |||||||  ||  |||||||| ||||| || |||||||||||    
T  15961409 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattccttacaaatttcttgatcgcaaaatttagtaacggaattagagag 15961508  T
Q  419 ggatttcacattttccctctctaa 442  Q
    | |||| || ||||||||| ||||    
T  15961509 gaattttacgttttccctcactaa 15961532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 327 - 452
Target Start/End: Complemental strand, 11530354 - 11530229
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| | ||| |||||  |||| |||||| |||||||  |||| |||||  ||| ||| |||| |||||||| |||||||||| ||||||||    
T  11530354 aaaagcaaaattagggagggaaatttgtgacggaaaacataaaatttctcataaatttcttaatcgtaaaatttagtgacggaattagagatggatttca 11530255  T
Q  427 cattttccctctctaaatttccctca 452  Q
      ||||||||| |||||||| |||||    
T  11530254 tgttttccctcactaaattttcctca 11530229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 360 - 452
Target Start/End: Original strand, 11431684 - 11431775
Alignment:
Q  360 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||  ||||||||||| ||| | |||||| |||||||| |||||| |||||||| || | |||| |||||||||||||||||||    
T  11431684 aaaaaataaaatctctcacaaattctttatt-gcaaaatttagtgacggaattaaagagggatatcgcgtttttcctctctaaatttccctca 11431775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 363 - 451
Target Start/End: Original strand, 19175823 - 19175910
Alignment:
Q  363 aaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctc 451  Q
    |||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||| |||| |||||||||||| || ||||||||||    
T  19175823 aaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagaggaattttacattttccctcact-aatttccctc 19175910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 10458901 - 10458778
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| || | |||||||||||| || || |||||| |||||||  |||||| ||||    
T  10458901 ctactagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaatttcctcacaaattccttggttgcaaaatttagtgatggaattaaagag 10458802  T
Q  419 ggatttcacattttccctctctaa 442  Q
      |||| ||||||| |||| ||||    
T  10458801 aaattttacatttttcctcactaa 10458778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 313 - 442
Target Start/End: Complemental strand, 6065580 - 6065451
Alignment:
Q  313 cttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatt 412  Q
    ||||| ||| ||| |||||||||||| | |||  |||| | ||| ||||||||||||||  ||||||||||| ||  |||||||| ||| ||||| ||||    
T  6065580 cttacactattaggaaaagcaaaattagggaggaaaattaatgacggaaaaaataaaatctctcacaaattctttgatcgcaaaatttaatgacaaaatt 6065481  T
Q  413 agagagggatttcacattttccctctctaa 442  Q
    ||||||| |||||   ||||||||| ||||    
T  6065480 agagaggaatttcttgttttccctcactaa 6065451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 444
Target Start/End: Original strand, 12160849 - 12160973
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| | ||||||| |||| |||||||||||  ||  ||| |||| ||||||||  ||||||||||    
T  12160849 ctactagaaaaagtaaaattagcgagggaaattagtgacgtaaaaaatgaaattcctcacaaattttttgatcg-aaaatttagtgacgaaattagagag 12160947  T
Q  419 ggatttcacattttccctctctaaat 444  Q
    |||||| |  ||||||||| ||||||    
T  12160948 ggattttatgttttccctcactaaat 12160973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 11350315 - 11350196
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||| |||||||||||| | ||| |||||  |||| |||||| | ||||    |||||||||| ||| |||||||| ||||||||||||||||||||     
T  11350315 tactaggaaaagcaaaattagggagggaaatttgtgacggaaaacaaaaaaa---tcacaaattccttaatcgcaaaatttagtgacagaattagagagc 11350219  T
Q  420 gatttcacattttccctctctaa 442  Q
    ||||| |  ||||||||| ||||    
T  11350218 gattttatgttttccctcactaa 11350196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 442
Target Start/End: Original strand, 20692841 - 20692936
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 442  Q
    |||| ||||| |||||||||||||| | | | || ||  || ||||||||| ||||||||  |||||||||||||||| || ||||||||| ||||    
T  20692841 aaattagtgacggaaaaaataaaattctttataagttttttggtcgcaaaatttagtgacgaaattagagagggattttacgttttccctcactaa 20692936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 446
Target Start/End: Original strand, 3673177 - 3673262
Alignment:
Q  361 aaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||||| |||| |||||||||||  || |||| |||| |||||||| ||||||||||   |||| ||||||| |||| ||||||||    
T  3673177 aaaaatgaaattcctcacaaattttttggtcgtaaaatttagtgacggaattagagaaaaattttacatttttcctcactaaattt 3673262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 19081865 - 19081732
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| |||||| |||||| ||||| ||||| ||||||||||||||||||||  ||||||||||| || |||| |||| ||||||||||||||||||||    
T  19081865 ctactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacagaattagagag 19081766  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||||||||| ||||||||    
T  19081765 ggatttcacgttttccctctctaaaattccctca 19081732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 19129753 - 19129620
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| |||||| |||||| ||||| ||||| ||||||||||||||||||||  ||||||||||| || |||| |||| ||||||||||||||||||||    
T  19129753 ctactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacagaattagagag 19129654  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||||||||| ||||||||    
T  19129653 ggatttcacgttttccctctctaaaattccctca 19129620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 38531172 - 38531305
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| |||||||||||||| |||||||||||| |||||||||||| |||||||  |||||||||||    
T  38531172 ctactagaaaaagtaaaattagggagggaaataagtgacggaaaaaataaaattcctcacaaattccttagtcgcaaaatttagtgatggaattagagag 38531271  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||| ||||||||||||||||||||||||    
T  38531272 agatttcacgttttccctctctaaatttccctca 38531305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 12720946 - 12720813
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||||||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  12720946 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 12720847  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  12720846 ggatttcatgttttccctcactaaatatccctca 12720813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 6459354 - 6459221
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||| ||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  6459354 ctactagaaaaagcgaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 6459255  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  6459254 ggatttcatgttttccctcactaaatatccctca 6459221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 9109977 - 9110110
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  9109977 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 9110076  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  9110077 ggatttcatgttttccctcactaaatatccctca 9110110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 12989989 - 12989856
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| ||||||||||||| |||||||||||  |||| ||||||||||||||  ||||||||||| || ||||||||  |||||||| ||||||| |||    
T  12989989 ctactaaaaaaagcaaaattagagagagaaattggtgacggaaaaaataaaatttctcacaaattccttggtcgcaaagtttagtgactgaattagggag 12989890  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||| ||||||||||| ||||||||||||    
T  12989889 agatttcacgttttccctctcaaaatttccctca 12989856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 14761004 - 14760871
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||  |||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| ||||||| |||    
T  14761004 ctactagaaaaagcaaaattaaagagggaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagtgag 14760905  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  14760904 ggatttcatgttttccctcactaaatttccctca 14760871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 15243222 - 15243089
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||  | ||||||||| ||||| ||||||||| |||| |||||||||||| ||  |||||||| |||||||| |||||||| ||    
T  15243222 ctactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagatag 15243123  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| ||||||||||||||    
T  15243122 ggatttcacgttttccctcactaaatttccctca 15243089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 22603685 - 22603552
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  || ||||| ||||||||||||||| |||| |||||||||||| ||  |||||||| |||||||| |||||||||||    
T  22603685 ctactagaaaaagcaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcacaaattctttgatcgcaaaatttagtgacggaattagagag 22603586  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||||| || ||||||||| ||||||||||||||    
T  22603585 cgattttacgttttccctcactaaatttccctca 22603552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 29549555 - 29549422
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| | ||||||||||||  ||||||||||  |||||||| ||| |||||||| |||||||||||    
T  29549555 ctactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaataaaatttctcacaaattttttagtcgcgaaatttagtgacggaattagagag 29549456  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  29549455 ggattttacgttttccctcactaaatttccctca 29549422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 45839429 - 45839296
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  45839429 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 45839330  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  45839329 ggatttcatgttttccctcactaaatatccctca 45839296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 319 - 455
Target Start/End: Original strand, 46339447 - 46339583
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| |||||||||||| |||||||| |||||||||||    
T  46339447 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagag 46339546  T
Q  419 ggatttcacattttccctctctaaatttccctcatta 455  Q
     |||||||  ||||||||  |||||| ||||||||||    
T  46339547 agatttcatgttttcccttactaaatatccctcatta 46339583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 321 - 452
Target Start/End: Original strand, 16913581 - 16913712
Alignment:
Q  321 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 420  Q
    ||||| |||||||||||| |  || ||||| ||||| |||||||||||||| |||||||||||| ||||||| |||| ||| | || |||||||||||||    
T  16913581 actaggaaaagcaaaattaggaagggaaattagtgacggaaaaaataaaattcctcacaaattccttagtcgtaaaatttaataacggaattagagaggg 16913680  T
Q  421 atttcacattttccctctctaaatttccctca 452  Q
    ||||||  ||||||||||||||||||||||||    
T  16913681 atttcatgttttccctctctaaatttccctca 16913712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 323 - 446
Target Start/End: Original strand, 41120743 - 41120866
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||||||    
T  41120743 tagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggat 41120842  T
Q  423 ttcacattttccctctctaaattt 446  Q
    || || ||||||||| ||||||||    
T  41120843 tttacgttttccctcactaaattt 41120866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 50845332 - 50845459
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  50845332 ctactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 50845431  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    ||||||||  ||||||||| ||||||||    
T  50845432 ggatttcatgttttccctcactaaattt 50845459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 13195720 - 13195587
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||| |||||||| | ||| || || ||||||||||||  |||||| |||||| ||||| |  | ||||||| ||||||||||||||||||||    
T  13195720 ctactagaaaatgcaaaattagggagggagattagtgatggaaaagttaaaattcctcacgaattcctgggacgcaaaatttagtgacagaattagagag 13195621  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||  ||||||||||||||||||||||||||    
T  13195620 ggattttgcattttccctctctaaatttccctca 13195587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 20408162 - 20408295
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| ||||| || |||||||||||    
T  20408162 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtaacggaattagagag 20408261  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  20408262 ggatttcacgttttccctcacaaaatttccctca 20408295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 41752570 - 41752437
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||  ||||| ||||| ||||||||||||||   |||||||||| || ||||||||| |||||||| |||||||||||    
T  41752570 ctactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaatttttcacaaattccttggtcgcaaaatttagtgacggaattagagag 41752471  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  41752470 ggatttcatgttttccctcactaaatatccctca 41752437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 52183815 - 52183682
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| | ||| |||||||||||||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  52183815 ctactagaaaaagcaaaattaacgagggaaattaatgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 52183716  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  52183715 ggatttcacgttttccctcacaaaatttccctca 52183682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 323 - 446
Target Start/End: Complemental strand, 4340540 - 4340417
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||||||    
T  4340540 tagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggat 4340441  T
Q  423 ttcacattttccctctctaaattt 446  Q
    || || ||||||||| ||||||||    
T  4340440 tttacgttttccctcactaaattt 4340417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 28229457 - 28229580
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  28229457 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 28229556  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  28229557 ggattttacgttttccctcactaa 28229580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 6412055 - 6412188
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||| | ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||| ||||    
T  6412055 ctactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattaaagag 6412154  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  6412155 ggatttcatgttttccctcactaaatatccctca 6412188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 17200012 - 17200145
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||||||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||| |||     
T  17200012 ctactagaaaaaacaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcacaaattcattggtcgcaaaatttagtgacggaattaaagaa 17200111  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | |||| | ||||| |||| ||||||||||||||    
T  17200112 gaattttatatttttcctcactaaatttccctca 17200145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 456
Target Start/End: Complemental strand, 51973561 - 51973424
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||| | ||||||||| |||| ||||| ||| ||  | ||||||||| |||||||| |||||||||||    
T  51973561 ctactagaaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcataaaatctatggtcgcaaaatttagtgacggaattagagag 51973462  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
      ||||||||||||||||| | ||||||||||||||||    
T  51973461 aaatttcacattttccctcacaaaatttccctcattaa 51973424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 324 - 452
Target Start/End: Complemental strand, 9464235 - 9464107
Alignment:
Q  324 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    |||||||| |||||| | ||  ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| ||||||||||||||||    
T  9464235 agaaaaagtaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatt 9464136  T
Q  424 tcacattttccctctctaaatttccctca 452  Q
    |||| ||||||||| | ||||||||||||    
T  9464135 tcacgttttccctcacaaaatttccctca 9464107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 356 - 452
Target Start/End: Original strand, 13523000 - 13523096
Alignment:
Q  356 atggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||| |||  ||||||||||| || ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||| ||||||||    
T  13523000 atggaaaaaatataatttctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctctctaaaattccctca 13523096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 324 - 452
Target Start/End: Original strand, 18890556 - 18890684
Alignment:
Q  324 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    ||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||||||||||   | ||||||||| ||||| || ||||||||||||||||    
T  18890556 agaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaatttaatggtcgcaaaatttagtaacggaattagagagggatt 18890655  T
Q  424 tcacattttccctctctaaatttccctca 452  Q
    |||| ||||| ||| | ||||||||||||    
T  18890656 tcacgttttctctcacaaaatttccctca 18890684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 46790137 - 46790014
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||| |||| |||||||| ||    
T  46790137 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaatgacggaattagaaag 46790038  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  46790037 ggattttacgttttccctcactaa 46790014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 314 - 452
Target Start/End: Original strand, 18894897 - 18895035
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| ||||||| |||||||||||| | |||  |||| ||||| | |||||||||||| ||||||| |||| || ||||||||| ||||||||  |||||    
T  18894897 ttacactactaggaaaagcaaaattagcgaggaaaattagtgacgaaaaaaataaaatacctcacatattctttggtcgcaaaatttagtgacgaaatta 18894996  T
Q  414 gagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||  ||||||||| |||||||| |||||    
T  18894997 gagagggatttcatgttttccctcactaaattttcctca 18895035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 20581047 - 20580913
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||| |||||| |||||| ||||| ||||| |||||||||||||| | ||||  ||||||||||| |||||||||||| ||| | ||  |||||||||    
T  20581047 ctactaaaaaaagtaaaattagagagggaaattagtgatggaaaaaaattaaatttctcacaaattccttagtcgcaaaatttaattacgaaattagaga 20580948  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||| ||||||||||||||| ||| ||||    
T  20580947 gggatttcacgttttccctctctaaaattctctca 20580913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 346 - 452
Target Start/End: Original strand, 41071864 - 41071970
Alignment:
Q  346 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 445  Q
    ||||| ||||| ||| ||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||||||||| || ||||||||| |||||||    
T  41071864 gaaattagtgacggagaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatt 41071963  T
Q  446 tccctca 452  Q
    |||||||    
T  41071964 tccctca 41071970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 7830168 - 7830035
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||   |||||||||| |||||||  ||||||||||| || ||||||||| ||||||||  |||||| |||    
T  7830168 ctactaggaaaagcaaaattagggagggaaatttatgatggaaaacataaaatttctcacaaattccttggtcgcaaaatttagtgacgaaattagggag 7830069  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  7830068 ggatttcatgttttccctcactaaatttccctca 7830035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 12161951 - 12161818
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | |||  |||| | ||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  12161951 ctactagaaaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 12161852  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  12161851 ggatttcacgttttccctcacaaaatttccctca 12161818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 22158939 - 22158806
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||| |||||||| |||||| | ||| ||||| |||||  |||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  22158939 ctaccagaaaaagtaaaattagcgagggaaattagtgacagaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 22158840  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  22158839 ggatttcacgttttccctcacaaaatttccctca 22158806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 23458034 - 23457901
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | |||  |||| | ||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  23458034 ctactagaaaaagtaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 23457935  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  23457934 ggatttcacgttttccctcacaaaatttccctca 23457901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 46865380 - 46865247
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||| | | ||| ||||| ||||| |||||||||||||| |||||||||||  || | ||||||| ||||| |  |||||||||||    
T  46865380 ctactagaaaaagaaaaactagggagggaaattagtgacggaaaaaataaaatccctcacaaatttcttggccgcaaaatttagtaatggaattagagag 46865281  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| || ||||||||| |||||||||||    
T  46865280 ggatttcacgttctccctctctgaatttccctca 46865247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 19865381 - 19865258
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | |||  |||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| |||||||||||    
T  19865381 ctactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19865282  T
Q  419 ggatttcacattttccctctctaa 442  Q
    ||||||||  ||||||||| ||||    
T  19865281 ggatttcatgttttccctcactaa 19865258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 323 - 446
Target Start/End: Original strand, 46785964 - 46786087
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||| ||| || ||||||||| ||| |||| |||||||||||||||    
T  46785964 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaagttccttggtcgcaaaatttaatgacggaattagagagggat 46786063  T
Q  423 ttcacattttccctctctaaattt 446  Q
    || || ||||||||| ||||||||    
T  46786064 tttacgttttccctcactaaattt 46786087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 314 - 452
Target Start/End: Original strand, 7181552 - 7181690
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| |||||||||||||||||||| |  || ||||| ||||| |||||||| ||||| ||||||| |||   | ||| ||||| |||||||| ||||||    
T  7181552 ttacactactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaagaaaattcctcacatatttcatggtcacaaaatttagtgacggaatta 7181651  T
Q  414 gagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||| ||||||||  | ||||||||||||    
T  7181652 gagagggatttcacgttttcccttacaaaatttccctca 7181690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 319 - 425
Target Start/End: Original strand, 25787999 - 25788105
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  |||| ||||| |||||||| ||||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  25787999 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaagaaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 25788098  T
Q  419 ggatttc 425  Q
    |||||||    
T  25788099 ggatttc 25788105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 9985329 - 9985462
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| ||| |||| |||||||||||    
T  9985329 ctactagaaaaaacaaaattagcaagggaaattagtgacggaaaaaatcaaattcctcacaaattctttggtcgtaaaatttattgacggaattagagag 9985428  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || |||| |||| | ||||||||||||    
T  9985429 ggattttacgtttttcctcacaaaatttccctca 9985462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 452
Target Start/End: Original strand, 12174808 - 12174901
Alignment:
Q  359 gaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||| |||||||||||| || ||||||||| |||||||| |||||||||| ||||||||  ||||||||| |||||| |||||||    
T  12174808 gaaaaaataaaattcctcacaaattccttcgtcgcaaaatttagtgacggaattagagaaggatttcatgttttccctcactaaatatccctca 12174901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 17661183 - 17661054
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    ||||||||||||||||   ||  ||||| ||||| |||||||||||||| |||||||||||   | ||||||||| |||||||  |||||||||||| ||    
T  17661183 tagaaaaagcaaaattaacgacggaaattagtgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgatggaattagagaggaat 17661084  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    ||||| ||||||||| | ||||||||||||    
T  17661083 ttcacgttttccctcacaaaatttccctca 17661054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 22789621 - 22789726
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| |||||| |||||||  |||||||||||  | ||||||||| |||||||| |||||||| || |||||||| ||||||||||||||||||    
T  22789621 aaattagtgacggaaaacataaaatttctcacaaattccatggtcgcaaaatttagtgactgaattagatagagatttcacgttttccctctctaaattt 22789720  T
Q  447 ccctca 452  Q
    ||||||    
T  22789721 ccctca 22789726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 327 - 456
Target Start/End: Complemental strand, 6776015 - 6775887
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| ||||| ||||| |||||||||||||||||||| |||||||||||| || || |||||| ||||  || |||||||||||| |||| |    
T  6776015 aaaagcaaaattagagagggaaat-agtgatggaaaaaataaaatccctcacaaattctttggttgcaaaacttagcaacggaattagagaggaatttta 6775917  T
Q  427 cattttccctctctaaatttccctcattaa 456  Q
      ||||  ||| ||||||||| ||||||||    
T  6775916 agttttttctcactaaatttctctcattaa 6775887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 9259185 - 9259318
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| |||||||   |||  |||| ||||| |||||||| |||||  ||||||||||   | ||||||||| |||||||| |||||||||||    
T  9259185 ctactagaaaaaacaaaattaacgaggaaaattagtgacggaaaaaagaaaatttctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 9259284  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||| ||||||||| | ||||||||||||    
T  9259285 agatttcacgttttccctcacaaaatttccctca 9259318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 13102453 - 13102320
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| ||||||||||||   ||| |||||  |||| |||||| ||||||| | |||||||||| || ||||||||| |||||||| |||||||| ||    
T  13102453 ctactaggaaaagcaaaattaaggagggaaatttgtgacggaaaacataaaattcatcacaaattccttggtcgcaaaatttagtgacggaattagaaag 13102354  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||||| |  ||||||||| ||||||||||||||    
T  13102353 agattttatgttttccctcactaaatttccctca 13102320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 359 - 452
Target Start/End: Original strand, 29093596 - 29093689
Alignment:
Q  359 gaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||| |||||||| ||| ||| |||||||| ||| |||  |||||||||||| |||| ||||||||| |||||||||||||||||    
T  29093596 gaaaaaataaaattcctcacaagttccttaatcgcaaaatttaatgatggaattagagaggaattttacattttccatctctaaatttccctca 29093689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 327 - 452
Target Start/End: Original strand, 30928388 - 30928513
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| ||||| ||||| ||||| ||||||||||||||  || |||||||| || ||||||||| ||||||| ||||||||||||  ||||||    
T  30928388 aaaagcaaaattagagagggaaattagtgacggaaaaaataaaatctctaacaaattccttggtcgcaaaatttagtgagagaattagagagaaatttca 30928487  T
Q  427 cattttccctctctaaatttccctca 452  Q
      ||||| |||  ||||||| |||||    
T  30928488 tgttttcactcagtaaattttcctca 30928513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 327 - 443
Target Start/End: Complemental strand, 11917914 - 11917799
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    ||||| |||||| ||||| ||||||||||| | |||||| |||||  ||||||||||  || ||||||||| |||||||| |||||||| ||||| ||||    
T  11917914 aaaagaaaaattagagagggaaatcagtgacg-aaaaaacaaaatatctcacaaattatttggtcgcaaaatttagtgacggaattagaaagggagttca 11917816  T
Q  427 cattttccctctctaaa 443  Q
    | |||||||||||||||    
T  11917815 cgttttccctctctaaa 11917799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 319 - 447
Target Start/End: Original strand, 50092300 - 50092428
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   |  || ||||| |||||||| |||||||||||    
T  50092300 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatgatcacaaaatttagtgacggaattagagag 50092399  T
Q  419 ggatttcacattttccctctctaaatttc 447  Q
    ||||||||  ||||||||| | |||||||    
T  50092400 ggatttcatgttttccctcacaaaatttc 50092428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 8940996 - 8941119
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| ||  ||| |||| |||| ||| |||||||||||    
T  8940996 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttgatcgtaaaatttagcgacggaattagagag 8941095  T
Q  419 ggatttcacattttccctctctaa 442  Q
    | |||| || ||||||||| ||||    
T  8941096 gaattttacgttttccctcactaa 8941119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 9177237 - 9177110
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| ||| | ||||||||| |||| |||||||||||  || ||||||||| ||||||||  ||||| ||||    
T  9177237 ctactagaaaaaacaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacgaaattaaagag 9177138  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || |||| |||| ||||||||    
T  9177137 ggattttacgtttttcctcactaaattt 9177110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 347 - 450
Target Start/End: Complemental strand, 26825349 - 26825246
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| |||||||||||  | |||||||||||| ||  ||| |||| |||||||| |||||||||||| ||||||| ||||||||||||||| ||    
T  26825349 aaattagtgacggaaaaaataacttccctcacaaattctttgatcgtaaaatttagtgacggaattagagaggaatttcacgttttccctctctaaaatt 26825250  T
Q  447 ccct 450  Q
    ||||    
T  26825249 ccct 26825246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 32046985 - 32046880
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||| | ||||||||||| ||||| || ||||||||| ||| ||||    
T  32046985 aaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgtcggaattagagagagattttacgttttccctcactatattt 32046886  T
Q  447 ccctca 452  Q
    ||||||    
T  32046885 ccctca 32046880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 48522655 - 48522522
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  |||| |||||  |||||||||||||  ||||||||||  || ||||||||| |||||||| |||||  ||||    
T  48522655 ctactagaaaaagcaaaattagcgaggaaaattagtgacagaaaaaataaaatttctcacaaattttttggtcgcaaaatttagtgacggaatttaagag 48522556  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | ||||||  ||||||||| ||| || |||||||    
T  48522555 gaatttcatgttttccctcactacatatccctca 48522522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 352 - 424
Target Start/End: Complemental strand, 41359092 - 41359020
Alignment:
Q  352 agtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggattt 424  Q
    ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||||||||    
T  41359092 agtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggattt 41359020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 426
Target Start/End: Original strand, 13308822 - 13308929
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||| ||||||| ||||| ||||| ||||   ||||||||||||| |||||||||||  || ||||||||| |||||||   ||||||||||    
T  13308822 ctactaggaaaaacaaaattagagagggaaattagtgtccgaaaaaataaaattcctcacaaatttattggtcgcaaaatttagtgatgaaattagagag 13308921  T
Q  419 ggatttca 426  Q
    ||||||||    
T  13308922 ggatttca 13308929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 41063306 - 41063201
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| |||||||||||||| ||||||| |||| ||  |||||||| |||||||| ||||||||||| ||||| |  |||| |||| ||||||||    
T  41063306 aaattagtgacggaaaaaataaaatccctcacatattctttgatcgcaaaatttagtgacggaattagagagagattttatgtttttcctcactaaattt 41063207  T
Q  447 ccctca 452  Q
     |||||    
T  41063206 tcctca 41063201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 452
Target Start/End: Original strand, 14486705 - 14486767
Alignment:
Q  390 tcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||| | |||||| ||||||||||| |||||||| |||||||||||||||||| |||||    
T  14486705 tcgcaaaattcagtgacggaattagagagagatttcacgttttccctctctaaattttcctca 14486767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 358 - 452
Target Start/End: Original strand, 16258527 - 16258621
Alignment:
Q  358 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||| ||||||||  |||||| |||| || || |||||| |||||||| |||||| |||||| |||||| |||| ||||||||||||| |||||    
T  16258527 ggaaagaataaaatatctcacagattccttggttgcaaaatttagtgacggaattatagagggttttcacgtttttcctctctaaattttcctca 16258621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 17733955 - 17734089
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgc-aaaagttagtgacagaattagaga 417  Q
    ||||||| |||||||||||| | |||| || | ||||| |||||| |||||||  ||||||||||  || ||||| |||| ||| |||  ||||||| ||    
T  17733955 ctactaggaaaagcaaaattagggagaaaatttagtgacggaaaagataaaatctctcacaaatttcttggtcgcaaaaatttaatgatggaattagcga 17734054  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    | |||||||  ||||||||| ||||||||||||||    
T  17734055 gagatttcatgttttccctcactaaatttccctca 17734089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 18787915 - 18788045
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||| |||||||||||||| | ||  ||||| ||||| | |||||||||||| ||||  |||||  || ||||||||| |||||||||  ||||||||     
T  18787915 ctacttgaaaaagcaaaattagggatggaaattagtgacg-aaaaaataaaatccctcctaaattttttggtcgcaaaatttagtgaca--attagagat 18788011  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||| |||| |||||||||| |||||||||||||    
T  18788012 tgatgtcacgttttccctctttaaatttccctca 18788045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 417
Target Start/End: Original strand, 27253857 - 27253955
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    ||||||||||||| |||||| | |||  |||| | ||| ||||||||||||||  |||||||||||  | ||||||||| |||||||| ||||||||||    
T  27253857 ctactagaaaaagaaaaattagggaggaaaattaatgacggaaaaaataaaatttctcacaaattccatggtcgcaaaatttagtgacggaattagaga 27253955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 409 - 455
Target Start/End: Complemental strand, 3786447 - 3786401
Alignment:
Q  409 aattagagagggatttcacattttccctctctaaatttccctcatta 455  Q
    ||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  3786447 aattagagaggaatttcacattttccctctctaaaattcccttatta 3786401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 479 - 533
Target Start/End: Complemental strand, 26264350 - 26264296
Alignment:
Q  479 aggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaa 533  Q
    |||||| ||||||||| || ||||||||||| ||||||||||||||||| |||||    
T  26264350 aggttcaattctctttggtgtcaatttggatggactaatttagtttcttaaaaaa 26264296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 379 - 452
Target Start/End: Original strand, 12370003 - 12370076
Alignment:
Q  379 aaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| |||||||| |||||||||| |||||| |  ||||||||  ||||||||||||||    
T  12370003 aaattctttggtcgcaaaatttagtgacggaattagagaaggattttatgttttcccttactaaatttccctca 12370076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 424
Target Start/End: Original strand, 45918947 - 45919011
Alignment:
Q  360 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggattt 424  Q
    ||||||| |||| ||||| |||||| || || |||||| ||||| ||||||||||||||||||||    
T  45918947 aaaaaatgaaatccctcataaattccttggttgcaaaatttagtaacagaattagagagggattt 45919011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 1600302 - 1600247
Alignment:
Q  479 aggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaaa 534  Q
    |||||||||||||| | || ||||||||||| |||||| |||| ||||||||||||    
T  1600302 aggttcgattctctctggtgtcaatttggatggactaacttagcttcttcaaaaaa 1600247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 424
Target Start/End: Original strand, 9882070 - 9882144
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggattt 424  Q
    |||| ||||| |||||||||||||| ||||||||||   ||  |||||||| |||||||| |||||||||||| ||||    
T  9882070 aaattagtgacggaaaaaataaaatccctcacaaat---ttcttcgcaaaatttagtgacggaattagagaggaattt 9882144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 450
Target Start/End: Complemental strand, 39040898 - 39040860
Alignment:
Q  412 tagagagggatttcacattttccctctctaaatttccct 450  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  39040898 tagagagggatttcacgttttccctctctaaaattccct 39040860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 352 - 426
Target Start/End: Complemental strand, 49881148 - 49881074
Alignment:
Q  352 agtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    ||||| ||||||||||||||   ||| |||||| || ||| ||||| ||||| |||| |||||||||||||||||    
T  49881148 agtgacggaaaaaataaaatctttcataaattccttggtcacaaaatttagtaacaggattagagagggatttca 49881074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 52621263 - 52621158
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||||||||||||||||||  |||| |||||  ||||||  |||| |||||||  ||||||| || | ||||||  |||| |||| ||||||||    
T  52621263 aaattagtgatggaaaaaataaaatctctcataaattatttagtcataaaatttagtgatggaattagtgaagaatttcatgtttttcctcactaaattt 52621164  T
Q  447 ccctca 452  Q
     |||||    
T  52621163 tcctca 52621158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 4e-37; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 313 - 452
Target Start/End: Original strand, 13788051 - 13788190
Alignment:
Q  313 cttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatt 412  Q
    ||||| |||||||||||||||||||| | ||| ||||||||||| ||||||||| |||| |||||||||||| || ||||||||| ||||||||  ||||    
T  13788051 cttacactactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacgaaatt 13788150  T
Q  413 agagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||| |||||||||||| |||||||| |||||    
T  13788151 agagagggattttacattttccctcactaaattttcctca 13788190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 44723065 - 44722932
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| | ||||||||||||| |||| ||| |||||||| |||||||||||| |||||||| |||||||||||    
T  44723065 ctactagaaaaagcaaaattagcgagggaaattaatgatggaaaaaatgaaattccttacaaattccttagtcgcaaaatttagtgacggaattagagag 44722966  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||||| |||||| ||| |||||| |||||||    
T  44722965 ggatttcatattttctctcactaaatatccctca 44722932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 319 - 451
Target Start/End: Original strand, 28319581 - 28319713
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  28319581 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 28319680  T
Q  419 ggatttcacattttccctctctaaatttccctc 451  Q
    ||||||||| ||||||||| | |||||||||||    
T  28319681 ggatttcacgttttccctcacaaaatttccctc 28319713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 37552360 - 37552233
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||| |||| |||||||||||    
T  37552360 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaatgacggaattagagag 37552261  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| |||||||||||| ||||||||    
T  37552260 ggattttacattttccctcactaaattt 37552233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 41637751 - 41637618
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  41637751 ctactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 41637652  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||||| |||||    
T  41637651 ggatttcatgttttccctcactaaattttcctca 41637618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 41736305 - 41736172
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| ||  |||||||| ||||||||  ||||||||||    
T  41736305 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacgaaattagagag 41736206  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| |||||||||||| |||||||| |||||    
T  41736205 ggattttacattttccctcactaaattttcctca 41736172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 324 - 452
Target Start/End: Complemental strand, 1141664 - 1141536
Alignment:
Q  324 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    ||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||||||||||||||||||||    
T  1141664 agaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacagaattagagagggatt 1141565  T
Q  424 tcacattttccctctctaaatttccctca 452  Q
    |||| ||||||||| | ||||||||||||    
T  1141564 tcacgttttccctcacaaaatttccctca 1141536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 324 - 452
Target Start/End: Complemental strand, 32300579 - 32300451
Alignment:
Q  324 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    ||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| ||||||||||||||||    
T  32300579 agaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatt 32300480  T
Q  424 tcacattttccctctctaaatttccctca 452  Q
    |||| ||||||||| | ||||||||||||    
T  32300479 tcacgttttccctcacaaaatttccctca 32300451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 20065076 - 20065209
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  20065076 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgactgaattagagag 20065175  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| |||| |||| | ||||||||||||    
T  20065176 ggatttcacgtttttcctcacaaaatttccctca 20065209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 456
Target Start/End: Complemental strand, 27327749 - 27327612
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||  |||||  |||| |||||| ||||||| |||||||||||| |||| ||||||| |||||||| |||||| ||||    
T  27327749 ctactaggaaaagcaaaattagggatggaaatttgtgacggaaaacataaaattcctcacaaattccttagacgcaaaatttagtgacggaattaaagag 27327650  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
    ||||||||  ||||||||| ||||||||||||||||||    
T  27327649 ggatttcatgttttccctcactaaatttccctcattaa 27327612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 30783471 - 30783338
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| |  || |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  30783471 ctactaggaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattcctcacaaattcattggtcgcaaaatttagtgacggaattagagag 30783372  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  30783371 ggatttcatgttttccctcactaaatttccctca 30783338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 12779733 - 12779606
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||||||||  ||||||||||    
T  12779733 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattcattggtcgcaaaatttagtgacgaaattagagag 12779634  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    | |||| || ||||||||| ||||||||    
T  12779633 gaattttacgttttccctcactaaattt 12779606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 43408513 - 43408636
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  43408513 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 43408612  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  43408613 ggattttacgttttccctcactaa 43408636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 32009086 - 32008952
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||||||||||||||||| | |||  |||| ||||| |||||||| | |||| |||||||||||| || ||||||||| |||||||| ||||||||||    
T  32009086 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaga 32008987  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    ||||||| || |||||||||  |||||||||||||    
T  32008986 gggattttacgttttccctcattaaatttccctca 32008952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 15636737 - 15636870
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||| ||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| ||||||||  ||||||||||    
T  15636737 ctaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacgaaattagagag 15636836  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  15636837 ggatttcacgttttccctcacaaaatttccctca 15636870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 18551255 - 18551388
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| ||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| ||| |||||||| |||||||| |||||||||||    
T  18551255 ctactaaaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttaatcgcaaaatttagtgacggaattagagag 18551354  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| |  ||||||||| |||||| |||||||    
T  18551355 ggattttatgttttccctcactaaatatccctca 18551388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 22140366 - 22140499
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  22140366 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 22140465  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| |||||  || | ||||||||||||    
T  22140466 ggatttcacgttttctttcacaaaatttccctca 22140499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 28841344 - 28841477
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| ||||| ||| | ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  28841344 ctactaggaaaagcaaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 28841443  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||| | |||||| |||||||    
T  28841444 ggatttcatgttttcccacactaaatatccctca 28841477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 320 - 452
Target Start/End: Complemental strand, 28262496 - 28262364
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||||||||| |||||| |  || ||||| ||||||||||||||| |||| |||||||||||   | ||| ||||| |||||||| ||||||||||||    
T  28262496 tactagaaaaagtaaaattagcaagggaaattagtgatggaaaaaatgaaattcctcacaaatttcatggtcacaaaatttagtgacggaattagagagg 28262397  T
Q  420 gatttcacattttccctctctaaatttccctca 452  Q
    |||||||| ||||||||| | ||||||||||||    
T  28262396 gatttcacgttttccctcacaaaatttccctca 28262364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 7093701 - 7093578
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| ||||||||| ||||||||||    
T  7093701 ctactagtaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacaaaattagagag 7093602  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  7093601 ggattttacgttttccctcactaa 7093578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 358 - 452
Target Start/End: Complemental strand, 31266448 - 31266354
Alignment:
Q  358 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||||||||||  ||||||||| ||||||||||||||    
T  31266448 ggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcgctaaatttccctca 31266354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 322 - 452
Target Start/End: Original strand, 37723997 - 37724127
Alignment:
Q  322 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    |||||||||| |||||  | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| | ||||| ||||||    
T  37723997 ctagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggtattagcgaggga 37724096  T
Q  422 tttcacattttccctctctaaatttccctca 452  Q
    |||||| ||||||||| ||||||||| ||||    
T  37724097 tttcacgttttccctcactaaatttctctca 37724127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 2556228 - 2556095
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| |||||| |||||| |||||  |||| ||||||||||||||||||||  ||||||||||  || || | |||| |||||||| ||||||||||     
T  2556228 ctactaaaaaaagtaaaattagagaggaaaattagtgatggaaaaaataaaatttctcacaaatttcttggttgtaaaatttagtgacggaattagagaa 2556129  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
      ||||||||||||||||||||||| ||||||||    
T  2556128 aaatttcacattttccctctctaaaattccctca 2556095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 8430429 - 8430296
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | | | ||||| ||||| |||||||||||||| |||||||||||   |  ||| |||| |||||||| |||||||||||    
T  8430429 ctactagaaaaaacaaaattagcgggggaaattagtgacggaaaaaataaaattcctcacaaattttatgatcgtaaaatttagtgacggaattagagag 8430330  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  8430329 ggatttcacgttttccctcacaaaatttccctca 8430296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 21293713 - 21293846
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| ||||  |||||||||||  | |||| |||| |||||||| |||||||||||    
T  21293713 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccatggtcgtaaaatttagtgacggaattagagag 21293812  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||| ||||||||| | ||||||||||||    
T  21293813 agatttcacgttttccctcacaaaatttccctca 21293846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 23388380 - 23388513
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| |||||  |||| ||||||||| |||| | |||||||||   | ||||||||| |||||||| |||||||||||    
T  23388380 ctactagaaaaaacaaaattagcgagggaaattggtgacggaaaaaatgaaattcttcacaaatttcatggtcgcaaaatttagtgacggaattagagag 23388479  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  23388480 ggatttcacgttttccctcacaaaatttccctca 23388513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 29749405 - 29749538
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  || |||||  |||| |||||| ||||||| |||||||||||  || ||||||||| |||||||| ||||||| |||    
T  29749405 ctactagaaaaagcaaaattaggaagggaaatttgtgacggaaaacataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagggag 29749504  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||||| |||||    
T  29749505 ggatttcatgttttccctcactaaattttcctca 29749538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 32185965 - 32185832
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| |||| ||||||   | |||| |||| |||||||| |||||||||||    
T  32185965 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcgcaaatttcatggtcgtaaaatttagtgacggaattagagag 32185866  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  32185865 ggatttcacgttttccctcacaaaatttccctca 32185832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 450
Target Start/End: Original strand, 13613095 - 13613226
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||| ||||||| |||||| | |||  |||| ||||| | ||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  13613095 ctactggaaaaagaaaaattagcgaggaaaattagtgacgaaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 13613194  T
Q  419 ggatttcacattttccctctctaaatttccct 450  Q
    |||||| || ||||||||| ||||| ||||||    
T  13613195 ggattttacgttttccctcactaaacttccct 13613226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 44476377 - 44476492
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| | |||||||||| || ||||||||| |||||||| |||||||||||    
T  44476377 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcttcacaaattccttggtcgcaaaatttagtgacggaattagagag 44476476  T
Q  419 ggatttcacattttcc 434  Q
     ||||| || ||||||    
T  44476477 agattttacgttttcc 44476492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 314 - 444
Target Start/End: Complemental strand, 36550973 - 36550844
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| |||||||||||| ||||||| ||||| ||||| ||||||||||||||| |||| |||||||| ||  || ||||||||| |||||||  ||||||    
T  36550973 ttacactactagaaaaaacaaaattagagagggaaattagtgatggaaaaaat-aaatccctcacaagttatttggtcgcaaaatttagtgatggaatta 36550875  T
Q  414 gagagggatttcacattttccctctctaaat 444  Q
     ||||||||||||  ||||||||| ||||||    
T  36550874 tagagggatttcatgttttccctcactaaat 36550844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 23857960 - 23858086
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| || |||| | |||| |||||||||||| || ||||||||| |||||||| ||||||||||     
T  23857960 ctactagaaaaagcaaaattagcgagggaaattagtgacgggaaaa-tgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaa 23858058  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
     ||||| || ||||||||| ||||||||    
T  23858059 tgattttacgttttccctcactaaattt 23858086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 40018935 - 40018808
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| |||||||  | || ||||| ||||| ||||||||||||||  || ||||||||||| || |||||| | ||||| ||||||||||||    
T  40018935 ctactagaaaaaacaaaattaaaaagggaaattagtgacggaaaaaataaaatttcttacaaattcgttggttgcaaaattcagtgagagaattagagag 40018836  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
     |||||||  ||||||||| ||||||||    
T  40018835 agatttcatgttttccctcactaaattt 40018808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 444
Target Start/End: Original strand, 14757123 - 14757248
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||   |||| | ||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  14757123 ctactagaaaaagcaaaattagcgaagaaaattaatgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 14757222  T
Q  419 ggatttcacattttccctctctaaat 444  Q
     |||||||  ||||||||| ||||||    
T  14757223 agatttcatgttttccctcactaaat 14757248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 412
Target Start/End: Original strand, 27039910 - 27040003
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatt 412  Q
    |||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||    
T  27039910 ctactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaatt 27040003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 37802381 - 37802513
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | |||||||||   ||| ||||||||||||||  ||| ||| ||  || ||||||||| |||||||| ||||||||||     
T  37802381 ctactaggaaaagcaaaattagggagagaaattgatgacggaaaaaataaaatctctcgcaatttt-ttggtcgcaaaatttagtgacggaattagagac 37802479  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||||| || ||||||||||||||||||||||||    
T  37802480 tgattttacgttttccctctctaaatttccctca 37802513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 38362276 - 38362396
Alignment:
Q  322 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    ||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| | ||||||||||||||| | |||    
T  38362276 ctagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgtaaaattaagtgacagaattagaaaagga 38362375  T
Q  422 tttcacattttccctctctaa 442  Q
    ||| || ||||||||| ||||    
T  38362376 ttttacgttttccctcgctaa 38362396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 361 - 452
Target Start/End: Original strand, 18916444 - 18916535
Alignment:
Q  361 aaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||| |||||||||||  ||  |||||||| |||||||| |||||||||||||||||||  ||||||||| ||||||||| ||||    
T  18916444 aaaaataaaatccctcacaaattttttgatcgcaaaatttagtgactgaattagagagggatttcatgttttccctccctaaatttctctca 18916535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 26243323 - 26243446
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||  || ||||||||||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  26243323 ctactagaaaaagcaaaattaacgagggaaattagtggcggtaaaaataaaattcctcacaaattcattggtcgtaaaatttagtgacggaattagagag 26243422  T
Q  419 ggatttcacattttccctctctaa 442  Q
    | |||| || |||| |||| ||||    
T  26243423 gaattttacgtttttcctcactaa 26243446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 327 - 452
Target Start/End: Original strand, 44366007 - 44366132
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||| ||||||| ||||| ||||| | |||  ||||||||||||| ||||||||||||||| ||| ||||| | | |||  |||||||||||||||||||    
T  44366007 aaaaacaaaattagagagggaaattaatgacagaaaaaataaaattcctcacaaattcgttggtcacaaaattcaatgagggaattagagagggatttca 44366106  T
Q  427 cattttccctctctaaatttccctca 452  Q
      |||| |||| ||||| ||||||||    
T  44366107 tgtttttcctcactaaacttccctca 44366132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 346 - 446
Target Start/End: Original strand, 13134649 - 13134749
Alignment:
Q  346 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 445  Q
    ||||| ||||| |||||||||||||| |||||||| ||  ||||||| |||| ||| ||||| ||||||| ||||||||||  |||||| ||||||||||    
T  13134649 gaaattagtgacggaaaaaataaaatccctcacaatttttttagtcgtaaaatttattgacaaaattagaaagggatttcaagttttccatctctaaatt 13134748  T
Q  446 t 446  Q
    |    
T  13134749 t 13134749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 26687692 - 26687826
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaa-aataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||||| |||||||||||   ||| ||||| | ||| |||||| ||||||||  ||||||||||| || || |||||| |||||||| ||||||||||    
T  26687692 ctactagataaagcaaaattaaggagggaaattaatgacggaaaaaaataaaatttctcacaaattccttggttgcaaaatttagtgacggaattagaga 26687791  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
     ||||||||  |||||| || ||||||||| ||||    
T  26687792 tggatttcatgttttccgtcactaaatttcgctca 26687826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 379 - 452
Target Start/End: Complemental strand, 27523084 - 27523011
Alignment:
Q  379 aaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| |||||||| |||||||||||||||||||  ||||||||| |||||| |||||||    
T  27523084 aaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctca 27523011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 358 - 452
Target Start/End: Complemental strand, 36373992 - 36373900
Alignment:
Q  358 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||| |||| ||||||| ||  ||| |||| |||||||| |||||  ||||| ||||||||||||||||| |||||||| |||||    
T  36373992 ggaaaaaataaaatccctctcaaattccttgatcgtaaaatttagtgactgaatt--agaggaatttcacattttccctcactaaattttcctca 36373900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 352 - 452
Target Start/End: Original strand, 9004343 - 9004443
Alignment:
Q  352 agtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctc 451  Q
    ||||| |||| |||| ||||  |||| |||||| |||||  ||||| |||||||  |||||||||||  |||| |||||||||||| |||||||||||||    
T  9004343 agtgacggaagaaatgaaatttctcataaattccttagttacaaaatttagtgatggaattagagagaaattttacattttccctcactaaatttccctc 9004442  T
Q  452 a 452  Q
    |    
T  9004443 a 9004443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 22192312 - 22192248
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaatt 383  Q
    |||||||||||||||||||  | ||||||||| ||||| ||||||||||||||  ||||||||||    
T  22192312 ctactagaaaaagcaaaatcagggagagaaattagtgacggaaaaaataaaatctctcacaaatt 22192248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 358 - 426
Target Start/End: Complemental strand, 35697549 - 35697481
Alignment:
Q  358 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    ||||||||||||||  ||||||||||  || ||||||||| |||||||| |||||||||||| ||||||    
T  35697549 ggaaaaaataaaatctctcacaaattttttggtcgcaaaatttagtgacggaattagagaggaatttca 35697481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 452
Target Start/End: Original strand, 27058404 - 27058451
Alignment:
Q  405 acagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||||||||| || ||||||||| ||||||||||||||    
T  27058404 acagaattagagagggattttacgttttccctcactaaatttccctca 27058451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 409 - 452
Target Start/End: Original strand, 16098996 - 16099039
Alignment:
Q  409 aattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||||||||  |||||||||||||| ||||||||    
T  16098996 aattagagagggatttcacgctttccctctctaaaattccctca 16099039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 31966555 - 31966633
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||| ||||| |||||||||||||| ||| | |||||| || ||||||||| ||||| ||| |||||||||| |||||||    
T  31966555 aaattagtgacggaaaaaataaaatccct-ataaattccttggtcgcaaaatttagtaacataattagagagagatttca 31966633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 9590532 - 9590470
Alignment:
Q  390 tcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||| ||||| ||| |||||||||| |||||||| ||||  ||| ||||||||||||||    
T  9590532 tcgcaaaatttagtaacaaaattagagagcgatttcacgtttttgctcgctaaatttccctca 9590470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 347 - 449
Target Start/End: Complemental strand, 18609619 - 18609517
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| ||| |||||| ||| |||||||||||| ||  |||||||| || || |   ||||||||||| ||||||  ||||||||| ||||||||    
T  18609619 aaattagtgacggagaaaatagaatccctcacaaattccttgatcgcaaaattttgtcatgaaattagagaggtatttcatgttttccctcactaaattt 18609520  T
Q  447 ccc 449  Q
    |||    
T  18609519 ccc 18609517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 446
Target Start/End: Complemental strand, 8763757 - 8763640
Alignment:
Q  329 aagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcaca 428  Q
    |||||||||| | |||| || | ||||| ||||||||||||||  | ||||||||| ||  ||  |||| ||| |||| |||||||||| ||||||||      
T  8763757 aagcaaaattagggagaaaagttagtgacggaaaaaataaaatctcgcacaaattccttgatcataaaatttaatgacggaattagagatggatttcatg 8763658  T
Q  429 ttttccctctctaaattt 446  Q
    |||||| || ||||||||    
T  8763657 ttttccttcactaaattt 8763640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 6e-36; HSPs: 68)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 17103867 - 17104000
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| |||||||||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  17103867 ctactagaaaaaacaaaattagagagagaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 17103966  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  17103967 ggatttcatgttttccctcactaaatttccctca 17104000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 17824618 - 17824751
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| ||||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  17824618 ctactagaaaaagcaaaattagagagggaaatttgtgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 17824717  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  17824718 ggatttcatgttttccctcactaaatttccctca 17824751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 318 - 452
Target Start/End: Original strand, 9915042 - 9915175
Alignment:
Q  318 gctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    ||||||||||||||||||||| | ||||||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||||| ||||||||    
T  9915042 gctactagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccat-gtcgcaaaatttagtgacaggattagaga 9915140  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||| ||||||||| | ||||||||||||    
T  9915141 gggatttcacgttttccctcacaaaatttccctca 9915175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 8824960 - 8824837
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||||||||||||| |||| ||||||| |||| |||||||||||| |||||||| |||||||||||    
T  8824960 ctactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatcaaattcctcacagattccttagtcgcaaaatttagtgacggaattagagag 8824861  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| ||||||| |||| ||||    
T  8824860 ggattttacatttttcctcactaa 8824837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 30688071 - 30687944
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| |||||||||||  |||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  30688071 ctactagaaaaagcaaaattagcgagggaaatcagtgaccgaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 30687972  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| ||||||||| || ||||||||    
T  30687971 ggattttacattttccttcactaaattt 30687944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 314 - 444
Target Start/End: Complemental strand, 27869378 - 27869248
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| |||||||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||    
T  27869378 ttacactactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaatta 27869279  T
Q  414 gagagggatttcacattttccctctctaaat 444  Q
    ||||| |||||||  ||||||||| ||||||    
T  27869278 gagagagatttcatgttttccctcactaaat 27869248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 3823264 - 3823135
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| |||||||||||||||    
T  3823264 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattctttggtcgcaaaatttagtgacggaattagagagggat 3823165  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    || || ||||||||| ||||||||||||||    
T  3823164 tttacgttttccctcactaaatttccctca 3823135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 4331113 - 4330980
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  4331113 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 4331014  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | ||||||| ||||||||| | ||||||||||||    
T  4331013 gaatttcacgttttccctcacaaaatttccctca 4330980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 4647757 - 4647890
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   ||||||||||| |||||||| |||||||||||    
T  4647757 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatagtcgcaaaatttagtgacggaattagagag 4647856  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||||||||| | ||||||| ||||    
T  4647857 ggatttcacattttccctcacaaaatttctctca 4647890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 8555306 - 8555439
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  8555306 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 8555405  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||||| |  ||||||||| ||||||||||||||    
T  8555406 agattttatgttttccctcactaaatttccctca 8555439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 19241002 - 19240869
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  19241002 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19240903  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | |||| || ||||||||| | ||||||||||||    
T  19240902 gaattttacgttttccctcacaaaatttccctca 19240869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 19314186 - 19314053
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  19314186 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19314087  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | |||| || ||||||||| | ||||||||||||    
T  19314086 gaattttacgttttccctcacaaaatttccctca 19314053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 24576026 - 24576159
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  24576026 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 24576125  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||  ||||||||| |||||| |||||||    
T  24576126 agatttcatgttttccctcgctaaatatccctca 24576159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 27910766 - 27910899
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| |||||| ||||| |||||||| |||||||||||    
T  27910766 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcacaaaatttagtgacggaattagagag 27910865  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  |||||||||  ||||| |||||||    
T  27910866 ggatttcatgttttccctcagtaaatatccctca 27910899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 27957185 - 27957318
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| |||||| ||||| |||||||| |||||||||||    
T  27957185 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcacaaaatttagtgacggaattagagag 27957284  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  |||||||||  ||||| |||||||    
T  27957285 ggatttcatgttttccctcagtaaatatccctca 27957318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 29345206 - 29345073
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||||||||   |||||||||  ||||| |||||| |||||||| ||||||| |||    
T  29345206 ctactagaaaaagaaaaattagggagggaaattagtgacggaaaaaataaaatctttcacaaatttcttagtggcaaaatttagtgacggaattagggag 29345107  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||||||||||||||||||    
T  29345106 ggatttcacgttttccctctctaaatttccctca 29345073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 13060933 - 13061056
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||||||    
T  13060933 ctactagcaaaagcaaaattagcgaggtaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacagaattagagag 13061032  T
Q  419 ggatttcacattttccctctctaa 442  Q
    ||||||||  ||||||||| ||||    
T  13061033 ggatttcatgttttccctcactaa 13061056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 19256347 - 19256220
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||| |||||||||||||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  19256347 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 19256248  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || ||||||||| ||||||||    
T  19256247 ggattttacgttttccctcactaaattt 19256220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 19488063 - 19488186
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  19488063 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19488162  T
Q  419 ggatttcacattttccctctctaa 442  Q
    | |||||| |||||||||| ||||    
T  19488163 gaatttcatattttccctcactaa 19488186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 314 - 452
Target Start/End: Original strand, 18010057 - 18010195
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| |||| ||||||||||||||| | ||||||||| ||||| ||||||||| |||| |||||||||||| ||  |||||||| |||||||| ||||||    
T  18010057 ttacactaccagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaatta 18010156  T
Q  414 gagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||  |||||||||  ||||| |||||||    
T  18010157 gagagggatttcatgttttccctcaataaatatccctca 18010195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 25655860 - 25655978
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| ||||||| ||||||||||||    
T  25655860 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgatagaattagagag 25655959  T
Q  419 ggatttcacattttccctc 437  Q
    ||||||||| |||||||||    
T  25655960 ggatttcacgttttccctc 25655978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 6817189 - 6817056
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  ||  |||||||||| ||||||||| |||| |||||||||||  || ||| ||||| |||||||| |||||||||||    
T  6817189 ctactagaaaaagcaaaattagcaaggaaaatcagtgacggaaaaaatgaaattcctcacaaatttcttggtcacaaaatttagtgacggaattagagag 6817090  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||||| |||||||||||| ||||||||||||||    
T  6817089 agattttacattttccctcactaaatttccctca 6817056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 32961794 - 32961661
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| ||||||||||||| | ||| |||||||||||  |||||||| |||| |||||||||||  || ||||||||  |||||||| |||||||||||    
T  32961794 ctactaaaaaaagcaaaattagcgagggaaatcagtgacagaaaaaatgaaattcctcacaaatttcttggtcgcaaagtttagtgacggaattagagag 32961695  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | |||| |||||||||||| ||||||||||||||    
T  32961694 gaattttacattttccctcactaaatttccctca 32961661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 43431561 - 43431694
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || || |||||| ||||||||  ||||||||||    
T  43431561 ctactagaaaaagaaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggttgcaaaatttagtgacgaaattagagag 43431660  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  43431661 ggattttacgttttccctcactaaatttccctca 43431694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 11938879 - 11938753
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||| | |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  11938879 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaa-tgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 11938781  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || ||||||||| ||||||||    
T  11938780 ggattttacgttttccctcactaaattt 11938753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 32248044 - 32247921
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  32248044 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatttagtgacggaattagagag 32247945  T
Q  419 ggatttcacattttccctctctaa 442  Q
    ||||||||| ||||||||| ||||    
T  32247944 ggatttcacgttttccctcactaa 32247921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 17810433 - 17810300
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||  || ||||||||| ||||||||  ||||||||||    
T  17810433 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacgaaattagagag 17810334  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  17810333 ggatttcatgttttccctcactaaatatccctca 17810300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 21350613 - 21350480
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||  |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||     
T  21350613 ctactagaaaaagcaaaataagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagat 21350514  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || |||| |||| ||||||||||||||    
T  21350513 ggattttacgtttttcctcactaaatttccctca 21350480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 444
Target Start/End: Complemental strand, 22939448 - 22939323
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||  ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  22939448 ctactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcacaaattcctttgtcgcaaaatttagtgacggaattagagag 22939349  T
Q  419 ggatttcacattttccctctctaaat 444  Q
     |||||||  ||||||||| ||||||    
T  22939348 agatttcatgttttccctcactaaat 22939323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 33652702 - 33652569
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||| ||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| || |||||||     
T  33652702 ctaccagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggagttagagaa 33652603  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  33652602 ggatttcatgttttccctcactaaatatccctca 33652569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 26399036 - 26399132
Alignment:
Q  346 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 442  Q
    ||||| ||||| ||||||||||||||  |||||||||||||| ||||||||| |||||||| |||||||||||||||||||| ||||||||| ||||    
T  26399036 gaaattagtgacggaaaaaataaaatctctcacaaattcgttggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaa 26399132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 316 - 452
Target Start/End: Complemental strand, 37992237 - 37992101
Alignment:
Q  316 acgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattaga 415  Q
    |||||||||| |||||||||||| | |||  |||| ||||| |||||| ||||||| | ||||| |||| |||||||||||| |||||||| ||||||||    
T  37992237 acgctactaggaaaagcaaaattagggaggaaaattagtgacggaaaacataaaatccttcacatattctttagtcgcaaaatttagtgacggaattaga 37992138  T
Q  416 gagggatttcacattttccctctctaaatttccctca 452  Q
    ||| |||||||  ||||||||| |||||||| |||||    
T  37992137 gagagatttcatgttttccctcactaaattttcctca 37992101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 25000433 - 25000560
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| ||||||||| || || ||||| |||||||||||    
T  25000433 ctactagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcagaattttgtgacggaattagagag 25000532  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||| | || ||||||||| ||||||||    
T  25000533 ggatgttacgttttccctcactaaattt 25000560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 6816385 - 6816518
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| ||||||| |||| | ||| ||||| ||||||| ||||||||||||  ||||||||||| || || |||||| |||||| | |||||||||||    
T  6816385 ctactaggaaaagcataattagcgagggaaattagtgatgaaaaaaataaaatttctcacaaattccttggttgcaaaatttagtggcggaattagagag 6816484  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  6816485 ggatttcatgttttccctcactaaatatccctca 6816518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 448
Target Start/End: Complemental strand, 15251736 - 15251608
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||| |||||||||||||| | ||| ||||| ||||| ||||||||||||||  ||||| | ||  || ||||||||| |||||||||||||||||||     
T  15251736 ctacttgaaaaagcaaaattagggagggaaattagtgacggaaaaaataaaatctctcacgatttt-ttggtcgcaaaatttagtgacagaattagagaa 15251638  T
Q  419 ggatttcacattttccctctctaaatttcc 448  Q
    ||||||||| |||||||||| |||||||||    
T  15251637 ggatttcacgttttccctctttaaatttcc 15251608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 24193198 - 24193331
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  24193198 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 24193297  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||  ||||||||| | ||||||| ||||    
T  24193298 agatttcatgttttccctcacaaaatttctctca 24193331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 323 - 442
Target Start/End: Original strand, 23752292 - 23752411
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| || || ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| ||||||||||| |||    
T  23752292 tagaaaaagcaaaattagcgagggatattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagagtgat 23752391  T
Q  423 ttcacattttccctctctaa 442  Q
    || |||||||||||| ||||    
T  23752392 tttacattttccctcactaa 23752411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 25273330 - 25273452
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||| | ||||||| |||  |||||||||||| || ||||||||| ||||||||||||||||||||    
T  25273330 ctactagaaaaagcaaaattaacgagggaaattagtgacg-aaaaaatgaaagtcctcacaaattctttggtcgcaaaatttagtgacagaattagagag 25273428  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  25273429 ggattttacgttttccctcactaa 25273452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 30466956 - 30467083
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||| |||||| ||||| |||||  || ||||||||| |||||||  |||||||||||    
T  30466956 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaattaaaattcctcataaatttcttggtcgcaaaatttagtgatggaattagagag 30467055  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
     ||||| || ||||||||| ||||||||    
T  30467056 agattttacgttttccctcactaaattt 30467083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 31399510 - 31399633
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| |||||||   ||| ||||| ||||||| ||||||| |||| ||||||||||||  | ||||||||| |||||||| ||||||||||     
T  31399510 ctactagaaaaaacaaaattaacgagggaaattagtgatgaaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagat 31399609  T
Q  419 ggatttcacattttccctctctaa 442  Q
    ||||||||| ||||||||| ||||    
T  31399610 ggatttcacgttttccctcactaa 31399633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 29351059 - 29350925
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtga-tggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||||||||||||||||| | ||| ||||| ||||| | |||||||| |||| |||||||||||   | ||||||||| ||||||||  |||||||||    
T  29351059 ctactagaaaaagcaaaattagcgagggaaattagtgactagaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacgcaattagaga 29350960  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||  ||||||||| |||||| |||||||    
T  29350959 gggatttcatgttttccctcactaaatatccctca 29350925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 16061941 - 16062074
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | |||||||||  ||||||| |||||||||||    
T  16061941 ctactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgcaaaatgtagtgacggaattagagag 16062040  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||| |||| ||||   ||||||||||||    
T  16062041 tgatttcacgtttttcctcaaaaaatttccctca 16062074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 327 - 452
Target Start/End: Original strand, 31344182 - 31344307
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    ||||| |||||| ||||  ||||| ||||||||||||||| ||||  |||| |||||  ||  |||||||| ||| |||| |||||||||||| ||||||    
T  31344182 aaaagtaaaattagagaaggaaattagtgatggaaaaaatcaaatttctcataaatttcttgatcgcaaaatttaatgacggaattagagaggaatttca 31344281  T
Q  427 cattttccctctctaaatttccctca 452  Q
    ||||||||||||||||| ||||||||    
T  31344282 cattttccctctctaaaattccctca 31344307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 346 - 446
Target Start/End: Original strand, 5670198 - 5670298
Alignment:
Q  346 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 445  Q
    ||||| ||||| |||||||||  ||| |||||||||||| || ||||||||| |||||||| ||||||||||||||||| || ||||||||| |||||||    
T  5670198 gaaattagtgacggaaaaaatggaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaaatt 5670297  T
Q  446 t 446  Q
    |    
T  5670298 t 5670298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 24636788 - 24636660
Alignment:
Q  319 ctactagaaaa-agcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    ||||||||||| |||||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||  ||  |||||||| |||||||| ||||||||||    
T  24636788 ctactagaaaatagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagaga 24636689  T
Q  418 gggatttcacattttccctctctaaattt 446  Q
    ||||||| || ||||||||| ||||||||    
T  24636688 gggattttacgttttccctcactaaattt 24636660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 314 - 452
Target Start/End: Original strand, 18844541 - 18844679
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| ||||||| |||||||||||| | ||  | |||  ||||||||||| ||||||| |||||||||||  || ||||||||| ||| | ||| |||||    
T  18844541 ttacactactaggaaaagcaaaattagggatggtaatttgtgatggaaaacataaaattcctcacaaattttttggtcgcaaaatttaataacaaaatta 18844640  T
Q  414 gagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||  |||||| || ||||||||||||||    
T  18844641 gagagggatttcatgttttccttcactaaatttccctca 18844679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 323 - 451
Target Start/End: Original strand, 6084252 - 6084378
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | |||| |||| ||||| ||||||||||||||  ||| ||||||| || |||  |||| |||||||| ||||||||||| |||    
T  6084252 tagaaaaagcaaaattagggagataaattagtgacggaaaaaataaaat--ctcccaaattccttggtctaaaaatttagtgacggaattagagagagat 6084349  T
Q  423 ttcacattttccctctctaaatttccctc 451  Q
    || ||||||||  ||||||||||| ||||    
T  6084350 ttgacattttcagtctctaaatttacctc 6084378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 451
Target Start/End: Complemental strand, 9631539 - 9631406
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgac-agaattagaga 417  Q
    |||||||||||||||||||| |  ||  |||| ||||| |||||||||||||| ||||||||||||  || |||||||| ||||||||  ||||||||||    
T  9631539 ctactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaataaaattcctcacaaattctatactcgcaaaatttagtgacgggaattagaga 9631440  T
Q  418 gggatttcacattttccctctctaaatttccctc 451  Q
    |  ||||||| |||||| || | |||||||||||    
T  9631439 gaaatttcacgttttccttcacaaaatttccctc 9631406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 40289423 - 40289555
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||  |||||| | |||  |||| ||||| ||||||||| || |  ||||||||||| || ||||||||| |||||||| ||||||| |||    
T  40289423 ctactagaaaaattaaaattagcgaggaaaattagtgacggaaaaaatgaattttctcacaaattccttggtcgcaaaatttagtgacggaattag-gag 40289521  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  40289522 ggattttacgttttccctcactaaatttccctca 40289555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 452
Target Start/End: Original strand, 3692176 - 3692306
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaa-aataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    |||||||| ||||||  | ||||||||| |||||| ||||| |||||||| |||||||||||| ||||||  |||| ||||| |  |||||||||| |||    
T  3692176 tagaaaaaacaaaatcagggagagaaataagtgatagaaaaaaataaaattcctcacaaattctttagtcataaaatttagtaatggaattagagaagga 3692275  T
Q  422 tttcacattttccctctctaaatttccctca 452  Q
    ||| || |||| ||||| |||||||||||||    
T  3692276 ttttacgttttacctctataaatttccctca 3692306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 358 - 452
Target Start/End: Complemental strand, 5879300 - 5879206
Alignment:
Q  358 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||| |||||||||||  || |||| |||| |||||||| |||||||||||| |||| || |||| |||| ||||||||||||||    
T  5879300 ggaaaaaataaaattcctcacaaatttcttggtcgtaaaatttagtgacggaattagagaggcattttacgtttttcctcactaaatttccctca 5879206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 352 - 424
Target Start/End: Original strand, 19493690 - 19493762
Alignment:
Q  352 agtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggattt 424  Q
    ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||||||||    
T  19493690 agtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggattt 19493762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 21219242 - 21219350
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||  | ||||||||| ||||| ||||||||| ||||  |||| |||||  || ||||||||| |||||||  |||||||||||    
T  21219242 ctactagaaaaagaaaaatcagcgagagaaattagtgacggaaaaaatgaaattactcataaattttttggtcgcaaaatttagtgatggaattagagag 21219341  T
Q  419 ggatttcac 427  Q
    |||||||||    
T  21219342 ggatttcac 21219350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 319 - 403
Target Start/End: Original strand, 42700659 - 42700743
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagt 403  Q
    ||||||||||||| |||||| | |||  |||||||||| ||||||||| |||| |||||||||||| |||||||||||| |||||    
T  42700659 ctactagaaaaagtaaaattagcgaggaaaatcagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagt 42700743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 319 - 421
Target Start/End: Complemental strand, 8789975 - 8789873
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | |||  ||||  ||||  ||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  8789975 ctactaggaaaagcaaaattagggaggaaaatttgtgactgaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 8789876  T
Q  419 gga 421  Q
    |||    
T  8789875 gga 8789873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 314 - 442
Target Start/End: Original strand, 33412974 - 33413095
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| ||||||||||||| |||||| | ||| ||||| ||| | ||||||||| |||| ||||||||||||      ||||||| |||||||| ||||||    
T  33412974 ttacactactagaaaaag-aaaattagcgagggaaattagtaacggaaaaaatgaaattcctcacaaattc------cgcaaaatttagtgacggaatta 33413066  T
Q  414 gagagggatttcacattttccctctctaa 442  Q
    ||||||||||| || ||||||||| ||||    
T  33413067 gagagggattttacgttttccctcactaa 33413095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 423
Target Start/End: Complemental strand, 10917962 - 10917858
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| |||||  |||| |||||| ||||||| ||||| |||||  ||  | |||||| |||||||| |||||||||||    
T  10917962 ctactagaaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaatttcttgattgcaaaatttagtgacggaattagagag 10917863  T
Q  419 ggatt 423  Q
    |||||    
T  10917862 ggatt 10917858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 314 - 446
Target Start/End: Complemental strand, 17003402 - 17003270
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| |||||||||||||||||||| | |||  |||| ||||  |||||||||||||  ||||| |||||| ||  || ||||| ||| |||| | ||||    
T  17003402 ttacactactagaaaaagcaaaattagggaggaaaattagtgtgggaaaaaataaaacccctcataaattccttgatcacaaaatttaatgactgtatta 17003303  T
Q  414 gagagggatttcacattttccctctctaaattt 446  Q
    |||||  |||| || ||||||||||||||||||    
T  17003302 gagagcaattttacgttttccctctctaaattt 17003270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 324 - 442
Target Start/End: Complemental strand, 14304359 - 14304241
Alignment:
Q  324 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    ||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||| ||||||   | |||  |||| |||||| ||||| || |||||||||    
T  14304359 agaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaatccctcgcaaatttcctcgtcataaaatttagtgccagaaataaagagggatt 14304260  T
Q  424 tcacattttccctctctaa 442  Q
    || | ||||||||| ||||    
T  14304259 tcgcgttttccctcactaa 14304241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 25274732 - 25274654
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaa 397  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || |||||||||    
T  25274732 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaa 25274654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 44595867 - 44595810
Alignment:
Q  477 ttaggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaaa 534  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||| ||||| ||||||    
T  44595867 ttaggttcgattctctttagtgtcaatttagatggactaatttagcttcttaaaaaaa 44595810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 24479874 - 24479925
Alignment:
Q  393 caaaagttagtgacagaattagagagggatttcacattttccctctctaaat 444  Q
    ||||| ||||||||||||||||||||| ||||||| |||||| |||||||||    
T  24479874 caaaatttagtgacagaattagagaggaatttcacgttttccttctctaaat 24479925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 43594328 - 43594273
Alignment:
Q  479 aggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaaa 534  Q
    |||||||||||||| |||| ||||||||||| | ||||||||||||||| ||||||    
T  43594328 aggttcgattctctctagtgtcaatttggatgggctaatttagtttcttaaaaaaa 43594273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 413
Target Start/End: Original strand, 2265407 - 2265474
Alignment:
Q  346 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    ||||| ||||| |||||||||||||| | |||||||||| ||  || ||||| |||||||||||||||    
T  2265407 gaaattagtgacggaaaaaataaaatccttcacaaattctttgatcacaaaatttagtgacagaatta 2265474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 27750796 - 27750851
Alignment:
Q  479 aggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaaa 534  Q
    ||||||||||| || |||| ||||||||||| ||||||||||| ||||| ||||||    
T  27750796 aggttcgattccctctagtgtcaatttggatggactaatttagcttcttaaaaaaa 27750851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 30241130 - 30241177
Alignment:
Q  477 ttaggttcgattctctttagtatcaatttggatagactaatttagttt 524  Q
    |||||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  30241130 ttaggttcgattatctttagtgtcaattttgatagactaatttggttt 30241177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 41527730 - 41527809
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||| ||||| |||||||||||||| ||||| |||||| ||  |||||||| ||||| ||| |||||| ||| |||||||    
T  41527730 aaattagtgacggaaaaaataaaatccctcataaattccttgatcgcaaaatttagtaacataattagggagagatttca 41527809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 534
Target Start/End: Complemental strand, 11492085 - 11492028
Alignment:
Q  477 ttaggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaaa 534  Q
    ||||||||||||||||| ||| ||||||||| | | ||||||||| ||||| ||||||    
T  11492085 ttaggttcgattctcttcagtgtcaatttgggtgggctaatttagcttcttaaaaaaa 11492028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 6e-36; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 20959645 - 20959512
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | |||  |||||| ||| |||||||||||||| |||||||||||| ||||||| |||| |||||||| |||||||||||    
T  20959645 ctactagaaaaagtaaaattagggaggaaaatcactgacggaaaaaataaaattcctcacaaattccttagtcgtaaaatttagtgacggaattagagag 20959546  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||| ||||||||||||||||||||||||    
T  20959545 agatttcacgttttccctctctaaatttccctca 20959512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 323 - 452
Target Start/End: Original strand, 25652589 - 25652718
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| |||||||||||  |||||||| |||| |||||||||||| |||||||||||| || ||||| |||||||||||||||    
T  25652589 tagaaaaagcaaaattagcgagggaaatcagtgacagaaaaaatgaaattcctcacaaattccttagtcgcaaaattttgtgacggaattagagagggat 25652688  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    || |||||||||||| ||||||||||||||    
T  25652689 tttacattttccctcactaaatttccctca 25652718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 323 - 452
Target Start/End: Original strand, 11927792 - 11927921
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | |||| |||| || ||||||||||||||||| |||||||||||  || ||||||||| |||||||| |||||||||||||||    
T  11927792 tagaaaaagcaaaattagggagataaattagagatggaaaaaataaaatccctcacaaattacttcgtcgcaaaatttagtgacggaattagagagggat 11927891  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    ||||| |||||| |||||||| ||||||||    
T  11927892 ttcacgttttccgtctctaaaattccctca 11927921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 16121841 - 16121974
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||||||||||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  16121841 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagag 16121940  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  16121941 ggatttcatgttttccctcactaaatatccctca 16121974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 17039633 - 17039766
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  17039633 ctactagaaaaagcaaaattagtgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 17039732  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| ||| ||||||||||    
T  17039733 ggatttcacgttttccctcactatatttccctca 17039766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 33818563 - 33818696
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  33818563 ctactagaaaaagcaaaattggggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 33818662  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  33818663 ggatttcatgttttccctcactaaatttccctca 33818696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 36196531 - 36196398
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||| ||  | ||||||||| |||||||| |||||||||||    
T  36196531 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaaatccatggtcgcaaaatttagtgacggaattagagag 36196432  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||||||||| | ||||||||||||    
T  36196431 ggatttcacattttccctcacaaaatttccctca 36196398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 313 - 452
Target Start/End: Original strand, 17036408 - 17036547
Alignment:
Q  313 cttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatt 412  Q
    ||||| ||||||||||| |||||||| | ||| || || ||||| |||| ||||||||| |||||||||||| || ||||||||| ||||||||||||||    
T  17036408 cttacactactagaaaatgcaaaattagggagcgagattagtgacggaagaaataaaattcctcacaaattccttggtcgcaaaatttagtgacagaatt 17036507  T
Q  413 agagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||  | ||||||||||||||||| ||||||    
T  17036508 agagagggattttgcgttttccctctctaaattaccctca 17036547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 618427 - 618298
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||||||    
T  618427 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggat 618328  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    ||||  ||||||||| |||||| |||||||    
T  618327 ttcatgttttccctcactaaatatccctca 618298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 456
Target Start/End: Original strand, 2472716 - 2472853
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||  ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||| |||| |||||||||||    
T  2472716 ctactagaaaaagcaaaattagtgaaggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagagag 2472815  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
    ||||||||  ||||||||| |||||| |||||||||||    
T  2472816 ggatttcatgttttccctcactaaatatccctcattaa 2472853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 8886853 - 8886986
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  ||||  |||| | ||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  8886853 ctactagaaaaagcaaaattagcgaggaaaatttgtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 8886952  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| |||||||||||| ||||||||||||||    
T  8886953 ggattttacattttccctcactaaatttccctca 8886986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 746870 - 746993
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||| ||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  746870 ctacaagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 746969  T
Q  419 ggatttcacattttccctctctaa 442  Q
    ||||||||| ||||||||| ||||    
T  746970 ggatttcacgttttccctcactaa 746993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 314 - 452
Target Start/End: Original strand, 10420249 - 10420387
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| |||||| | ||| ||||||| ||||| ||||| ||||| |||||||||||||| |||||||| || ||| ||||||||| ||||||||| |||||    
T  10420249 ttacactactaaagaaatcaaaattagagagggaaattagtgacggaaaaaataaaatccctcacaattttgttggtcgcaaaatttagtgacaaaatta 10420348  T
Q  414 gagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||  ||||||||||||||| || |||||    
T  10420349 gagagggatttcatgttttccctctctaaaatttcctca 10420387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 12045864 - 12045731
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || |||| |||| |||||||| ||||||||||     
T  12045864 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgtaaaatttagtgacggaattagagaa 12045765  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  12045764 ggattttacgttttccctcactaaatttccctca 12045731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 448
Target Start/End: Original strand, 13620129 - 13620258
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||  | ||| ||||| ||||| ||||||||||||||  |||||||||| ||| ||||||||| || |||||||||||||||||    
T  13620129 ctactagaaaaagaaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttgttggtcgcaaaattttgtgacagaattagagag 13620228  T
Q  419 ggatttcacattttccctctctaaatttcc 448  Q
    ||||||||  ||||||||| ||||||||||    
T  13620229 ggatttcatgttttccctcactaaatttcc 13620258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 323 - 456
Target Start/End: Original strand, 35620350 - 35620482
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| ||||| |||||||||||| | |||||||||||| || ||||||||| |||||||| |||||||||| ||||    
T  35620350 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaataaatt-cctcacaaattccttggtcgcaaaatttagtgacggaattagagaaggat 35620448  T
Q  423 ttcacattttccctctctaaatttccctcattaa 456  Q
    ||||  ||||||||| |||||| |||||||||||    
T  35620449 ttcatgttttccctcactaaatatccctcattaa 35620482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 38837673 - 38837796
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  38837673 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 38837772  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  38837773 ggattttacgttttccctcactaa 38837796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 23409118 - 23408984
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||||||||||||||||| | |||| |||| ||||| |||||||| | |||| |||||||||||  ||  |||||||| |||||||| ||||||||||    
T  23409118 ctactagaaaaagcaaaattagcgagaaaaattagtgacggaaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagaga 23409019  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    ||||||| || ||||||||| ||||||||||||||    
T  23409018 gggattttacgttttccctcactaaatttccctca 23408984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 326 - 452
Target Start/End: Complemental strand, 23975765 - 23975639
Alignment:
Q  326 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 425  Q
    ||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| ||||||||||||||||||    
T  23975765 aaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagagggatttc 23975666  T
Q  426 acattttccctctctaaatttccctca 452  Q
    || ||||||||| | ||||||||||||    
T  23975665 acgttttccctcacaaaatttccctca 23975639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 7888934 - 7888801
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| || ||||||||    
T  7888934 ctactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggagttagagag 7888835  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| |||||||| |||||    
T  7888834 ggattttacgttttccctcactaaattttcctca 7888801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 8108862 - 8108995
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  8108862 ctactagaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 8108961  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | ||||||  ||||||||| | ||||||| ||||    
T  8108962 gaatttcatgttttccctcacaaaatttctctca 8108995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 456
Target Start/End: Original strand, 28265477 - 28265614
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | |||  |||| ||||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  28265477 ctactagaaaaagtaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 28265576  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
    |||||| || | ||||||| | ||||||||||||||||    
T  28265577 ggattttacgtcttccctcacaaaatttccctcattaa 28265614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 327 - 448
Target Start/End: Original strand, 32726736 - 32726857
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| | ||| ||||| |||||||||||| ||||||  | | |||||||| || ||||||||| |||||||| |||||||||||  ||||||    
T  32726736 aaaagcaaaattagggagcgaaattagtgatggaaaatataaaacccttgacaaattccttggtcgcaaaatttagtgacggaattagagagaaatttca 32726835  T
Q  427 cattttccctctctaaatttcc 448  Q
    ||||||||||||||||||||||    
T  32726836 cattttccctctctaaatttcc 32726857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 36831892 - 36832025
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| || || | ||||||| |||| ||||| |||||| || ||| ||||| |||||||  |||||||||||    
T  36831892 ctactagaaaaagcaaaattagtgagggaaattagggacgaaaaaaatgaaattcctcataaattccttggtcacaaaatttagtgatggaattagagag 36831991  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| |||||||||||| ||||||||||||||    
T  36831992 ggattttacattttccctcactaaatttccctca 36832025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 4125190 - 4125313
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  4125190 ctactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 4125289  T
Q  419 ggatttcacattttccctctctaa 442  Q
     |||||||||||||||||| ||||    
T  4125290 agatttcacattttccctcactaa 4125313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 10494874 - 10494751
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||  | | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  10494874 ctactagaaaaagcaaatgtagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 10494775  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  10494774 ggattttacgttttccctcactaa 10494751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 26708587 - 26708714
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||| |||||||| | ||| ||||| ||||  ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  26708587 ctactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 26708686  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    | |||| || ||||||||| ||||||||    
T  26708687 gaattttacgttttccctcactaaattt 26708714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 26978321 - 26978448
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||| |||||||| | ||| ||||| ||||  ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  26978321 ctactagaaaatgcaaaattagcgagggaaattagtgccggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 26978420  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    | |||| || ||||||||| ||||||||    
T  26978421 gaattttacgttttccctcactaaattt 26978448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 319 - 448
Target Start/End: Original strand, 16472183 - 16472312
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagtt-agtgacagaattagaga 417  Q
    |||||||||||||||||||| | ||| ||||| ||||  | |||||||||||| | ||| ||||||||| |||||||||||| |||||||||||||||||    
T  16472183 ctactagaaaaagcaaaatttgggag-gaaattagtgtcgaaaaaaataaaatccttcaaaaattcgttggtcgcaaaagtttagtgacagaattagaga 16472281  T
Q  418 gggatttcacattttccctctctaaatttcc 448  Q
    | |||| ||| |||| |||||||||||||||    
T  16472282 gcgattccacttttttcctctctaaatttcc 16472312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 12328228 - 12328361
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||| | ||||||||| |||| |||||||||||  ||  |||||||| |||||||| |||||||||||    
T  12328228 ctactagaaaaagcaaaattagtgagggaaattagtaacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagagag 12328327  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | ||||||  ||||||||| |||||| |||||||    
T  12328328 gaatttcatgttttccctcactaaatatccctca 12328361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 15061110 - 15060977
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||| ||||||||||||||| | ||| ||||| |||||  |||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  15061110 ctaccagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 15061011  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| |||| |||| | ||||||||||||    
T  15061010 ggatttcacgtttttcctcacaaaatttccctca 15060977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 327 - 452
Target Start/End: Original strand, 27428022 - 27428147
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    ||||| |||||| | ||| ||||| ||||| | ||||||||||||  || | |||||| || ||||||||| |||||||| |||||||||||||||||||    
T  27428022 aaaagaaaaattagggagggaaattagtgacgaaaaaaataaaattgctaataaattctttggtcgcaaaatttagtgacggaattagagagggatttca 27428121  T
Q  427 cattttccctctctaaatttccctca 452  Q
    | |||||||||||||||||| |||||    
T  27428122 cgttttccctctctaaattttcctca 27428147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 434
Target Start/End: Original strand, 16631876 - 16631991
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  16631876 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagag 16631975  T
Q  419 ggatttcacattttcc 434  Q
    |||||| || ||||||    
T  16631976 ggattttacgttttcc 16631991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 25397790 - 25397913
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| | |||||||||| || ||||||||| |||||||| |||||||||||    
T  25397790 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcgtcacaaattctttggtcgcaaaatttagtgacggaattagagag 25397889  T
Q  419 ggatttcacattttccctctctaa 442  Q
    ||||||||  ||||||||| ||||    
T  25397890 ggatttcatgttttccctcactaa 25397913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 319 - 456
Target Start/End: Complemental strand, 5982783 - 5982645
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||||||||||||||||  | ||| ||||| ||||| |||||||| |  ||| |||||||||||| || ||||||||  |||||||| ||||||||||    
T  5982783 ctactagaaaaagcaaaatcagcgagggaaattagtgacggaaaaaaatggaattcctcacaaattccttggtcgcaaagtttagtgacggaattagaga 5982684  T
Q  418 gggatttcacattttccctctctaaatttccctcattaa 456  Q
    ||||||| |  ||||||||| |||||||| |||||||||    
T  5982683 gggattttaggttttccctcactaaattttcctcattaa 5982645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 7003732 - 7003863
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| ||||| |||||||| ||||| ||||||||||||  |  |||||||| |||||||| ||||||||||     
T  7003732 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcacaaattccatgatcgcaaaatttagtgacggaattagaga- 7003830  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||| ||||||||| | ||||||||||||    
T  7003831 -gatttcacgttttccctcacaaaatttccctca 7003863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 320 - 442
Target Start/End: Complemental strand, 35778277 - 35778155
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||||||||| |||||| | ||| ||||| ||||||||||||||||||||  ||||||||||| || ||||||||| ||| | ||||||| ||| |||    
T  35778277 tactagaaaaagtaaaatttgggagggaaattagtgatggaaaaaataaaatctctcacaaattcattggtcgcaaaatttaatcacagaatgagatagg 35778178  T
Q  420 gatttcacattttccctctctaa 442  Q
    |||||||  ||||||||| ||||    
T  35778177 gatttcatgttttccctcactaa 35778155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 23423758 - 23423891
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| | |||||||||| | ||| |||||  |||| | |||| ||||||| |||||||||||| || || |||||| |||||||| |||||||||||    
T  23423758 ctactaggataagcaaaattagggagggaaatttgtgacgaaaaacataaaattcctcacaaattccttggttgcaaaatttagtgacggaattagagag 23423857  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||| ||||    
T  23423858 ggatttcatgttttccctcactaaatttcactca 23423891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 36716202 - 36716335
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| ||||||||||||||| |||| ||||||||||||  | |||| |||| ||| |||  ||||||||||     
T  36716202 ctactagaaaaaacaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctatggtcgtaaaatttaatgaaggaattagagaa 36716301  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | |||||| |||||    
T  36716302 ggatttcacgttttccctcacaaaattttcctca 36716335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 36597342 - 36597465
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||| ||||   ||| |||||| ||||||| |||||||||||| || |||| |||| ||||||||||||||||||||    
T  36597342 ctactagaaaaagcaaaatttgggagaaaaatttatgacggaaaacataaaattcctcacaaattccttggtcgtaaaatttagtgacagaattagagag 36597441  T
Q  419 ggatttcacattttccctctctaa 442  Q
    | |||| |  ||||||||| ||||    
T  36597442 gaattttatgttttccctcactaa 36597465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 358 - 452
Target Start/End: Complemental strand, 17079503 - 17079409
Alignment:
Q  358 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||| ||| |||||||  || ||||||||| |||||||| ||||||||||||||||| |  |||||||| |||||||||||||||    
T  17079503 ggaaaaaataaaatcccttacaaatttcttggtcgcaaaatttagtgacggaattagagagggatttgatgttttccctttctaaatttccctca 17079409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 359 - 452
Target Start/End: Original strand, 33816800 - 33816893
Alignment:
Q  359 gaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||| ||| ||||||  ||||||||| ||||||||||||||    
T  33816800 gaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaaaggaatttcatgttttccctcactaaatttccctca 33816893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 327 - 446
Target Start/End: Original strand, 3080706 - 3080825
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| |  || |||||  |||||||||||||||||||  ||||||||||| |||||| ||||| |||||||   |||| |||||||||||||    
T  3080706 aaaagcaaaattaggtagggaaattcgtgatggaaaaaataaaatctctcacaaattctttagtcacaaaacttagtgatgaaatttgagagggatttca 3080805  T
Q  427 cattttccctctctaaattt 446  Q
      ||||||||| ||||||||    
T  3080806 tgttttccctcactaaattt 3080825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 327 - 446
Target Start/End: Original strand, 20187951 - 20188070
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| | ||  ||||| ||||| |||||||||||||| |||||||||||| ||  |||||||| ||| |||||||||||||||| ||||  |    
T  20187951 aaaagcaaaattagcgaaggaaattagtgacggaaaaaataaaattcctcacaaattccttgatcgcaaaatttaatgacagaattagagagtgattcta 20188050  T
Q  427 cattttccctctctaaattt 446  Q
    | ||||| ||| ||||||||    
T  20188051 cgttttctctcactaaattt 20188070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 323 - 446
Target Start/End: Original strand, 24138847 - 24138970
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | |||  ||||  |||| ||||||||| ||||  ||||||||||  || ||||||||| |||||||| ||||||||||| |||    
T  24138847 tagaaaaagcaaaattagcgaggaaaattggtgacggaaaaaatgaaatttctcacaaattgcttggtcgcaaaatttagtgacggaattagagagagat 24138946  T
Q  423 ttcacattttccctctctaaattt 446  Q
    || || ||||||||| ||||||||    
T  24138947 tttacgttttccctcactaaattt 24138970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 40484181 - 40484058
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||| ||| ||||  || | |||||| || ||||||||| |||||||| |||||||||||    
T  40484181 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaataatgaaatttcttataaattccttggtcgcaaaatttagtgacggaattagagag 40484082  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  40484081 ggattttacgttttccctcactaa 40484058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 13974080 - 13974213
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| || || | ||||||| |||| | |||||||||   | ||||  ||| |||||||| |||| ||||||    
T  13974080 ctactagaaaaagcaaaattagcgagggaaattagcgacgaaaaaaatgaaattcttcacaaatttcatggtcgtgaaatttagtgacggaatcagagag 13974179  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  13974180 ggatttcacgttttccctcacaaaatttccctca 13974213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 17771970 - 17772093
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||  | ||| ||||| ||||| ||||||||| |||| ||||| |||||| ||  |||||||| |||||||| |||||||||||    
T  17771970 ctactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaattcctcaaaaattccttgatcgcaaaatttagtgacggaattagagag 17772069  T
Q  419 ggatttcacattttccctctctaa 442  Q
     ||||| |  ||||||||| ||||    
T  17772070 agattttatgttttccctcactaa 17772093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 426
Target Start/End: Original strand, 33734975 - 33735082
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | |||  |||| | ||| |||||||||||||| ||||| |||||| || ||||||||| |||||||| |||||| ||||    
T  33734975 ctactaggaaaagcaaaattagggaggaaaattaatgagggaaaaaataaaatccctcataaattccttggtcgcaaaatttagtgacggaattaaagag 33735074  T
Q  419 ggatttca 426  Q
    || |||||    
T  33735075 gggtttca 33735082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 25673259 - 25673363
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| |||||||||||||  ||| |||||||| || ||||||||| | |||||| |||||||||||||||||||  |||||  || ||||||||    
T  25673259 aaattagtgacggaaaaaataaaactcct-acaaattctttggtcgcaaaattcagtgacggaattagagagggatttcatgttttctgtcactaaattt 25673357  T
Q  447 ccctca 452  Q
    ||||||    
T  25673358 ccctca 25673363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 456
Target Start/End: Original strand, 22649406 - 22649468
Alignment:
Q  394 aaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctcattaa 456  Q
    |||| ||| |||| |||||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  22649406 aaaatttaatgacggaattagagaaggatttcacgttttccctctctaaatttctctcattaa 22649468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 360 - 452
Target Start/End: Complemental strand, 18413652 - 18413560
Alignment:
Q  360 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||  ||||||| ||  ||||||| |||| |||  ||| |||||| | ||||| ||||| ||||||||||||||||||||||||    
T  18413652 aaaaaataaaatcactcacaagtttcttagtcgtaaaatttaacgacggaattaaaaagggaattcacgttttccctctctaaatttccctca 18413560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 342 - 441
Target Start/End: Original strand, 31853112 - 31853212
Alignment:
Q  342 gagagaaatcagtgatggaaaa-aataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctct 440  Q
    ||||||||| |||||| ||||| |||||||| ||||| |||||   | ||||||||| |||||||| ||||||||||| |||||||  |||| |||||||    
T  31853112 gagagaaattagtgatagaaaaaaataaaatccctcataaattttatggtcgcaaaatttagtgacggaattagagagagatttcatgtttttcctctct 31853211  T
Q  441 a 441  Q
    |    
T  31853212 a 31853212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 347 - 423
Target Start/End: Original strand, 23974606 - 23974682
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    |||| ||||| ||||||||||||||  ||||||||||| || |||| |||| ||| ||||  |||||||||||||||    
T  23974606 aaattagtgacggaaaaaataaaatctctcacaaattcctttgtcgtaaaatttaatgacgaaattagagagggatt 23974682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 534
Target Start/End: Original strand, 43442262 - 43442317
Alignment:
Q  479 aggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaaa 534  Q
    |||||||||||||| |  | ||||||||||| | ||||||||||||||||||||||    
T  43442262 aggttcgattctctctgttgtcaatttggatgggctaatttagtttcttcaaaaaa 43442317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 452
Target Start/End: Original strand, 29727928 - 29727981
Alignment:
Q  399 ttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||| |||||||||||| ||||||| ||||||||| | |||||| |||||    
T  29727928 ttagtgacggaattagagaggaatttcacgttttccctcgcaaaatttgcctca 29727981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 6e-36; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 22128314 - 22128447
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||  | ||| ||||| ||||| ||||||||||||||  ||||||||||| || ||||||||| ||||||||||||||||||||    
T  22128314 ctactagaaaaaacaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggtcgcaaaatttagtgacagaattagagag 22128413  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| ||||||||||||||    
T  22128414 ggatttcacgttttccctcactaaatttccctca 22128447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 448
Target Start/End: Complemental strand, 8879018 - 8878889
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||| ||||||||||||||  ||||| ||||| ||||| ||||||||||||||  |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  8879018 ctacaagaaaaagcaaaatcagagagggaaattagtgacggaaaaaataaaatctctcagaaattcgttggtcgcaaaatttagtgacagaattagagag 8878919  T
Q  419 ggatttcacattttccctctctaaatttcc 448  Q
    ||||||||  ||||||||| ||||||||||    
T  8878918 ggatttcatgttttccctcactaaatttcc 8878889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 30268990 - 30269123
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||||||||| ||||||||| |||| |||| ||||||  || ||||||||| |||||||| |||||||||||    
T  30268990 ctactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcgcaaattatttggtcgcaaaatttagtgacggaattagagag 30269089  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||||| |||||||||||| ||||||||||||||    
T  30269090 agattttacattttccctcgctaaatttccctca 30269123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 30283199 - 30283066
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||||||||| ||||||||| |||| |||| ||||||  || ||||||||| |||||||| |||||||||||    
T  30283199 ctactagaaaaagcaaaattagcgagggaaatcagtgacggaaaaaatgaaattcctcgcaaattatttggtcgcaaaatttagtgacggaattagagag 30283100  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||||| |||||||||||| ||||||||||||||    
T  30283099 agattttacattttccctcgctaaatttccctca 30283066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 32175739 - 32175872
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||| ||||| ||||| |||||||||||||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  32175739 ctactagaaaaagcaaaattaacgagggaaattagtgacggaaaaaataaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 32175838  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  32175839 ggattttacgttttccctcactaaatttccctca 32175872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 55309214 - 55309348
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||||| | |||| |||||||||||| || ||||||||| |||||||| ||||||||||    
T  55309214 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagaga 55309313  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    ||||||| || ||||||||| ||||||||||||||    
T  55309314 gggattttacgttttccctcactaaatttccctca 55309348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 448
Target Start/End: Complemental strand, 16915504 - 16915375
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||  | |||  |||| ||||||||||||||||||||  |||||||||| ||| ||||||||| ||||||||| ||||||||||    
T  16915504 ctactagaaaaagcaaaatcagggaggaaaattagtgatggaaaaaataaaatctctcacaaatttgttggtcgcaaaatttagtgacaaaattagagag 16915405  T
Q  419 ggatttcacattttccctctctaaatttcc 448  Q
     ||||||| |||||||||| ||||||||||    
T  16915404 agatttcatattttccctcactaaatttcc 16915375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 27040027 - 27040160
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||||| ||||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  27040027 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaagaaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 27040126  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  27040127 ggatttcacgttttccctcacaaaatttccctca 27040160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 46286231 - 46286364
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||  ||||| ||||| |||||||||||||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  46286231 ctactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaataaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 46286330  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  46286331 ggatttcacgttttccctcacaaaatttccctca 46286364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 319 - 451
Target Start/End: Complemental strand, 19839314 - 19839182
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| |||||||||||    
T  19839314 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19839215  T
Q  419 ggatttcacattttccctctctaaatttccctc 451  Q
    |||||| || ||||||||| |||||||| ||||    
T  19839214 ggattttacgttttccctcactaaattttcctc 19839182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 30508122 - 30507999
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  ||||| |||| | |||||||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  30508122 ctactagaaaaagcaaaattagcgaggaaaatctgtgacgaaaaaaataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 30508023  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| |||||||||||| ||||    
T  30508022 ggattttacattttccctcactaa 30507999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 321 - 452
Target Start/End: Complemental strand, 38223643 - 38223512
Alignment:
Q  321 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 420  Q
    ||||||||| | |||||| | ||| || || ||||| |||||||||||||| ||| |||||||| || ||||||||| ||||||||||||||||||||||    
T  38223643 actagaaaatgtaaaattagggagggagattagtgacggaaaaaataaaattccttacaaattccttggtcgcaaaatttagtgacagaattagagaggg 38223544  T
Q  421 atttcacattttccctctctaaatttccctca 452  Q
    ||||  | ||||||||||||||||||||||||    
T  38223543 attttgcgttttccctctctaaatttccctca 38223512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 9913393 - 9913260
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||  |||||| | |||  |||| ||||| ||||||||| |||| |||||||| ||  || ||||||||| ||||||||||||||||||||    
T  9913393 ctactagaaaaattaaaattagggaggaaaattagtgacggaaaaaattaaatccctcacaattttcttggtcgcaaaatttagtgacagaattagagag 9913294  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||||||||| ||||||||    
T  9913293 ggatttcacgttttccctctctaaaattccctca 9913260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 327 - 452
Target Start/End: Complemental strand, 25147848 - 25147723
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| ||||| |||||   ||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||||||||||    
T  25147848 aaaagcaaaattagagagggaaatttatgacggaaaacataaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagagggatttca 25147749  T
Q  427 cattttccctctctaaatttccctca 452  Q
      ||||||||| ||||||||||||||    
T  25147748 tgttttccctcactaaatttccctca 25147723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 4586760 - 4586887
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| ||  ||| |||| |||||||| |||||||||||    
T  4586760 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgtaaaatttagtgacggaattagagag 4586859  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || ||||||||| ||||||||    
T  4586860 ggattttacgttttccctcactaaattt 4586887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 5473984 - 5473851
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| || |||||| |||| |||||| ||||| || ||||||||| |||||||| |||||| ||||    
T  5473984 ctactagaaaaagcaaaattagcgagggaaattagtgacgggaaaaatgaaattcctcaccaattccttggtcgcaaaatttagtgacggaattaaagag 5473885  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| |||||||| |||||    
T  5473884 ggattttacgttttccctcactaaattttcctca 5473851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 456
Target Start/End: Original strand, 19680426 - 19680563
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||| | ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  19680426 ctactagaaaaagaaaaattagtgagggaatttagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagagag 19680525  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
    |||||| || ||||||||| | ||||||||||||||||    
T  19680526 ggattttacgttttccctcacaaaatttccctcattaa 19680563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 22168403 - 22168270
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||| |||||| || ||||||||| |||||| | |||||||||||    
T  22168403 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcataaattccttggtcgcaaaatttagtgccggaattagagag 22168304  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | ||||||  ||||||||| |||||| |||||||    
T  22168303 gaatttcatgttttccctcactaaatatccctca 22168270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 326 - 442
Target Start/End: Complemental strand, 29625453 - 29625337
Alignment:
Q  326 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 425  Q
    ||||||||||||| | ||| ||||| | ||| ||||||||| |||| ||||||||||||  ||||||||||| |||||||| ||||||||||||||||||    
T  29625453 aaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcacaaattccatagtcgcaaaatttagtgacggaattagagagggatttc 29625354  T
Q  426 acattttccctctctaa 442  Q
    || ||||||||| ||||    
T  29625353 acgttttccctcactaa 29625337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 7111948 - 7112071
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || |||| |||| |||||||| |||||| ||||    
T  7111948 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgaaaaatttagtgacggaattatagag 7112047  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| |||||||||||| ||||    
T  7112048 ggattttacattttccctcactaa 7112071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 9670481 - 9670604
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  9670481 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 9670580  T
Q  419 ggatttcacattttccctctctaa 442  Q
    | |||| || ||||||||| ||||    
T  9670581 gaattttacgttttccctcactaa 9670604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 18715037 - 18714910
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||| ||| | ||| ||||| ||||| |||||||||||||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  18715037 ctactagaaaaagcaatattagcgagggaaataagtgacggaaaaaataaaattcctcacaaattccttggtctcaaaatttagtgacggaattagagag 18714938  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || |||| |||  ||||||||    
T  18714937 ggattttacgtttttccttactaaattt 18714910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 323 - 446
Target Start/End: Complemental strand, 25026688 - 25026565
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    ||||||||| |||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| |||||||||||| |||||||| ||||||||||| |||    
T  25026688 tagaaaaagtaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttagtcgcaaaatttagtgacggaattagagagagat 25026589  T
Q  423 ttcacattttccctctctaaattt 446  Q
    || || ||||||||| ||||||||    
T  25026588 tttacgttttccctcactaaattt 25026565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 38645885 - 38645762
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| || ||||||||    
T  38645885 ctactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggagttagagag 38645786  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  38645785 ggattttacgttttccctcactaa 38645762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 2275679 - 2275813
Alignment:
Q  319 ctactagaaaaagcaaaa-ttcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||||||||| ||||| || | ||| ||||| ||||| ||||||||| |||| |||||||||||| ||  |||||||| |||||||| ||||||||||    
T  2275679 ctactagaaaaaacaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttgatcgcaaaatttagtgacggaattagaga 2275778  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||  ||||||||| |||||| |||||||    
T  2275779 gggatttcatgttttccctcactaaatatccctca 2275813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 322 - 452
Target Start/End: Original strand, 37378628 - 37378758
Alignment:
Q  322 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    ||||||||||||||||| | |||  |||| | ||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| ||||||||||||||    
T  37378628 ctagaaaaagcaaaattagcgaggaaaattattgacggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 37378727  T
Q  422 tttcacattttccctctctaaatttccctca 452  Q
    |||||  ||||||||| | ||||||||||||    
T  37378728 tttcatgttttccctcacaaaatttccctca 37378758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 1638582 - 1638449
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||| ||||||| | ||| ||||| ||||| |||||||||||||| ||||||| |||| || ||||||||| |||||||| ||||||| |||    
T  1638582 ctactaggaaaaacaaaattagggagggaaattagtgacggaaaaaataaaatccctcacatattctttggtcgcaaaatttagtgacggaattagggag 1638483  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | ||||||  ||||||||| |||||||| |||||    
T  1638482 gaatttcatgttttccctcactaaattttcctca 1638449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 5399744 - 5399611
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| ||||||||| || | |||  ||||  |||| |||||| ||||||| |||||||||||| || || |||||| |||||||| |||||||||||    
T  5399744 ctactaggaaaagcaaacttagggaggaaaatttgtgacggaaaacataaaattcctcacaaattccttggttgcaaaatttagtgacggaattagagag 5399645  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  5399644 ggatttcatgttttccctcactaaatttccctca 5399611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 13564917 - 13565050
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||| ||| |||| | |||||||||| || |||  |||| |||||||| |||||||||||    
T  13564917 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaataatgaaattcatcacaaattccttggtcataaaatttagtgacggaattagagag 13565016  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | |||| || ||||||||| ||||||||||||||    
T  13565017 gaattttacgttttccctcactaaatttccctca 13565050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 33914194 - 33914061
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  33914194 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaattttttggtcgcaaaatttagtgacggaattagagag 33914095  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  |||| |||| ||||||||||||||    
T  33914094 ggatttcatgtttttcctcactaaatttccctca 33914061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 323 - 452
Target Start/End: Original strand, 45532585 - 45532714
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    ||||||||||||||||   ||| ||||| ||||| ||||||||| |||| |||||||||||  ||  |||||||| ||| |||| |||||||||||||||    
T  45532585 tagaaaaagcaaaattaacgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttaatgacggaattagagagggat 45532684  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    || || ||||||||| ||||||||||||||    
T  45532685 tttacgttttccctcactaaatttccctca 45532714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 324 - 452
Target Start/End: Complemental strand, 18051969 - 18051841
Alignment:
Q  324 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    ||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||     ||||||||| |||||||| ||||||||||||||||    
T  18051969 agaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaatttcacggtcgcaaaatttagtgacggaattagagagggatt 18051870  T
Q  424 tcacattttccctctctaaatttccctca 452  Q
    |||| ||||||||| | ||||||||||||    
T  18051869 tcacgttttccctcacaaaatttccctca 18051841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 319 - 451
Target Start/End: Complemental strand, 36689812 - 36689680
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||| ||||||| |||||||   ||| ||||| ||||||||||||||| ||||  |||| |||||  || ||||||||| |||||||| |||||||||||    
T  36689812 ctacaagaaaaaacaaaattaacgagggaaattagtgatggaaaaaatgaaatttctcataaattttttggtcgcaaaatttagtgacggaattagagag 36689713  T
Q  419 ggatttcacattttccctctctaaatttccctc 451  Q
    ||||||||| ||||||| | |||||||||||||    
T  36689712 ggatttcacgttttcccacactaaatttccctc 36689680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 13028818 - 13028945
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||| || | |||  |||| ||||| |||||||||  ||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  13028818 ctactagaaaaagcaaacttagcgaggaaaattagtgacggaaaaaatgcaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 13028917  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || ||||||||| ||||||||    
T  13028918 ggattttacgttttccctcactaaattt 13028945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 38619982 - 38619859
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| ||||| |||||| || |||| |||| |||||||| |||||||||||    
T  38619982 ctactagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcataaattctttggtcgtaaaatttagtgacggaattagagag 38619883  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  38619882 ggattttacgttttccctcactaa 38619859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 54539421 - 54539294
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  ||  |||| ||||| ||||||||| |||| |||||||||||| |||||||||||| ||||||||  ||||| ||||    
T  54539421 ctactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacgcaattaaagag 54539322  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
     ||||| || ||||||||| ||||||||    
T  54539321 tgattttacgttttccctcactaaattt 54539294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 24682329 - 24682460
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| | ||| |||||||||||||| ||||||||||||  | ||||||||| ||||||   |||||||||||    
T  24682329 ctactagaaaaagaaaaattagggagggaaattaatgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtggtggaattagagag 24682428  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| |||||||| ||  |||||||||||    
T  24682429 ggatttcacgttttccctttc--aatttccctca 24682460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 319 - 456
Target Start/End: Complemental strand, 44783618 - 44783480
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattag-aga 417  Q
    |||||||||||||||||| | | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| ||| |||| ||||||| |||    
T  44783618 ctactagaaaaagcaaaactagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttaatgacggaattagaaga 44783519  T
Q  418 gggatttcacattttccctctctaaatttccctcattaa 456  Q
    |||||||||  |||||| ||  ||||| |||||||||||    
T  44783518 gggatttcatgttttccttcgataaatatccctcattaa 44783480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 4627080 - 4627207
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| |||||||||||  ||  ||| |||| ||||||||  ||||||||||    
T  4627080 ctactagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctcacaaatttcttgatcgtaaaatttagtgacgaaattagagag 4627179  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
     ||||| |||||||||||| ||||||||    
T  4627180 agattttacattttccctcactaaattt 4627207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 42055532 - 42055409
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| |||||| |||| | ||||||| |||| |||||||||||| || ||||||||| ||||| || ||||||| |||    
T  42055532 ctactagaaaaagcaaaattagcgagggaaatctgtgacgaaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtaacggaattagtgag 42055433  T
Q  419 ggatttcacattttccctctctaa 442  Q
     ||||| ||||||| |||| ||||    
T  42055432 tgattttacatttttcctcactaa 42055409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 9238627 - 9238745
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| ||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  9238627 ctactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 9238726  T
Q  419 ggatttcacattttccctc 437  Q
      |||| || |||||||||    
T  9238727 aaattttacgttttccctc 9238745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 12072093 - 12071964
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| |||||| |||||||| |||| | ||| |||||| ||  |||||||| |||||||| |||||||||||||||    
T  12072093 tagaaaaagcaaaattagcgagcgaaattagtgatcgaaaaaatgaaattcttcataaattccttgatcgcaaaatttagtgacggaattagagagggat 12071994  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    || |  |||||| || |||||| |||||||    
T  12071993 tttatgttttccttcactaaatatccctca 12071964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 9058954 - 9059072
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  ||||  ||||| |||||||  ||||||||||| || ||||||||| ||| |||| |||||||||||    
T  9058954 ctactaggaaaagcaaaattagggagggaaatttgtgactgaaaacataaaatttctcacaaattccttggtcgcaaaatttaatgacggaattagagag 9059053  T
Q  419 ggatttcacattttccctc 437  Q
    ||||||||  |||||||||    
T  9059054 ggatttcatgttttccctc 9059072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 374 - 452
Target Start/End: Original strand, 22156658 - 22156736
Alignment:
Q  374 ctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||| || ||||||||| |||||||| |||||||||||||||||||  ||||||||| |||||| |||||||    
T  22156658 ctcacaaattccttggtcgcaaaatttagtgacggaattagagagggatttcatgttttccctcactaaatatccctca 22156736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 319 - 456
Target Start/End: Complemental strand, 25225232 - 25225097
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||||| ||| |||||| |||||||  ||  ||||||| ||  |||||||| ||| | ||||||||||||||    
T  25225232 ctactagaaaaagaaaaattagggagggaaatcaatgacggaaaatataaaat--ctgtcaaattctttgatcgcaaaatttaataacagaattagagag 25225135  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
    |||||||||  ||||  |||||||||||| ||||||||    
T  25225134 ggatttcacgatttctttctctaaatttctctcattaa 25225097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 389 - 455
Target Start/End: Original strand, 37761914 - 37761980
Alignment:
Q  389 gtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctcatta 455  Q
    ||||||||| |||||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  37761914 gtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcactaaattttcctcatta 37761980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 346 - 442
Target Start/End: Original strand, 9239310 - 9239406
Alignment:
Q  346 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 442  Q
    ||||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| | | |||| |||||||||||||||||||| ||||||||| ||||    
T  9239310 gaaattagtgacggaaaaaatgaaattgctcacaaattccttggtcgcaaaattgaatgacggaattagagagggatttcacgttttccctcactaa 9239406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 324 - 448
Target Start/End: Original strand, 30568006 - 30568130
Alignment:
Q  324 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    ||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| ||||||||||||  | |||| |||| ||| |||| ||||||||||| ||||    
T  30568006 agaaaaaacaaaattagcgagcgaaattagtgacggaaaaaatgaaattcctcacaaattctatggtcgtaaaatttaatgacggaattagagagagatt 30568105  T
Q  424 tcacattttccctctctaaatttcc 448  Q
    | || ||||||||| | ||||||||    
T  30568106 ttacgttttccctcacaaaatttcc 30568130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 347 - 426
Target Start/End: Complemental strand, 313694 - 313615
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||| ||||| |||||||||||||| ||||| |||||| || ||||||||| ||||| ||| ||||||||||||||||||    
T  313694 aaattagtgacggaaaaaataaaatccctcataaattctttggtcgcaaaatttagtaacataattagagagggatttca 313615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 4606831 - 4606954
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| ||||| |||||| | ||| ||||| ||||| ||| ||||||||||   |||||||||  || | ||||||| |||||||| |||||||||||    
T  4606831 ctactaggaaaagtaaaattagggagggaaattagtgacggacaaaataaaatctgtcacaaatttcttggccgcaaaatttagtgacggaattagagag 4606930  T
Q  419 ggatttcacattttccctctctaa 442  Q
     |||||||| ||||||||| ||||    
T  4606931 tgatttcactttttccctcactaa 4606954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 323 - 442
Target Start/End: Complemental strand, 12106113 - 12105995
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    ||||||||| |||||| | ||| ||||| | ||||||||||||||||||  |||| |||||| || ||||| ||| |||||||| ||||||||||||| |    
T  12106113 tagaaaaagtaaaattagcgagggaaattattgatggaaaaaataaaatttctcataaattctttggtcgc-aaatttagtgacggaattagagaggggt 12106015  T
Q  423 ttcacattttccctctctaa 442  Q
    ||||  ||||||||| ||||    
T  12106014 ttcatgttttccctcactaa 12105995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 347 - 442
Target Start/End: Complemental strand, 14944853 - 14944758
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaa 442  Q
    |||| ||||| | ||||||| |||| |||||||||||  || ||||||||| |||||||| ||||||||||||||||| || ||||||||| ||||    
T  14944853 aaattagtgacgtaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagagggattttacgttttccctcactaa 14944758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 18744100 - 18744205
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| ||||||||| ||||  ||||||||||   | |||  |||| |||||||| |||||||||||||||||||| ||||||||| | ||||||    
T  18744100 aaattagtgacggaaaaaatgaaatttctcacaaatttcatggtcataaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 18744199  T
Q  447 ccctca 452  Q
    ||||||    
T  18744200 ccctca 18744205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 360 - 452
Target Start/End: Complemental strand, 3613089 - 3612997
Alignment:
Q  360 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||| | |||||||||||| || ||||||||  ||||||||  ||||||||||| ||||||| |||| |||||||||| ||| ||||    
T  3613089 aaaaaataaattccctcacaaattccttggtcgcaaattttagtgacgaaattagagaggaatttcacgtttttcctctctaaaattctctca 3612997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 347 - 426
Target Start/End: Complemental strand, 6553911 - 6553832
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||| ||||| |||||||||||||| ||||| |||||  || ||||||||| ||||| ||| ||||||||||||||||||    
T  6553911 aaattagtgacggaaaaaataaaatccctcataaatttcttggtcgcaaaatttagtaacataattagagagggatttca 6553832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 448
Target Start/End: Complemental strand, 29238558 - 29238429
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||| ||||| | | ||| ||||| | ||| ||||||||||||||  ||||||||||| || ||  ||||| ||||||||||||||||| ||    
T  29238558 ctactaggaaaaacaaaactagggagggaaattattgacggaaaaaataaaatctctcacaaattctttggtttcaaaatttagtgacagaattagatag 29238459  T
Q  419 ggatttcacattttccctctctaaatttcc 448  Q
     ||||| |  |||| |||| ||||||||||    
T  29238458 agattttatgtttttcctcactaaatttcc 29238429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 360 - 452
Target Start/End: Complemental strand, 39235034 - 39234944
Alignment:
Q  360 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||| |||||||  ||||||||||  || ||||||||| ||||| ||| ||||||||||  ||||||| |||||| |||||||||||||||||    
T  39235034 aaaacataaaatttctcacaaattttttggtcgcaaaatttagtaacaaaattagagag--atttcacgttttccttctctaaatttccctca 39234944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 30420035 - 30420162
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  |||| ||||| |||||||||||||| | | |||||||  || |||| |  | ||||||||  ||||||||||    
T  30420035 ctactagaaaaagcaaaattagggaggaaaattagtgacggaaaaaataaaattcattacaaattacttggtcgaagcatttagtgacgaaattagagag 30420134  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    | ||||||  ||||| | ||||||||||    
T  30420135 gaatttcatgttttctcactctaaattt 30420162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 347 - 446
Target Start/End: Complemental strand, 34557290 - 34557191
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| |||||||||||||| | |||||||||| || ||| ||||| ||| |||| |||||| |||  ||||| || ||||||||| ||||||||    
T  34557290 aaattagtgacggaaaaaataaaatccttcacaaattccttggtcacaaaatttaatgacggaattaaagacagattttaccttttccctcgctaaattt 34557191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 319 - 426
Target Start/End: Complemental strand, 23104484 - 23104376
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    ||||||| |||| ||||||| | || | ||||||| || |||||||| |||||| | ||||||||||  | ||||||||| |||| ||||  ||||||||    
T  23104484 ctactaggaaaaacaaaattagggacaaaaatcagggacggaaaaaaataaaattcatcacaaattctatggtcgcaaaatttagggacatgattagaga 23104385  T
Q  418 gggatttca 426  Q
    |||||||||    
T  23104384 gggatttca 23104376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 6e-36; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 27449221 - 27449088
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  27449221 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 27449122  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  27449121 ggattttacgttttccctcactaaatttccctca 27449088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 319 - 456
Target Start/End: Complemental strand, 29956505 - 29956368
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||||||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||| ||    
T  29956505 ctactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagaaag 29956406  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  29956405 ggatttcacattttccctcacaaaatttccctcattaa 29956368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 319 - 456
Target Start/End: Complemental strand, 30005660 - 30005523
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||||||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||| ||    
T  30005660 ctactagaaaaagtaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagaaag 30005561  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  30005560 ggatttcacattttccctcacaaaatttccctcattaa 30005523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 320 - 452
Target Start/End: Complemental strand, 1628347 - 1628215
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||||||||| |||||| | ||| ||||| | |||||||||||||||||| ||||| |||||| ||||||| |||| ||||||||  |||||||||||    
T  1628347 tactagaaaaagtaaaattagggagggaaattaatgatggaaaaaataaaattcctcataaattccttagtcgtaaaatttagtgacgaaattagagagg 1628248  T
Q  420 gatttcacattttccctctctaaatttccctca 452  Q
    |||||||| ||||||||||||||||||||||||    
T  1628247 gatttcacgttttccctctctaaatttccctca 1628215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 5261070 - 5260937
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  5261070 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 5260971  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||| ||||||||||    
T  5260970 ggattttacgttttccctcactatatttccctca 5260937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 9652711 - 9652578
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   ||||||||||| |||||||| |||||||||||    
T  9652711 ctactagaaaaagcaaaattggcgagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatagtcgcaaaatttagtgacggaattagagag 9652612  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | ||||||||||||    
T  9652611 ggatttcacgttttccctcacaaaatttccctca 9652578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 11085344 - 11085477
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||||||||||||| | ||||||||| |||| ||||| |||||| || ||||||||| |||||||| |||||||||||    
T  11085344 ctactagaaaaagtaaaattagcgagagaaatcagtaacggaaaaaatgaaattcctcataaattctttggtcgcaaaatttagtgacggaattagagag 11085443  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||| |||||||| ||||||||| ||||    
T  11085444 ggatttcacaatttccctcactaaatttctctca 11085477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 320 - 452
Target Start/End: Complemental strand, 28390105 - 28389973
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||||||||| |||||  |||||  |||| ||||| ||||||||||||||  |||||||||||||| ||||||||| |||||||| |||||||||| |    
T  28390105 tactagaaaaagtaaaatcagagaggaaaattagtgacggaaaaaataaaatctctcacaaattcgttggtcgcaaaatttagtgacggaattagagaag 28390006  T
Q  420 gatttcacattttccctctctaaatttccctca 452  Q
    |||||||| ||||||||| ||||||||||||||    
T  28390005 gatttcacgttttccctcactaaatttccctca 28389973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 26098946 - 26098823
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  26098946 ctactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 26098847  T
Q  419 ggatttcacattttccctctctaa 442  Q
    ||||||||  ||||||||| ||||    
T  26098846 ggatttcatgttttccctcactaa 26098823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 48404993 - 48404866
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  48404993 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 48404894  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || ||||||||| ||||||||    
T  48404893 ggattttacgttttccctcactaaattt 48404866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 323 - 452
Target Start/End: Original strand, 19269870 - 19269999
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||| ||||||||    
T  19269870 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattaaagagggat 19269969  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    || || ||||||||| ||||||||||||||    
T  19269970 tttacgttttccctcactaaatttccctca 19269999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 19610471 - 19610338
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  19610471 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19610372  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  19610371 ggatttcatgttttccctcactaaatttccctca 19610338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 27212811 - 27212916
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| |||||| ||||||||||||| |||||||||||| |||||||||||| |||||||| |||||| ||||||||||||| |||| |||||||||||||    
T  27212811 aaattagtgatagaaaaaataaaatccctcacaaattctttagtcgcaaaatttagtgacggaattaaagagggatttcacgtttttcctctctaaattt 27212910  T
Q  447 ccctca 452  Q
    ||||||    
T  27212911 ccctca 27212916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 314 - 446
Target Start/End: Complemental strand, 13921463 - 13921331
Alignment:
Q  314 ttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatta 413  Q
    |||| |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||    
T  13921463 ttacactactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaatta 13921364  T
Q  414 gagagggatttcacattttccctctctaaattt 446  Q
    ||||||||||| || ||||||||| ||||||||    
T  13921363 gagagggattttacgttttccctcactaaattt 13921331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 13905040 - 13905163
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| ||||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  13905040 ctactagaaaaagcaaaattagagagcgaaattagtgacggaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 13905139  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  13905140 ggattttacgttttccctcactaa 13905163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 21490036 - 21490159
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||||| ||| ||||||||| ||||  ||||||||||| || ||||||||| ||||||||||||||||||||    
T  21490036 ctactagaaaaaacaaaattagtgagggaaatcaatgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacagaattagagag 21490135  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| |||||||||||| ||||    
T  21490136 ggattttacattttccctcactaa 21490159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 7623533 - 7623666
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||  | ||| ||||| ||||| ||||||||| ||||  |||||| |||| || ||||||||| |||||||| |||||||||||    
T  7623533 ctactagaaaaagaaaaatcagcgagggaaattagtgacggaaaaaatgaaatttctcacagattctttggtcgcaaaatttagtgacggaattagagag 7623632  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||||||||| | ||||||||||||    
T  7623633 ggatttcacattttccctcacaaaatttccctca 7623666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 8110472 - 8110339
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| ||| |||| |||||||||||    
T  8110472 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcggaaaatttaatgacggaattagagag 8110373  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | |||| || ||||||||| ||||||||||||||    
T  8110372 gaattttacgttttccctcactaaatttccctca 8110339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 11007685 - 11007818
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| | |||||||||  || ||||||||| |||||||| |||||||||||    
T  11007685 ctactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcgtcacaaatttcttggtcgcaaaatttagtgacggaattagagag 11007784  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  11007785 ggattttacgttttccctcactaaatttccctca 11007818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 11915891 - 11915758
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||| || |||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  11915891 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagagag 11915792  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  11915791 ggattttacgttttccctcactaaatttccctca 11915758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 16299994 - 16299861
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  16299994 ctactaggaaaagcaaaattagggagcgaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 16299895  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| | ||||||||||||    
T  16299894 ggatttcatgttttccctcaccaaatttccctca 16299861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 18104532 - 18104665
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| ||||||||||||  | ||||||||| |||||||| |||||||||||    
T  18104532 ctactagaaaaagcaaaattagcgagggaaattattgacggaaaaaattaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagag 18104631  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| | ||||||||||||    
T  18104632 ggatttcatgttttccctcacaaaatttccctca 18104665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 19223582 - 19223449
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| |||||  |||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  19223582 ctactagaaaaagcaaaattagcgagggaaattggtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagag 19223483  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||| | ||||||||||||||    
T  19223482 ggattttacgttttcccccactaaatttccctca 19223449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 25882699 - 25882570
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||||||    
T  25882699 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagagggat 25882600  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    ||||  ||||||||| |||||| |||||||    
T  25882599 ttcatgttttccctcactaaatatccctca 25882570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 26390636 - 26390769
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||||||||| ||||| ||||||||| |||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  26390636 ctactagaaaaagcaaaattagcgagagaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagag 26390735  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  || |||||| | |||| |||||||    
T  26390736 ggatttcatgttatccctcacaaaatatccctca 26390769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 46942620 - 46942487
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||  ||||| |||||  |||||||| |||| |||||||| ||  || ||||||||| ||||||||||||||||||||    
T  46942620 ctactagaaaaatcaaaattagggaaggaaattagtgacagaaaaaattaaatccctcacaattttcttggtcgcaaaatttagtgacagaattagagag 46942521  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||||||||| ||||||||    
T  46942520 ggatttcacgttttccctctctaaaattccctca 46942487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 324 - 452
Target Start/End: Complemental strand, 18539932 - 18539804
Alignment:
Q  324 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    ||||||||||||||| ||||| ||||| ||||| ||||||||| |||| ||||| |||||   | ||||||||| |||||||| ||||||||||||||||    
T  18539932 agaaaaagcaaaattagagagggaaattagtgacggaaaaaatgaaattcctcaaaaatttcatggtcgcaaaatttagtgacggaattagagagggatt 18539833  T
Q  424 tcacattttccctctctaaatttccctca 452  Q
    |||| ||||||||| | ||||||||||||    
T  18539832 tcacgttttccctcacaaaatttccctca 18539804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 5565855 - 5565732
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||  | ||| ||||| ||||| ||||||||||||||  ||||||||||  || ||||||||| ||||||||| ||||||||||    
T  5565855 ctactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaatttcttggtcgcaaaatttagtgacataattagagag 5565756  T
Q  419 ggatttcacattttccctctctaa 442  Q
    ||||||||| ||||||||| ||||    
T  5565755 ggatttcacgttttccctcactaa 5565732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 21816854 - 21816727
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  21816854 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 21816755  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    | |||| || ||||||||| ||||||||    
T  21816754 gaattttacgttttccctcactaaattt 21816727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 43329765 - 43329888
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| ||||||||||     
T  43329765 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagaa 43329864  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| |||||||||||| ||||    
T  43329865 ggattttacattttccctcactaa 43329888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 1310961 - 1311094
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  ||  |||| ||||| ||||||||| |||  |||||||||||| || ||||||||| |||||||| |||||||||||    
T  1310961 ctactagaaaaagcaaaattagcaaggaaaattagtgacggaaaaaatgaaaatcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 1311060  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || |||||| || ||||||||||||||    
T  1311061 ggattttacgttttccatcactaaatttccctca 1311094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 11219271 - 11219138
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| ||||  |||||||||||  ||||||||||| ||| |||| |||||||||||    
T  11219271 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccatagtcgcaaaatttaatgacggaattagagag 11219172  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||| | |||||| |||||    
T  11219171 ggatttcacgttttccctcacaaaattttcctca 11219138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 456
Target Start/End: Original strand, 11837216 - 11837353
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| |||||  |||||||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  11837216 ctactagaaaaaacaaaattagcgagggaaattcgtgatggaaaaaatgaaattcctcacaaattctttggtcgtaaaatttagtgacggaattagagag 11837315  T
Q  419 ggatttcacattttccctctctaaatttccctcattaa 456  Q
    | ||||||  ||||||||| |||| | |||||||||||    
T  11837316 gaatttcatgttttccctcactaagtatccctcattaa 11837353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 347 - 452
Target Start/End: Original strand, 17582331 - 17582436
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| |||||||||||||| ||||||||||||  | ||||||||| |||||||| |||||||||||||||||||| ||||||||| | ||||||    
T  17582331 aaattagtgacggaaaaaataaaattcctcacaaattccatggtcgcaaaatttagtgacggaattagagagggatttcacgttttccctcacaaaattt 17582430  T
Q  447 ccctca 452  Q
    ||||||    
T  17582431 ccctca 17582436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 18091549 - 18091682
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| ||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||  || ||||||||| |||||||| |||||||||||    
T  18091549 ctactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttttggtcgcaaaatttagtgacggaattagagag 18091648  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| |  ||||||||| |||||| |||||||    
T  18091649 ggattttatgttttccctcactaaatatccctca 18091682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 23217210 - 23217343
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| |||||| |||||| | ||| ||||| | ||| ||||||||| |||| ||||||||||||  | ||| ||||| |||||||| |||||||||||    
T  23217210 ctactaaaaaaagaaaaattagggagggaaattaatgagggaaaaaatcaaattcctcacaaattctatggtcccaaaatttagtgacggaattagagag 23217309  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| |||||||||||||||||| |||||    
T  23217310 ggatttcacgttttccctctctaaattttcctca 23217343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 31250221 - 31250088
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||| |||||||| | |||  | || ||||| |||||||||||||| ||| |||||||  || ||||||||| ||||||||||||||||||||    
T  31250221 ctactagaaaatgcaaaattagggaggaagattagtgacggaaaaaataaaattccttacaaatttcttggtcgcaaaatttagtgacagaattagagag 31250122  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||    ||||||||||||||||||||||||    
T  31250121 ggattttgtgttttccctctctaaatttccctca 31250088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 31433870 - 31433737
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| |||||| |||||| || || ||||| |||||| |||||||||||||  ||||||||||| || |||| |||| |||||||| |||||||||||    
T  31433870 ctactaaaaaaagtaaaattagatagggaaattagtgatagaaaaaataaaatttctcacaaattccttggtcgtaaaatttagtgacggaattagagag 31433771  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | ||||||| |||||||| |||||| ||||||||    
T  31433770 gaatttcacgttttccctttctaaaattccctca 31433737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 36543882 - 36543749
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | |||  |||| ||||||||||||||||||||  |||||| |||| || ||||||||| ||||||||  ||||||||||    
T  36543882 ctactagaaaaagaaaaattagggaggaaaattagtgatggaaaaaataaaatctctcacagattctttggtcgcaaaatttagtgacgaaattagagag 36543783  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| | ||||||||||||    
T  36543782 ggatttcatgttttccctcacaaaatttccctca 36543749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 360 - 452
Target Start/End: Original strand, 26830485 - 26830577
Alignment:
Q  360 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||| ||||||||||||  | ||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  26830485 aaaaaataaaattcctcacaaattccatggtcgcaaaattttgtgacggaattagagagggatttcacgttttccctctctaaatttccctca 26830577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 5744549 - 5744426
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | |||  ||||  |||| |||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  5744549 ctactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaatgcctcacaaattccttagtcgcaaaatttagtgacggaattagagag 5744450  T
Q  419 ggatttcacattttccctctctaa 442  Q
     |||||||  ||||||||| ||||    
T  5744449 agatttcatgttttccctcactaa 5744426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 5781508 - 5781385
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | |||  ||||  |||| |||||| |||||||||||||||||||| |||||||||||| |||||||| |||||||||||    
T  5781508 ctactaggaaaagcaaaattagggaggaaaatttgtgacggaaaacataaaatgcctcacaaattccttagtcgcaaaatttagtgacggaattagagag 5781409  T
Q  419 ggatttcacattttccctctctaa 442  Q
     |||||||  ||||||||| ||||    
T  5781408 agatttcatgttttccctcactaa 5781385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 17269606 - 17269729
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||  ||||| |  ||||||||||||||||| |||||||||||| ||  |||||||| |||||||| |||||||||||    
T  17269606 ctactagaaaaagcaaaattagcgatggaaattaacgatggaaaaaataaaattcctcacaaattctttgatcgcaaaatttagtgacggaattagagag 17269705  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||||| ||||| |||| ||||    
T  17269706 ggatttcatatttttcctcactaa 17269729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 10941667 - 10941785
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  10941667 ctactagaaaaagcaaaattagtaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 10941766  T
Q  419 ggatttcacattttccctc 437  Q
    ||||||||  |||||||||    
T  10941767 ggatttcatgttttccctc 10941785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 8428304 - 8428171
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||  |||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || |||| |||| |||||||| |||||||||||    
T  8428304 ctactagaaaaaataaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgtaaaatttagtgacggaattagagag 8428205  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||  ||||||||| |||||| |||||||    
T  8428204 agatttcatgttttccctcactaaatatccctca 8428171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 17762775 - 17762642
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||| | ||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  17762775 ctactagaaagaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagag 17762676  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||  ||||||||| |||||| |||||||    
T  17762675 cgatttcatgttttccctcactaaatatccctca 17762642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 18380157 - 18380024
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||||||||| ||||||||| |||| | |||||||||  ||  ||| |||| |||||||| |||||| ||||    
T  18380157 ctactagaaaaagtaaaattagcgagggaaatcagtgacggaaaaaatgaaattcttcacaaatttcttgatcgtaaaatttagtgacggaattaaagag 18380058  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| ||||||||||||  |||||||||||||    
T  18380057 ggattttacattttccctcattaaatttccctca 18380024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 19064095 - 19063962
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||| | ||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||| ||||| |||||||| |||||||||||    
T  19064095 ctactagaaagaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcacaaaatttagtgacggaattagagag 19063996  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||  ||||||||| |||||| |||||||    
T  19063995 cgatttcatgttttccctcactaaatatccctca 19063962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 347 - 452
Target Start/End: Complemental strand, 19545615 - 19545510
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||||||||| || |||| |||| ||||||||    
T  19545615 aaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagagggattttacgtttttcctcactaaattt 19545516  T
Q  447 ccctca 452  Q
    ||||||    
T  19545515 ccctca 19545510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 448
Target Start/End: Complemental strand, 27969048 - 27968919
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||  | ||| ||||| ||||| |||| |||||||||  ||||||  || ||| ||||||||| ||| ||||||||||||||||    
T  27969048 ctactagaaaaagcaaaatcagggagggaaattagtgacggaacaaataaaatctctcacacctttgttggtcgcaaaatttaatgacagaattagagag 27968949  T
Q  419 ggatttcacattttccctctctaaatttcc 448  Q
    ||||||||  ||||||||| ||||||||||    
T  27968948 ggatttcatgttttccctcactaaatttcc 27968919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 29216125 - 29215992
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| ||||||||||||   |||  ||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  29216125 ctactaggaaaagcaaaattatggaggaaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 29216026  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  29216025 ggatttcatgttttccctcactaaatttccctca 29215992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 30219471 - 30219338
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  30219471 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaattttttggtcgcaaaatttagtgacggaattagagag 30219372  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  |||| |||| ||||||||||||||    
T  30219371 ggatttcatgtttttcctcactaaatttccctca 30219338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 327 - 452
Target Start/End: Complemental strand, 49915576 - 49915451
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    ||||| ||||||  |||| |||||  |||| |||||| ||||||| ||| |||||||  |||||||||||| |||||||| |||||||||||||||||||    
T  49915576 aaaagtaaaattaaagagggaaatttgtgacggaaaacataaaatccctaacaaatttcttagtcgcaaaatttagtgacggaattagagagggatttca 49915477  T
Q  427 cattttccctctctaaatttccctca 452  Q
      ||||||||| ||||||||||||||    
T  49915476 tgttttccctcactaaatttccctca 49915451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 324 - 452
Target Start/End: Original strand, 4393357 - 4393485
Alignment:
Q  324 agaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatt 423  Q
    ||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||     ||||||||| |||||||| ||||||||||||||||    
T  4393357 agaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaatttctcacaaatttcacggtcgcaaaatttagtgacggaattagagagggatt 4393456  T
Q  424 tcacattttccctctctaaatttccctca 452  Q
    |||| ||||||||| | ||||||||||||    
T  4393457 tcacgttttccctcacaaaatttccctca 4393485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 15063994 - 15064117
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  15063994 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 15064093  T
Q  419 ggatttcacattttccctctctaa 442  Q
     |||||||  ||||||||| ||||    
T  15064094 agatttcatgttttccctcactaa 15064117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 23773610 - 23773487
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| |  || ||||| ||||| |||| |||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  23773610 ctactagaaaaaacaaaattagtaagggaaattagtgacggaagaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 23773511  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  23773510 ggattttacgttttccctcactaa 23773487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 323 - 446
Target Start/End: Complemental strand, 29236173 - 29236050
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  |||||||| |  || ||||||||| |||||||| |||||||||||||||    
T  29236173 tagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaaattcttggtcgcaaaatttagtgacggaattagagagggat 29236074  T
Q  423 ttcacattttccctctctaaattt 446  Q
    || || ||||||||| ||||||||    
T  29236073 tttacgttttccctcactaaattt 29236050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 46012730 - 46012853
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||  | |||  |||| ||||| ||||||||||||||  ||||||||||| ||  |||||||| ||||||||| ||||||||||    
T  46012730 ctactagaaaaagcaaaatcagggaggaaaattagtgacggaaaaaataaaatctctcacaaattccttgatcgcaaaatttagtgacaaaattagagag 46012829  T
Q  419 ggatttcacattttccctctctaa 442  Q
    ||||||||  ||||||||| ||||    
T  46012830 ggatttcatgttttccctcactaa 46012853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 15490167 - 15490035
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| ||||||||||||  | |||| |||| ||||| | ||||||||||||  ||||||||||  || ||||||||| ||||||||| ||||| ||||    
T  15490167 ctactaaaaaaagcaaaatcagggagaaaaattagtgacgaaaaaaataaaatctctcacaaattttttggtcgcaaaatttagtgaca-aattaaagag 15490069  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||| ||| ||||||||||||||    
T  15490068 ggatttcacgttttctctcactaaatttccctca 15490035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 21020198 - 21020065
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| ||||| ||||| ||||||||||||||  ||||||||||| || || |||||| |||||||| ||||||||||     
T  21020198 ctactaggaaaagcaaaattagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggttgcaaaatttagtgacggaattagagaa 21020099  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| |  ||||||||| ||||| | ||||||    
T  21020098 ggattttatgttttccctcactaaactgccctca 21020065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 36564441 - 36564574
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | |||  |||| |||||||||||||||||||| ||| ||| |||| || |||||| || ||||||||  ||||||||||    
T  36564441 ctactagaaaaagaaaaattagggaggaaaattagtgatggaaaaaataaaatccctgacagattctttggtcgcagaatttagtgacgaaattagagag 36564540  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||   |||||||| | ||||||||||||    
T  36564541 ggatttcatgctttccctcacaaaatttccctca 36564574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 1745490 - 1745612
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| ||||||||||||| | ||| ||||| ||||| ||||||| | |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  1745490 ctactaaaaaaagcaaaattagcgagggaaattagtgacggaaaaa-tgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 1745588  T
Q  419 ggatttcacattttccctctctaa 442  Q
     ||||| || ||||||||| ||||    
T  1745589 agattttacgttttccctcactaa 1745612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 3461312 - 3461435
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||  ||||| |||||  ||||||||||||| |||||||||||  ||  |||||||| ||| |||| |||||||||||    
T  3461312 ctactagaaaaagcaaaattagcgaaggaaattagtgacagaaaaaataaaattcctcacaaatttcttgatcgcaaaatttaatgacggaattagagag 3461411  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  3461412 ggattttacgttttccctcactaa 3461435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 358 - 452
Target Start/End: Original strand, 20615384 - 20615478
Alignment:
Q  358 ggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||||  ||||||||||  || |||| |||| ||| ||||||||||||||||| ||||||| |||||| |||||||||||||||||    
T  20615384 ggaaaaaataaaatatctcacaaattttttggtcgtaaaatttaatgacagaattagagaggaatttcacgttttccttctctaaatttccctca 20615478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 326 - 452
Target Start/End: Original strand, 29704041 - 29704167
Alignment:
Q  326 aaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttc 425  Q
    ||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||   |  |||||||| |||||||| |||||| |||||||||||    
T  29704041 aaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattttatgatcgcaaaatttagtgacggaattaaagagggatttc 29704140  T
Q  426 acattttccctctctaaatttccctca 452  Q
    || ||||| ||| | ||||||||||||    
T  29704141 acgttttctctcacaaaatttccctca 29704167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 432
Target Start/End: Complemental strand, 8546378 - 8546265
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||| ||||||||||||||| | |||  |||| ||||| ||||||||| |||| ||||||||||||  |  |||||||| |||||||| |||||||||||    
T  8546378 ctaccagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccatgatcgcaaaatttagtgacggaattagagag 8546279  T
Q  419 ggatttcacatttt 432  Q
    ||||||||| ||||    
T  8546278 ggatttcacgtttt 8546265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 319 - 412
Target Start/End: Original strand, 20761952 - 20762045
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaatt 412  Q
    |||||||||||||||||||  | ||| ||||| ||||| ||||||||||||||  ||||||||||| || ||||||||| ||||||||||||||    
T  20761952 ctactagaaaaagcaaaatcagggagggaaattagtgacggaaaaaataaaatctctcacaaattccttggtcgcaaaatttagtgacagaatt 20762045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 347 - 446
Target Start/End: Complemental strand, 28859696 - 28859597
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||| ||||| ||||||||| |||| |||||||||||| || || |||||| |||||||| ||||||||||||||||| || |||| |||| ||||||||    
T  28859696 aaattagtgacggaaaaaatgaaattcctcacaaattccttggttgcaaaatttagtgacggaattagagagggattttacgttttacctcactaaattt 28859597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 327 - 442
Target Start/End: Original strand, 50665646 - 50665761
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| ||||| |||||   ||| |||||| ||||||| |||||||||||| ||  |||||||| ||||||||  ||||||||||||||||||    
T  50665646 aaaagcaaaattagagagggaaatttatgacggaaaacataaaattcctcacaaattctttgatcgcaaaatttagtgacgaaattagagagggatttca 50665745  T
Q  427 cattttccctctctaa 442  Q
      ||||||||| ||||    
T  50665746 tgttttccctcactaa 50665761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 323 - 452
Target Start/End: Complemental strand, 8543597 - 8543469
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    |||||||| ||||||| | ||| ||||| ||||||||||||| | |||| ||| |||| ||   | ||||||||| ||| |||| |||||||||||||||    
T  8543597 tagaaaaaacaaaattagcgagggaaattagtgatggaaaaa-tgaaattcctaacaagtttcatggtcgcaaaatttaatgacggaattagagagggat 8543499  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    ||||| ||||||||| | ||||||||||||    
T  8543498 ttcacgttttccctcacaaaatttccctca 8543469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 319 - 451
Target Start/End: Complemental strand, 10803854 - 10803721
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||||||||||| ||||| | ||| ||||| | ||| |||||||| | |||| |||||||||||  || ||||||||| ||| |||| |||||| |||    
T  10803854 ctactagaaaaagccaaattagggagggaaattaatgacggaaaaaaatgaaattcctcacaaatttcttggtcgcaaaatttaatgacggaattaaaga 10803755  T
Q  418 gggatttcacattttccctctctaaatttccctc 451  Q
    || |||| || ||||||||| |||||||||||||    
T  10803754 ggaattttacgttttccctcactaaatttccctc 10803721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 319 - 415
Target Start/End: Original strand, 6447248 - 6447344
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattaga 415  Q
    ||||||| |||||||||||| | ||| ||||| |||||||||||||||||||| |||| || |||| || ||| ||||  |||||||||||||||||    
T  6447248 ctactaggaaaagcaaaattagggagggaaattagtgatggaaaaaataaaattcctcgcagattctttggtctcaaagtttagtgacagaattaga 6447344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 327 - 446
Target Start/End: Complemental strand, 21088875 - 21088758
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    ||||||||| || | ||| ||||| ||||| ||||||||||||||  ||||||||||| || ||||||||| ||  |||| ||||| |||||||||||||    
T  21088875 aaaagcaaagttagggagggaaattagtgacggaaaaaataaaat--ctcacaaattccttggtcgcaaaatttgatgacggaattcgagagggatttca 21088778  T
Q  427 cattttccctctctaaattt 446  Q
      ||||||||| ||||||||    
T  21088777 tgttttccctcactaaattt 21088758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 327 - 426
Target Start/End: Complemental strand, 37283648 - 37283549
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| || |||  |||| |||||||| |||||||||||||||||||    
T  37283648 aaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattccttggtcataaaatttagtgacggaattagagagggatttca 37283549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 47263267 - 47263394
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||||||||||   ||  |||||  ||||  |||||||| |||| |||||||||||| || ||||||||| ||||||||||| ||||| ||    
T  47263267 ctactagaaaaagcaaaattaacgaaggaaattggtgacagaaaaaattaaattcctcacaaattccttggtcgcaaaatttagtgacagagttagatag 47263366  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
      |||| || ||||||||| ||||||||    
T  47263367 aaattttacgttttccctcactaaattt 47263394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 347 - 437
Target Start/End: Complemental strand, 6718815 - 6718725
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctc 437  Q
    |||| ||||| ||||||||| |||| |||||||||||   | ||||||||| |||||||| |||||||| ||||||||||| |||||||||    
T  6718815 aaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcgcaaaatttagtgacggaattagaaagggatttcacgttttccctc 6718725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 10772055 - 10772183
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaa-taaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    ||||||||||||| ||||||   ||| ||||| |||||  ||||||| |  ||| | |||||||||  |||||||||||| ||| ||||  |||||||||    
T  10772055 ctactagaaaaagtaaaattaacgagggaaattagtgacagaaaaaaatggaattcttcacaaattttttagtcgcaaaatttaatgacgaaattagaga 10772154  T
Q  418 gggatttcacattttccctctctaaattt 446  Q
    ||||||||| |||||||||| ||||||||    
T  10772155 gggatttcatattttccctcactaaattt 10772183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 319 - 442
Target Start/End: Original strand, 6088230 - 6088353
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||  |  || ||||| ||||| ||||||||| |||| ||||| |||||| || ||| ||||| ||| | || ||||||||||     
T  6088230 ctactagaaaaagcaaaataagtaagggaaattagtgacggaaaaaatgaaattcctcagaaattccttggtcacaaaatttaataacggaattagagat 6088329  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| || ||||||||| ||||    
T  6088330 ggattttacgttttccctcactaa 6088353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 456
Target Start/End: Original strand, 26963326 - 26963388
Alignment:
Q  394 aaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctcattaa 456  Q
    |||| ||||| || |||||||||||| |||| |||||||||||| ||||||||||||||||||    
T  26963326 aaaatttagtaacggaattagagaggaattttacattttccctcactaaatttccctcattaa 26963388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 346 - 447
Target Start/End: Complemental strand, 29451200 - 29451099
Alignment:
Q  346 gaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatt 445  Q
    ||||| ||||| ||||||||| ||||  |||| |||||| | ||| |||||| || | ||| ||||||||||||||||| || ||||||||| |||||||    
T  29451200 gaaattagtgacggaaaaaatgaaatttctcataaattcctcagttgcaaaattttgggacggaattagagagggattttacgttttccctcactaaatt 29451101  T
Q  446 tc 447  Q
    ||    
T  29451100 tc 29451099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 27182660 - 27182791
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||| ||||||| | ||| ||||| |||||   |||||||||||| |||||||||| | || ||| ||| | ||||||||  ||||||||||    
T  27182660 ctactaggaaaaacaaaattagggagggaaattagtgac--aaaaaataaaatccctcacaaatcccttggtcacaagatttagtgacgaaattagagag 27182757  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     ||||||   ||||||||| ||||||||| ||||    
T  27182758 agatttcttgttttccctcactaaatttctctca 27182791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 360 - 452
Target Start/End: Complemental strand, 20088492 - 20088400
Alignment:
Q  360 aaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||  |||| |||||| || ||| ||||| |||||||  |||||||||| ||||||||  |||| |||| ||||||||| ||||    
T  20088492 aaaaaataaaatttctcataaattctttggtcacaaaatttagtgatggaattagagaaggatttcatgttttgcctcactaaatttctctca 20088400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 520
Target Start/End: Original strand, 29186517 - 29186556
Alignment:
Q  481 gttcgattctctttagtatcaatttggatagactaattta 520  Q
    ||||||||||||||||| ||||||||||| ||||||||||    
T  29186517 gttcgattctctttagtgtcaatttggatggactaattta 29186556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 446
Target Start/End: Original strand, 35579607 - 35579654
Alignment:
Q  399 ttagtgacagaattagagagggatttcacattttccctctctaaattt 446  Q
    |||||||| ||||||||||||||||| || ||||||||| ||||||||    
T  35579607 ttagtgacggaattagagagggattttacgttttccctcactaaattt 35579654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 426
Target Start/End: Complemental strand, 50240851 - 50240772
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||| ||||| ||||||||||||||  |||| |||||| || | ||||||| ||||| ||| |||||||||| |||||||    
T  50240851 aaattagtgacggaaaaaataaaatctctcataaattccttggacgcaaaatttagtaacataattagagagagatttca 50240772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 534
Target Start/End: Complemental strand, 52769993 - 52769938
Alignment:
Q  479 aggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaaa 534  Q
    ||||||||||||||||||| ||||||| | | | ||||||||| ||||||||||||    
T  52769993 aggttcgattctctttagtgtcaatttaggtgggctaatttagcttcttcaaaaaa 52769938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 323 - 440
Target Start/End: Complemental strand, 13615544 - 13615427
Alignment:
Q  323 tagaaaaagcaaaattcg-agagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    |||||||||||||||| | | ||| |||| ||||| |||| ||||||||  |||||||||||  |||  ||||||| |||||||   ||||||||||| |    
T  13615544 tagaaaaagcaaaattaggaaagaaaaat-agtgacggaagaaataaaacccctcacaaatttcttaaccgcaaaatttagtgatgaaattagagaggaa 13615446  T
Q  422 tttcacattttccctctct 440  Q
    |||||| |||||| |||||    
T  13615445 tttcacgttttccttctct 13615427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 7973620 - 7973677
Alignment:
Q  477 ttaggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaaa 534  Q
    |||||||||||||||| |  | ||||||||| | ||||||||||| ||||||||||||    
T  7973620 ttaggttcgattctctctgatgtcaatttgggtggactaatttagcttcttcaaaaaa 7973677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 479 - 532
Target Start/End: Original strand, 26988215 - 26988268
Alignment:
Q  479 aggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaa 532  Q
    ||||||||||||||| |||||||||||||||   ||||||||  ||||||||||    
T  26988215 aggttcgattctcttcagtatcaatttggatgagctaatttaacttcttcaaaa 26988268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 341 - 418
Target Start/End: Original strand, 27711192 - 27711269
Alignment:
Q  341 agagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| ||| ||||| |||||||||||| | ||| ||||| |  || ||||||||| |||||||| |||||||||||    
T  27711192 agagaggaattagtgaaggaaaaaataaattcccttacaaactttttggtcgcaaaatttagtgacggaattagagag 27711269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 74; Significance: 1e-33; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 9231 - 9364
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| ||||||||||     
T  9231 ctactagaaaaagcaaaattagtgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagaa 9330  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  9331 ggattttacgttttccctcactaaatttccctca 9364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 74; Significance: 1e-33; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 3879 - 3746
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | |||  |||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  3879 ctactagaaaaagcaaaattagcgaggaaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 3780  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  3779 ggattttacgttttccctcactaaatttccctca 3746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 202911 - 202778
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| |||||||||||    
T  202911 ctactagaaaaagaaaaattagcgagggaaattagtgacggaaaaaatgaaattgctcacaaattccttggtcgcaaaatttagtgacggaattagagag 202812  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | |||| || ||||||||| |||||||| |||||    
T  202811 gaattttacgttttccctcactaaattttcctca 202778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 452
Target Start/End: Original strand, 276207 - 276269
Alignment:
Q  390 tcgcaaaagttagtgacagaattagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||| |||||||| |||||||||||||||||||| ||||| ||| | ||||||||||||    
T  276207 tcgcaaaatttagtgacggaattagagagggatttcacgttttctctcacaaaatttccctca 276269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 274667 - 274732
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattc 384  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| | ||||||||||    
T  274667 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcttcacaaattc 274732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 319 - 446
Target Start/End: Complemental strand, 22348 - 22221
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| | ||||||| |||| |||||||||||| |||||||||||| |||||||| |||||||||||    
T  22348 ctactagaaaaagcaaaattagcgagggaaattagtgacgaaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagag 22249  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || ||||||||| ||||||||    
T  22248 ggattttacgttttccctcactaaattt 22221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 5981 - 6114
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||    
T  5981 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagag 6080  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  6081 ggattttacgttttccctcactaaatttccctca 6114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 19740 - 19607
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  19740 ctactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgacggaattagagag 19641  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| |||||| |||||||    
T  19640 ggatttcatgttttccctcactaaatatccctca 19607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 70; Significance: 3e-31; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 26620 - 26487
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||  ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||| |||||||| |||||||||||    
T  26620 ctactagaaaaagcaaaattagtgacggaaattagtgacggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttagtgacggaattagagag 26521  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| |||||| |||||||    
T  26520 ggattttacgttttccctcactaaatgtccctca 26487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 70; Significance: 3e-31; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 120989 - 121122
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||| |||||| |||||| ||||| ||||| ||| ||| ||||||||||||  ||||||||||  || ||||||||| |||||||| |||||||||||    
T  120989 ctactaaaaaaagtaaaattagagagggaaattagttatgaaaaaaataaaatttctcacaaatttcttggtcgcaaaatttagtgacggaattagagag 121088  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||| ||||||||||||||| ||||||||    
T  121089 ggatttcacgttttccctctctaaaattccctca 121122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 321 - 442
Target Start/End: Original strand, 84678 - 84799
Alignment:
Q  321 actagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggg 420  Q
    |||||||||||||||||| | ||| ||||| |||||  |||||||| |||| |||||||||||| || ||||||||| |||||||  |||||||||||||    
T  84678 actagaaaaagcaaaattagtgagggaaattagtgacagaaaaaatgaaattcctcacaaattccttggtcgcaaaatttagtgatggaattagagaggg 84777  T
Q  421 atttcacattttccctctctaa 442  Q
    |||| || ||||||||| ||||    
T  84778 attttacgttttccctcactaa 84799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 320 - 456
Target Start/End: Complemental strand, 7592 - 7456
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||||||||| ||||||   |||  |||| ||||| ||||||||| |||| | ||||||| || |||||||||||  |||||||||||||||||||||    
T  7592 tactagaaaaagtaaaattaacgaggaaaattagtgacggaaaaaatgaaattcttcacaaaatccttagtcgcaaagtttagtgacagaattagagagg 7493  T
Q  420 gatttcacattttccctctctaaatttccctcattaa 456  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  7492 gatttcacgttttccctcactaaatttccctcattaa 7456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 322 - 446
Target Start/End: Original strand, 10668 - 10792
Alignment:
Q  322 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    ||||||||||||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| |||||||||||| |||||||| |||||||||||| |    
T  10668 ctagaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttagtcgcaaaatttagtgacggaattagagaggaa 10767  T
Q  422 tttcacattttccctctctaaattt 446  Q
    ||| || ||||||||| ||||||||    
T  10768 ttttacgttttccctcactaaattt 10792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 66; Significance: 8e-29; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 7642 - 7509
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||| |||||| || |||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  7642 ctactagaaaaagcaaaattagcgagggaaattagtgacggaaaatatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagagag 7543  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    |||||| || ||||||||| ||||||||||||||    
T  7542 ggattttacgttttccctcactaaatttccctca 7509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 66; Significance: 8e-29; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 84440 - 84307
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| |  || ||||| ||||| ||||||||| |||| |||||||||||   | ||| ||||| |||||||| |||||||||||    
T  84440 ctactagaaaaagcaaaattagcaagggaaattagtgacggaaaaaatgaaattcctcacaaatttcatggtcacaaaatttagtgacggaattagagag 84341  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||||||||||||| | ||||||||||||    
T  84340 ggatttcacattttccctcacaaaatttccctca 84307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 322 - 452
Target Start/End: Original strand, 8115 - 8245
Alignment:
Q  322 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    ||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| ||| |||||||| || ||||||||| |||||||| ||||||||||||||    
T  8115 ctagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctaacaaattccttggtcgcaaaatttagtgacggaattagagaggga 8214  T
Q  422 tttcacattttccctctctaaatttccctca 452  Q
    |||||  ||||||||| |||||| |||||||    
T  8215 tttcatgttttccctcactaaatatccctca 8245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 322 - 452
Target Start/End: Original strand, 21847 - 21977
Alignment:
Q  322 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    ||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| ||| |||||||| || ||||||||| |||||||| ||||||||||||||    
T  21847 ctagaaaaagcaaaattagcgagggaaattaatgacggaaaaaatgaaattcctaacaaattccttggtcgcaaaatttagtgacggaattagagaggga 21946  T
Q  422 tttcacattttccctctctaaatttccctca 452  Q
    |||||  ||||||||| |||||| |||||||    
T  21947 tttcatgttttccctcactaaatatccctca 21977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 920 - 1054
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaa-aataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagaga 417  Q
    |||||||||||||||||||| | ||| ||||| | ||| |||||| |||||||| ||||| |||||| || ||||||||| |||||||| ||||||||||    
T  920 ctactagaaaaagcaaaattagcgagggaaattactgacggaaaaaaataaaattcctcataaattccttggtcgcaaaatttagtgacggaattagaga 1019  T
Q  418 gggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||  ||||||||| |||||| |||||||    
T  1020 gggatttcatgttttccctcactaaatatccctca 1054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 63; Significance: 5e-27; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 322 - 452
Target Start/End: Complemental strand, 10292 - 10162
Alignment:
Q  322 ctagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagaggga 421  Q
    |||| |||||||||||| | ||| |||||  |||| |||||| ||||||| |||||||||||| ||| |||||||| |||||||| ||||||||||||||    
T  10292 ctaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcacaaattctttaatcgcaaaatttagtgacggaattagagaggga 10193  T
Q  422 tttcacattttccctctctaaatttccctca 452  Q
    |||||  |||||||||  |||||||||||||    
T  10192 tttcatgttttccctcagtaaatttccctca 10162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 62; Significance: 2e-26; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 58719 - 58586
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||| |||||||||||| | ||| |||||  |||| |||||| ||||||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  58719 ctactaggaaaagcaaaattagggagggaaatttgtgacggaaaacataaaattcctcaaaaatttcttggtcgcaaaatttagtgacggaattagagag 58620  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| ||||||||||||||    
T  58619 ggatttcatgttttccctcactaaatttccctca 58586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 61; Significance: 8e-26; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 312 - 452
Target Start/End: Original strand, 74536 - 74676
Alignment:
Q  312 tcttacgctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaat 411  Q
    |||||| ||||||| ||||| |||||| | ||| |||||  |||| |||||| ||||||| ||||| |||||  || ||||||||| |||||||| ||||    
T  74536 tcttacactactaggaaaagtaaaattagggagggaaatttgtgacggaaaacataaaattcctcataaatttcttggtcgcaaaatttagtgacggaat 74635  T
Q  412 tagagagggatttcacattttccctctctaaatttccctca 452  Q
    |||||||||||||||  ||||||||| ||||||||||||||    
T  74636 tagagagggatttcatgttttccctcactaaatttccctca 74676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 446
Target Start/End: Original strand, 14992 - 15119
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| |||||  |||||||| |||| ||||| |||||  || ||||||||| |||||||| |||||||||||    
T  14992 ctactagaaaaagcaaaattagcgagggaaattagtgaccgaaaaaatgaaattcctcataaatttcttggtcgcaaaatttagtgacggaattagagag 15091  T
Q  419 ggatttcacattttccctctctaaattt 446  Q
    |||||| || ||||||||| ||||||||    
T  15092 ggattttacgttttccctcactaaattt 15119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 60; Significance: 3e-25; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 182667 - 182544
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||| ||||||||| ||||  ||||||||||| || ||||||||| |||||||| |||||||||||    
T  182667 ctactagaaaaagtaaaattagcgagggaaattagtgacggaaaaaatgaaatttctcacaaattccttggtcgcaaaatttagtgacggaattagagag 182568  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| ||| |||||||| ||||    
T  182567 ggattttacaatttccctcactaa 182544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 444
Target Start/End: Complemental strand, 219773 - 219648
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||  ||||| ||||| ||||||||| |||| |||||||||||  ||| |||||||| ||||| || |||||||||||    
T  219773 ctactagaaaaagcaaaattagcgacggaaattagtgacggaaaaaatgaaattcctcacaaattttttaatcgcaaaatttagtaacggaattagagag 219674  T
Q  419 ggatttcacattttccctctctaaat 444  Q
    ||||||||  ||||||||| ||||||    
T  219673 ggatttcatgttttccctcactaaat 219648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 319 - 396
Target Start/End: Original strand, 215665 - 215742
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaa 396  Q
    |||||| ||||||||||||| | ||||||||| || || ||||||||| |||| |||||||||||| || ||||||||    
T  215665 ctactaaaaaaagcaaaattagcgagagaaattagcgacggaaaaaatgaaattcctcacaaattccttggtcgcaaa 215742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 12789 - 12657
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||| |||||||||||||| | ||| ||||| ||||| ||||||||| |||| ||||| ||||||  | ||||||||| |||||||| |||||||||||    
T  12789 ctacttgaaaaagcaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcataaattctatggtcgcaaaatttagtgacggaattagagag 12690  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||| ||||| ||||||||| | ||||||||||||    
T  12689 gga-ttcacgttttccctcacaaaatttccctca 12657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 37789 - 37922
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||| ||||||| |   | ||||| ||||| |||||||||||||| |||||||||||   | ||||||||| |||||||| |||||||||||    
T  37789 ctactagaaaaaacaaaattagcaggggaaattagtgacggaaaaaataaaattcctcacaaattttatggtcgcaaaatttagtgacggaattagagag 37888  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    ||||||||  ||||||||| | ||||||||||||    
T  37889 ggatttcatgttttccctcacaaaatttccctca 37922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Complemental strand, 44054 - 43921
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| | ||| ||||| ||||||||||||||| |||| |||||||||||| || ||||||||| ||| | || ||||||||||     
T  44054 ctactagaaaaagaaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcacaaattctttggtcgcaaaatttaataacggaattagagaa 43955  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
    | |||| || ||||||||| |||||||| |||||    
T  43954 gaattttacgttttccctcactaaattttcctca 43921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 58; Significance: 5e-24; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 319 - 452
Target Start/End: Original strand, 39705 - 39838
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    |||||||||||||||||||| | ||| ||||| ||||||||||||||| |||| |||| ||||||   | || |||||| |||||||| |||||||||||    
T  39705 ctactagaaaaagcaaaattagcgagggaaattagtgatggaaaaaatgaaattcctcccaaatttcatggttgcaaaatttagtgacggaattagagag 39804  T
Q  419 ggatttcacattttccctctctaaatttccctca 452  Q
     |||||||| |||||||||   ||||||||||||    
T  39805 agatttcacgttttccctcataaaatttccctca 39838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0655 (Bit Score: 55; Significance: 3e-22; HSPs: 1)
Name: scaffold0655
Description:

Target: scaffold0655; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 323 - 452
Target Start/End: Original strand, 3168 - 3295
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggat 422  Q
    ||||||||| |||||| | ||| ||||| ||||| |||||| ||||| | |||||||||||   | ||||||||| |||||||||||||||| |||||||    
T  3168 tagaaaaagaaaaattagggagggaaattagtgacggaaaagataaagttcctcacaaatttcatggtcgcaaaatttagtgacagaattagtgagggat 3267  T
Q  423 ttcacattttccctctctaaatttccctca 452  Q
    ||||| ||||||  ||||||||||||||||    
T  3268 ttcacgttttcc--ctctaaatttccctca 3295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 5e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 319 - 442
Target Start/End: Complemental strand, 440100 - 439977
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagag 418  Q
    ||||||||||||| |||||| |  ||  | || ||||| ||||||||| |||| |||||||||||  ||  |||||||| |||||||| |||||||||||    
T  440100 ctactagaaaaagtaaaattagcaaggaatattagtgacggaaaaaatgaaattcctcacaaatttcttgatcgcaaaatttagtgacggaattagagag 440001  T
Q  419 ggatttcacattttccctctctaa 442  Q
    |||||| |||||||||||| ||||    
T  440000 ggattttacattttccctcactaa 439977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 320 - 450
Target Start/End: Complemental strand, 6931 - 6801
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    ||||||||||||||||||| | ||| ||||| | ||| ||||||||| |||| | || ||||||  || || |||||| ||| |||| ||||||||||||    
T  6931 tactagaaaaagcaaaattagcgagggaaattattgacggaaaaaatgaaattcttcgcaaatttcttcgttgcaaaatttaatgacggaattagagagg 6832  T
Q  420 gatttcacattttccctctctaaatttccct 450  Q
     ||||||  ||||||||| ||||||||||||    
T  6831 aatttcatgttttccctcactaaatttccct 6801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 320 - 426
Target Start/End: Original strand, 74720 - 74826
Alignment:
Q  320 tactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagg 419  Q
    |||||||||| |||||||| |  || ||||| ||||| ||||||||| ||||  |||||||||||  | |||| |||| |||||||||||||||||||||    
T  74720 tactagaaaaggcaaaattagcaagggaaattagtgacggaaaaaatgaaatttctcacaaattctctggtcgtaaaatttagtgacagaattagagagg 74819  T
Q  420 gatttca 426  Q
    |||||||    
T  74820 gatttca 74826  T

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Target: scaffold0502 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 327 - 452
Target Start/End: Complemental strand, 11021 - 10896
Alignment:
Q  327 aaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||||||||||| | ||  |||||  |||| | |||| ||||||| |||||||||||| || ||| ||||| ||||||||||||||||||||| ||||||    
T  11021 aaaagcaaaattagggaaggaaatttgtgacgaaaaatataaaattcctcacaaattccttggtcacaaaatttagtgacagaattagagaggaatttca 10922  T
Q  427 cattttccctctctaaatttccctca 452  Q
      |||| ||||  |||||||||||||    
T  10921 tgtttttcctcagtaaatttccctca 10896  T

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Target: scaffold0284 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 347 - 426
Target Start/End: Original strand, 1549 - 1628
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||| ||||| |||||||||||||| ||||| |||||| || ||||||||| ||||| ||| |||||||||||| |||||    
T  1549 aaattagtgacggaaaaaataaaatccctcataaattccttggtcgcaaaatttagtaacataattagagaggggtttca 1628  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 405
Target Start/End: Original strand, 17619 - 17705
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtga 405  Q
    |||||||||||| ||||||| | ||| ||||| ||||| ||||||||| |||| |||||||||||| || ||||||||  |||||||    
T  17619 ctactagaaaaaacaaaattagcgagggaaattagtgacggaaaaaatgaaattcctcacaaattccttggtcgcaaactttagtga 17705  T

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Target: scaffold0019 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 173578 - 173456
Alignment:
Q  323 tagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaa--ttcgttagtcgcaaaagttagtgacagaattagagaggg 420  Q
    |||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  |||| |||  ||| || ||||||||| |||||||| ||||||||||| |    
T  173578 tagaaaaagcaaaattagcgag-gaaattagtgacggaaaaaatgaaatttctcataaaaattctttggtcgcaaaatttagtgacggaattagagagtg 173480  T
Q  421 atttcacattttccctctctaaat 444  Q
    |||| |  ||||||||| ||||||    
T  173479 attttatgttttccctcactaaat 173456  T

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Target: scaffold0554 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 9947 - 9882
Alignment:
Q  319 ctactagaaaaagcaaaattcgagagagaaatcagtgatggaaaaaataaaatgcctcacaaattc 384  Q
    |||||||||||||||||||| | ||| ||||| ||||| ||||||||| ||||  |||||||||||    
T  9947 ctactagaaaaagcaaaattagcgagtgaaattagtgaaggaaaaaatgaaatttctcacaaattc 9882  T

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Target: scaffold0300 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 477 - 534
Target Start/End: Original strand, 4404 - 4461
Alignment:
Q  477 ttaggttcgattctctttagtatcaatttggatagactaatttagtttcttcaaaaaa 534  Q
    ||||||||||||| || |||| ||||||||| | ||||||||||| ||||||||||||    
T  4404 ttaggttcgattccctctagtgtcaatttgggtggactaatttagcttcttcaaaaaa 4461  T

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Target: scaffold0114 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 347 - 426
Target Start/End: Complemental strand, 36411 - 36332
Alignment:
Q  347 aaatcagtgatggaaaaaataaaatgcctcacaaattcgttagtcgcaaaagttagtgacagaattagagagggatttca 426  Q
    |||| ||||| |||||||||||||| | ||| |||||| || ||| ||||| ||||| ||| |||||||||| |||||||    
T  36411 aaattagtgacggaaaaaataaaatccatcataaattccttggtcacaaaatttagtaacataattagagagagatttca 36332  T

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