View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4452_high_5 (Length: 501)

Name: NF4452_high_5
Description: NF4452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4452_high_5
NF4452_high_5
[»] chr7 (50 HSPs)
chr7 (94-483)||(29762853-29763242)
chr7 (110-209)||(30813819-30813918)
chr7 (149-207)||(5409771-5409829)
chr7 (149-208)||(598269-598328)
chr7 (149-208)||(21864869-21864928)
chr7 (149-208)||(43027403-43027462)
chr7 (149-207)||(15680870-15680928)
chr7 (149-207)||(21880213-21880271)
chr7 (157-202)||(43250073-43250118)
chr7 (153-208)||(1433524-1433579)
chr7 (149-212)||(7438778-7438841)
chr7 (149-207)||(9778566-9778624)
chr7 (153-207)||(17852065-17852119)
chr7 (149-207)||(24339714-24339772)
chr7 (149-202)||(13770757-13770810)
chr7 (93-149)||(25481892-25481948)
chr7 (96-200)||(18215144-18215252)
chr7 (94-149)||(24339633-24339688)
chr7 (149-207)||(32093954-32094013)
chr7 (107-149)||(8234150-8234192)
chr7 (155-209)||(14729770-14729824)
chr7 (158-207)||(6490786-6490835)
chr7 (77-149)||(9408347-9408420)
chr7 (149-206)||(11665370-11665427)
chr7 (53-149)||(24105629-24105724)
chr7 (153-206)||(32287404-32287457)
chr7 (416-469)||(34506091-34506144)
chr7 (96-136)||(35861957-35861997)
chr7 (110-149)||(26033474-26033513)
chr7 (164-207)||(35862027-35862070)
chr7 (149-207)||(2334321-2334379)
chr7 (107-149)||(3991328-3991370)
chr7 (158-208)||(10230023-10230073)
chr7 (94-136)||(11665466-11665508)
chr7 (107-149)||(11831436-11831478)
chr7 (149-203)||(27229244-27229298)
chr7 (158-208)||(28155624-28155674)
chr7 (100-149)||(32094033-32094083)
chr7 (153-203)||(40287306-40287356)
chr7 (149-206)||(20545185-20545242)
chr7 (149-202)||(27732189-27732242)
chr7 (174-207)||(27945104-27945137)
chr7 (110-143)||(42720909-42720942)
chr7 (94-135)||(43027496-43027537)
chr7 (161-205)||(9408265-9408309)
chr7 (108-148)||(13300415-13300455)
chr7 (111-143)||(16341504-16341536)
chr7 (173-209)||(29812596-29812632)
chr7 (153-205)||(29998974-29999026)
chr7 (157-209)||(40131937-40131989)
[»] chr4 (57 HSPs)
chr4 (1-136)||(32273552-32273687)
chr4 (149-207)||(23292926-23292984)
chr4 (114-207)||(3064868-3064961)
chr4 (149-206)||(3947702-3947759)
chr4 (111-205)||(22440559-22440651)
chr4 (149-207)||(715545-715603)
chr4 (149-207)||(752871-752929)
chr4 (149-207)||(24613630-24613688)
chr4 (149-207)||(35161097-35161155)
chr4 (153-207)||(42640589-42640643)
chr4 (158-207)||(18513175-18513224)
chr4 (149-206)||(30982808-30982865)
chr4 (153-204)||(28084589-28084640)
chr4 (157-207)||(2625959-2626009)
chr4 (149-207)||(19482740-19482798)
chr4 (149-207)||(22234819-22234877)
chr4 (149-207)||(29205529-29205587)
chr4 (152-202)||(30838285-30838335)
chr4 (149-207)||(35157925-35157983)
chr4 (149-207)||(36635391-36635449)
chr4 (77-149)||(11596365-11596438)
chr4 (94-143)||(35158004-35158053)
chr4 (94-143)||(36635315-36635364)
chr4 (93-149)||(23292999-23293055)
chr4 (107-143)||(54580042-54580078)
chr4 (149-208)||(12895213-12895272)
chr4 (93-136)||(12895300-12895343)
chr4 (94-149)||(19482659-19482714)
chr4 (152-203)||(20743210-20743261)
chr4 (152-207)||(24343577-24343632)
chr4 (110-149)||(28964261-28964300)
chr4 (110-149)||(29205451-29205490)
chr4 (95-142)||(50280873-50280920)
chr4 (157-211)||(941314-941368)
chr4 (173-207)||(5775304-5775338)
chr4 (111-149)||(6485624-6485662)
chr4 (171-209)||(12708225-12708263)
chr4 (162-208)||(12895054-12895100)
chr4 (149-207)||(15724483-15724541)
chr4 (149-207)||(16073455-16073513)
chr4 (149-207)||(28964188-28964246)
chr4 (149-207)||(34306744-34306802)
chr4 (149-207)||(49431087-49431145)
chr4 (161-207)||(53381530-53381576)
chr4 (149-205)||(4157210-4157266)
chr4 (149-205)||(4157497-4157553)
chr4 (173-206)||(4383451-4383484)
chr4 (149-206)||(14465006-14465063)
chr4 (149-209)||(1148370-1148430)
chr4 (111-143)||(5775377-5775409)
chr4 (159-207)||(11596297-11596345)
chr4 (159-207)||(11931362-11931410)
chr4 (88-136)||(12895142-12895190)
chr4 (158-206)||(17425348-17425396)
chr4 (159-207)||(17876237-17876285)
chr4 (158-206)||(40965341-40965389)
chr4 (151-207)||(47264060-47264116)
[»] chr8 (54 HSPs)
chr8 (262-483)||(11064995-11065216)
chr8 (53-149)||(25566787-25566887)
chr8 (149-209)||(14134760-14134820)
chr8 (94-209)||(36450692-36450822)
chr8 (157-205)||(44067596-44067644)
chr8 (149-208)||(6065585-6065644)
chr8 (149-203)||(5813653-5813707)
chr8 (149-207)||(18407780-18407838)
chr8 (149-209)||(22652048-22652108)
chr8 (149-207)||(8343388-8343446)
chr8 (149-211)||(21465484-21465546)
chr8 (149-207)||(29510233-29510291)
chr8 (149-214)||(3951469-3951534)
chr8 (94-143)||(15816148-15816197)
chr8 (149-206)||(29447040-29447097)
chr8 (149-209)||(15816056-15816116)
chr8 (159-206)||(3658224-3658271)
chr8 (79-149)||(30271304-30271375)
chr8 (153-207)||(22197671-22197725)
chr8 (149-195)||(22943301-22943347)
chr8 (95-149)||(30077400-30077454)
chr8 (108-149)||(4948657-4948698)
chr8 (96-149)||(22197755-22197808)
chr8 (149-214)||(29447516-29447581)
chr8 (151-207)||(11803333-11803389)
chr8 (159-207)||(13397622-13397670)
chr8 (110-149)||(2572069-2572108)
chr8 (110-149)||(8342979-8343018)
chr8 (110-149)||(8343323-8343362)
chr8 (159-206)||(24205749-24205796)
chr8 (153-204)||(24727684-24727735)
chr8 (173-208)||(31514939-31514974)
chr8 (149-204)||(40332252-40332307)
chr8 (149-208)||(41831874-41831933)
chr8 (161-207)||(4673354-4673400)
chr8 (149-207)||(12570438-12570496)
chr8 (149-207)||(12570664-12570722)
chr8 (94-136)||(13436990-13437032)
chr8 (111-149)||(20873077-20873115)
chr8 (94-136)||(22651967-22652009)
chr8 (149-211)||(28745570-28745632)
chr8 (149-207)||(31557057-31557115)
chr8 (149-207)||(34450961-34451019)
chr8 (152-210)||(39820493-39820550)
chr8 (152-205)||(926730-926783)
chr8 (158-207)||(8343037-8343086)
chr8 (162-207)||(17751730-17751775)
chr8 (162-207)||(17760717-17760762)
chr8 (111-147)||(949279-949315)
chr8 (149-205)||(3025612-3025668)
chr8 (149-209)||(4122176-4122236)
chr8 (159-207)||(13403177-13403225)
chr8 (95-131)||(24196628-24196664)
chr8 (111-143)||(41831959-41831991)
[»] chr3 (64 HSPs)
chr3 (94-207)||(11610512-11610628)
chr3 (80-149)||(28812492-28812561)
chr3 (157-205)||(24204983-24205031)
chr3 (149-209)||(55401136-55401196)
chr3 (149-208)||(27505312-27505371)
chr3 (83-149)||(34910297-34910363)
chr3 (149-205)||(4987222-4987278)
chr3 (149-207)||(20503526-20503584)
chr3 (153-207)||(34185052-34185106)
chr3 (149-207)||(40993275-40993333)
chr3 (149-207)||(41961579-41961637)
chr3 (94-143)||(10954943-10954992)
chr3 (149-206)||(15999951-16000008)
chr3 (157-205)||(25775576-25775624)
chr3 (149-200)||(3631745-3631796)
chr3 (94-149)||(4987304-4987359)
chr3 (94-149)||(8587034-8587089)
chr3 (144-203)||(11666011-11666070)
chr3 (90-149)||(14209100-14209159)
chr3 (156-207)||(40052380-40052431)
chr3 (98-149)||(55401070-55401121)
chr3 (157-207)||(3163971-3164021)
chr3 (110-207)||(5407199-5407299)
chr3 (149-207)||(11252037-11252095)
chr3 (52-149)||(14747510-14747608)
chr3 (158-206)||(1389908-1389956)
chr3 (111-143)||(4201404-4201436)
chr3 (173-209)||(4990910-4990946)
chr3 (149-208)||(10955013-10955075)
chr3 (149-209)||(15796221-15796281)
chr3 (149-205)||(28918064-28918120)
chr3 (110-149)||(1509546-1509585)
chr3 (149-207)||(5440967-5441026)
chr3 (94-149)||(10268499-10268554)
chr3 (94-149)||(20503456-20503511)
chr3 (110-149)||(26508117-26508156)
chr3 (110-149)||(28918008-28918047)
chr3 (173-207)||(8842414-8842448)
chr3 (159-201)||(12704597-12704639)
chr3 (97-143)||(14979175-14979221)
chr3 (94-148)||(21479109-21479163)
chr3 (77-149)||(25775481-25775555)
chr3 (149-207)||(28812587-28812645)
chr3 (94-136)||(40052323-40052365)
chr3 (149-207)||(49651716-49651774)
chr3 (94-143)||(2620072-2620121)
chr3 (110-143)||(3164044-3164077)
chr3 (158-207)||(4466540-4466589)
chr3 (110-143)||(7928457-7928490)
chr3 (173-206)||(8789489-8789522)
chr3 (94-143)||(10335305-10335354)
chr3 (149-206)||(14216964-14217021)
chr3 (149-206)||(14223093-14223150)
chr3 (94-143)||(16000035-16000084)
chr3 (110-143)||(25948906-25948939)
chr3 (157-194)||(26665205-26665242)
chr3 (110-147)||(38731225-38731262)
chr3 (110-143)||(51206372-51206405)
chr3 (158-202)||(1509637-1509681)
chr3 (163-207)||(13807229-13807273)
chr3 (93-149)||(15796307-15796363)
chr3 (153-209)||(17276792-17276848)
chr3 (151-207)||(18427012-18427068)
chr3 (88-136)||(24633751-24633799)
[»] chr1 (64 HSPs)
chr1 (107-207)||(46940748-46940849)
chr1 (149-212)||(40917821-40917884)
chr1 (149-207)||(9828116-9828174)
chr1 (149-207)||(18471356-18471414)
chr1 (78-143)||(9828019-9828084)
chr1 (76-207)||(37598804-37598950)
chr1 (149-206)||(40258874-40258931)
chr1 (94-209)||(48450548-48450655)
chr1 (149-205)||(1486646-1486702)
chr1 (149-205)||(16297223-16297279)
chr1 (68-149)||(22881629-22881716)
chr1 (149-207)||(6427536-6427594)
chr1 (158-207)||(29144320-29144369)
chr1 (94-149)||(113290-113345)
chr1 (158-205)||(25452108-25452155)
chr1 (158-205)||(42359391-42359438)
chr1 (157-207)||(2218297-2218347)
chr1 (149-207)||(5898206-5898264)
chr1 (149-211)||(18337390-18337452)
chr1 (52-149)||(21378528-21378624)
chr1 (149-207)||(22515827-22515885)
chr1 (107-149)||(24577199-24577241)
chr1 (168-206)||(28663677-28663715)
chr1 (149-207)||(46348323-46348381)
chr1 (149-207)||(47989569-47989627)
chr1 (110-216)||(35702533-35702640)
chr1 (71-136)||(43492520-43492585)
chr1 (175-208)||(48547937-48547970)
chr1 (158-206)||(10233326-10233374)
chr1 (153-209)||(15323233-15323289)
chr1 (163-207)||(31694639-31694683)
chr1 (159-207)||(42004882-42004929)
chr1 (157-209)||(48040412-48040464)
chr1 (164-207)||(7918154-7918197)
chr1 (152-207)||(18556385-18556440)
chr1 (110-149)||(22515900-22515939)
chr1 (164-207)||(22947806-22947849)
chr1 (149-208)||(32461392-32461451)
chr1 (94-149)||(32461476-32461531)
chr1 (94-149)||(46348396-46348451)
chr1 (53-100)||(48040536-48040583)
chr1 (149-207)||(1815318-1815376)
chr1 (149-207)||(5944355-5944413)
chr1 (173-207)||(21365992-21366026)
chr1 (159-209)||(22794016-22794066)
chr1 (153-207)||(34712323-34712377)
chr1 (149-207)||(38078601-38078659)
chr1 (111-149)||(40258946-40258984)
chr1 (110-143)||(398784-398817)
chr1 (110-143)||(1486728-1486761)
chr1 (173-206)||(10572535-10572568)
chr1 (154-207)||(16164244-16164297)
chr1 (152-205)||(17778617-17778670)
chr1 (112-149)||(18337338-18337375)
chr1 (164-209)||(27965938-27965983)
chr1 (158-207)||(52903316-52903365)
chr1 (95-143)||(12443479-12443527)
chr1 (165-201)||(13011172-13011208)
chr1 (110-149)||(13011228-13011268)
chr1 (111-143)||(15323171-15323203)
chr1 (163-207)||(22881567-22881611)
chr1 (107-143)||(30359392-30359428)
chr1 (173-209)||(36878551-36878587)
chr1 (94-149)||(40917742-40917795)
[»] scaffold0086 (1 HSPs)
scaffold0086 (149-208)||(3000-3059)
[»] chr6 (57 HSPs)
chr6 (94-149)||(10770687-10770742)
chr6 (93-207)||(34595124-34595253)
chr6 (94-141)||(853880-853927)
chr6 (94-209)||(7938107-7938221)
chr6 (144-206)||(9658935-9658998)
chr6 (110-206)||(31959166-31959268)
chr6 (149-207)||(4878004-4878061)
chr6 (149-207)||(8365448-8365506)
chr6 (149-207)||(8776908-8776966)
chr6 (149-207)||(17327590-17327648)
chr6 (149-207)||(28152159-28152217)
chr6 (149-207)||(28715356-28715414)
chr6 (155-200)||(7930368-7930413)
chr6 (149-206)||(31384991-31385048)
chr6 (94-149)||(8776986-8777041)
chr6 (55-149)||(12696277-12696370)
chr6 (94-149)||(16766688-16766743)
chr6 (149-208)||(16766769-16766828)
chr6 (94-149)||(16833299-16833354)
chr6 (94-149)||(17841602-17841657)
chr6 (149-207)||(3209460-3209518)
chr6 (68-149)||(7801169-7801251)
chr6 (149-207)||(10339054-10339112)
chr6 (149-207)||(24645542-24645600)
chr6 (107-149)||(31384924-31384966)
chr6 (96-149)||(1681751-1681804)
chr6 (110-143)||(7151419-7151452)
chr6 (172-209)||(7723197-7723234)
chr6 (149-206)||(17841530-17841587)
chr6 (158-206)||(1700406-1700454)
chr6 (158-206)||(26553816-26553864)
chr6 (94-149)||(426527-426582)
chr6 (94-149)||(7977843-7977898)
chr6 (94-149)||(8365532-8365587)
chr6 (157-204)||(9025448-9025495)
chr6 (144-207)||(16833364-16833427)
chr6 (53-149)||(28715241-28715341)
chr6 (149-204)||(32978842-32978897)
chr6 (111-149)||(4118346-4118384)
chr6 (111-149)||(5970121-5970159)
chr6 (149-207)||(7248430-7248488)
chr6 (157-207)||(7625185-7625235)
chr6 (158-204)||(8389411-8389457)
chr6 (93-143)||(33001308-33001358)
chr6 (149-207)||(34073278-34073335)
chr6 (164-205)||(5569825-5569866)
chr6 (173-210)||(5732471-5732508)
chr6 (94-143)||(7265612-7265661)
chr6 (158-207)||(9107299-9107348)
chr6 (96-149)||(9107383-9107436)
chr6 (110-143)||(10842539-10842572)
chr6 (110-143)||(24138433-24138466)
chr6 (149-178)||(25038029-25038058)
chr6 (111-143)||(403883-403915)
chr6 (149-205)||(5000557-5000613)
chr6 (94-134)||(21424830-21424870)
chr6 (107-143)||(34225828-34225864)
[»] scaffold0450 (1 HSPs)
scaffold0450 (149-207)||(8564-8622)
[»] scaffold0003 (2 HSPs)
scaffold0003 (149-207)||(241666-241724)
scaffold0003 (94-143)||(241585-241634)
[»] chr5 (47 HSPs)
chr5 (149-207)||(27932296-27932354)
chr5 (98-208)||(21576684-21576809)
chr5 (149-207)||(30098398-30098456)
chr5 (149-207)||(42893421-42893479)
chr5 (157-210)||(2436980-2437033)
chr5 (114-207)||(6326253-6326345)
chr5 (154-207)||(14873588-14873641)
chr5 (149-205)||(21190998-21191054)
chr5 (151-207)||(32766872-32766928)
chr5 (149-205)||(43001866-43001922)
chr5 (94-149)||(6247613-6247668)
chr5 (94-149)||(14674260-14674315)
chr5 (94-149)||(33178016-33178071)
chr5 (149-204)||(39268541-39268596)
chr5 (68-149)||(8419991-8420073)
chr5 (173-207)||(24906252-24906286)
chr5 (149-203)||(30183621-30183675)
chr5 (149-207)||(31084389-31084447)
chr5 (149-207)||(39698613-39698671)
chr5 (149-207)||(43564942-43565000)
chr5 (94-143)||(19552562-19552611)
chr5 (155-199)||(17088358-17088402)
chr5 (159-207)||(19820328-19820376)
chr5 (149-209)||(21522822-21522882)
chr5 (149-209)||(21533388-21533448)
chr5 (155-207)||(35017110-35017162)
chr5 (149-208)||(7677777-7677836)
chr5 (110-149)||(21191069-21191108)
chr5 (149-208)||(21194062-21194121)
chr5 (94-149)||(24906314-24906369)
chr5 (94-149)||(31084314-31084369)
chr5 (110-149)||(39698548-39698587)
chr5 (157-216)||(41558579-41558638)
chr5 (173-207)||(10298635-10298669)
chr5 (149-195)||(15382546-15382592)
chr5 (149-207)||(16304366-16304424)
chr5 (173-207)||(17123132-17123166)
chr5 (155-209)||(17593661-17593715)
chr5 (173-207)||(22423764-22423798)
chr5 (149-203)||(36642696-36642749)
chr5 (94-136)||(41995462-41995504)
chr5 (171-204)||(18586232-18586265)
chr5 (149-206)||(21542102-21542159)
chr5 (107-136)||(40131625-40131654)
chr5 (111-143)||(13287418-13287450)
chr5 (149-205)||(23015926-23015982)
chr5 (159-207)||(38464313-38464361)
[»] chr2 (39 HSPs)
chr2 (149-207)||(26769583-26769641)
chr2 (149-205)||(2438661-2438717)
chr2 (149-209)||(35056940-35057000)
chr2 (94-207)||(18840953-18841081)
chr2 (157-207)||(37419823-37419873)
chr2 (153-207)||(37559042-37559096)
chr2 (149-207)||(38117099-38117157)
chr2 (149-206)||(28596530-28596587)
chr2 (149-206)||(44860392-44860449)
chr2 (149-209)||(42511320-42511380)
chr2 (157-207)||(34006930-34006980)
chr2 (149-207)||(34993922-34993980)
chr2 (158-207)||(10535685-10535734)
chr2 (96-149)||(15657857-15657910)
chr2 (93-149)||(19536410-19536467)
chr2 (51-149)||(21374712-21374811)
chr2 (97-149)||(30335411-30335463)
chr2 (149-209)||(30717457-30717517)
chr2 (149-206)||(35449568-35449627)
chr2 (110-149)||(30717543-30717582)
chr2 (149-207)||(11223793-11223850)
chr2 (107-149)||(12940948-12940990)
chr2 (149-207)||(15972934-15972992)
chr2 (53-149)||(20539687-20539783)
chr2 (149-207)||(24009356-24009414)
chr2 (153-207)||(28412422-28412476)
chr2 (111-149)||(30404863-30404901)
chr2 (149-207)||(34784911-34784969)
chr2 (94-143)||(12668442-12668491)
chr2 (154-195)||(14996171-14996212)
chr2 (152-205)||(15657939-15657992)
chr2 (158-207)||(15909570-15909619)
chr2 (150-207)||(21782744-21782801)
chr2 (110-143)||(28677916-28677949)
chr2 (152-208)||(12601140-12601196)
chr2 (149-209)||(19580223-19580283)
chr2 (149-205)||(19942326-19942382)
chr2 (149-209)||(27084330-27084390)
chr2 (149-205)||(36756275-36756331)
[»] scaffold0007 (1 HSPs)
scaffold0007 (157-205)||(225199-225247)
[»] scaffold0361 (1 HSPs)
scaffold0361 (95-207)||(14522-14646)
[»] scaffold0793 (1 HSPs)
scaffold0793 (149-207)||(4821-4879)
[»] scaffold0652 (1 HSPs)
scaffold0652 (149-211)||(398-460)
[»] scaffold0053 (1 HSPs)
scaffold0053 (149-214)||(8859-8924)
[»] scaffold0004 (1 HSPs)
scaffold0004 (149-206)||(92883-92940)
[»] scaffold0223 (1 HSPs)
scaffold0223 (93-149)||(20162-20218)
[»] scaffold0050 (1 HSPs)
scaffold0050 (149-209)||(70339-70399)
[»] scaffold0103 (1 HSPs)
scaffold0103 (94-149)||(51802-51857)
[»] scaffold0380 (1 HSPs)
scaffold0380 (149-207)||(8662-8720)
[»] scaffold0019 (1 HSPs)
scaffold0019 (149-207)||(71797-71855)
[»] scaffold0011 (1 HSPs)
scaffold0011 (107-149)||(17762-17804)
[»] scaffold0227 (1 HSPs)
scaffold0227 (95-143)||(7330-7378)
[»] scaffold0027 (2 HSPs)
scaffold0027 (93-149)||(46672-46728)
scaffold0027 (173-207)||(46742-46776)
[»] scaffold0018 (1 HSPs)
scaffold0018 (94-149)||(178831-178887)
[»] scaffold0008 (1 HSPs)
scaffold0008 (149-205)||(263303-263359)
[»] scaffold0306 (2 HSPs)
scaffold0306 (94-141)||(13391-13438)
scaffold0306 (149-205)||(13467-13523)
[»] scaffold0152 (2 HSPs)
scaffold0152 (94-141)||(21889-21936)
scaffold0152 (149-205)||(21804-21860)
[»] scaffold0009 (1 HSPs)
scaffold0009 (161-200)||(188473-188512)
[»] scaffold0475 (1 HSPs)
scaffold0475 (173-207)||(3393-3427)
[»] scaffold0136 (1 HSPs)
scaffold0136 (149-207)||(3778-3836)
[»] scaffold0066 (1 HSPs)
scaffold0066 (95-149)||(33376-33430)
[»] scaffold0022 (1 HSPs)
scaffold0022 (149-207)||(90904-90962)
[»] scaffold0021 (1 HSPs)
scaffold0021 (149-207)||(2978-3036)
[»] scaffold0020 (1 HSPs)
scaffold0020 (157-207)||(135263-135313)
[»] scaffold0512 (1 HSPs)
scaffold0512 (149-209)||(4974-5034)
[»] scaffold0122 (1 HSPs)
scaffold0122 (95-135)||(8002-8042)


Alignment Details
Target: chr7 (Bit Score: 362; Significance: 0; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 94 - 483
Target Start/End: Complemental strand, 29763242 - 29762853
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtg 193  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  29763242 tgacacaccaacacaacttataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacatcaggacacgcctaatccgaggagtg 29763143  T
Q  194 tccgtgcttcatagctcagaagtcacataatgaacacttgctaaccaaaaagagtagaaattaatgagatacctgagaagcaaggagaacagcatctcta 293  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763142 tccgtgcttcatagctcagaagtcacgtaatgaacacttgctaaccaaaaagagtagaaattaatgagatacctgagaagcaaggagaacagcatctcta 29763043  T
Q  294 tccaaatagagagtaaagtgactagtaagactaaaactaccagtgagccattttcctgctggaacatacagctgagaaccaccttgagaaccatactgac 393  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29763042 tccaaatagagagtaaagtgactagtaagactaaaactaccagtgagccattttcctgctggaacatacagctgagaaccaccttgagaaccatactgac 29762943  T
Q  394 tcaggtgactaattgcagactgaaaagcctttgtattagatgtatttccatctccaacaccaccaaaatctgtcaatgaagcactatgtg 483  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29762942 tcaggtgactaattgcagactgaaaagcctttgtattagatgtatttccatctccaacaccaccaaaatctgtcaatgaagcactatgtg 29762853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 30813819 - 30813918
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||| ||||| |||||||| |||||| |||||   |   ||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  30813819 ctaataatttgagaaaattacataattcagtgtaattacaggtgttgcgtgtccgacatcagaacacgcctaatccgaggagtgtccgtgcttcatagct 30813918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 5409829 - 5409771
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  5409829 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 598269 - 598328
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||||||||||||||||||| | ||||||||||| |||| |||||||||||||||||||    
T  598269 acacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagc 598328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 21864869 - 21864928
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||| ||||||||||||    
T  21864869 acacgacacgtgtccgacaccgggacacgtctaattcgaggagtgtctgtgcttcatagc 21864928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 43027462 - 43027403
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||    
T  43027462 acacgacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcatagc 43027403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 15680870 - 15680928
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||||||||||   ||||| |||||||||||||||||||||||||||||    
T  15680870 acacgacacgtgtccgacaccgagacacgtctaattcgaggagtgtccgtgcttcatag 15680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 21880213 - 21880271
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||||| ||||||||||| |||| ||||||||||||||||||    
T  21880213 acacgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 202
Target Start/End: Original strand, 43250073 - 43250118
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgctt 202  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  43250073 cgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 1433524 - 1433579
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    |||| |||||||||||||| ||||| ||||| ||||||||||||||||||||||||    
T  1433524 gacatgtgtccgacaccaggacacgtctaatccgaggagtgtccgtgcttcatagc 1433579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 7438778 - 7438841
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcag 212  Q
    ||||||||| ||| |||||| || ||||||||||||| ||||||||||||||||||||| ||||    
T  7438778 acacgacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcataggtcag 7438841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 9778566 - 9778624
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| |||||||||||||||| | ||||||||||| | |||||||||||||||||||||    
T  9778566 acacaacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 17852065 - 17852119
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||||||   |||| ||||||||||||||||||||||||||||||    
T  17852065 gacacgtgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcatag 17852119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 24339714 - 24339772
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| ||||||||| | ||||||||||| ||||||||| |||||||||||||    
T  24339714 acacgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcatag 24339772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 13770757 - 13770810
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgctt 202  Q
    |||| |||||||||||||||| ||||||||||||| ||| ||||||||||||||    
T  13770757 acacaacacgtgtccgacaccggaacacgcctaatccgaagagtgtccgtgctt 13770810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 25481892 - 25481948
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  25481892 atgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 25481948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 200
Target Start/End: Complemental strand, 18215252 - 18215144
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttacacacgac----acgtgtccgacaccagaacacgcctaattcgaggag 191  Q
    ||||||| || || ||||||||||||||||||||||||||  ||||||||||||   | |     ||||||||||||| | |||||||||||  ||||||    
T  18215252 acacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtccgacaccgggacacgcctaatctgaggag 18215153  T
Q  192 tgtccgtgc 200  Q
    |||||||||    
T  18215152 tgtccgtgc 18215144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 24339633 - 24339688
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  24339633 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 24339688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 32094013 - 32093954
Alignment:
Q  149 acacgacacgtgtccgacaccaga-acacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||| |  ||||||||||| |||||||||| ||||||||||||    
T  32094013 acacgacacgtgtccgacaccggggacacgcctaatccgaggagtgttcgtgcttcatag 32093954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 8234150 - 8234192
Alignment:
Q  107 caactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  8234150 caactaataatttgaaaaaataacataattcagtgtagttaca 8234192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 155 - 209
Target Start/End: Original strand, 14729770 - 14729824
Alignment:
Q  155 cacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||||||| | |||||| |||| |||||||||||||| ||||||||||    
T  14729770 cacgtgtccgacaccgggacacgcttaatccgaggagtgtccgtacttcatagct 14729824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 6490786 - 6490835
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||| | |||||| |||| |||||||||||||||||||||||    
T  6490786 gtgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatag 6490835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 9408420 - 9408347
Alignment:
Q  77 gacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||| |||||| |||| |||||| || || ||| |||||||||||||||||||||||||| |||||| |||||    
T  9408420 gacacggacaccagacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattaca 9408347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 11665427 - 11665370
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||||||||||||||||||||  |||||  ||||| |||||| |||||||||||||||    
T  11665427 acacgacacgtgtccgacaccgaaacacatctaatacgaggaatgtccgtgcttcata 11665370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 24105629 - 24105724
Alignment:
Q  53 ctatgaagcacgaatacggatatggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||| ||||||||| |||||| ||||| ||||| ||||||||| || || ||||||||||||||||||  ||| ||| |||||| |||||    
T  24105629 ctatgaagcacggatacggatacggacac-gacac-ggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattaca 24105724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 32287457 - 32287404
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||| |||||||||||| | |||| |||||| ||||||||||||||||||||||    
T  32287457 gacaagtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 32287404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 416 - 469
Target Start/End: Original strand, 34506091 - 34506144
Alignment:
Q  416 aaaagcctttgtattagatgtatttccatctccaacaccaccaaaatctgtcaa 469  Q
    |||||| ||||| ||||| || |||||||| |||||||||||||||||||||||    
T  34506091 aaaagcttttgtgttagaggtttttccatcaccaacaccaccaaaatctgtcaa 34506144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 96 - 136
Target Start/End: Original strand, 35861957 - 35861997
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataatt 136  Q
    ||||||| || ||||||||||||||||||||||||||||||    
T  35861957 acacgccgacacaactaataatttgaaaaaatcacataatt 35861997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 26033513 - 26033474
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattaca 26033474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 35862027 - 35862070
Alignment:
Q  164 gacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||| || ||||||||||| |||||||||||||||||||||||    
T  35862027 gacacgaggacacgcctaatccgaggagtgtccgtgcttcatag 35862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 2334321 - 2334379
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||   |||||| ||||| ||||||||||||||| |||||||    
T  2334321 acacgacacatgtccgacactgaaacacgtctaatccgaggagtgtccgtgtttcatag 2334379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 3991328 - 3991370
Alignment:
Q  107 caactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||||||||||||||||||||| ||| || |||||    
T  3991328 caactaataatttgaaaaaatcacataattcagtataattaca 3991370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 10230073 - 10230023
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||| ||||||||||||||||| || | |||||| |||||||||||||||    
T  10230073 gtgtcggacaccagaacacgcctgatccaaggagtttccgtgcttcatagc 10230023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 11665508 - 11665466
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataatt 136  Q
    ||||||||  || ||||||||||||||||||||||||||||||    
T  11665508 tgacacgctgacacaactaataatttgaaaaaatcacataatt 11665466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 11831436 - 11831478
Alignment:
Q  107 caactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||| |||||| |||||| |||||    
T  11831436 caactaataatttgaaaaaatcatataatttagtgtaattaca 11831478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 27229298 - 27229244
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 203  Q
    |||||| |||||| |||||| || |||||||||||||||||| ||||| ||||||    
T  27229298 acacgatacgtgttcgacactaggacacgcctaattcgaggaatgtccatgcttc 27229244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 28155624 - 28155674
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||| |||||||| ||||||||||| | |||| |||||||||||||||||    
T  28155624 gtgtcggacaccaggacacgcctaatccaaggaatgtccgtgcttcatagc 28155674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 32094083 - 32094033
Alignment:
Q  100 gccaacccaactaataatttgaa-aaaatcacataattaagtgtagttaca 149  Q
    |||||| |||||||||||||||| |||||||||||||| |||||| |||||    
T  32094083 gccaacacaactaataatttgaaaaaaatcacataattcagtgtaattaca 32094033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 40287356 - 40287306
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 203  Q
    ||||| ||||||||||| | ||| ||||||| |||||||||||||||||||    
T  40287356 gacacatgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 20545242 - 20545185
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||| ||||||||||  | |||||  |||||||||||||||| ||||||||||    
T  20545242 acacgacacatgtccgacacggggacacgtttaattcgaggagtgtctgtgcttcata 20545185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 202
Target Start/End: Complemental strand, 27732242 - 27732189
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgctt 202  Q
    ||||||||  ||||||||||||| |||| ||||||||||  |||||||||||||    
T  27732242 acacgacatatgtccgacaccaggacacacctaattcgaaaagtgtccgtgctt 27732189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 27945104 - 27945137
Alignment:
Q  174 cacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||||||||||||||||    
T  27945104 cacgcctaactcgaggagtgtccgtgcttcatag 27945137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 42720942 - 42720909
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||||||||||||||||||||| ||||    
T  42720942 ctaataatttgaaaaaatcacataattaaatgta 42720909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 43027537 - 43027496
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataat 135  Q
    ||||||| | ||||| ||||||||||||||||||||||||||    
T  43027537 tgacacggcgacccagctaataatttgaaaaaatcacataat 43027496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 161 - 205
Target Start/End: Complemental strand, 9408309 - 9408265
Alignment:
Q  161 tccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||||| |||||||||||| ||| || ||||||||||||||    
T  9408309 tccgacaccaaaacacgcctaatccgaagaatgtccgtgcttcat 9408265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 13300415 - 13300455
Alignment:
Q  108 aactaataatttgaaaaaatcacataattaagtgtagttac 148  Q
    |||||||||||||||||||||| |||||| |||||| ||||    
T  13300415 aactaataatttgaaaaaatcatataattcagtgtaattac 13300455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 16341504 - 16341536
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||| |||||||||||||||||||||    
T  16341504 taataatttgagaaaatcacataattaagtgta 16341536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 29812632 - 29812596
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||| |||| ||||||||||||||||||||    
T  29812632 acacgcctaatccgagaagtgtccgtgcttcatagct 29812596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 29999026 - 29998974
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||||||||||||  |||||| |||||  ||||||||||| ||||||||    
T  29999026 gacacgtgtccgacacctaaacacgtctaatcggaggagtgtccatgcttcat 29998974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 40131989 - 40131937
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||||  | ||||| ||||| ||||||||||| |||||||||||||    
T  40131989 cgtgtccgacacagggacacgtctaatccgaggagtgtctgtgcttcatagct 40131937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 6e-66; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 32273687 - 32273552
Alignment:
Q  1 gatcatgtgacattagttgtgactgaacaatgaaagtttaaattatgataaactatgaagcacgaatacggatatggacacagacaccggacatgacacg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32273687 gatcatgtgacattagttgtgactgaacaatgaaagtttaaattatgataaactatgaagcacgaatacggatatggacacagacaccggacatgacacg 32273588  T
Q  101 ccaacccaactaataatttgaaaaaatcacataatt 136  Q
    ||||| ||||||||||||||||||||| ||||||||    
T  32273587 ccaacacaactaataatttgaaaaaataacataatt 32273552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 23292984 - 23292926
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  23292984 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 23292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 3064961 - 3064868
Alignment:
Q  114 taatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||| ||||||||| |||| |||||| ||| ||||||||| |||||||| |    ||||||||||| |||||||||||||||||||||||    
T  3064961 taatttgagaaaatcacacaattcagtgtaattatacacgacacatgtccgactctgagacacgcctaatccgaggagtgtccgtgcttcatag 3064868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 3947759 - 3947702
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||||||||||||||| |||| |||||| ||||||||||||||||||||||    
T  3947759 acacgacacgtgtccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 111 - 205
Target Start/End: Complemental strand, 22440651 - 22440559
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||||| |||||||||||||| |||||| ||| |   |||  ||||||||||| || ||||||||||| |||||||||||||||||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaattatatgtgac--gtgtccgacactaggacacgcctaatccgaggagtgtccgtgcttcat 22440559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 715603 - 715545
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  715603 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 715545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 752929 - 752871
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  752929 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 752871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 24613688 - 24613630
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||| |||||||| ||||| ||||| | |||||||||||||||||||||    
T  24613688 acacgacacgtgtctgacaccaggacacgtctaatcctaggagtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 35161097 - 35161155
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||| |||||| |||||| |||  ||||||||||||||||||    
T  35161097 acacgacacgtgtccgacaccggaacacacctaatccgaaaagtgtccgtgcttcatag 35161155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 42640589 - 42640643
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||| |||||| ||||||||||| |||||||| ||||||||||||||    
T  42640589 gacacgtgtccggcaccaggacacgcctaatccgaggagtttccgtgcttcatag 42640643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 18513224 - 18513175
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  18513224 gtgtccgacaccaggacacgcctaatctgaggagtgtccgtgcttcatag 18513175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 30982865 - 30982808
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||||||||||||| | ||||||||||| | | ||||||||||||||||||    
T  30982865 acacgacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 204
Target Start/End: Original strand, 28084589 - 28084640
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 204  Q
    ||||||||||||||||  | ||||||||||| ||||||||||||||||||||    
T  28084589 gacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 28084640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 2626009 - 2625959
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| ||| ||||||||||||| |||||| ||||||||||||||    
T  2626009 cgtgtccgacatcaggacacgcctaattcaaggagtatccgtgcttcatag 2625959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 19482740 - 19482798
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||  | |||| |||||| |||||||||| ||||||||||||    
T  19482740 acacgacacgtgtccgacactgggacacacctaatccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 22234877 - 22234819
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||||| ||||  ||||| |||| ||||| ||||||||||||    
T  22234877 acacgacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgcttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 29205529 - 29205587
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||  | ||||||||||| |||||||||| ||||||||||||    
T  29205529 acacgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcatag 29205587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Original strand, 30838285 - 30838335
Alignment:
Q  152 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgctt 202  Q
    |||||||||||||||||||  ||||||||||  ||||||||||||||||||    
T  30838285 cgacacgtgtccgacaccaagacacgcctaacccgaggagtgtccgtgctt 30838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 35157983 - 35157925
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||| ||||| |||||||| |||| |||| ||||||||||||||||||    
T  35157983 acacgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatag 35157925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 36635391 - 36635449
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||| ||| |||||| | ||||||||||| ||| |||||||||||||||||||    
T  36635391 acacgacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcatag 36635449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 11596438 - 11596365
Alignment:
Q  77 gacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||| |||||| |||| ||| ||||||||  | ||||||||||||||||||||||||||| |||||| |||||    
T  11596438 gacacggacaccagacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattaca 11596365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 35158053 - 35158004
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||| || |||||||||||||| ||||||||||||||| ||||||    
T  35158053 tgacacgccgacgcaactaataatttggaaaaatcacataatttagtgta 35158004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 36635315 - 36635364
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||| | ||||||||||||| |||||||||||||| ||||||    
T  36635315 tgacacgccaacaccactaataatttgagaaaatcacataattcagtgta 36635364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 23293055 - 23292999
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||| || || ||||||||||||||||||||||||||| ||| || |||||    
T  23293055 atgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattaca 23292999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 54580078 - 54580042
Alignment:
Q  107 caactaataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||||||||||||||||||||| ||||||    
T  54580078 caactaataatttgaaaaaatcacataattcagtgta 54580042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 12895272 - 12895213
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    |||||||| || ||||||| | | ||||||||||| |||||||||| |||||||||||||    
T  12895272 acacgacatgtatccgacatcgggacacgcctaatccgaggagtgttcgtgcttcatagc 12895213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 136
Target Start/End: Complemental strand, 12895343 - 12895300
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataatt 136  Q
    |||||||||| || ||| ||||||||||||||||||||||||||    
T  12895343 atgacacgccgacacaaataataatttgaaaaaatcacataatt 12895300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 19482659 - 19482714
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || |||||||||||||||||| |||||||||||  ||||| |||||    
T  19482659 tgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattaca 19482714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 203
Target Start/End: Complemental strand, 20743261 - 20743210
Alignment:
Q  152 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 203  Q
    |||||||||||||||||| ||||||  ||||| ||| |||||||||||||||    
T  20743261 cgacacgtgtccgacaccggaacacatctaatccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Original strand, 24343577 - 24343632
Alignment:
Q  152 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| ||||||||||||| | ||||||||| |  ||||||||||||||||||||||    
T  24343577 cgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 28964300 - 28964261
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattaca 28964261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 29205451 - 29205490
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattaca 29205490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 142
Target Start/End: Original strand, 50280873 - 50280920
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattaagtgt 142  Q
    |||||||| || || |||||||||||||||| ||||||||||||||||    
T  50280873 gacacgccgacacagctaataatttgaaaaattcacataattaagtgt 50280920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 941314 - 941368
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctca 211  Q
    ||||||||||| ||| |||| |||||| ||| || ||||||||||||||||||||    
T  941314 cgtgtccgacatcaggacacacctaatccgaagactgtccgtgcttcatagctca 941368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 5775338 - 5775304
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| |||||||||||||||||||||||    
T  5775338 acacgcctaatccgaggagtgtccgtgcttcatag 5775304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 6485662 - 6485624
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattaca 6485624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 12708225 - 12708263
Alignment:
Q  171 gaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  12708225 gaacacgcctaatccgaggagcgtccgtgcttcatagct 12708263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 12895100 - 12895054
Alignment:
Q  162 ccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    |||||||| | | ||||||||||||| ||||||||||||||||||||    
T  12895100 ccgacaccgggatacgcctaattcgaagagtgtccgtgcttcatagc 12895054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 15724541 - 15724483
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| ||||||||| ||||||| |||||||||||| |||||||| |  |||||||||||    
T  15724541 acacaacacgtgtcagacaccaaaacacgcctaatccgaggagtttatgtgcttcatag 15724483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 16073455 - 16073513
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||| || |||||||||| |  ||||||||||| |||||||||||| ||||||||||    
T  16073455 acacgatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcatag 16073513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 28964246 - 28964188
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| | ||||||||  | ||||||||||| |||||||||||| ||||||||||    
T  28964246 acacgacacatatccgacactgggacacgcctaatccgaggagtgtccatgcttcatag 28964188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 34306802 - 34306744
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||||||||||   |||||||||||  ||||| ||| ||||||||||||    
T  34306802 acacgacacgtgtccgacaccgagacacgcctaatctgaggaatgttcgtgcttcatag 34306744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 49431087 - 49431145
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||| ||||| | |||||||| || |||||||||||| ||||| ||||    
T  49431087 acacgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctttatag 49431145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 53381576 - 53381530
Alignment:
Q  161 tccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| | |||| |||||| |||||||||||||||||||||||    
T  53381576 tccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 4157210 - 4157266
Alignment:
Q  149 acacgacacgtgtccgacacc-agaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||| ||||||||||| |||| || |||||||||||||||||| |||||||||    
T  4157210 acacgacacatgtccgacaccgagaa-acacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 4157497 - 4157553
Alignment:
Q  149 acacgacacgtgtccgacacc-agaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||||||  ||||||||    
T  4157497 acacgacacatgtccgacaccgagaa-acgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 206
Target Start/End: Original strand, 4383451 - 4383484
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||| ||||||||||||||||||||||    
T  4383451 acacgcctaatccgaggagtgtccgtgcttcata 4383484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 14465063 - 14465006
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||||| ||||||  | ||||| |||||  |||||||||||||||||||||    
T  14465063 acacgacacgtgttcgacactgggacacgtctaatctgaggagtgtccgtgcttcata 14465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 1148430 - 1148370
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||||  ||||||||||||||  |||| |||| |||||| | |||||||||||    
T  1148430 acacgacacgtgtttgacaccagaacacgtataatccgagaagtgtctgagcttcatagct 1148370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 5775409 - 5775377
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||| |||||||||||||||||||||    
T  5775409 taataatttgagaaaatcacataattaagtgta 5775377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 11596345 - 11596297
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| | | |||||||||||  ||||||||||||||||||||||    
T  11596345 tgtccgacatcgggacacgcctaatctgaggagtgtccgtgcttcatag 11596297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 11931362 - 11931410
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||| |||| |||||| |  ||||||||||||||||||||    
T  11931362 tgtccgacaccaggacacacctaatccatggagtgtccgtgcttcatag 11931410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 12895190 - 12895142
Alignment:
Q  88 cggacatgacacgccaacccaactaataatttgaaaaaatcacataatt 136  Q
    |||||| |||||||| |  || |||||||||||||||||||||||||||    
T  12895190 cggacacgacacgccgaaacagctaataatttgaaaaaatcacataatt 12895142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 206
Target Start/End: Complemental strand, 17425396 - 17425348
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||| ||||| || ||||||||||| ||||||||||| ||||||||||    
T  17425396 gtgtcagacacaaggacacgcctaatccgaggagtgtctgtgcttcata 17425348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 17876237 - 17876285
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||| |||| |||||| | ||||||||| |||||||||||    
T  17876237 tgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcatag 17876285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 40965341 - 40965389
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||||||||||||  |||||||||||  |||||||||| ||||||||||    
T  40965341 gtgtccgacaccaagacacgcctaatctgaggagtgtcggtgcttcata 40965389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 47264060 - 47264116
Alignment:
Q  151 acgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||| |||| |||||||| ||||||||||| ||| ||| ||| |||||||||||    
T  47264060 acgacacatgtctgacaccaggacacgcctaatccgaagagcgtctgtgcttcatag 47264116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 3e-43; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 262 - 483
Target Start/End: Original strand, 11064995 - 11065216
Alignment:
Q  262 atacctgagaagcaaggagaacagcatctctatccaaatagagagtaaagtgactagtaagactaaaactaccagtgagccattttcctgctggaacata 361  Q
    |||||||||||||||| |||||||||||| | |  | ||| ||||| ||||||||  |||||||||| || ||||| ||||||||||| || ||||||||    
T  11064995 atacctgagaagcaagaagaacagcatctttgtgtagataaagagtgaagtgacttataagactaaagctcccagtaagccattttccagcaggaacata 11065094  T
Q  362 cagctgagaaccaccttgagaaccatactgactcaggtgactaattgcagactgaaaagcctttgtattagatgtatttccatctccaacaccaccaaaa 461  Q
    ||  ||||| || |||| |||| ||| ||||||||  ||||| |||||||| | |||||||||||| || ||||| ||||||||||||||||||||||||    
T  11065095 caattgagaccctccttcagaagcattctgactcaaatgacttattgcagatttaaaagcctttgtgtttgatgtttttccatctccaacaccaccaaaa 11065194  T
Q  462 tctgtcaatgaagcactatgtg 483  Q
    ||  |||||||| |||||||||    
T  11065195 tccttcaatgaaacactatgtg 11065216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 25566787 - 25566887
Alignment:
Q  53 ctatgaagcacgaatacggatatggacacagacaccggacatgacac-gcca---acccaactaataatttgaaaaaatcacataattaagtgtagttac 148  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| | ||   || || ||||||||||||||||||||||||||| |||||| ||||    
T  25566787 ctatgaagcacggatacggatatagacacagacaccggacatgacacagacactgacacagctaataatttgaaaaaatcacataattcagtgtaattac 25566886  T
Q  149 a 149  Q
    |    
T  25566887 a 25566887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 14134760 - 14134820
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||    
T  14134760 acacgacacgtgtccgtcaccaggacacgcctaattcgaggagtgtccgtgtttcatagct 14134820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 36450822 - 36450692
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttac---------------acacgacacgtgtccgacaccagaacacgc 178  Q
    ||||||||| || ||||||||||||||||||||||||| |||| |||||| ||||               ||||||| ||||||||||||||| ||||||    
T  36450822 tgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtaggtgtcggacacgacgcgtgtccgacaccaggacacgc 36450723  T
Q  179 ctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||| ||||||||||| |||||||||||||    
T  36450722 ctaatccgaggagtgtctgtgcttcatagct 36450692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 44067596 - 44067644
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  44067596 cgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 6065644 - 6065585
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||||||| ||||||||||| |||||||| |||||| ||||||||||||||||||||||    
T  6065644 acacgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcatagc 6065585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 5813653 - 5813707
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 203  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||||||||||||    
T  5813653 acacgacacgtgtccgacaccgggacacgcctaattggaggagtgtccgtgcttc 5813707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 18407780 - 18407838
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| |||||||||| || |||||||||||| ||||||||||||||||||||||    
T  18407780 acacgacacatgtccgacactaggacacgcctaattggaggagtgtccgtgcttcatag 18407838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 22652048 - 22652108
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||| |||||||||||| | ||||| ||||| |||||||||||||||||||||||||    
T  22652048 acacgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatagct 22652108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 8343388 - 8343446
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||| | ||||||||||| ||| ||||||| |||||||||||    
T  8343388 acacgacacgtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 21465484 - 21465546
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctca 211  Q
    ||||||||||||||| ||||  | | |||||||||| ||||||||||||||||||||||||||    
T  21465484 acacgacacgtgtccaacacagggatacgcctaatttgaggagtgtccgtgcttcatagctca 21465546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 29510291 - 29510233
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||| ||||||||||||| | |||| |||||| |||||||||||||||||||||||    
T  29510291 acacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Complemental strand, 3951534 - 3951469
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcagaa 214  Q
    |||||||||||||| |||||  ||||||||||||| | |||||| |||||||||||||||| ||||    
T  3951534 acacgacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcatagcttagaa 3951469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 15816197 - 15816148
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  15816197 tgacacgccgacacaactaataatttgaaaaaatcacataatttagtgta 15816148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 29447097 - 29447040
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||||||| ||||| |||||||| ||||||||||| | ||||||||||||||||||||    
T  29447097 acacgacatgtgtctgacaccaggacacgcctaatcctaggagtgtccgtgcttcata 29447040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 15816116 - 15816056
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||  ||||||||| | ||||||||||| |||| ||||||||||||||||||||    
T  15816116 acacgacacgaatccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatagct 15816056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 3658224 - 3658271
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||| ||  ||||||||||||||||||||||||||||||||||    
T  3658224 tgtccgacatcaagacacgcctaattcgaggagtgtccgtgcttcata 3658271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 149
Target Start/End: Complemental strand, 30271375 - 30271304
Alignment:
Q  79 cacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||| ||||||||| || || ||||| ||||||||||||||||||||  |||||| |||||    
T  30271375 cacagacaccggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattaca 30271304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 22197725 - 22197671
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||| || ||||||||||  ||||||||||||||||| ||||    
T  22197725 gacacgtgtccgacaccggatcacgcctaatctgaggagtgtccgtgctttatag 22197671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 22943347 - 22943301
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtc 195  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||    
T  22943347 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtc 22943301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 30077454 - 30077400
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||| || ||||||||||||||| ||||||||||| |||||| |||||    
T  30077454 gacacgccaacgcagctaataatttgaaaacatcacataattcagtgtaattaca 30077400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 4948657 - 4948698
Alignment:
Q  108 aactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattaca 4948698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 22197808 - 22197755
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||| || |||||||||||||||| |||||||||| |||||| |||||    
T  22197808 acacgccaacacagctaataatttgaaaaattcacataatttagtgtaattaca 22197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 29447516 - 29447581
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcagaa 214  Q
    |||||||| |||||||||||| | ||| | |||||  |||||||||||||||||||||| ||||||    
T  29447516 acacgacatgtgtccgacaccgggacaggtctaatcggaggagtgtccgtgcttcatagatcagaa 29447581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 11803333 - 11803389
Alignment:
Q  151 acgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||| ||||||||||  | ||||| ||||| |||||||||||||||||||||||    
T  11803333 acgacacatgtccgacacaggtacacgtctaatccgaggagtgtccgtgcttcatag 11803389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 13397622 - 13397670
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||   ||||||||||||| |||||||||||||||||||||    
T  13397622 tgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcatag 13397670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 2572108 - 2572069
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  2572108 ctaataatttgaaaaaatcacataatttagtgtaattaca 2572069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 8342979 - 8343018
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  8342979 ctaataatttgaaaaaatcacataatttagtgtaattaca 8343018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 8343323 - 8343362
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  8343323 ctaataatttgaaaaaatcacataatttagtgtaattaca 8343362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 24205796 - 24205749
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||| |||||| ||||||||||||| ||||||||||||||| ||||||    
T  24205796 tgtctgacaccggaacacgcctaatccgaggagtgtccgtgtttcata 24205749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 24727735 - 24727684
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 204  Q
    ||||||||||| | ||||||||||||||||| |||| ||||| |||||||||    
T  24727735 gacacgtgtccaataccagaacacgcctaatccgagaagtgttcgtgcttca 24727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 31514939 - 31514974
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||||||||| ||||||||||||||||||||||||    
T  31514939 acacgcctaatccgaggagtgtccgtgcttcatagc 31514974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Original strand, 40332252 - 40332307
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 204  Q
    ||||||||||||||| ||||| | || |||||||| ||||||||||||||| ||||    
T  40332252 acacgacacgtgtcccacaccgggacgcgcctaatccgaggagtgtccgtgtttca 40332307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 41831933 - 41831874
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    |||||| |||| ||||||| ||| ||||| |||||||||||||||||| | |||||||||    
T  41831933 acacgatacgtatccgacaacaggacacgtctaattcgaggagtgtccattcttcatagc 41831874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 161 - 207
Target Start/End: Complemental strand, 4673400 - 4673354
Alignment:
Q  161 tccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||||| | ||||||||| |||||||||||    
T  4673400 tccgacaccggaacacgcctaatccaaggagtgtctgtgcttcatag 4673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 12570496 - 12570438
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| |||||||||||||||||| |||||||||||  || || ||||||||||| ||||    
T  12570496 acactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 12570722 - 12570664
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| |||||||||||||||||| |||||||||||  || || ||||||||||| ||||    
T  12570722 acactacacgtgtccgacaccaggacacgcctaatctgaagattgtccgtgctttatag 12570664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 136
Target Start/End: Complemental strand, 13437032 - 13436990
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataatt 136  Q
    ||||||||| || || |||||||||||||||||||||||||||    
T  13437032 tgacacgccgacacagctaataatttgaaaaaatcacataatt 13436990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 149
Target Start/End: Original strand, 20873077 - 20873115
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattaca 20873115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 22651967 - 22652009
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataatt 136  Q
    ||||||||| || || |||||||||||||||||||||||||||    
T  22651967 tgacacgccgacacagctaataatttgaaaaaatcacataatt 22652009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 28745570 - 28745632
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctca 211  Q
    ||||||||| |||||| ||||   ||| | ||||||| |||||||||||||||||||||||||    
T  28745570 acacgacacctgtccgtcaccgagacaagtctaattcaaggagtgtccgtgcttcatagctca 28745632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 31557057 - 31557115
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||||| ||||||||||| | ||| |||||| ||| ||||||    
T  31557057 acacgacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcatag 31557115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 34451019 - 34450961
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||| |||||  | |||||||| || | |||||||||||||||||||||    
T  34451019 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 34450961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 152 - 210
Target Start/End: Original strand, 39820493 - 39820550
Alignment:
Q  152 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctc 210  Q
    |||| ||||||||||||  || |||||||||| |||| |||||||||||||||||||||    
T  39820493 cgacgcgtgtccgacacggga-cacgcctaatccgagaagtgtccgtgcttcatagctc 39820550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Complemental strand, 926783 - 926730
Alignment:
Q  152 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||||||||||||| | ||| || | || |||||||||||||||||||||    
T  926783 cgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 8343037 - 8343086
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||| | ||||||||||| ||| ||||||| |||||||||||    
T  8343037 gtgtccgacaccgggacacgcctaatccgaagagtgtctgtgcttcatag 8343086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 17751730 - 17751775
Alignment:
Q  162 ccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||| | ||||||||||| ||||||||||||| |||||||||    
T  17751730 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17751775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 17760717 - 17760762
Alignment:
Q  162 ccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||| | ||||||||||| ||||||||||||| |||||||||    
T  17760717 ccgacaccgggacacgcctaatccgaggagtgtccgcgcttcatag 17760762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 949315 - 949279
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgtagtta 147  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  949315 taataatttgaaaaaatcaaataattaagtgcagtta 949279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 3025612 - 3025668
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||||||||| |||||    ||||| ||||| |||||||||||||||||||||    
T  3025612 acacgacacgtgtctgacactgtgacacggctaatccgaggagtgtccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 4122236 - 4122176
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||||  |||||| ||||||| ||||| | | ||||||||||||||| |||||    
T  4122236 acacgacacgtgttggacaccggaacacgtctaatccaaagagtgtccgtgcttcgtagct 4122176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Original strand, 13403177 - 13403225
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||   |||||| |||||| |||||||||||||||||||||    
T  13403177 tgtccgacaccgagacacgcttaattcaaggagtgtccgtgcttcatag 13403225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 24196664 - 24196628
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcaca 131  Q
    |||||||| || |||||||||||||||||||||||||    
T  24196664 gacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 41831991 - 41831959
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||||||||||||||||| ||||||    
T  41831991 taataatttgaaaaaatcacataattcagtgta 41831959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 94 - 207
Target Start/End: Original strand, 11610512 - 11610628
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttacacacgaca---cgtgtccgacaccagaacacgcctaattcgagga 190  Q
    |||||||||||| |  |||||||||| |||||||||||||||| ||||||||||||   | ||   ||||||||||| | | |||||||||||  |||||    
T  11610512 tgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagtgtcaagtcgtgtccgacatcgggacacgcctaatctgagga 11610611  T
Q  191 gtgtccgtgcttcatag 207  Q
    |||||||||||||||||    
T  11610612 gtgtccgtgcttcatag 11610628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 28812492 - 28812561
Alignment:
Q  80 acagacaccggacatgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||| |||||| |||||||| || |||||||||||||||| ||||||||||||| ||||||||||||    
T  28812492 acagacaacggacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttaca 28812561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 24205031 - 24204983
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  24205031 cgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 55401136 - 55401196
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||||||||||||   ||||||||||| |||||||||||||||||||||||||    
T  55401136 acacgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatagct 55401196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 27505312 - 27505371
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||    
T  27505312 acacgacacgtgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcatagc 27505371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 83 - 149
Target Start/End: Original strand, 34910297 - 34910363
Alignment:
Q  83 gacaccggacatgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||| |||| |||||||| || |||||||||||||||||||||||||||||| |||||| |||||    
T  34910297 gacaccagacacgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattaca 34910363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 4987278 - 4987222
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||||||||||||||| | ||||||||||| |||||||||||||| ||||||    
T  4987278 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 20503526 - 20503584
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| |||| |||||| | ||||||||||| |||||||||||||||||||||||    
T  20503526 acacgacacatgtctgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 20503584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 34185106 - 34185052
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| |||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  34185106 gacatgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 34185052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 40993333 - 40993275
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||| | ||||||||||| |||||||||||| ||||||||||    
T  40993333 acacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttcatag 40993275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 41961637 - 41961579
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||  | ||||||||||| |||| ||||||||||||||||||    
T  41961637 acacgacacgtgtccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 10954943 - 10954992
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  10954943 tgacacgccgacacaactaataatttgaaaaaatcacataattcagtgta 10954992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 16000008 - 15999951
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||||||||||||| | ||||||||||| | |||||||||||||| |||||    
T  16000008 acacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 25775576 - 25775624
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||||||||    
T  25775576 cgtgtccgacaccaggacacgcctaatccgaggagtgttcgtgcttcat 25775624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 3631745 - 3631796
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgc 200  Q
    ||||||||| ||||||||||||| ||||||||| | ||||||||||||||||    
T  3631745 acacgacacatgtccgacaccaggacacgcctagtccgaggagtgtccgtgc 3631796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 4987359 - 4987304
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  4987359 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 4987304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 8587089 - 8587034
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || ||| |||||||||||||||||||||||||||||| |||||    
T  8587089 tgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattaca 8587034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 11666011 - 11666070
Alignment:
Q  144 gttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 203  Q
    |||| |||||||||||||| || | | ||||||||||||||| |||||||||||||||||    
T  11666011 gttagacacgacacgtgtctgatatcggaacacgcctaattcaaggagtgtccgtgcttc 11666070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 149
Target Start/End: Original strand, 14209100 - 14209159
Alignment:
Q  90 gacatgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||| |||||||| || ||||||||||||| |||||||||||||||| |||||| |||||    
T  14209100 gacacgacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattaca 14209159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 156 - 207
Target Start/End: Original strand, 40052380 - 40052431
Alignment:
Q  156 acgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||| | ||||||||||| |||||||||| ||||||||||||    
T  40052380 acgtgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcatag 40052431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 149
Target Start/End: Original strand, 55401070 - 55401121
Alignment:
Q  98 acgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||| || |||||||||||||||||||||||||||||| |||||| |||||    
T  55401070 acgccgacacaactaataatttgaaaaaatcacataatttagtgtaattaca 55401121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 3164021 - 3163971
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||   |||||||||||||||||||||||| ||||||||||    
T  3164021 cgtgtccgacaccgagacacgcctaattcgaggagtgtccatgcttcatag 3163971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 110 - 207
Target Start/End: Complemental strand, 5407299 - 5407199
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttacacac---gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||| ||||||| |||||||||||||| | |||| ||| | ||   |||||||||||||| |||| ||||||||||| | | |||||||| |||||||||    
T  5407299 ctaaaaatttgagaaaatcacataattcattgtaattatagacacagacacgtgtccgacgccaggacacgcctaatccaaagagtgtccatgcttcata 5407200  T
Q  207 g 207  Q
    |    
T  5407199 g 5407199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 11252037 - 11252095
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| ||||||||||| || | ||||||||||||| ||||||||||| |||||||||||    
T  11252037 acacaacacgtgtccggcatcggaacacgcctaatccgaggagtgtctgtgcttcatag 11252095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 14747510 - 14747608
Alignment:
Q  52 actatgaagcacgaatacggatatggacacag-acaccggaca-tgacacgccaacccaactaataatttg-aaaaaatcacataattaagtgtagttac 148  Q
    ||||||||||||| ||||||||| |||||| | ||||  |||| ||||||||| || || ||||||||||| |||||||||||||||| |||||| ||||    
T  14747510 actatgaagcacggatacggatacggacaccggacac--gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattac 14747607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 1389908 - 1389956
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||||||||||||| ||| ||||||| | ||||||||||||||||||||    
T  1389908 gtgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 4201404 - 4201436
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||||||||||||||||||||||||    
T  4201404 taataatttgaaaaaatcacataattaagtgta 4201436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 4990946 - 4990910
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||| |||||||||||||||||||||||||    
T  4990946 acacgcctaatccgaggagtgtccgtgcttcatagct 4990910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 10955013 - 10955075
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgagg---agtgtccgtgcttcatagc 208  Q
    ||||||||||||||||||||  | ||||||||||| |||||   |||||||||||||||||||    
T  10955013 acacgacacgtgtccgacactgggacacgcctaatccgaggagtagtgtccgtgcttcatagc 10955075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 15796281 - 15796221
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||| |||||||||| ||||| ||||||||||||| | | |||||| ||||||||||||||    
T  15796281 acacaacacgtgtccaacaccggaacacgcctaatccaaagagtgttcgtgcttcatagct 15796221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 28918064 - 28918120
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||||||||||||||  | ||||||||||| | |||||||||| ||||||||    
T  28918064 acacgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 1509546 - 1509585
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  1509546 ctaataatttgaaaaaatcacataatttagtgtaattaca 1509585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 5441026 - 5440967
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacg-cctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||| |||||   ||||| ||||||||||||||||||||||||||||||    
T  5441026 acacgacacatgtccaacaccgagacacggcctaattcgaggagtgtccgtgcttcatag 5440967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 10268554 - 10268499
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || ||  |||||||||||||||||||||||||| |||||| |||||    
T  10268554 tgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattaca 10268499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 20503456 - 20503511
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || |||| |||||||||||||||| |||||||| |||||| |||||    
T  20503456 tgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattaca 20503511  T

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Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 26508117 - 26508156
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  26508117 ctaataatttgaaaaaatcacataattcagtgtaattaca 26508156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 28918008 - 28918047
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  28918008 ctaataatttgaaaaaatcacataattcagtgtaattaca 28918047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 8842414 - 8842448
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| |||||||||||||||||||||||    
T  8842414 acacgcctaatccgaggagtgtccgtgcttcatag 8842448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 201
Target Start/End: Complemental strand, 12704639 - 12704597
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgct 201  Q
    ||||||||||||||||||| ||||| | |||||||||||||||    
T  12704639 tgtccgacaccagaacacgtctaatcctaggagtgtccgtgct 12704597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 14979175 - 14979221
Alignment:
Q  97 cacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    |||||| || || ||||||||||||||||||||||||||| ||||||    
T  14979175 cacgccgacacagctaataatttgaaaaaatcacataattcagtgta 14979221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 148
Target Start/End: Original strand, 21479109 - 21479163
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttac 148  Q
    ||||||||| || || |||||||||||||||||||||| |||| |||||| ||||    
T  21479109 tgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattac 21479163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 25775481 - 25775555
Alignment:
Q  77 gacacagacaccggaca-tgacacgccaacccaactaataatttgaaaa-aatcacataattaagtgtagttaca 149  Q
    ||||| ||||| ||||| |||||||||||| ||  |||||||||||||| |||||||||||| |||||| |||||    
T  25775481 gacacggacactggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattaca 25775555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 28812587 - 28812645
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||| || ||||||||| ||| ||||||||||| ||||||||||| |||| ||||||    
T  28812587 acacgatacatgtccgacagcaggacacgcctaatccgaggagtgtctgtgcctcatag 28812645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 40052323 - 40052365
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataatt 136  Q
    ||||||||| || || |||||||||||||||||||||||||||    
T  40052323 tgacacgccgacacagctaataatttgaaaaaatcacataatt 40052365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 49651774 - 49651716
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| | ||||||||| | |||| |||||| |||| ||||||||||||||||||    
T  49651774 acacgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 2620121 - 2620072
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||| || | |||||| |||||| |||||||||||||||||||||    
T  2620121 tgacacgccgacaccactaatcatttgagaaaatcacataattaagtgta 2620072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 3164077 - 3164044
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||||||||||||||||||| ||||||    
T  3164077 ctaataatttgaaaaaatcacataattcagtgta 3164044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 4466589 - 4466540
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||  | ||||| || ||||||||||||||||||||||||||    
T  4466589 gtgtccgacactgggacacggcttattcgaggagtgtccgtgcttcatag 4466540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 7928457 - 7928490
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||||||||||||||||||| ||||||    
T  7928457 ctaataatttgaaaaaatcacataattcagtgta 7928490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 8789522 - 8789489
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||| ||||||||||||||||||||||    
T  8789522 acacgcctaatccgaggagtgtccgtgcttcata 8789489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 10335354 - 10335305
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||| || ||||||||||||||||||| ||||||| || ||||||    
T  10335354 tgacacgccgacacaactaataatttgaaaaagtcacatattttagtgta 10335305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 14216964 - 14217021
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||    
T  14216964 acacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 14223093 - 14223150
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||||| ||||||  | |||| |||||| |||| |||||||||||||||||    
T  14223093 acacgacacgtgtacgacactgggacacacctaatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 16000084 - 16000035
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||| || ||||||||||||| ||||||| |||||||| ||||||    
T  16000084 tgacacgccgacacaactaataatttaaaaaaataacataattcagtgta 16000035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 25948939 - 25948906
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||||||||||||||||||| ||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgta 25948906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 194
Target Start/End: Original strand, 26665205 - 26665242
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgt 194  Q
    |||||||||||||||||||| |||||||| ||||||||    
T  26665205 cgtgtccgacaccagaacacccctaattcaaggagtgt 26665242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 38731225 - 38731262
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagtta 147  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  38731225 ctaataattttaaaaaatcacataattcagtgtagtta 38731262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 51206405 - 51206372
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||||||||||||||||||| ||||||    
T  51206405 ctaataatttgaaaaaatcacataattcagtgta 51206372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 1509637 - 1509681
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgctt 202  Q
    |||||||||||| | |||||||||||  |||||||||||||||||    
T  1509637 gtgtccgacaccggtacacgcctaatcggaggagtgtccgtgctt 1509681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 13807229 - 13807273
Alignment:
Q  163 cgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||| || ||| ||||||||||||||||||||||| |||||||    
T  13807229 cgacactaggacatgcctaattcgaggagtgtccgtgtttcatag 13807273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 15796363 - 15796307
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||| || ||  ||||||||||||||||||| |||||| |||||| |||||    
T  15796363 atgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattaca 15796307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 17276792 - 17276848
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||||||||   || | |||||| |||| ||||||||||||||||||||    
T  17276792 gacacgtgtccgacaccgagacgcacctaatccgagaagtgtccgtgcttcatagct 17276848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 151 - 207
Target Start/End: Original strand, 18427012 - 18427068
Alignment:
Q  151 acgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||| |||| | |||| ||||||  |||||||||||||| |||||||    
T  18427012 acgacacgtgtccggcaccgggacacacctaatctgaggagtgtccgtgtttcatag 18427068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 136
Target Start/End: Original strand, 24633751 - 24633799
Alignment:
Q  88 cggacatgacacgccaacccaactaataatttgaaaaaatcacataatt 136  Q
    ||||||||||| ||| || | ||||||||||||| ||||||||||||||    
T  24633751 cggacatgacatgccgacaccactaataatttgagaaaatcacataatt 24633799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 5e-17; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 46940849 - 46940748
Alignment:
Q  107 caactaataatttgaaaaaa-tcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||| ||||||||||| | ||||||||||||||| |||||     | ||||||||||||| ||||||||||||| |||||||||| ||||||||||    
T  46940849 caactaattatttgaaaaaaataacataattaagtgtaattacaagtttcgcgtgtccgacaccggaacacgcctaatccgaggagtgttcgtgcttcat 46940750  T
Q  206 ag 207  Q
    ||    
T  46940749 ag 46940748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 40917821 - 40917884
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcag 212  Q
    ||||||||||||||||||||| | ||||||||||| |||||| |||||||||||||||| ||||    
T  40917821 acacgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcataggtcag 40917884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 9828116 - 9828174
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||    
T  9828116 acacgacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 18471356 - 18471414
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||||||||||  ||||| ||||||||||||||||||||| ||||||||    
T  18471356 acacgacacgtgtccgacaccgaaacacacctaattcgaggagtgtccgtacttcatag 18471414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Original strand, 9828019 - 9828084
Alignment:
Q  78 acacagacaccggacatgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||||||| |||||||| || | ||||||||||||| |||||||||||||| ||||||    
T  9828019 acacagacaccggacacgacacgccgacaccactaataatttgataaaatcacataattcagtgta 9828084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 207
Target Start/End: Original strand, 37598804 - 37598950
Alignment:
Q  76 ggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagtta---------------cacacgacacgt 159  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| |||| |||||| |||                |||||||||||    
T  37598804 ggacacagacaccggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtcggacacgacacgt 37598902  T
Q  160 gtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||   | ||||||||||| |||||||||||||||||||||||    
T  37598903 gtccgacaatgggacacgcctaatccgaggagtgtccgtgcttcatag 37598950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 40258931 - 40258874
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||| ||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  40258931 acacgacacctgtccgacaccaggacacgcctaatccgaggagtgtccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 94 - 209
Target Start/End: Complemental strand, 48450655 - 48450548
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtg 193  Q
    |||||||||||| || |||||||||||||||||| |||||||| |||||| ||       ||| ||||| |||| ||| ||||| ||||| |||||||||    
T  48450655 tgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaatt-------acaagtgtcggaca-caggacacgtctaatccgaggagtg 48450564  T
Q  194 tccgtgcttcatagct 209  Q
    ||||||||||||||||    
T  48450563 tccgtgcttcatagct 48450548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 1486702 - 1486646
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||||||||||||||| | ||||||||||| ||||||||||| |||||||||    
T  1486702 acacgacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 16297279 - 16297223
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||  |||||||||||||| ||||||||||| |||||||||||||||||||||    
T  16297279 acacgacgtgtgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 22881716 - 22881629
Alignment:
Q  68 acggatatggacacagacaccggaca------tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||| ||||| |||||||||||      ||||||||| || |||||||||||||||||||||||||||||| |||||| |||||    
T  22881716 acggatatagacacggacaccggacacgacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattaca 22881629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 6427536 - 6427594
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||| | |||||||||||  || |||||||||||||||||||    
T  6427536 acacgacacgtgtccgacaccgggacacgcctaatctgatgagtgtccgtgcttcatag 6427594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 29144369 - 29144320
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||| ||||||||||||| ||| |||||||||||||||||||    
T  29144369 gtgtccgacaccggaacacgcctaatccgaagagtgtccgtgcttcatag 29144320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 113290 - 113345
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  113290 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 113345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 25452155 - 25452108
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  25452155 gtgtcagacaccggaacacgcctaattcgagcagtgtccgtgcttcat 25452108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 158 - 205
Target Start/End: Complemental strand, 42359438 - 42359391
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||||||| | ||||||||||| |||||||||||||||||||||    
T  42359438 gtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 2218297 - 2218347
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||| || |||||||||||  ||||||||||||||||||||||    
T  2218297 cgtgtccgacactaggacacgcctaatctgaggagtgtccgtgcttcatag 2218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 5898264 - 5898206
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||| ||||| | ||||| ||||| |||||||||||||||||| ||||    
T  5898264 acacgacacgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctttatag 5898206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 18337390 - 18337452
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctca 211  Q
    |||| |||||||||||||||  | ||| |||| || |||||||||||||||||||||||||||    
T  18337390 acacaacacgtgtccgacactgggacatgcctgatccgaggagtgtccgtgcttcatagctca 18337452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 21378528 - 21378624
Alignment:
Q  52 actatgaagcacgaatacggatatggacacagacaccggacat-gacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||| ||||| || || || ||||||| |||||||||| |||||||| |||||| |||||    
T  21378528 actatgaagcacggatacagatatggacac-gaca-cggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattaca 21378624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 22515885 - 22515827
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| | |||||||||   ||||||||||| |||||||||||||||||||||||    
T  22515885 acacgacacatatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 22515827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 24577241 - 24577199
Alignment:
Q  107 caactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||||||||||||||||||||| |||||| |||||    
T  24577241 caactaataatttgaaaaaatcacataattcagtgtaattaca 24577199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 206
Target Start/End: Original strand, 28663677 - 28663715
Alignment:
Q  168 ccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  28663677 ccagaacacgcctaattcgaggagtgtctgtgcttcata 28663715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 46348381 - 46348323
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||||||||||   |||||||| || ||||| |||||||||||||||||    
T  46348381 acacgacacgtgtccgacaccgagacacgcctgatccgaggtgtgtccgtgcttcatag 46348323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 47989569 - 47989627
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| |||| |||| | | ||||||||||| |||||||||||||||||||||||    
T  47989569 acacgacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 47989627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 35702640 - 35702533
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacacca--gaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||||  ||| ||||||||||||| |||||   | || ||||| ||||| |  | ||||||||||| |||||||||||||||||||||||    
T  35702640 ctaataatttgaaaacttcaaataattaagtgtaattacaagtgtca-gtgtcggacacgatgggacacgcctaatccgaggagtgtccgtgcttcatag 35702542  T
Q  208 ctcagaagt 216  Q
     | ||||||    
T  35702541 ttaagaagt 35702533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 71 - 136
Target Start/End: Complemental strand, 43492585 - 43492520
Alignment:
Q  71 gatatggacacagacaccggacatgacacgccaacccaactaataatttgaaaaaatcacataatt 136  Q
    |||| |||||||||||||||||| |||||||| || | |||| |||||||| |||||||| |||||    
T  43492585 gatacggacacagacaccggacacgacacgccgacaccactagtaatttgagaaaatcacgtaatt 43492520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 48547970 - 48547937
Alignment:
Q  175 acgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||||||||||||||||||||||||||||||||    
T  48547970 acgcctaattcgaggagtgtccgtgcttcatagc 48547937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 10233326 - 10233374
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||||||||||||| |||| ||||||  |||||||||||||||||||||    
T  10233326 gtgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 15323233 - 15323289
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||||||||  ||||| |||||| ||||||||||| ||| |||||||||    
T  15323233 gacacgtgtccgacaccgaaacacacctaatccgaggagtgtcagtgtttcatagct 15323289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 31694683 - 31694639
Alignment:
Q  163 cgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||| |||||||||||||  ||||||||||||||||||||||    
T  31694683 cgacaccggaacacgcctaatctgaggagtgtccgtgcttcatag 31694639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 42004929 - 42004882
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||    
T  42004929 tgtccgacacta-aacacgcctaattcgaagagtgtccgtgcttcatag 42004882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 48040464 - 48040412
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||||  | |||||||||||| |||||||||||||||||| |||||    
T  48040464 cgtgtccgacactgggacacgcctaattggaggagtgtccgtgcttcgtagct 48040412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 207
Target Start/End: Complemental strand, 7918197 - 7918154
Alignment:
Q  164 gacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||| |||| |||||| |||||||||||||||||||||||    
T  7918197 gacaccaggacacacctaatccgaggagtgtccgtgcttcatag 7918154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 152 - 207
Target Start/End: Complemental strand, 18556440 - 18556385
Alignment:
Q  152 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||| ||||||||  | ||||||||||| |||| ||||||||||||||||||    
T  18556440 cgacacgtatccgacactgggacacgcctaatccgagaagtgtccgtgcttcatag 18556385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 22515939 - 22515900
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  22515939 ctaataatttgaaaaaatcacataatttagtgtaattaca 22515900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 22947806 - 22947849
Alignment:
Q  164 gacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||| | ||||||||||| |||||||||||||||||||||||    
T  22947806 gacacctggacacgcctaatccgaggagtgtccgtgcttcatag 22947849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 32461451 - 32461392
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    |||||||||||||| |||||  | ||||||||||| | || |||||||||||||||||||    
T  32461451 acacgacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcatagc 32461392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 32461531 - 32461476
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||  | |||||||||||||||||||||||||||||| | |||| |||||    
T  32461531 tgacacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattaca 32461476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 46348451 - 46348396
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || |||||||||||||||||||| |||||| |||||| |||||    
T  46348451 tgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattaca 46348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 48040583 - 48040536
Alignment:
Q  53 ctatgaagcacgaatacggatatggacacagacaccggacatgacacg 100  Q
    |||||||||||| ||||||||||||| || ||||||||||| ||||||    
T  48040583 ctatgaagcacgtatacggatatggatacggacaccggacacgacacg 48040536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 1815318 - 1815376
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||| | |||||||||||  |||||||| ||||| |||||||    
T  1815318 acacgacacatgtccgacaccgggacacgcctaatctgaggagtgaccgtgattcatag 1815376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 5944355 - 5944413
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| |||| ||||||||||| | | ||||||||| |||||||||| ||||||||||||    
T  5944355 acacaacacatgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 21366026 - 21365992
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| |||||||||||||||||||||||    
T  21366026 acacgcctaatccgaggagtgtccgtgcttcatag 21365992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 159 - 209
Target Start/End: Complemental strand, 22794066 - 22794016
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||| || | |||| ||||||||||||||||| ||||||||||||||    
T  22794066 tgtccgactccgggacacacctaattcgaggagtgtacgtgcttcatagct 22794016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 34712377 - 34712323
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| ||||  | ||||| ||||||| |||||||||||||||||||||    
T  34712377 gacacgtgtcctacactgggacacgtctaattcaaggagtgtccgtgcttcatag 34712323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 38078659 - 38078601
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||| | ||||||| ||||||||||| |||||||| | ||||||||||||    
T  38078659 acacgacacatgttcaacaccaggacacgcctaatccgaggagtattcgtgcttcatag 38078601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 40258984 - 40258946
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattaca 40258946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 398817 - 398784
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||||||||||||||||||| ||||||    
T  398817 ctaataatttgaaaaaatcacataattcagtgta 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Complemental strand, 1486761 - 1486728
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||||||||||||||||||| ||||||    
T  1486761 ctaataatttgaaaaaatcacataattcagtgta 1486728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 206
Target Start/End: Complemental strand, 10572568 - 10572535
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||||| ||||||||||||||||||||    
T  10572568 acacgcctaattcaaggagtgtccgtgcttcata 10572535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 16164297 - 16164244
Alignment:
Q  154 acacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||||||| ||||||||||| ||| ||||||  ||| |||||||    
T  16164297 acacgtgtccgacaccaggacacgcctaatccgaagagtgtatgtgtttcatag 16164244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 17778617 - 17778670
Alignment:
Q  152 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||||||||||||| | ||| ||||||| |||| ||||| ||||||||||    
T  17778617 cgacacgtgtccgacaccgggacatgcctaatccgagaagtgttcgtgcttcat 17778670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 18337338 - 18337375
Alignment:
Q  112 aataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattaca 18337375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 27965983 - 27965938
Alignment:
Q  164 gacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||| | ||||||||||| |||||||||||| ||||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcatagct 27965938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 52903316 - 52903365
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||| | ||||| || |||||| |||||||||||||||||||    
T  52903316 gtgtccgacaccgggacacggcttattcgaagagtgtccgtgcttcatag 52903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 12443527 - 12443479
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||| || || |||||||||||| |||||||||||||| ||||||    
T  12443527 gacacgccgacacagctaataatttgagaaaatcacataattcagtgta 12443479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 165 - 201
Target Start/End: Complemental strand, 13011208 - 13011172
Alignment:
Q  165 acaccagaacacgcctaattcgaggagtgtccgtgct 201  Q
    |||||||||||| |||||| |||||||||||||||||    
T  13011208 acaccagaacacacctaatccgaggagtgtccgtgct 13011172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 13011268 - 13011228
Alignment:
Q  110 ctaataatttgaaaaaa-tcacataattaagtgtagttaca 149  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  13011268 ctaataatttgaaaaaaatcacataattaagtgtaattaca 13011228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 143
Target Start/End: Original strand, 15323171 - 15323203
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||||||||||||||||| ||||||    
T  15323171 taataatttgaaaaaatcacataatttagtgta 15323203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 22881611 - 22881567
Alignment:
Q  163 cgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||| | ||||| ||||| |||||||||||||||||||||||    
T  22881611 cgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22881567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 143
Target Start/End: Original strand, 30359392 - 30359428
Alignment:
Q  107 caactaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||| |||||||||||||||||||||||| ||||||    
T  30359392 caactgataatttgaaaaaatcacataatttagtgta 30359428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 36878551 - 36878587
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||| | |||||||||||||||||||||||    
T  36878551 acacgcctaatcccaggagtgtccgtgcttcatagct 36878587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 40917742 - 40917795
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || |||||||||||||||||||||  ||||||||||| |||||    
T  40917742 tgacacgccgacacagctaataatttgaaaaaatcac--aattaagtgtaattaca 40917795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 3000 - 3059
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  3000 acacgacacgtgttcgacaccggaacacgcctaatccgaggagtgtccgtgctccatagc 3059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 8e-16; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 10770742 - 10770687
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||| |||||    
T  10770742 tgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattaca 10770687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 93 - 207
Target Start/End: Original strand, 34595124 - 34595253
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttac---------------acacgacacgtgtccgacaccagaacacg 177  Q
    |||||||||| || |||||||||||||||||||||||||||||| |||||| ||||               |||||||||||||| |||||| | ||||     
T  34595124 atgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcggacacgacacgtgtctgacaccgggacaca 34595223  T
Q  178 cctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||| |||||||||||||||||||||||    
T  34595224 cctaatccgaggagtgtccgtgcttcatag 34595253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 853927 - 853880
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtg 141  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||    
T  853927 tgacacgccgacacaactaataatttgaaaaaatcacataattaagtg 853880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 209
Target Start/End: Original strand, 7938107 - 7938221
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtg 193  Q
    ||||||||| || || |||||||||||||||||||| |||||| |||||| ||| |   | |  ||||||||||||   |||||||| || |||||||||    
T  7938107 tgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcg-gtgtccgacaccgagacacgcctgatccgaggagtg 7938205  T
Q  194 tccgtgcttcatagct 209  Q
    ||||||||||||||||    
T  7938206 tccgtgcttcatagct 7938221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 206
Target Start/End: Original strand, 9658935 - 9658998
Alignment:
Q  144 gttacacacgacacgtgtccgacaccagaacacgcctaatt-cgaggagtgtccgtgcttcata 206  Q
    |||| |||||||||||||| |||||| |||||||||||||| | ||||||||||||||||||||    
T  9658935 gttagacacgacacgtgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 31959166 - 31959268
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttacaca------cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 203  Q
    ||||||||||||||||||||||||||  |||||| |||||        ||||| |||||||||||| | |||| |||||| |||||||||||||||||||    
T  31959166 ctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcggcgacatgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttc 31959265  T
Q  204 ata 206  Q
    |||    
T  31959266 ata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 4878004 - 4878061
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| |||||||||| || ||||||||||| |||||||||||||||||||||||    
T  4878004 acacgacacatgtccgacac-aggacacgcctaatccgaggagtgtccgtgcttcatag 4878061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 8365506 - 8365448
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||  | ||||||||||| |||||||| ||||||||||||||    
T  8365506 acacgacacgtgtccgacactgggacacgcctaatccgaggagtctccgtgcttcatag 8365448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 8776966 - 8776908
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||||||||||   |||| |||||| |||||||||||||||||||||||    
T  8776966 acacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcatag 8776908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 17327648 - 17327590
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||| |||||  | ||||||||||| |||||||||||||||||||||||    
T  17327648 acacgacacgtgtctgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 17327590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 28152159 - 28152217
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||| | ||| ||||||| |||||||||| ||||||||||||    
T  28152159 acacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatag 28152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 28715356 - 28715414
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||| ||||||| | |||||||||||||||| ||||| ||||||||||||    
T  28715356 acacgacacgtgttcgacaccgggacacgcctaattcgagaagtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 7930368 - 7930413
Alignment:
Q  155 cacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgc 200  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||    
T  7930368 cacgtgtccgacaccaggacacgcctaattcgaggagtgttcgtgc 7930413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 31384991 - 31385048
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||||||| ||||| | ||||||||||| | ||||||||||||||||||||    
T  31384991 acacgacacgtgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 8777041 - 8776986
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || ||||||||||||||||||||||||| |||| |||||| |||||    
T  8777041 tgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattaca 8776986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 12696277 - 12696370
Alignment:
Q  55 atgaagcacgaatacggatatggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||| ||||||| | |||||| ||||| ||||| ||||||||| || || |||||||||||||||||| |||||||| |||||| |||||    
T  12696277 atgaagcacggatacggacacggacac-gacac-ggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattaca 12696370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 16766688 - 16766743
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  16766688 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 16766743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 16766769 - 16766828
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    |||| |||||||||||||||| | ||||||||||| ||| || |||||||||||||||||    
T  16766769 acacaacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcatagc 16766828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 16833299 - 16833354
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || ||||||||||||||||||||||||||| || |||||| |||||    
T  16833299 tgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattaca 16833354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 17841657 - 17841602
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  17841657 tgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattaca 17841602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 3209460 - 3209518
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||| |||||||||| | ||||||||||| ||||||||||  |||||||||||    
T  3209460 acacgacacgcgtccgacacccggacacgcctaatccgaggagtgtttgtgcttcatag 3209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 7801251 - 7801169
Alignment:
Q  68 acggatatggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||| |||||| || |||| ||| | ||||||| || |||||||||||||||||||||||||||||| || ||| |||||    
T  7801251 acggatacggacacggataccgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattaca 7801169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 10339112 - 10339054
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||  | |||||||||||  ||||||||||||||||||||||    
T  10339112 acacgacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcatag 10339054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 24645542 - 24645600
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||||  ||||| ||||| ||| ||||||| |||||||||||    
T  24645542 acacgacacgtgtccgacaccaagacacgtctaatccgaagagtgtctgtgcttcatag 24645600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Original strand, 31384924 - 31384966
Alignment:
Q  107 caactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||||||||||||||||||||| |||||| |||||    
T  31384924 caactaataatttgaaaaaatcacataattcagtgtaattaca 31384966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 1681751 - 1681804
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||| || |||||||||||||||||||||||| ||||| |||||| |||||    
T  1681751 acacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattaca 1681804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 7151419 - 7151452
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||||||||||||||||||||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgta 7151452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 172 - 209
Target Start/End: Complemental strand, 7723234 - 7723197
Alignment:
Q  172 aacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||| |||||||||||||||||||||||||    
T  7723234 aacacgcctaatccgaggagtgtccgtgcttcatagct 7723197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 17841587 - 17841530
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||||||| |||||||||||    ||||||||||| ||||||||||||||||||||||    
T  17841587 acacgacatgtgtccgacactgagacacgcctaatccgaggagtgtccgtgcttcata 17841530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 1700406 - 1700454
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||| |||||||||| ||||||||||| ||||||||||||| ||||||    
T  1700406 gtgtcggacaccagaatacgcctaattcaaggagtgtccgtgtttcata 1700454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 26553816 - 26553864
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  26553816 gtgtctgacatcagaacacgcctaattcgaggagtgtatgtgcttcata 26553864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 426582 - 426527
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || ||  |||||||||||||||||||||||||||| |||| |||||    
T  426582 tgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattaca 426527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 7977898 - 7977843
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || |||||||||||||||||| |||||||| |||||| |||||    
T  7977898 tgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattaca 7977843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 8365587 - 8365532
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || |||||||||||||||||| |||||||||||  ||||| |||||    
T  8365587 tgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattaca 8365532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 9025495 - 9025448
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 204  Q
    ||||||||||||| | ||||||||||| |||| |||||||||||||||    
T  9025495 cgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 16833364 - 16833427
Alignment:
Q  144 gttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| |||||||||| |||||||||||| |||| || ||| ||||||||||| || ||||||||    
T  16833364 gttagacacgacacgcgtccgacaccaggacacaccgaatccgaggagtgtctgtacttcatag 16833427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 149
Target Start/End: Original strand, 28715241 - 28715341
Alignment:
Q  53 ctatgaagcacgaatacggatatggacacagacaccggacatgacacg----ccaacccaactaataatttgaaaaaatcacataattaagtgtagttac 148  Q
    |||||||||||| ||||||||| |||||| ||||||||||| || |||    |  || |  |||||||||||||||||| |||||||| |||||| ||||    
T  28715241 ctatgaagcacggatacggatacggacacggacaccggacacgatacggacactgacacggctaataatttgaaaaaatgacataattcagtgtaattac 28715340  T
Q  149 a 149  Q
    |    
T  28715341 a 28715341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 32978897 - 32978842
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 204  Q
    ||||||||| ||||||||||| | ||||| ||||| | ||||||||||||||||||    
T  32978897 acacgacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 4118384 - 4118346
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattaca 4118346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 5970159 - 5970121
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  5970159 taataatttgaaaaaatcacataattcagtgtaattaca 5970121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 7248430 - 7248488
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| ||| |||||||||||| | ||||| | ||| |||||||||||||||||||||||    
T  7248430 acacaacatgtgtccgacaccgggacacgtcaaatccgaggagtgtccgtgcttcatag 7248488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 7625185 - 7625235
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||| |||||||| |||| | |||||||| ||||||||||||    
T  7625185 cgtgtccgacaccggaacacgcttaatccaaggagtgttcgtgcttcatag 7625235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 158 - 204
Target Start/End: Complemental strand, 8389457 - 8389411
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 204  Q
    |||||||||||| | |||| |||||| ||||||||||||||||||||    
T  8389457 gtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 93 - 143
Target Start/End: Complemental strand, 33001358 - 33001308
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||| || |  ||||||||||||||||||||||||||||| ||||    
T  33001358 atgacacgccgacactgctaataatttgaaaaaatcacataattaaatgta 33001308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 34073335 - 34073278
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||| ||| |||||||| | ||||  |||||||||||||||||||||||||||||    
T  34073335 acacgacatgtg-ccgacaccgggacacctctaattcgaggagtgtccgtgcttcatag 34073278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 205
Target Start/End: Original strand, 5569825 - 5569866
Alignment:
Q  164 gacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||| |||||||||||||  ||||||||||||||||||||    
T  5569825 gacacctgaacacgcctaatctgaggagtgtccgtgcttcat 5569866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 210
Target Start/End: Complemental strand, 5732508 - 5732471
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatagctc 210  Q
    ||||||||||| |||||||||||| |||||||||||||    
T  5732508 acacgcctaatccgaggagtgtccatgcttcatagctc 5732471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 7265661 - 7265612
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||| |  |||||||||||| |||||||||||||| ||||||    
T  7265661 tgacacgccaacaccgctaataatttgagaaaatcacataattcagtgta 7265612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 9107348 - 9107299
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||| | |||| |||||| ||||||||| |||||||||||||    
T  9107348 gtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 9107436 - 9107383
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||| || || |||||||||||||||||||||| |||| |||||| |||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattaca 9107383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 10842539 - 10842572
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||||||||||||||||||| ||||||    
T  10842539 ctaataatttgaaaaaatcacataatttagtgta 10842572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 24138433 - 24138466
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||||||||||| |||||||||||||    
T  24138433 ctaataatttgaaaaaatcatataattaagtgta 24138466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 25038058 - 25038029
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgc 178  Q
    ||||||||||||||||||||||||||||||    
T  25038058 acacgacacgtgtccgacaccagaacacgc 25038029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 403915 - 403883
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||||||||||||||||| ||||||    
T  403915 taataatttgaaaaaatcacataatttagtgta 403883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 5000613 - 5000557
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||| | ||||||||||| ||||| ||||| ||| |||||| ||||||||||    
T  5000613 acacgacacatatccgacaccaggacacgtctaatccgaagagtgttcgtgcttcat 5000557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 21424870 - 21424830
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataa 134  Q
    |||||||||||| |  |||||||||||||||||||||||||    
T  21424870 tgacacgccaacaccgctaataatttgaaaaaatcacataa 21424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 107 - 143
Target Start/End: Complemental strand, 34225864 - 34225828
Alignment:
Q  107 caactaataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  34225864 caactaataatttgaaaaaatcgcataattcagtgta 34225828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 8622 - 8564
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||| |||||||||||||  | |||||||||||||||||||||||||||||||||||    
T  8622 acacgatacgtgtccgacactggtacacgcctaattcgaggagtgtccgtgcttcatag 8564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 241666 - 241724
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||| | ||||||||||| |||| ||||||||||||||||||    
T  241666 acacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Original strand, 241585 - 241634
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||| || || ||||||||||| ||||||||||||||| ||||||    
T  241585 tgacacgccgacacagctaataatttggaaaaatcacataatttagtgta 241634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 27932296 - 27932354
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||| |||||||| ||||||||||||||||||||||  |||||||||||    
T  27932296 acacgacacgtgtcggacaccaggacacgcctaattcgaggagtgtttgtgcttcatag 27932354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 208
Target Start/End: Complemental strand, 21576809 - 21576684
Alignment:
Q  98 acgccaacccaactaataatttgaaaaaatcacataattaagtgtagttac---------------acacgacacgtgtccgacaccagaacacgcctaa 182  Q
    |||||||| || ||||||||||||||||||||||||||| |||||| ||||               |||||||||||||| |||||  | ||||||||||    
T  21576809 acgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcggacacgacacgtgtctgacactgggacacgcctaa 21576710  T
Q  183 ttcgaggagtgtccgtgcttcatagc 208  Q
    | ||||||||||||||||||||||||    
T  21576709 tccgaggagtgtccgtgcttcatagc 21576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 30098398 - 30098456
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||| |||||||| |||| |||||| |||||| ||||||||||||||||    
T  30098398 acacgacacgtgtcagacaccaggacacacctaatccgaggaatgtccgtgcttcatag 30098456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 42893421 - 42893479
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| |||||||||||||||||| |||||||||||  ||||||||||| ||||||||||    
T  42893421 acacaacacgtgtccgacaccaggacacgcctaatatgaggagtgtccatgcttcatag 42893479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 2436980 - 2437033
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctc 210  Q
    ||||||||||||||  ||||||||||| |||||||||| |||||||||||||||    
T  2436980 cgtgtccgacaccaagacacgcctaatccgaggagtgttcgtgcttcatagctc 2437033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 6326345 - 6326253
Alignment:
Q  114 taatttgaaaaaatcacataattaagtgtagttacacacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||| ||||| |||||||| |||||| |||||   | || | ||| |||||| |||||||||||||||||| ||||||||||||||||||    
T  6326345 taatttgagaaaattacataattcagtgtaattacaagtgtca-gcgtcggacaccggaacacgcctaattcgagaagtgtccgtgcttcatag 6326253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 14873588 - 14873641
Alignment:
Q  154 acacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||| ||||| | ||||||||||| |||||||||||||||||||||||    
T  14873588 acacgtgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 21191054 - 21190998
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||| ||||||||||||| || | ||||||||||| |||||||||||||||||||||    
T  21191054 acacaacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 151 - 207
Target Start/End: Complemental strand, 32766928 - 32766872
Alignment:
Q  151 acgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||| | ||| |||||  ||||||||||||||||||||||    
T  32766928 acgacacgtgtccgacaccaggatacgtctaatctgaggagtgtccgtgcttcatag 32766872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 43001866 - 43001922
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||||||||  ||||| | ||||||||||| |||||||||||||||||||||    
T  43001866 acacgacacgtgtcaaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 6247613 - 6247668
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  6247613 tgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattaca 6247668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 14674260 - 14674315
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  14674260 tgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattaca 14674315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 33178016 - 33178071
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || ||||||||||||| |||||||||||||||| |||||| |||||    
T  33178016 tgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattaca 33178071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 39268596 - 39268541
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttca 204  Q
    |||||||| |||||||||||  | ||||||||||| ||||||||||||||||||||    
T  39268596 acacgacatgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttca 39268541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Original strand, 8419991 - 8420073
Alignment:
Q  68 acggatatggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||| |||||| ||||||||||| ||||||||| ||  | |||||||||||||||||| |||||||| | |||| |||||    
T  8419991 acggatacggacacggacaccggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattaca 8420073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 24906286 - 24906252
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||||||||||||||||||||||||    
T  24906286 acacgcctaattcgaggagtgtccgtgcttcatag 24906252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 203
Target Start/End: Original strand, 30183621 - 30183675
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 203  Q
    ||||||||||||||||||||  | |||||||||||||||| |||||| |||||||    
T  30183621 acacgacacgtgtccgacactgggacacgcctaattcgagaagtgtctgtgcttc 30183675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 31084389 - 31084447
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||  | ||| ||||||| ||||||||||||||| |||||||    
T  31084389 acacgacacgtgtccgacactgggacatgcctaatccgaggagtgtccgtggttcatag 31084447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 39698613 - 39698671
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||| || |||||||||   ||||||||||| |||||||||||||||||||||||    
T  39698613 acacgacatgtatccgacaccgagacacgcctaatccgaggagtgtccgtgcttcatag 39698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 43564942 - 43565000
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||| ||||||||| || | ||||||||||| |||| ||||||||||||||||||    
T  43564942 acacgacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 19552611 - 19552562
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||| || ||  |||||||||||||||||||||||||||||||||    
T  19552611 tgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta 19552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 199
Target Start/End: Original strand, 17088358 - 17088402
Alignment:
Q  155 cacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtg 199  Q
    ||||||||||||||| | ||||||||||| |||||||||||||||    
T  17088358 cacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtg 17088402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 19820376 - 19820328
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| | |||||||||||  ||||||||||||||||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcatag 19820328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 21522822 - 21522882
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||||||| |||| | ||||||||||| | | |||||||||||| ||||||||    
T  21522822 acacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatagct 21522882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 21533388 - 21533448
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||||||| |||| | ||||||||||| | | |||||||||||| ||||||||    
T  21533388 acacgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcatagct 21533448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 207
Target Start/End: Original strand, 35017110 - 35017162
Alignment:
Q  155 cacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||| | | ||||||||||| |||||||||||||||||||||||    
T  35017110 cacgtgtccaacatcgggacacgcctaatccgaggagtgtccgtgcttcatag 35017162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 7677777 - 7677836
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||| ||| ||||||||||| | ||||||||||| ||||||| ||| ||||||||||||    
T  7677777 acacgtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcatagc 7677836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 21191108 - 21191069
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  21191108 ctaataatttgaaaaaatcacataattcagtgtaattaca 21191069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Complemental strand, 21194121 - 21194062
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    ||||||||| |||| |||||| |  |||||||||| |||||||||||||||||| |||||    
T  21194121 acacgacacatgtcagacaccggggcacgcctaatccgaggagtgtccgtgctttatagc 21194062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 24906369 - 24906314
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||| ||  ||||||||||||||||| |||||||| |||||| |||||    
T  24906369 tgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattaca 24906314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 31084314 - 31084369
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || ||||||||||||||||||||||||||| | |||| |||||    
T  31084314 tgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattaca 31084369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 39698548 - 39698587
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  39698548 ctaataatttgaaaaaatcacataattcagtgtaattaca 39698587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 41558638 - 41558579
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcagaagt 216  Q
    |||| |||||||||| | |||||||||| || ||||||| ||||||||||| ||||||||    
T  41558638 cgtgaccgacaccaggatacgcctaatttgaagagtgtcagtgcttcatagatcagaagt 41558579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 10298635 - 10298669
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| |||||||||||||||||||||||    
T  10298635 acacgcctaatccgaggagtgtccgtgcttcatag 10298669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 15382546 - 15382592
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtc 195  Q
    ||||||||| ||||||||||| | ||||||||||| |||||||||||    
T  15382546 acacgacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 16304424 - 16304366
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||| ||||||||   ||||| ||||| |||||| ||||||||||||||||    
T  16304424 acacgacacgtgcccgacaccgagacacgtctaatccgaggaatgtccgtgcttcatag 16304366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 17123132 - 17123166
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| |||||||||||||||||||||||    
T  17123132 acacgcctaatccgaggagtgtccgtgcttcatag 17123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 155 - 209
Target Start/End: Complemental strand, 17593715 - 17593661
Alignment:
Q  155 cacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||| ||||| | |||||| |||| |||||||||||||| ||||||||||    
T  17593715 cacgtgtccaacaccgggacacgcttaatccgaggagtgtccgtacttcatagct 17593661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 207
Target Start/End: Complemental strand, 22423798 - 22423764
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| |||||||||||||||||||||||    
T  22423798 acacgcctaatccgaggagtgtccgtgcttcatag 22423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 36642749 - 36642696
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttc 203  Q
    ||||||||||||||||||||  || ||||||||||| |||||||||| |||||||    
T  36642749 acacgacacgtgtccgacacggga-cacgcctaattggaggagtgtcggtgcttc 36642696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 94 - 136
Target Start/End: Original strand, 41995462 - 41995504
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataatt 136  Q
    ||||||||| || |||||||||||| |||||||||||||||||    
T  41995462 tgacacgccgacacaactaataattcgaaaaaatcacataatt 41995504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 204
Target Start/End: Complemental strand, 18586265 - 18586232
Alignment:
Q  171 gaacacgcctaattcgaggagtgtccgtgcttca 204  Q
    |||||| |||||||||||||||||||||||||||    
T  18586265 gaacacacctaattcgaggagtgtccgtgcttca 18586232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 21542102 - 21542159
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||||||||||||| | ||||||| ||| | |||| ||||||||| |||||    
T  21542102 acacgacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 136
Target Start/End: Original strand, 40131625 - 40131654
Alignment:
Q  107 caactaataatttgaaaaaatcacataatt 136  Q
    ||||||||||||||||||||||||||||||    
T  40131625 caactaataatttgaaaaaatcacataatt 40131654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 111 - 143
Target Start/End: Complemental strand, 13287450 - 13287418
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||||||||||||||||||||| ||||||    
T  13287450 taataatttgaaaaaatcacataattcagtgta 13287418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 23015982 - 23015926
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||| ||||||||||   | ||||||||||| ||||||||||||| |||||||    
T  23015982 acacgacatgtgtccgacattgggacacgcctaatccgaggagtgtccgagcttcat 23015926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 159 - 207
Target Start/End: Complemental strand, 38464361 - 38464313
Alignment:
Q  159 tgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| | |||| |||||| ||||||||||| |||||||||||    
T  38464361 tgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcatag 38464313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 26769583 - 26769641
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  26769583 acacgacacgtgtccgacactgggacacgcctaatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 2438717 - 2438661
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||| ||||||||||| | ||||||||||| |||||||||||||||||||||    
T  2438717 acacgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 35056940 - 35057000
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||||||||||||   ||||||||||||  ||||||||||||||||||||||||    
T  35056940 acacgacacgtgtccgacacggaaacacgcctaatctgaggagtgtccgtgcttcatagct 35057000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 94 - 207
Target Start/End: Complemental strand, 18841081 - 18840953
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttac---------------acacgacacgtgtccgacaccagaacacgc 178  Q
    ||||||||  || ||||||||||||||||||||| ||||||||||||||| ||||               ||||||||| ||||||||||| | |||| |    
T  18841081 tgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtcagacacgacacatgtccgacaccgggacacac 18840982  T
Q  179 ctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||| |||||||||||||||||||||||    
T  18840981 ctaatccgaggagtgtccgtgcttcatag 18840953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 157 - 207
Target Start/End: Original strand, 37419823 - 37419873
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||| | ||||||||||| |||||||||||||||||||||||    
T  37419823 cgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 37559042 - 37559096
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||| | |||||| |||| |||||||||||||||||||||||    
T  37559042 gacacgtgtccgacaccggtacacgcttaatccgaggagtgtccgtgcttcatag 37559096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 38117157 - 38117099
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| |||||||||||||||| | ||||||||||| ||||| |||||||||||||||||    
T  38117157 acacaacacgtgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcatag 38117099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 28596530 - 28596587
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||||||||||||||  | |||| |||||| ||||||||||||||||||||||    
T  28596530 acacgacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcata 28596587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 44860392 - 44860449
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    |||||||| |||||||||| | | |||| |||||||||||||||||||||||||||||    
T  44860392 acacgacatgtgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 42511380 - 42511320
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||| |||||||||||||||  | ||||| ||||| |||||||||||||||||||||||||    
T  42511380 acacaacacgtgtccgacacagggacacggctaatccgaggagtgtccgtgcttcatagct 42511320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 34006980 - 34006930
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||| |||||| |||||| |||||||| |||||||||||||||||||||    
T  34006980 cgtgtctgacaccggaacacacctaattcaaggagtgtccgtgcttcatag 34006930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 34993980 - 34993922
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||| |||||||||||  | ||||||||||||| |||||||| ||||||||||||    
T  34993980 acacgacatgtgtccgacactgggacacgcctaattcaaggagtgttcgtgcttcatag 34993922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 10535734 - 10535685
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||| |||||||| ||||||||||| |||||||||| ||||||||||||    
T  10535734 gtgtctgacaccaggacacgcctaatccgaggagtgttcgtgcttcatag 10535685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 149
Target Start/End: Original strand, 15657857 - 15657910
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||| || |||||||||||||| ||||||||||||||| |||||| |||||    
T  15657857 acacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattaca 15657910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 93 - 149
Target Start/End: Complemental strand, 19536467 - 19536410
Alignment:
Q  93 atgacacgccaacccaactaataatttgaa-aaaatcacataattaagtgtagttaca 149  Q
    |||||||||| || |||||||||||||||| |||||||||||||| |||||| |||||    
T  19536467 atgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattaca 19536410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 149
Target Start/End: Complemental strand, 21374811 - 21374712
Alignment:
Q  51 aactatgaagcacgaatacggatatggacacag-acaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttac 148  Q
    |||||||||||||| ||||||| | |||||| | |||| ||||| | ||||||| || || |||||||||||||||||| |||||||| |||||| ||||    
T  21374811 aactatgaagcacggatacggacacggacaccggacac-ggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattac 21374713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 30335411 - 30335463
Alignment:
Q  97 cacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||| || ||||||||||||||||||||| |||||||| |||||| |||||    
T  30335411 cacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattaca 30335463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 30717517 - 30717457
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||||| ||||||  | | ||||||||| | |||||||||||||||||||||||    
T  30717517 acacgacacgtgttcgacactgggatacgcctaatccaaggagtgtccgtgcttcatagct 30717457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 35449568 - 35449627
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacg--cctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||| |||||||||||||||||||   ||||| ||||||||||| ||||||||||    
T  35449568 acacgacacatgtccgacaccagaacacgtctctaatccgaggagtgtctgtgcttcata 35449627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 30717582 - 30717543
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||||||| |||||| |||||    
T  30717582 ctaataatttgaaaaaatcacataattcagtgtaattaca 30717543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 11223850 - 11223793
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| |||| |||||| | |||||||||||  ||||||||||||||||||||||    
T  11223850 acacgacac-tgtctgacaccgggacacgcctaatctgaggagtgtccgtgcttcatag 11223793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 12940990 - 12940948
Alignment:
Q  107 caactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||||||||||||||||| |||||| |||||| |||||    
T  12940990 caactaataatttgaaaaaatcatataattcagtgtaattaca 12940948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 15972934 - 15972992
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||||||| || | |||| |||||| ||| || ||||||||||||||||    
T  15972934 acacgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcatag 15972992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 20539783 - 20539687
Alignment:
Q  53 ctatgaagcacgaatacggata-tggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||| ||||||| | ||||||| ||||| ||||| ||||||| | || || |||||||||||||||||||| |||||| |||||| |||||    
T  20539783 ctatgaagcacggatacggacactggacac-gacac-ggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattaca 20539687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 24009356 - 24009414
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||| |||||  | |||||||| || | |||||||||||||||||||||    
T  24009356 acacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 24009414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 28412422 - 28412476
Alignment:
Q  153 gacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||  | ||||| ||||||||||||| ||| |||||||||||    
T  28412422 gacacgtgtccgacactgggacacggctaattcgaggagcgtcagtgcttcatag 28412476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 149
Target Start/End: Complemental strand, 30404901 - 30404863
Alignment:
Q  111 taataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||||||||||||||||| |||||| |||||    
T  30404901 taataatttgaaaaaatcacataattcagtgtaattaca 30404863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 34784969 - 34784911
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| |||| |||||  | |||||||| |||||||||||||| |||||||||||    
T  34784969 acacgacacctgtctgacacggggacacgccttattcgaggagtgtctgtgcttcatag 34784911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 143
Target Start/End: Complemental strand, 12668491 - 12668442
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||| ||  |||||||||||||||||||| |||||||| ||||||    
T  12668491 tgacacgccgacataactaataatttgaaaaaatgacataattcagtgta 12668442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 14996212 - 14996171
Alignment:
Q  154 acacgtgtccgacaccagaacacgcctaattcgaggagtgtc 195  Q
    ||||||||| |||||| ||||||||||||| |||||||||||    
T  14996212 acacgtgtctgacaccggaacacgcctaatccgaggagtgtc 14996171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 152 - 205
Target Start/End: Original strand, 15657939 - 15657992
Alignment:
Q  152 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||||||||| || | ||||||||| | |||||||||||| ||||||||    
T  15657939 cgacacgtgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 15909619 - 15909570
Alignment:
Q  158 gtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||  | ||||||||||||||| |||||| ||||||||||||    
T  15909619 gtgtccgacacagggacacgcctaattcgaagagtgttcgtgcttcatag 15909570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 21782801 - 21782744
Alignment:
Q  150 cacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||||||||||||| ||||| | ||||| |||||  | ||||||||||||||||||||    
T  21782801 cacgacacgtgtccaacaccgggacacgtctaatctgtggagtgtccgtgcttcatag 21782744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 143
Target Start/End: Original strand, 28677916 - 28677949
Alignment:
Q  110 ctaataatttgaaaaaatcacataattaagtgta 143  Q
    ||||||||||||||||||||||||||| ||||||    
T  28677916 ctaataatttgaaaaaatcacataattcagtgta 28677949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 152 - 208
Target Start/End: Complemental strand, 12601196 - 12601140
Alignment:
Q  152 cgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagc 208  Q
    |||| ||||||| ||||||  |||| |||||||||||||||||| || |||||||||    
T  12601196 cgacgcgtgtccaacaccaagacacacctaattcgaggagtgtctgtacttcatagc 12601140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 19580283 - 19580223
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||| |||||||||| |||||| |||||  ||||| ||| ||||||| |||||||||||||    
T  19580283 acacaacacgtgtccaacaccaaaacacatctaatccgaagagtgtctgtgcttcatagct 19580223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 19942326 - 19942382
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||| || ||||| |||||| | ||||||||||| |||||||||||| ||||||||    
T  19942326 acacggcatgtgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 27084330 - 27084390
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||||||| |||||   |||||||||||  ||||||||||  ||||||||||||    
T  27084330 acacgacacgtgtccaacaccgagacacgcctaatcggaggagtgtctctgcttcatagct 27084390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 36756331 - 36756275
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||| |||| |||||||||||  |||||||||||| | ||||||||| |||||||||    
T  36756331 acacaacacatgtccgacaccgcaacacgcctaatcctaggagtgtctgtgcttcat 36756275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Complemental strand, 225247 - 225199
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  225247 cgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 207
Target Start/End: Original strand, 14522 - 14646
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttac------------acacgacacgtgtccgacaccagaacacgcctaa 182  Q
    |||||||| || |||||||||||||||||||||||||||||| |||||| ||||            |||||||||||||||||||||   ||||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtggtgtcggacacgacacgtgtccgacaccgagacacgcctaa 14621  T
Q  183 ttcgaggagtgtccgtgcttcatag 207  Q
    |   |||||||| ||||||||||||    
T  14622 tcgaaggagtgtacgtgcttcatag 14646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 4879 - 4821
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  4879 acacgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcatag 4821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 460 - 398
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctca 211  Q
    ||||||| ||||||||||||| | |||| |||||| |||||||||||||||||||||| ||||    
T  460 acacgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcataactca 398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 8859 - 8924
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagctcagaa 214  Q
    |||||||||||||||||||||   |||||||||||  ||||||| |||||||||||||| ||||||    
T  8859 acacgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcatagatcagaa 8924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 92883 - 92940
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcata 206  Q
    ||||||||| |||| |||||| | ||||||||||| ||||||||||||||||||||||    
T  92883 acacgacacatgtcggacacctggacacgcctaatccgaggagtgtccgtgcttcata 92940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 20162 - 20218
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  20162 atgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 20218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 70339 - 70399
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    ||||||||||||||||||||||| ||| ||||||| ||| |||||| ||||||||| ||||    
T  70339 acacgacacgtgtccgacaccaggacatgcctaatccgatgagtgttcgtgcttcaaagct 70399  T

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Target: scaffold0103 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 51802 - 51857
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    ||||||||| || || ||||||||||||||||||||||||||| |||||| |||||    
T  51802 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattaca 51857  T

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Target: scaffold0380 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 8662 - 8720
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||||||||  | | ||||||||| | |||||||||||||||||||||    
T  8662 acacgacacgtgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcatag 8720  T

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Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 71797 - 71855
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| |||||||||||||||| | ||||| ||||| ||||||||||| |||||||||||    
T  71797 acacaacacgtgtccgacaccgggacacgactaatccgaggagtgtcggtgcttcatag 71855  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 17804 - 17762
Alignment:
Q  107 caactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||||||||||||||||||||||| |||||| |||||    
T  17804 caactaataatttgaaaaaatcacataatttagtgtaattaca 17762  T

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Target: scaffold0227 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 7378 - 7330
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattaagtgta 143  Q
    |||||||| || |||||||||||||| ||||||||||||||| ||||||    
T  7378 gacacgccgacacaactaataatttggaaaaatcacataatttagtgta 7330  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 46672 - 46728
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||||| || ||  |||||||||||||||||||||||||| |||||| |||||    
T  46672 atgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattaca 46728  T

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Target: scaffold0027; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 46742 - 46776
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| |||||||||||||||||||||||    
T  46742 acacgcctaatccgaggagtgtccgtgcttcatag 46776  T

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Target: scaffold0018 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 178887 - 178831
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatca-cataattaagtgtagttaca 149  Q
    ||||||||| || ||||||||||||||||||||||| ||||||| |||||| |||||    
T  178887 tgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattaca 178831  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 263359 - 263303
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    ||||||||||||| ||| ||||  ||||||||||| ||||||||||||||| |||||    
T  263359 acacgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

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Target: scaffold0306 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 13391 - 13438
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtg 141  Q
    ||||||||| || ||||||||||||||| |||||||||||||| ||||    
T  13391 tgacacgccgacacaactaataatttgagaaaatcacataattcagtg 13438  T

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Target: scaffold0306; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 13467 - 13523
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||||| ||| ||||| || |||| |||||| | |||||||||||||||||||    
T  13467 acacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

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Target: scaffold0152 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 141
Target Start/End: Complemental strand, 21936 - 21889
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattaagtg 141  Q
    ||||||||| || ||||||||||||||| |||||||||||||| ||||    
T  21936 tgacacgccgacacaactaataatttgagaaaatcacataattcagtg 21889  T

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Target: scaffold0152; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 21860 - 21804
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcat 205  Q
    |||||||||| ||| ||||| || |||| |||||| | |||||||||||||||||||    
T  21860 acacgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 200
Target Start/End: Original strand, 188473 - 188512
Alignment:
Q  161 tccgacaccagaacacgcctaattcgaggagtgtccgtgc 200  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  188473 tccgacaccaggacacgcctaatccgaggagtgtccgtgc 188512  T

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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 3393 - 3427
Alignment:
Q  173 acacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||| |||||||||||||||||||||||    
T  3393 acacgcctaatccgaggagtgtccgtgcttcatag 3427  T

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Target: scaffold0136 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 3836 - 3778
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||| |   ||||||||||| |||||||||||| ||||||||||    
T  3836 acacgacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcatag 3778  T

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Target: scaffold0066 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 33430 - 33376
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattaagtgtagttaca 149  Q
    |||||||| || || |||||||||||||||||| |||||||| |||||| |||||    
T  33430 gacacgccgacacagctaataatttgaaaaaataacataattcagtgtaattaca 33376  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 90904 - 90962
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    |||| ||||||||||||||||| |||||||||||| | | ||||||  |||||||||||    
T  90904 acacaacacgtgtccgacaccaaaacacgcctaatccaatgagtgtatgtgcttcatag 90962  T

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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 3036 - 2978
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||| ||||||||||   ||||||||||||  | ||||||||||||||||||||    
T  3036 acacgacacatgtccgacactgaaacacgcctaatatggggagtgtccgtgcttcatag 2978  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 207
Target Start/End: Complemental strand, 135313 - 135263
Alignment:
Q  157 cgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatag 207  Q
    ||||||||||||||| |||||||||||  |||| |||| ||||||||||||    
T  135313 cgtgtccgacaccaggacacgcctaatctgaggcgtgttcgtgcttcatag 135263  T

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Target: scaffold0512 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 149 - 209
Target Start/End: Complemental strand, 5034 - 4974
Alignment:
Q  149 acacgacacgtgtccgacaccagaacacgcctaattcgaggagtgtccgtgcttcatagct 209  Q
    |||||||||||||||||||     ||| ||||||| ||||||||||| |||||||||||||    
T  5034 acacgacacgtgtccgacattgagacatgcctaatccgaggagtgtctgtgcttcatagct 4974  T

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Target: scaffold0122 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 95 - 135
Target Start/End: Original strand, 8002 - 8042
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataat 135  Q
    |||||||| || ||||||||||||||||||||||| |||||    
T  8002 gacacgccgacacaactaataatttgaaaaaatcatataat 8042  T

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