View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4452_low_14 (Length: 291)
Name: NF4452_low_14
Description: NF4452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4452_low_14 |
 |  |
|
| [»] chr1 (3 HSPs) |
 |  |
|
| [»] scaffold0005 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 147; Significance: 2e-77; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 11 - 291
Target Start/End: Original strand, 11054038 - 11054319
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||||| ||| ||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||||| |||||||||||||||||||| || |
|
|
| T |
11054038 |
atcaccaatttcttcacgaatatattttctcaccctactagaaagaatttacaagagctctttttgaatttgatgttaagtatatttgcaattttctaga |
11054137 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaag-ttttaacaactcaagaaaattaccttgatttttctgatttcatttgtct |
209 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||||| |||||| | | |
|
|
| T |
11054138 |
gcatttttcaacacaacttttgcaacttcatcattgtaggatgctaaaagtttttaacaattcaaaaaaattaccttaatttttctgacctcatttcttt |
11054237 |
T |
 |
| Q |
210 |
gtctccaactaaactcaac-gagagagtttgtgacaaagaaggaaagttactgttacaagctaatataacatatctaaattat |
291 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||| |||||||||| ||| |||||| |||||||||| |||||||||||| |
|
|
| T |
11054238 |
gtctccaactaaactcaacacaga-agtttgtgaacaagaaggaaaactacgattacaaactaatataacgtatctaaattat |
11054319 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 27129785 - 27129606
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||||| ||| ||||||||||||||||||||| ||||||||||||| | ||||||| |||||||||| ||||||||||||||||||||| || |
|
|
| T |
27129785 |
atcaccaatttcttcacgaatatgttttctcaccctactagaaagaatttgcaatatctctttt-gaatttgatgtgaagtatatttgcaattttctgga |
27129687 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattt |
191 |
Q |
| |
|
| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
27129686 |
gaatttttcaacacaacttttgcaacttcatcattgtagaatgctaaaagttttaacaattcaagaaaattaccttgattt |
27129606 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 191
Target Start/End: Complemental strand, 25535773 - 25535598
Alignment:
| Q |
16 |
caatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttgagcatt |
115 |
Q |
| |
|
|||||||| || |||||||||| | |||||| | ||||||||||||||| || ||||||||||||||| |||||||| ||||| |||||| ||||||| |
|
|
| T |
25535773 |
caatttcttcatgaatatgttttttgaccctagtagaaagaatttgcaagagctgtttttgaatttgatgtgaagtatacttgcatttttctagagcatt |
25535674 |
T |
 |
| Q |
116 |
ttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattt |
191 |
Q |
| |
|
|| ||||||||| || | |||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
25535673 |
ttccaacacaactatttccacttcatcattgtaagattctaaaagttttaacaattcaagaaaattaccttgattt |
25535598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 33362145 - 33361965
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||||| ||| ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||| ||||||||||||||||||||| || |
|
|
| T |
33362145 |
atcaccaatttcttcacgaatatgttttctcaccctactagaaagaatttgcaatatctctttttggatttgatgcgaagtatatttgcaattttctgga |
33362046 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattt |
191 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
33362045 |
gcatttttcaacacaactttttcaacttcatcattgtaggatgctaaaagttttaacaattcaagaaaattaccttgattt |
33361965 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 129; Significance: 8e-67; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 31420505 - 31420325
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||||| ||| ||||||||||||||||||||| |||||||||| || | ||||||||| |||||||| ||||||||||||||||||||| || |
|
|
| T |
31420505 |
atcaccaatttcttcacgaatatgttttctcaccctactagaaagaatttgtaatatctctttttggatttgatgtgaagtatatttgcaattttctgga |
31420406 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattt |
191 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31420405 |
gcatttttcaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaattcaagaaaattaccttgattt |
31420325 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 41595248 - 41595085
Alignment:
| Q |
30 |
atatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttgagcattttttaacacaactt |
129 |
Q |
| |
|
||||||||| |||| ||||| |||||||| ||||| ||||||||||| ||||||| |||||||||| | ||| | | ||||||| || |||||||||| |
|
|
| T |
41595248 |
atatgttttttcactctactagaaagaattgccaagagctctttttgaacttgatggcaagtatattttccattctttggagcattattcaacacaactt |
41595149 |
T |
 |
| Q |
130 |
ttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattttt |
193 |
Q |
| |
|
||||||||||||||| || || || |||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
41595148 |
gtgcaacttcatcattataagaggccaaaagttttagcaactcaagaaaattaccttggttttt |
41595085 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 129; Significance: 8e-67; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 40924182 - 40924002
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||||| ||| ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||| |||||||||||||| |||||| || |
|
|
| T |
40924182 |
atcaccaatttcttcacgaatatgttttctcaccctactagaaagaatttgcaatatctctttttggatttgatgtgaagtatatttgcatttttctaga |
40924083 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattt |
191 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
40924082 |
gcatttttcaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaattcaagaaaattaccttgattt |
40924002 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 2735136 - 2734956
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||||| ||| ||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||| |||||||| ||||| |||||| || |
|
|
| T |
2735136 |
atcaccaatttcttcacgaatatgttttctcaccctactagaaagaatttgcaatatctctttttggatttgatgtgaagtataattgcatttttctgga |
2735037 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattt |
191 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2735036 |
gcatttttcaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaattcaagaaaattaccttgattt |
2734956 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 22511165 - 22511347
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| ||||||| |||||||||||||| |||| ||||| |||||||| ||||| ||||||||||| ||||||| |||||||||| | ||| | | || |
|
|
| T |
22511165 |
atcaccaatttcctcacaaatatgttttttcactctactagaaagaattgccaagagctctttttgaacttgatggcaagtatattttccattatttgga |
22511264 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattttt |
193 |
Q |
| |
|
||||| || |||||||||| ||||||||||||||| || || || |||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
22511265 |
gcattattcaacacaacttgtgcaacttcatcattataagaggccaaaagttttagcaactcaagaaaattaccttggttttt |
22511347 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 148
Target Start/End: Complemental strand, 43946256 - 43946119
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||| | ||| ||||| |||||| |||||| |||||||| ||||||||| |||||||||||||||||| |||||||||||| | |||||| | |
|
|
| T |
43946256 |
atcaccaattttttcacgaatatattttctaaccctattgaaaagattttgcaagagctctttttgaatttgatgtgaagtatatttgtatttttctgaa |
43946157 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgta |
148 |
Q |
| |
|
|||||||| |||| ||||||| |||||||||||||||| |
|
|
| T |
43946156 |
gcatttttcaacataacttttacaacttcatcattgta |
43946119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0005 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0005
Description:
Target: scaffold0005; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 41007 - 40827
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||||| ||| ||||||||||||||||||||| |||||||||| || | ||||||||| |||||||| |||||||||||||| |||||| || |
|
|
| T |
41007 |
atcaccaatttcttcacgaatatgttttctcaccctactagaaagaatttgaaatatctctttttggatttgatgtgaagtatatttgcatttttctgga |
40908 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattt |
191 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
40907 |
gcatttttcaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaattcaagaaaattaccttgattt |
40827 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 121; Significance: 5e-62; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 11 - 191
Target Start/End: Original strand, 14798721 - 14798900
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||||| ||| ||||||||||||||||||||| |||||||||| || | ||||||||| |||||||| |||||||||||||| |||||| || |
|
|
| T |
14798721 |
atcaccaatttcttcacgaatatgttttctcaccctactagaaagaatttgtaatatctctttttggatttgatgtgaagtatatttgcatttttctgga |
14798820 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattt |
191 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14798821 |
gcatttttcaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaa-tcaagaaaattaccttgattt |
14798900 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 193
Target Start/End: Original strand, 18839225 - 18839378
Alignment:
| Q |
40 |
tcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttgagcattttttaacacaacttttgcaacttc |
139 |
Q |
| |
|
|||||||||| | |||||||| || | |||||||||||||||||| |||||||| |||||||| ||| ||| ||||| ||||||| |||||||||||| |
|
|
| T |
18839225 |
tcaccctactatacagaatttgtaaaaactctttttgaatttgatgtgaagtatacttgcaattatctggaggattttccaacacaaattttgcaacttc |
18839324 |
T |
 |
| Q |
140 |
atcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattttt |
193 |
Q |
| |
|
|| |||||| |||||||| |||||||||||||| |||||||| ||||||||||| |
|
|
| T |
18839325 |
attattgtaagatgctaagagttttaacaactcgagaaaattgccttgattttt |
18839378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 113; Significance: 3e-57; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 11 - 191
Target Start/End: Original strand, 22271901 - 22272080
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||||| ||||||||||||| | ||||||||| |||||||| |||||||| ||||| |||||| || |
|
|
| T |
22271901 |
atcaccaatttcttcacaaatatgttttctcaccctactagaaagaatttgcaatatctctttttggatttgatgtgaagtataattgcatttttctgga |
22272000 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattt |
191 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
22272001 |
gcatttttcaacacaactttt-aaacttcatcattgtaggatgctaaaagttttaacaattcaagataattaccttgattt |
22272080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 11 - 193
Target Start/End: Original strand, 23122572 - 23122754
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| ||||||| ||| |||||||||| |||| ||||| ||||||||| ||||| ||||||||||| ||||||| |||||||||| | ||| | | || |
|
|
| T |
23122572 |
atcaccaatttcctcacgaatatgttttttcactctactagaaagaatttccaagagctctttttgaacttgatggcaagtatattttccattctttgga |
23122671 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattttt |
193 |
Q |
| |
|
||||| || |||||||||| ||||||||||||||| || || || |||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
23122672 |
gcattattcaacacaacttgtgcaacttcatcattataagaggccaaaagttttagcaactcaagaaaattaccttggttttt |
23122754 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 14008099 - 14007936
Alignment:
| Q |
30 |
atatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttgagcattttttaacacaactt |
129 |
Q |
| |
|
||||||||| |||| ||||| |||||||| ||||| ||||||||||| ||||||| |||||||||| | ||| | | ||||||| || |||||||||| |
|
|
| T |
14008099 |
atatgttttttcactctactagaaagaattgccaagagctctttttgaacttgatggcaagtatattttccattctttggagcattattcaacacaactt |
14008000 |
T |
 |
| Q |
130 |
ttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattttt |
193 |
Q |
| |
|
||||||||||||||| || || || |||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
14007999 |
gtgcaacttcatcattataagaggccaaaagttttagcaactcaagaaaattaccttggttttt |
14007936 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 109; Significance: 7e-55; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 11 - 191
Target Start/End: Complemental strand, 5087234 - 5087054
Alignment:
| Q |
11 |
atcatcaatttctccacaaatatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttga |
110 |
Q |
| |
|
|||| |||||||| ||| ||||||||||| ||||||||| ||||||||||||| | |||||||||||||||||| |||||||| ||||| |||||| || |
|
|
| T |
5087234 |
atcaccaatttcttcacgaatatgttttcccaccctactagaaagaatttgcaaaagctctttttgaatttgatgtgaagtatacttgcatttttctgga |
5087135 |
T |
 |
| Q |
111 |
gcattttttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattt |
191 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
5087134 |
gcattttccaacacaacttttgcaacttcatcattgtaagatgctaaaagttttagcagttcaagaaaattaccttgattt |
5087054 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 30 - 193
Target Start/End: Complemental strand, 43523855 - 43523692
Alignment:
| Q |
30 |
atatgttttctcaccctactgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttgagcattttttaacacaactt |
129 |
Q |
| |
|
||||||||| |||| ||||| |||||||| ||||| ||||||||||| ||||||| |||||||||| ||| | | ||||||| || |||||||||| |
|
|
| T |
43523855 |
atatgttttttcactctactagaaagaattgccaagagctctttttgaacttgatggcaagtatatttttcattctttggagcattattcaacacaactt |
43523756 |
T |
 |
| Q |
130 |
ttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattaccttgattttt |
193 |
Q |
| |
|
||||||||||||||| || || || |||||||||| ||||||||||||||||||||| ||||| |
|
|
| T |
43523755 |
gtgcaacttcatcattataagaggccaaaagttttagcaactcaagaaaattaccttggttttt |
43523692 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 99; Significance: 7e-49; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 19 - 185
Target Start/End: Complemental strand, 9303377 - 9303214
Alignment:
| Q |
19 |
tttctccacaaatatgttttctcaccct-actgaaaagaatttgcaagacctctttttgaatttgatgggaagtatatttgcaattttcttgagcatttt |
117 |
Q |
| |
|
||||| ||| ||| |||||||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| | | ||||| |
|
|
| T |
9303377 |
tttcttcacgaatttgttttctcacccttactggaaagaatttgcaa----tctttttgaatttgatgtgaagtatatttgcaattttctggtgtatttt |
9303282 |
T |
 |
| Q |
118 |
ttaacacaacttttgcaacttcatcattgtaggatgctaaaagttttaacaactcaagaaaattacct |
185 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
9303281 |
tcaacacaacttttgcaacttcatcattgtaggattctaaaagttttaacaattcaagaaaattacct |
9303214 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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