View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4452_high_11 (Length: 311)
Name: NF4452_high_11
Description: NF4452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4452_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 13 - 294
Target Start/End: Original strand, 37600061 - 37600342
Alignment:
| Q |
13 |
aatataggcacaatttatagnnnnnnngttcctgccttagtgtgtggcacaagtgtccattgcaccaaacgattcaggttaaaagcgaaaaaagagcttt |
112 |
Q |
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| T |
37600061 |
aatataggcacaatttatagtttttttgttcctgccttagtgtgtggcacaagtgtccattgcaccaaacgattcaggttaaaagcgaaaaaagagcttt |
37600160 |
T |
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| Q |
113 |
tggtggagtatgtgagtgattttggcgatgcattcttgacaagagttcttattttataataattattcttggcttaactactaaagaaagtcagttgctt |
212 |
Q |
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| T |
37600161 |
tagtggagtatgtgagtgattttggcgatgcattcttgacaagagttcttattttataataattattcttggcttaactactaaagaaagtcagttgctt |
37600260 |
T |
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| Q |
213 |
gattccataacaaaattctatattacaaactacaataccaagcaatgcttcctacatcaaactaggatattactattaacaa |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37600261 |
gattccataacaaaattctatattacaaactacaataccaagcaatgcttcctacatcaaactaggatattactattaacaa |
37600342 |
T |
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