View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4452_low_23 (Length: 237)

Name: NF4452_low_23
Description: NF4452
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4452_low_23
NF4452_low_23
[»] chr4 (36 HSPs)
chr4 (1-215)||(32273473-32273687)
chr4 (110-216)||(3947712-3947818)
chr4 (88-177)||(12895101-12895190)
chr4 (93-216)||(23292937-23293055)
chr4 (110-216)||(28964199-28964300)
chr4 (94-214)||(19482659-19482785)
chr4 (77-152)||(11596362-11596438)
chr4 (110-152)||(29205451-29205493)
chr4 (94-147)||(36635315-36635368)
chr4 (107-152)||(54580033-54580078)
chr4 (94-185)||(40481628-40481718)
chr4 (94-152)||(16073386-16073443)
chr4 (110-152)||(21945510-21945552)
chr4 (94-152)||(35157995-35158053)
chr4 (121-216)||(715556-715648)
chr4 (121-216)||(752882-752974)
chr4 (111-152)||(6485621-6485662)
chr4 (93-214)||(12895227-12895343)
chr4 (94-204)||(27706129-27706245)
chr4 (68-152)||(37203231-37203313)
chr4 (108-152)||(12797348-12797391)
chr4 (107-150)||(4383372-4383414)
chr4 (110-149)||(14465088-14465127)
chr4 (94-152)||(30298937-30298996)
chr4 (94-152)||(30327805-30327864)
chr4 (94-152)||(49431016-49431075)
chr4 (110-152)||(38847022-38847064)
chr4 (110-152)||(51701265-51701307)
chr4 (110-147)||(8423733-8423770)
chr4 (110-147)||(15029772-15029809)
chr4 (107-152)||(24613711-24613756)
chr4 (111-147)||(903930-903966)
chr4 (111-147)||(22440615-22440651)
chr4 (111-147)||(40179651-40179687)
chr4 (91-147)||(40613438-40613494)
chr4 (110-150)||(47263993-47264033)
[»] chr5 (36 HSPs)
chr5 (94-216)||(31084314-31084436)
chr5 (98-216)||(21576696-21576809)
chr5 (110-216)||(43001807-43001913)
chr5 (94-152)||(6247613-6247671)
chr5 (68-152)||(8419991-8420076)
chr5 (94-152)||(14674260-14674318)
chr5 (110-152)||(21191066-21191108)
chr5 (94-152)||(24906311-24906369)
chr5 (94-152)||(33178016-33178074)
chr5 (110-152)||(39698548-39698590)
chr5 (94-216)||(21542021-21542149)
chr5 (93-215)||(15382467-15382592)
chr5 (94-152)||(21351915-21351973)
chr5 (110-152)||(42893367-42893409)
chr5 (94-152)||(4105248-4105308)
chr5 (96-173)||(10298562-10298639)
chr5 (111-152)||(13287409-13287450)
chr5 (107-152)||(15405065-15405110)
chr5 (94-216)||(21522741-21522869)
chr5 (94-216)||(21533307-21533435)
chr5 (111-216)||(23015935-23016040)
chr5 (94-147)||(41995462-41995515)
chr5 (110-214)||(27932242-27932341)
chr5 (107-139)||(40131625-40131657)
chr5 (110-152)||(7218277-7218319)
chr5 (110-152)||(7677712-7677754)
chr5 (98-152)||(17177033-17177087)
chr5 (95-152)||(30135305-30135363)
chr5 (110-147)||(6471904-6471941)
chr5 (110-162)||(14422911-14422961)
chr5 (111-147)||(5467993-5468029)
chr5 (110-138)||(22611761-22611789)
chr5 (111-147)||(28588689-28588725)
chr5 (111-183)||(38749542-38749614)
chr5 (111-139)||(40000558-40000586)
chr5 (110-150)||(41633742-41633782)
[»] chr7 (35 HSPs)
chr7 (110-216)||(5409782-5409888)
chr7 (113-216)||(9778510-9778613)
chr7 (100-214)||(32093967-32094083)
chr7 (94-213)||(24339633-24339758)
chr7 (94-216)||(43027415-43027537)
chr7 (93-162)||(25481892-25481961)
chr7 (110-216)||(13770698-13770804)
chr7 (53-152)||(24105629-24105727)
chr7 (110-152)||(26033471-26033513)
chr7 (107-152)||(3991328-3991373)
chr7 (107-167)||(7058430-7058490)
chr7 (77-152)||(9408344-9408420)
chr7 (94-161)||(11665441-11665508)
chr7 (110-216)||(21880159-21880260)
chr7 (94-152)||(27945032-27945090)
chr7 (96-138)||(35861957-35861999)
chr7 (111-152)||(7438714-7438755)
chr7 (107-152)||(8234150-8234195)
chr7 (107-152)||(11831436-11831481)
chr7 (108-148)||(13300415-13300455)
chr7 (96-152)||(18215196-18215252)
chr7 (111-174)||(11890907-11890970)
chr7 (94-149)||(29763187-29763242)
chr7 (110-152)||(11061086-11061128)
chr7 (111-152)||(18039006-18039048)
chr7 (94-152)||(33994203-33994261)
chr7 (111-216)||(1433462-1433567)
chr7 (110-147)||(2424621-2424658)
chr7 (98-152)||(11272596-11272652)
chr7 (94-147)||(22868033-22868086)
chr7 (95-152)||(25822647-25822704)
chr7 (110-147)||(29787384-29787421)
chr7 (95-152)||(40287367-40287423)
chr7 (110-154)||(23191903-23191947)
chr7 (110-146)||(32308127-32308163)
[»] chr8 (34 HSPs)
chr8 (53-152)||(25566787-25566890)
chr8 (94-215)||(36450706-36450822)
chr8 (79-152)||(30271301-30271375)
chr8 (94-216)||(15816069-15816197)
chr8 (95-152)||(30077397-30077454)
chr8 (108-152)||(4948657-4948701)
chr8 (94-216)||(31556988-31557104)
chr8 (111-216)||(41831886-41831991)
chr8 (96-152)||(22197752-22197808)
chr8 (94-162)||(22595985-22596053)
chr8 (110-152)||(2572066-2572108)
chr8 (110-152)||(8342979-8343021)
chr8 (110-152)||(8343323-8343365)
chr8 (94-152)||(13436974-13437032)
chr8 (94-152)||(22651967-22652025)
chr8 (94-152)||(29510314-29510372)
chr8 (111-152)||(20873077-20873118)
chr8 (107-216)||(29447050-29447165)
chr8 (112-152)||(40332200-40332240)
chr8 (94-152)||(4673435-4673493)
chr8 (109-147)||(14134705-14134743)
chr8 (110-152)||(18407726-18407768)
chr8 (107-152)||(31514876-31514922)
chr8 (110-147)||(3025558-3025595)
chr8 (111-152)||(4298896-4298937)
chr8 (110-147)||(34897092-34897129)
chr8 (111-147)||(11927101-11927137)
chr8 (107-167)||(17468503-17468563)
chr8 (94-150)||(18170494-18170550)
chr8 (94-150)||(18634062-18634118)
chr8 (110-162)||(21465419-21465471)
chr8 (95-131)||(24196628-24196664)
chr8 (164-216)||(34450972-34451024)
chr8 (112-152)||(44694800-44694840)
[»] chr1 (47 HSPs)
chr1 (110-215)||(1486656-1486761)
chr1 (76-216)||(37598804-37598939)
chr1 (78-146)||(9828019-9828087)
chr1 (68-152)||(22881626-22881716)
chr1 (94-152)||(113290-113348)
chr1 (52-152)||(21378528-21378627)
chr1 (107-152)||(24577196-24577241)
chr1 (111-216)||(40258884-40258984)
chr1 (111-215)||(6612112-6612222)
chr1 (94-216)||(32461404-32461531)
chr1 (110-212)||(51410031-51410129)
chr1 (110-152)||(1705002-1705044)
chr1 (110-216)||(22515838-22515939)
chr1 (94-152)||(48450597-48450655)
chr1 (112-152)||(18337338-18337378)
chr1 (71-147)||(43492509-43492585)
chr1 (110-161)||(18190109-18190160)
chr1 (94-152)||(1815248-1815306)
chr1 (110-152)||(31015050-31015092)
chr1 (110-152)||(31672905-31672947)
chr1 (110-152)||(38078671-38078713)
chr1 (110-152)||(42359459-42359501)
chr1 (94-152)||(46348393-46348451)
chr1 (94-152)||(47989489-47989546)
chr1 (110-147)||(398780-398817)
chr1 (107-152)||(6332675-6332719)
chr1 (94-216)||(18556396-18556524)
chr1 (107-152)||(28273098-28273143)
chr1 (107-152)||(32434726-32434771)
chr1 (95-146)||(12443476-12443527)
chr1 (53-147)||(36878417-36878505)
chr1 (53-100)||(48040536-48040583)
chr1 (109-147)||(7918226-7918264)
chr1 (94-147)||(9033022-9033076)
chr1 (94-152)||(19058866-19058924)
chr1 (109-147)||(34298442-34298480)
chr1 (110-147)||(5898281-5898318)
chr1 (94-147)||(6427341-6427394)
chr1 (94-147)||(10572604-10572657)
chr1 (95-152)||(14359532-14359588)
chr1 (110-147)||(16927200-16927237)
chr1 (110-139)||(23738685-23738714)
chr1 (110-147)||(36906004-36906041)
chr1 (110-147)||(40181878-40181915)
chr1 (111-147)||(1864895-1864931)
chr1 (111-139)||(9449031-9449059)
chr1 (95-147)||(10233245-10233297)
[»] chr6 (46 HSPs)
chr6 (94-177)||(10770659-10770742)
chr6 (55-215)||(12696277-12696436)
chr6 (93-152)||(34595124-34595183)
chr6 (94-216)||(8776919-8777041)
chr6 (68-152)||(7801166-7801251)
chr6 (94-152)||(16766688-16766746)
chr6 (94-152)||(16833299-16833357)
chr6 (107-216)||(31384924-31385038)
chr6 (94-212)||(8365463-8365587)
chr6 (96-152)||(1681751-1681807)
chr6 (94-152)||(853869-853927)
chr6 (94-152)||(7977840-7977898)
chr6 (94-152)||(17841599-17841657)
chr6 (53-152)||(28715241-28715344)
chr6 (96-152)||(9107380-9107436)
chr6 (111-150)||(5970120-5970159)
chr6 (110-152)||(9522898-9522940)
chr6 (110-152)||(25010212-25010254)
chr6 (110-152)||(31959166-31959208)
chr6 (94-147)||(7265608-7265661)
chr6 (110-214)||(28152106-28152204)
chr6 (107-147)||(34225824-34225864)
chr6 (94-177)||(3398610-3398692)
chr6 (112-147)||(16388248-16388283)
chr6 (94-152)||(17302547-17302606)
chr6 (94-152)||(426524-426582)
chr6 (110-152)||(1191710-1191752)
chr6 (94-152)||(7938107-7938165)
chr6 (98-216)||(17327601-17327719)
chr6 (110-152)||(17435206-17435248)
chr6 (111-152)||(403874-403915)
chr6 (111-152)||(4118343-4118384)
chr6 (110-147)||(6665220-6665257)
chr6 (110-147)||(7151419-7151456)
chr6 (110-147)||(9025509-9025546)
chr6 (107-152)||(15489742-15489787)
chr6 (111-152)||(17341674-17341715)
chr6 (110-147)||(19040359-19040396)
chr6 (94-150)||(31429015-31429071)
chr6 (110-138)||(2117083-2117111)
chr6 (111-159)||(6349740-6349788)
chr6 (111-150)||(8713987-8714027)
chr6 (94-134)||(21424830-21424870)
chr6 (94-138)||(24115871-24115915)
chr6 (111-147)||(31579240-31579276)
chr6 (110-162)||(32511666-32511718)
[»] chr3 (45 HSPs)
chr3 (110-216)||(28918008-28918111)
chr3 (94-216)||(4987231-4987359)
chr3 (83-151)||(34910297-34910365)
chr3 (94-216)||(15999961-16000084)
chr3 (94-212)||(10954943-10955056)
chr3 (80-152)||(28812492-28812564)
chr3 (110-173)||(25948876-25948939)
chr3 (90-152)||(14209100-14209162)
chr3 (110-216)||(27505253-27505359)
chr3 (98-216)||(55401070-55401183)
chr3 (94-152)||(20503456-20503514)
chr3 (110-152)||(26508117-26508159)
chr3 (110-167)||(3164020-3164077)
chr3 (77-152)||(25775481-25775558)
chr3 (94-177)||(21479109-21479193)
chr3 (110-170)||(49651778-49651838)
chr3 (52-151)||(14747510-14747610)
chr3 (110-152)||(1509546-1509588)
chr3 (94-152)||(8587031-8587089)
chr3 (94-152)||(10268496-10268554)
chr3 (94-152)||(11610512-11610570)
chr3 (110-152)||(21256996-21257038)
chr3 (110-152)||(51206363-51206405)
chr3 (110-147)||(7928457-7928494)
chr3 (97-146)||(14979175-14979224)
chr3 (93-150)||(15796306-15796363)
chr3 (94-216)||(41961590-41961718)
chr3 (109-216)||(29508450-29508558)
chr3 (94-138)||(40052323-40052367)
chr3 (93-152)||(35994748-35994806)
chr3 (94-152)||(10335296-10335354)
chr3 (94-152)||(14216883-14216941)
chr3 (94-152)||(14223012-14223070)
chr3 (94-152)||(14829681-14829738)
chr3 (110-152)||(14832106-14832148)
chr3 (110-152)||(26492215-26492257)
chr3 (110-152)||(34185133-34185175)
chr3 (110-147)||(11251985-11252022)
chr3 (111-168)||(16192744-16192801)
chr3 (88-137)||(24633751-24633800)
chr3 (111-147)||(4201404-4201440)
chr3 (122-214)||(7171520-7171607)
chr3 (95-147)||(12703999-12704051)
chr3 (95-147)||(14840306-14840358)
chr3 (95-147)||(18426941-18426993)
[»] scaffold0306 (1 HSPs)
scaffold0306 (94-216)||(13391-13514)
[»] scaffold0152 (1 HSPs)
scaffold0152 (94-216)||(21813-21936)
[»] scaffold0361 (1 HSPs)
scaffold0361 (95-152)||(14522-14579)
[»] chr2 (32 HSPs)
chr2 (110-216)||(30717470-30717582)
chr2 (93-152)||(19536407-19536467)
chr2 (51-152)||(21374709-21374811)
chr2 (110-216)||(2438670-2438771)
chr2 (96-150)||(15657857-15657911)
chr2 (94-216)||(38117110-38117227)
chr2 (107-176)||(974751-974820)
chr2 (111-152)||(30404860-30404901)
chr2 (107-150)||(12940947-12940990)
chr2 (94-152)||(12668433-12668491)
chr2 (94-152)||(15972864-15972922)
chr2 (94-152)||(18421954-18422012)
chr2 (94-152)||(18841023-18841081)
chr2 (94-172)||(24894380-24894458)
chr2 (94-152)||(37558968-37559026)
chr2 (53-152)||(20539684-20539783)
chr2 (110-147)||(28677916-28677953)
chr2 (97-150)||(30335411-30335464)
chr2 (94-162)||(20473313-20473381)
chr2 (112-152)||(37419752-37419792)
chr2 (94-152)||(23058452-23058511)
chr2 (110-168)||(4882690-4882748)
chr2 (110-152)||(11223873-11223915)
chr2 (110-152)||(33153431-33153473)
chr2 (94-152)||(36756354-36756412)
chr2 (110-152)||(39323271-39323313)
chr2 (110-147)||(21616769-21616806)
chr2 (110-147)||(21782833-21782870)
chr2 (109-137)||(11670761-11670789)
chr2 (94-138)||(18420458-18420502)
chr2 (164-216)||(24009351-24009403)
chr2 (111-147)||(28412358-28412394)
[»] scaffold0223 (1 HSPs)
scaffold0223 (93-152)||(20162-20221)
[»] scaffold0103 (1 HSPs)
scaffold0103 (94-152)||(51802-51860)
[»] scaffold0018 (1 HSPs)
scaffold0018 (94-152)||(178828-178887)
[»] scaffold0027 (1 HSPs)
scaffold0027 (93-150)||(46672-46729)
[»] scaffold0011 (1 HSPs)
scaffold0011 (107-152)||(17759-17804)
[»] scaffold0246 (1 HSPs)
scaffold0246 (94-185)||(19567-19657)
[»] scaffold0066 (1 HSPs)
scaffold0066 (95-150)||(33375-33430)
[»] scaffold0652 (1 HSPs)
scaffold0652 (110-152)||(472-514)
[»] scaffold0793 (1 HSPs)
scaffold0793 (121-216)||(4832-4924)
[»] scaffold0227 (1 HSPs)
scaffold0227 (95-152)||(7321-7378)
[»] scaffold0171 (1 HSPs)
scaffold0171 (53-177)||(23371-23494)
[»] scaffold0136 (1 HSPs)
scaffold0136 (111-152)||(3859-3900)
[»] scaffold0021 (1 HSPs)
scaffold0021 (111-152)||(130490-130531)
[»] scaffold0122 (1 HSPs)
scaffold0122 (95-147)||(8002-8054)
[»] scaffold0050 (1 HSPs)
scaffold0050 (111-214)||(70286-70384)
[»] scaffold0004 (2 HSPs)
scaffold0004 (94-152)||(123616-123677)
scaffold0004 (110-152)||(92814-92856)
[»] scaffold0053 (1 HSPs)
scaffold0053 (94-152)||(8789-8847)
[»] scaffold0025 (1 HSPs)
scaffold0025 (111-152)||(23777-23819)
[»] scaffold0003 (1 HSPs)
scaffold0003 (94-147)||(241585-241638)
[»] scaffold0450 (1 HSPs)
scaffold0450 (94-150)||(8647-8703)
[»] scaffold0044 (1 HSPs)
scaffold0044 (112-152)||(53189-53229)


Alignment Details
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 32273687 - 32273473
Alignment:
Q  1 gatcatgtgacattagttgtgactgaacaatgaaagtttaaattatgataaactatgaagcacgaatacggatatggacacagacaccggacatgacacg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32273687 gatcatgtgacattagttgtgactgaacaatgaaagtttaaattatgataaactatgaagcacgaatacggatatggacacagacaccggacatgacacg 32273588  T
Q  101 ccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgcca 200  Q
    ||||| ||||||||||||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||| ||||||| ||    
T  32273587 ccaacacaactaataatttgaaaaaataacataattcagaataattataagtttcgatgtcgagtcggacacgacacgtatccgatacggggacacgaca 32273488  T
Q  201 aatccaaggagtgtc 215  Q
    |||||||||||||||    
T  32273487 aatccaaggagtgtc 32273473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 3947818 - 3947712
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    ||||||||||||||||||| |||||||||| |||||||||||| |   ||||| |||||||||||||||| ||||| || ||||||| || ||||| |||    
T  3947818 ctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtccgacaccaggacacacctaatccgagg 3947719  T
Q  210 agtgtcc 216  Q
    |||||||    
T  3947718 agtgtcc 3947712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 12895190 - 12895101
Alignment:
Q  88 cggacatgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacac 177  Q
    |||||| |||||||| |  || ||||||||||||||||||||||||||||| ||||||||||||| | | ||||| ||||||||||||||    
T  12895190 cggacacgacacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacacgacac 12895101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 216
Target Start/End: Complemental strand, 23293055 - 23292937
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgagg 192  Q
    |||||||||| || || ||||||||||||||||||||||||||||||  ||||||||||| | |     | |||||||||||||||| ||||| ||  ||    
T  23293055 atgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcg-----gtgtcggacacgacacgtgtccgacaccggg 23292961  T
Q  193 acacgccaaatccaaggagtgtcc 216  Q
    ||||||| ||||| ||||||||||    
T  23292960 acacgcctaatccgaggagtgtcc 23292937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 28964300 - 28964199
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    |||||||||||||||||||||||||||||| |||||||||||| |   |||   |||||||||||||| ||||||| ||  ||||||||| ||||| |||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgt--ctgt---gtcggacacgacacatatccgacactgggacacgcctaatccgagg 28964206  T
Q  210 agtgtcc 216  Q
    |||||||    
T  28964205 agtgtcc 28964199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 214
Target Start/End: Original strand, 19482659 - 19482785
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtc------ggacacgacacgtatccgata 187  Q
    ||||||||| || |||||||||||||||||| |||||||||||| | |||||||||||| ||| ||||| |||      ||||||||||||| ||||| |    
T  19482659 tgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtccgaca 19482758  T
Q  188 cgaggacacgccaaatccaaggagtgt 214  Q
    |  |||||| || ||||| ||||||||    
T  19482759 ctgggacacacctaatccgaggagtgt 19482785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 11596438 - 11596362
Alignment:
Q  77 gacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||| |||||| |||| ||| ||||||||  | |||||||||||||||||||||||||||||| ||||||||||||    
T  11596438 gacacggacaccagacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagt 11596362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 29205451 - 29205493
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 29205493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 36635315 - 36635368
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| | ||||||||||||| ||||||||||||||||| |||||||    
T  36635315 tgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatta 36635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 54580078 - 54580033
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  54580078 caactaataatttgaaaaaatcacataattcagtgtaattataagt 54580033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 40481628 - 40481718
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc-gagtcggacacgacacgtatccga 185  Q
    ||||||||| |  |||||||||||||||||| |||||||||||||| |||||||||||| || ||||| | || ||||||||||||| |||||    
T  40481628 tgacacgccgatacaactaataatttgaaaa-atcacataattcagtgtaattacaagtgtt-atgtcggtgttggacacgacacgtgtccga 40481718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 16073386 - 16073443
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||| ||| |||||||||| ||||||| |||||||||| ||||||||||||    
T  16073386 tgacacgccaacacaagtaataatttg-aaaaatcgcataattcagtgtaattacaagt 16073443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 21945510 - 21945552
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  21945510 ctaataatttgaaaaaatgacataattcagtgtaattacaagt 21945552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 35158053 - 35157995
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || |||||||||||||| ||||||||||||||| || ||||||| ||||    
T  35158053 tgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagt 35157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 715648 - 715556
Alignment:
Q  121 aaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaaggagtgtcc 216  Q
    ||||||||||||||||||| |||||||||||| ||| ||||   | | ||||||||| | ||||| ||  ||||||||| ||||| ||||||||||    
T  715648 aaaaaatcacataattcagtgtaattacaagtgttggtgtc---ttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtcc 715556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 752974 - 752882
Alignment:
Q  121 aaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaaggagtgtcc 216  Q
    ||||||||||||||||||| |||||||||||| ||| ||||   | | ||||||||| | ||||| ||  ||||||||| ||||| ||||||||||    
T  752974 aaaaaatcacataattcagtgtaattacaagtgttggtgtc---ttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtcc 752882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 6485662 - 6485621
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagt 6485621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 214
Target Start/End: Complemental strand, 12895343 - 12895227
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgagg 192  Q
    |||||||||| || ||| ||||||||||||||||||||||||||  | ||||||| |||| | |     | ||||||||||||| |||||||| |   ||    
T  12895343 atgacacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcg-----gtgtcggacacgacatgtatccgacatcggg 12895249  T
Q  193 acacgccaaatccaaggagtgt 214  Q
    ||||||| ||||| ||||||||    
T  12895248 acacgcctaatccgaggagtgt 12895227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 204
Target Start/End: Complemental strand, 27706245 - 27706129
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcg------agtcggacacgacacgtatccgata 187  Q
    ||||||| | || ||| ||||||||| |||||||||||||||| || |||||||||||| |   |||||       ||||||||||||||||||||||||    
T  27706245 tgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacgacacgtatccgata 27706146  T
Q  188 cgaggacacgccaaatc 204  Q
    |  ||||||||| ||||    
T  27706145 ccgggacacgcctaatc 27706129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 37203231 - 37203313
Alignment:
Q  68 acggatatggacacagacaccggacatgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||| ||||||||||| |||||    || |  |||||||||||||||||| |||||||| || ||||||||||||    
T  37203231 acggatatggacacggacaccggacacgacacag--acacggctaataatttgaaaaaatgacataatttagtgtaattacaagt 37203313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 12797391 - 12797348
Alignment:
Q  108 aactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  12797391 aactaataatttgaaaaa-tcacataattcagtgtaattacaagt 12797348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 107 - 150
Target Start/End: Original strand, 4383372 - 4383414
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    |||||||||||||||||| |||||||||||||| ||||||||||    
T  4383372 caactaataatttgaaaa-atcacataattcagtgtaattacaa 4383414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 14465127 - 14465088
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattaca 149  Q
    |||||||||||||||||||||||||||||  |||||||||    
T  14465127 ctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 30298937 - 30298996
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaa-tcacataattcagagtaattacaagt 152  Q
    ||||||||| || || ||||||||||||||||| | ||||||||||| ||||||||||||    
T  30298937 tgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagt 30298996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 30327805 - 30327864
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaa-tcacataattcagagtaattacaagt 152  Q
    ||||||||| || || ||||||||||||||||| | ||||||||||| ||||||||||||    
T  30327805 tgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagt 30327864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 49431016 - 49431075
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaa-aatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || ||||||||||||||| ||||||||||||||| ||||||| ||||    
T  49431016 tgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagt 49431075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 38847064 - 38847022
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||| || |||||| ||||||||||||    
T  38847064 ctaataatttgaaaaaatcatattattcagtgtaattacaagt 38847022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 51701265 - 51701307
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||| |||||||| || ||||||||||||    
T  51701265 ctaataatttgaaaaaattacataattgagtgtaattacaagt 51701307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 8423770 - 8423733
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  8423770 ctaataatttgagaaaatcacataattcagtgtaatta 8423733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 15029772 - 15029809
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||||||| |||||||||||||| |||||||    
T  15029772 ctaataatttgaaaatatcacataattcagtgtaatta 15029809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 24613756 - 24613711
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||| ||||||||||||||||  |||| |||||||    
T  24613756 caactaataatttgagaaaatcacataattcaatgtaagtacaagt 24613711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 903930 - 903966
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaatta 903966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 22440651 - 22440615
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  22440651 taataatttgagaaaatcacataattcagtgtaatta 22440615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 40179687 - 40179651
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||| ||||||||||||||||||||||| |||||||    
T  40179687 taatagtttgaaaaaatcacataattcagtgtaatta 40179651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 40613438 - 40613494
Alignment:
Q  91 acatgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| || |  |||||| ||||| ||||||||||||||||| |||||||    
T  40613438 acatgacacgccgacaccgctaatattttgagaaaatcacataattcagtgtaatta 40613494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 47263993 - 47264033
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    ||||||||||| |||||||||||||||| | ||||||||||    
T  47263993 ctaataatttgtaaaaatcacataattctgtgtaattacaa 47264033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 31084314 - 31084436
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgagga 193  Q
    ||||||||| || || |||||||||||||||||||||||||||||  |||||||||||| | ||||||| |||||||||||||||| ||||| ||  |||    
T  31084314 tgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacgacacgtgtccgacactggga 31084413  T
Q  194 cacgccaaatccaaggagtgtcc 216  Q
    || ||| ||||| ||||||||||    
T  31084414 catgcctaatccgaggagtgtcc 31084436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 21576809 - 21576696
Alignment:
Q  98 acgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacg 197  Q
    |||||||| || |||||||||||||||||||||||||||||| |||||||||||| | |||     |||||||||||||||| || || ||  |||||||    
T  21576809 acgccaacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgat-----gtcggacacgacacgtgtctgacactgggacacg 21576715  T
Q  198 ccaaatccaaggagtgtcc 216  Q
    || ||||| ||||||||||    
T  21576714 cctaatccgaggagtgtcc 21576696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 43001807 - 43001913
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    |||||||||||||||||| ||||||||||| |||||||||||| ||| ||  | |||||||||||||||| ||  | ||  ||||||||| ||||| |||    
T  43001807 ctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgtcggacacgacacgtgtcaaacacctggacacgcctaatccgagg 43001906  T
Q  210 agtgtcc 216  Q
    |||||||    
T  43001907 agtgtcc 43001913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 6247613 - 6247671
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||    
T  6247613 tgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagt 6247671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 8419991 - 8420076
Alignment:
Q  68 acggatatggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||| |||||| ||||||||||| ||||||||| ||  | |||||||||||||||||| ||||||||||  ||||||||||||    
T  8419991 acggatacggacacggacaccggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagt 8420076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 14674260 - 14674318
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || ||||||||||||||||||||||||||| || ||||||||||||    
T  14674260 tgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagt 14674318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 21191108 - 21191066
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  21191108 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 21191066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 24906369 - 24906311
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||| ||  ||||||||||||||||| ||||||||||| ||||||||||||    
T  24906369 tgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagt 24906311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 33178016 - 33178074
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||||||||||||| |||||||||||||||| || ||||||||||||    
T  33178016 tgacacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagt 33178074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 39698548 - 39698590
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  39698548 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 39698590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 21542021 - 21542149
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc------gagtcggacacgacacgtatccgata 187  Q
    ||||| ||| || ||||||||||||| |||| || ||||||||||| |||||||||||| | | ||||      | |||||||||||||||| ||||| |    
T  21542021 tgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgaca 21542120  T
Q  188 cgaggacacgccaaatccaaggagtgtcc 216  Q
    |  ||||||||| |||||||||| |||||    
T  21542121 ccgggacacgccgaatccaaggaatgtcc 21542149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 15382467 - 15382592
Alignment:
Q  93 atgacacgccaacccaactaataatttg--aaaaaatcacataattcagagtaattacaagttttgatgtc-gagtcggacacgacacgtatccgatacg 189  Q
    |||||||||| || || |||||||||||  ||||||||| |||||||||  ||||||||||| | | |||| | || ||||||||||| | ||||| ||     
T  15382467 atgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcggtgttggacacgacacatgtccgacacc 15382566  T
Q  190 aggacacgccaaatccaaggagtgtc 215  Q
     ||||||||| ||||| |||||||||    
T  15382567 gggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 21351973 - 21351915
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||| || || |||||||||||| |||||| ||||||||||||| ||||||||||||    
T  21351973 tgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagt 21351915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 42893367 - 42893409
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||| ||| ||||||||||||    
T  42893367 ctaataatttgaaaaaatcacataatccagtgtaattacaagt 42893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 4105248 - 4105308
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaa--tcacataattcagagtaattacaagt 152  Q
    ||||||||| ||  |||||||||||||||||||  ||||||||||||| ||||||||||||    
T  4105248 tgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagt 4105308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 173
Target Start/End: Original strand, 10298562 - 10298639
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacg 173  Q
    ||||||| || ||||||||||||||||||| ||||||||| ||  |||||||||||| | | |||||  |||||||||    
T  10298562 acacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgtatcggacacg 10298639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 13287450 - 13287409
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  13287450 taataatttgaaaaaatcacataattcagtgtaactacaagt 13287409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 15405110 - 15405065
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||| ||||||||  ||||||||||||    
T  15405110 caactaataatttgaaaaaatcatataattcaatgtaattacaagt 15405065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 21522741 - 21522869
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc------gagtcggacacgacacgtatccgata 187  Q
    ||||||||| || || |||||||||| ||||||| ||||||||||| |||||||||| | | | ||||      | |||||||||||||||| ||||  |    
T  21522741 tgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggca 21522840  T
Q  188 cgaggacacgccaaatccaaggagtgtcc 216  Q
    |  ||||||||| ||||||| ||||||||    
T  21522841 ccgggacacgcctaatccaaagagtgtcc 21522869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 21533307 - 21533435
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc------gagtcggacacgacacgtatccgata 187  Q
    ||||||||| || || |||||||||| ||||||| ||||||||||| |||||||||| | | | ||||      | |||||||||||||||| ||||  |    
T  21533307 tgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggca 21533406  T
Q  188 cgaggacacgccaaatccaaggagtgtcc 216  Q
    |  ||||||||| ||||||| ||||||||    
T  21533407 ccgggacacgcctaatccaaagagtgtcc 21533435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 23016040 - 23015935
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagga 210  Q
    |||| |||||| ||||||||||||||||| ||||||| | || | ||||| |  |||||||||||| || ||||| |   ||||||||| ||||| ||||    
T  23016040 taatcatttgagaaaatcacataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgacattgggacacgcctaatccgagga 23015941  T
Q  211 gtgtcc 216  Q
    ||||||    
T  23015940 gtgtcc 23015935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 41995462 - 41995515
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||| || |||||||||||| |||||||||||||||||||  |||||||    
T  41995462 tgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 27932242 - 27932341
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    |||||||||||| ||||| ||||||||||| |||||||||| | |||     | |||||||||||||||| || || || |||||||||| ||| | |||    
T  27932242 ctaataatttgagaaaattacataattcagtgtaattacaaatcttg-----gtgtcggacacgacacgtgtcggacaccaggacacgcctaattcgagg 27932336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 139
Target Start/End: Original strand, 40131625 - 40131657
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcag 139  Q
    |||||||||||||||||||||||||||||||||    
T  40131625 caactaataatttgaaaaaatcacataattcag 40131657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 7218319 - 7218277
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||| || |||||||||||||||| ||||||||||||    
T  7218319 ctaataatttaaataaatcacataattcagtgtaattacaagt 7218277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 7677712 - 7677754
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||| | ||||| ||||    
T  7677712 ctaataatttgaaaaaatcacataattcagtgcaattagaagt 7677754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 17177087 - 17177033
Alignment:
Q  98 acgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||| || |||||||||||||||||||| | ||||||  ||||||||||||    
T  17177087 acgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagt 17177033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 30135305 - 30135363
Alignment:
Q  95 gacacgccaacccaactaataatttg-aaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||| || |||||||||||||| |||||||||||||| |||  ||||||||||||    
T  30135305 gacacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagt 30135363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 6471941 - 6471904
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  6471941 ctaataatttgagaaaatcacataattcagtgtaatta 6471904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 14422911 - 14422961
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcg 162  Q
    ||||||||||  |||||||||||||||||| ||||||| |||||| |||||||    
T  14422911 ctaataattt--aaaaatcacataattcagtgtaattataagtttcgatgtcg 14422961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 5468029 - 5467993
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  5468029 taataatttgataaaatcacataattcagtgtaatta 5467993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 138
Target Start/End: Complemental strand, 22611789 - 22611761
Alignment:
Q  110 ctaataatttgaaaaaatcacataattca 138  Q
    |||||||||||||||||||||||||||||    
T  22611789 ctaataatttgaaaaaatcacataattca 22611761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 28588725 - 28588689
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  28588725 taataatttgagaaaatcacataattcagtgtaatta 28588689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 183
Target Start/End: Complemental strand, 38749614 - 38749542
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatcc 183  Q
    ||||||||||||||||| ||||||||||  ||||||| | || ||| ||| | ||||||||||| | ||||||    
T  38749614 taataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcggacacgatatgtatcc 38749542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 40000586 - 40000558
Alignment:
Q  111 taataatttgaaaaaatcacataattcag 139  Q
    |||||||||||||||||||||||||||||    
T  40000586 taataatttgaaaaaatcacataattcag 40000558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 41633742 - 41633782
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    |||||||||||||||| | ||||||||||| ||||||||||    
T  41633742 ctaataatttgaaaaatttacataattcagtgtaattacaa 41633782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 4e-25; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 5409888 - 5409782
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    |||||||||||||||||||||||||||||| | |||||||||| | | ||||| |||||||||||||||| ||||| ||  ||||||||| ||||| |||    
T  5409888 ctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagg 5409789  T
Q  210 agtgtcc 216  Q
    |||||||    
T  5409788 agtgtcc 5409782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 113 - 216
Target Start/End: Original strand, 9778510 - 9778613
Alignment:
Q  113 ataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaaggagt 212  Q
    |||||||||||||||||||||||||||  ||||||||||| | | ||||| ||||||||| |||||| ||||| ||  ||||||||| ||||||||||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggacacaacacgtgtccgacaccgggacacgcctaatccaaggagt 9778609  T
Q  213 gtcc 216  Q
    ||||    
T  9778610 gtcc 9778613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 32094083 - 32093967
Alignment:
Q  100 gccaacccaactaataatttgaaaaaa-tcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgata-cgaggacacg 197  Q
    |||||| |||||||||||||||||||| ||||||||||||| |||||||||| | | | ||||| |||||||||||||||| ||||| | || |||||||    
T  32094083 gccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacgacacgtgtccgacaccggggacacg 32093984  T
Q  198 ccaaatccaaggagtgt 214  Q
    || ||||| ||||||||    
T  32093983 cctaatccgaggagtgt 32093967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 213
Target Start/End: Original strand, 24339633 - 24339758
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc------gagtcggacacgacacgtatccgata 187  Q
    ||||||||| || || |||||||||||||||||||||||||||||| |||||||||||| | | ||||      | |||||||||||||||||||||| |    
T  24339633 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgaca 24339732  T
Q  188 cgaggacacgccaaatccaaggagtg 213  Q
    |  ||||||||| ||||| |||||||    
T  24339733 ccgggacacgcctaatccgaggagtg 24339758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 43027537 - 43027415
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgagga 193  Q
    ||||||| | ||||| |||||||||||||||||||||||||| ||| |||| ||||||| | | ||||| ||| |||||||||||| ||||| ||  |||    
T  43027537 tgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgacacgtgtccgacaccggga 43027438  T
Q  194 cacgccaaatccaaggagtgtcc 216  Q
    |||||| ||||| | ||||||||    
T  43027437 cacgcctaatccgatgagtgtcc 43027415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 25481892 - 25481961
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcg 162  Q
    |||||||||| || || |||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  25481892 atgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcg 25481961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 13770698 - 13770804
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    |||||||||| ||||||| ||||||||||| |||||||||||| | | ||||| ||||||||| |||||| ||||| ||  | ||||||| ||||| | |    
T  13770698 ctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcggacacaacacgtgtccgacaccggaacacgcctaatccgaag 13770797  T
Q  210 agtgtcc 216  Q
    |||||||    
T  13770798 agtgtcc 13770804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 24105629 - 24105727
Alignment:
Q  53 ctatgaagcacgaatacggatatggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaag 151  Q
    |||||||||||| ||||||||| |||||| ||||| ||||| ||||||||| || || ||||||||||||||||||  ||| |||||| |||||||||||    
T  24105629 ctatgaagcacggatacggatacggacac-gacac-ggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaag 24105726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 26033513 - 26033471
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 26033471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 3991328 - 3991373
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  3991328 caactaataatttgaaaaaatcacataattcagtataattacaagt 3991373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 107 - 167
Target Start/End: Original strand, 7058430 - 7058490
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcg 167  Q
    |||||||||||||||||||||||  |||||||| |||||||||||| ||| ||||| ||||    
T  7058430 caactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcgtgtcg 7058490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 9408420 - 9408344
Alignment:
Q  77 gacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||| |||||| |||| |||||| || || ||| |||||||||||||||||||||||||| || ||||||||||||    
T  9408420 gacacggacaccagacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagt 9408344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 11665508 - 11665441
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc 161  Q
    ||||||||  || |||||||||||||||||||||||||||||||||  |||||| |||| | ||||||    
T  11665508 tgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 21880159 - 21880260
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    |||||||||||| ||||| ||||||||||| |||||||||||| | |     | |||||||||||||| | ||||| || |||||||||| ||||| ||     
T  21880159 ctaataatttgagaaaattacataattcagtgtaattacaagtgtcg-----gtgtcggacacgacacatgtccgacaccaggacacgcctaatccgaga 21880253  T
Q  210 agtgtcc 216  Q
    |||||||    
T  21880254 agtgtcc 21880260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 27945032 - 27945090
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || | ||||||||||||| ||||| ||||||||||| ||||||||||||    
T  27945032 tgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagt 27945090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 138
Target Start/End: Original strand, 35861957 - 35861999
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattca 138  Q
    ||||||| || ||||||||||||||||||||||||||||||||    
T  35861957 acacgccgacacaactaataatttgaaaaaatcacataattca 35861999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 7438714 - 7438755
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  7438714 taataatttgaaaaaatcacataattcaatgtaattacaagt 7438755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 8234150 - 8234195
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  8234150 caactaataatttgaaaaaataacataattcagtgtagttacaagt 8234195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 11831436 - 11831481
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||| |||||| || ||||||||||||    
T  11831436 caactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 13300415 - 13300455
Alignment:
Q  108 aactaataatttgaaaaaatcacataattcagagtaattac 148  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  13300415 aactaataatttgaaaaaatcatataattcagtgtaattac 13300455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 18215252 - 18215196
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||| || || |||||||||||||||||||||||||| ||| ||| ||||||||    
T  18215252 acacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagt 18215196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 11890970 - 11890907
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacga 174  Q
    ||||||||||||||||||| ||||||||| |||||||  ||| | | ||||| |||||||||||    
T  11890970 taataatttgaaaaaatcatataattcagtgtaattatgagtgtaggtgtcgtgtcggacacga 11890907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 29763242 - 29763187
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattaca 149  Q
    |||||| ||||| ||||| |||||||||||||||||||||||| || ||| |||||    
T  29763242 tgacacaccaacacaacttataatttgaaaaaatcacataattaagtgtagttaca 29763187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 11061128 - 11061086
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||| ||  |||||||||||    
T  11061128 ctaataatttgaaaaaatcacataatttagtataattacaagt 11061086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 18039006 - 18039048
Alignment:
Q  111 taataatttgaaaa-aatcacataattcagagtaattacaagt 152  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagt 18039048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 33994203 - 33994261
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || |||||| |||||||||||  ||||||||||||| | ||||||||||    
T  33994203 tgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagt 33994261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 1433462 - 1433567
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagga 210  Q
    ||||||||||| |||||||||| |||  | ||||||| | || | | ||||| |||||||| |||| || ||||| || |||||||| | ||||| ||||    
T  1433462 taataatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtccgacaccaggacacgtctaatccgagga 1433561  T
Q  211 gtgtcc 216  Q
    ||||||    
T  1433562 gtgtcc 1433567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 2424621 - 2424658
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  2424621 ctaataatttgagaaaatcacataattcagtgtaatta 2424658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 11272652 - 11272596
Alignment:
Q  98 acgccaacccaactaataatttgaaaaaatcac--ataattcagagtaattacaagt 152  Q
    ||||| || ||||| ||||||||||||||||||  ||||||||| ||||||||||||    
T  11272652 acgccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagt 11272596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 22868033 - 22868086
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||| || | ||||||||| ||| ||||||||||||||||| |||||||    
T  22868033 tgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaatta 22868086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 25822647 - 25822704
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||| || ||||||||||||||||||||   || ||||||| ||||||||||||    
T  25822647 gacacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagt 25822704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 29787421 - 29787384
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  29787421 ctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 40287423 - 40287367
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||| || |||| |||||||||||||||||| || |||||| ||||||||||||    
T  40287423 gacacgccgacacaacgaataatttgaaaaaatcatat-attcagtgtaattacaagt 40287367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Original strand, 23191903 - 23191947
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttt 154  Q
    |||||||||||| ||||||||||| ||||| ||||||||| ||||    
T  23191903 ctaataatttgagaaaatcacatatttcagtgtaattacatgttt 23191947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Original strand, 32308127 - 32308163
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatt 146  Q
    |||||||||||| ||||||||||||||||| ||||||    
T  32308127 ctaataatttgagaaaatcacataattcagtgtaatt 32308163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 25566787 - 25566890
Alignment:
Q  53 ctatgaagcacgaatacggatatggacacagacaccggacatgacac-gcca---acccaactaataatttgaaaaaatcacataattcagagtaattac 148  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| | ||   || || |||||||||||||||||||||||||||||| ||||||||    
T  25566787 ctatgaagcacggatacggatatagacacagacaccggacatgacacagacactgacacagctaataatttgaaaaaatcacataattcagtgtaattac 25566886  T
Q  149 aagt 152  Q
    ||||    
T  25566887 aagt 25566890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 36450822 - 36450706
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgagga 193  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||| | |     | |||||||||||| ||| ||||| || ||||    
T  36450822 tgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtag-----gtgtcggacacgacgcgtgtccgacaccagga 36450728  T
Q  194 cacgccaaatccaaggagtgtc 215  Q
    |||||| ||||| |||||||||    
T  36450727 cacgcctaatccgaggagtgtc 36450706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 79 - 152
Target Start/End: Complemental strand, 30271375 - 30271301
Alignment:
Q  79 cacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||| ||||||||| || || ||||| |||||||||||||||||||| ||| ||||||||||||    
T  30271375 cacagacaccggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagt 30271301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 15816197 - 15816069
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc------gagtcggacacgacacgtatccgata 187  Q
    ||||||||| || |||||||||||||||||||||||||||||| || ||||||| |||| | | ||||      | ||||||||||||||| |||||| |    
T  15816197 tgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgaca 15816098  T
Q  188 cgaggacacgccaaatccaaggagtgtcc 216  Q
    |  ||||||||| ||||| || |||||||    
T  15816097 ccgggacacgcctaatccgagaagtgtcc 15816069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 30077454 - 30077397
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||| || ||||||||||||||| |||||||||||||| ||||||||||||    
T  30077454 gacacgccaacgcagctaataatttgaaaacatcacataattcagtgtaattacaagt 30077397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 152
Target Start/End: Original strand, 4948657 - 4948701
Alignment:
Q  108 aactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||||| ||||||||||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagt 4948701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 31556988 - 31557104
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgagga 193  Q
    ||||||||| || ||  |||||||||||||| |||||||||||||| |||||||||||||| |     | ||| |||||||||| | ||||| || ||||    
T  31556988 tgacacgccgacacagttaataatttgaaaa-atcacataattcagtgtaattacaagtttcg-----gtgtcagacacgacacatgtccgacaccagga 31557081  T
Q  194 cacgccaaatccaaggagtgtcc 216  Q
    |||||| ||||||||| ||||||    
T  31557082 cacgcctaatccaaggtgtgtcc 31557104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 41831991 - 41831886
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagga 210  Q
    ||||||||||||||||||||||||||||| |||| ||||||| | |   | | ||||||||||| |||||||||| |  |||||||| | ||| | ||||    
T  41831991 taataatttgaaaaaatcacataattcagtgtaactacaagtgtcgtgttggtgtcggacacgatacgtatccgacaacaggacacgtctaattcgagga 41831892  T
Q  211 gtgtcc 216  Q
    ||||||    
T  41831891 gtgtcc 41831886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 22197808 - 22197752
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||| || |||||||||||||||| |||||||||| || ||||||||||||    
T  22197808 acacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagt 22197752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 22595985 - 22596053
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcg 162  Q
    ||||||||| || || |||||||||| ||||||| ||||||||||| |||||||||||| ||| |||||    
T  22595985 tgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtcg 22596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 2572108 - 2572066
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  2572108 ctaataatttgaaaaaatcacataatttagtgtaattacaagt 2572066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 8342979 - 8343021
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  8342979 ctaataatttgaaaaaatcacataatttagtgtaattacaagt 8343021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 8343323 - 8343365
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  8343323 ctaataatttgaaaaaatcacataatttagtgtaattacaagt 8343365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 13437032 - 13436974
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||||||||||||||  ||||| ||||||    
T  13437032 tgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagt 13436974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 22651967 - 22652025
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||||||||||||||   |||||||||||    
T  22651967 tgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagt 22652025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 29510372 - 29510314
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||||||| |||||||  |||||||||||    
T  29510372 tgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagt 29510314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 20873077 - 20873118
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagt 20873118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 29447165 - 29447050
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc------gagtcggacacgacacgtatccgatacgaggacacgcca 200  Q
    ||||||||||||||| ||||||||||||||||  |||| ||||||| | | ||||      | ||||||||||||| || || || || ||||||||||     
T  29447165 caactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcct 29447066  T
Q  201 aatccaaggagtgtcc 216  Q
    ||||| ||||||||||    
T  29447065 aatcctaggagtgtcc 29447050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 40332200 - 40332240
Alignment:
Q  112 aataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||| ||||||||||||||||| ||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagt 40332240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 4673493 - 4673435
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||  ||||||||||||||||||| | ||||||| ||||||||||||    
T  4673493 tgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaattacaagt 4673435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 14134705 - 14134743
Alignment:
Q  109 actaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  14134705 actaataatttgagaaaatcacataattcagtgtaatta 14134743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 18407726 - 18407768
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||  ||||||||||||||||||| ||||||||||||    
T  18407726 ctaataattcaaaaaaatcacataattcagtgtaattacaagt 18407768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 31514876 - 31514922
Alignment:
Q  107 caactaataatttgaaaa-aatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||| ||||||||||||||| |||| |||||||    
T  31514876 caactaataatttgaaaaaaatcacataattcagcgtaactacaagt 31514922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 3025558 - 3025595
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  3025558 ctaataatttgagaaaatcacataattcagtgtaatta 3025595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 4298937 - 4298896
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  4298937 taataatttgaaaaaatcacataatttaatgtaattacaagt 4298896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 34897092 - 34897129
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  34897092 ctaataatttgagaaaatcacataattcagtgtaatta 34897129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 11927137 - 11927101
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  11927137 taataatttgataaaatcacataattcagtgtaatta 11927101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 17468563 - 17468503
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcg 167  Q
    |||| ||||||||| |||||||||||||| | | |||||||||||| ||| ||||| ||||    
T  17468563 caacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcgtgtcg 17468503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 18170550 - 18170494
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    ||||||||| || ||| ||| ||||||||||||| ||||||||||  ||||||||||    
T  18170550 tgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaa 18170494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 18634118 - 18634062
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    ||||||||| || ||| ||| ||||||||||||| ||||||||||  ||||||||||    
T  18634118 tgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaa 18634062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Original strand, 21465419 - 21465471
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcg 162  Q
    |||||||||||||||||||| |||||||   |||||||||||| ||| |||||    
T  21465419 ctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcg 21465471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 24196664 - 24196628
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcaca 131  Q
    |||||||| || |||||||||||||||||||||||||    
T  24196664 gacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Complemental strand, 34451024 - 34450972
Alignment:
Q  164 gtcggacacgacacgtatccgatacgaggacacgccaaatccaaggagtgtcc 216  Q
    |||||||||||||||| || || ||| |||||||||  |||||||||||||||    
T  34451024 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 34450972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 44694800 - 44694840
Alignment:
Q  112 aataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||| |||||||||||||||| || ||||||||||||    
T  44694800 aataattttaaaaaatcacataattaagcgtaattacaagt 44694840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 215
Target Start/End: Complemental strand, 1486761 - 1486656
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    |||||||||||||||||||||||||||||| ||||||| |||| | | ||||| |||||||||||||||| ||||| ||  ||||||||| ||||| |||    
T  1486761 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccgggacacgcctaatccgagg 1486662  T
Q  210 agtgtc 215  Q
    ||||||    
T  1486661 agtgtc 1486656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 76 - 216
Target Start/End: Original strand, 37598804 - 37598939
Alignment:
Q  76 ggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacga 174  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||| ||||||| |||| | |     | |||||||||||    
T  37598804 ggacacagacaccggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcg-----gtgtcggacacga 37598897  T
Q  175 cacgtatccgatacgaggacacgccaaatccaaggagtgtcc 216  Q
    ||||| ||||| |   ||||||||| ||||| ||||||||||    
T  37598898 cacgtgtccgacaatgggacacgcctaatccgaggagtgtcc 37598939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 9828019 - 9828087
Alignment:
Q  78 acacagacaccggacatgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatt 146  Q
    |||||||||||||||| |||||||| || | ||||||||||||| ||||||||||||||||| ||||||    
T  9828019 acacagacaccggacacgacacgccgacaccactaataatttgataaaatcacataattcagtgtaatt 9828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 22881716 - 22881626
Alignment:
Q  68 acggatatggacacagacaccggaca------tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||| ||||| |||||||||||      ||||||||| || |||||||||||||||||||||||||||||| || ||||||||||||    
T  22881716 acggatatagacacggacaccggacacgacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagt 22881626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 113290 - 113348
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||    
T  113290 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagt 113348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 52 - 152
Target Start/End: Original strand, 21378528 - 21378627
Alignment:
Q  52 actatgaagcacgaatacggatatggacacagacaccggacatg-acacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    ||||||||||||| |||| ||||||||||| ||||| ||||||| |||| || || || ||||||| |||||||||| ||||||||||| ||||||||||    
T  21378528 actatgaagcacggatacagatatggacac-gacac-ggacatggacacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaa 21378625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 24577241 - 24577196
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  24577241 caactaataatttgaaaaaatcacataattcagtgtaattacaagt 24577196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 40258984 - 40258884
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagga 210  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |     | ||| |||||||||| | ||||| || |||||||||| ||||| ||||    
T  40258984 taataatttgaaaaaatcacataattcagtgtaattacaagtgtcg-----gtgtcagacacgacacctgtccgacaccaggacacgcctaatccgagga 40258890  T
Q  211 gtgtcc 216  Q
    ||||||    
T  40258889 gtgtcc 40258884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 6612222 - 6612112
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcg------agtcggacacgacacgtatccgatacgaggacacgccaaatc 204  Q
    ||||||||||||||||| ||||||||||| |||||||||||| | | |||||       ||||||||||| | || ||||| || |||||||||| ||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatc 6612123  T
Q  205 caaggagtgtc 215  Q
    |||||||||||    
T  6612122 caaggagtgtc 6612112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 32461531 - 32461404
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgt-----cgagtcggacacgacacgtatccgatac 188  Q
    |||||||||  | |||||||||||||||||||||||||||||| |  |||||||||||| ||| |||      | |||||||||||||||| || || ||    
T  32461531 tgacacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgtgtgtcggtgtcggacacgacacgtgtctgacac 32461432  T
Q  189 gaggacacgccaaatccaaggagtgtcc 216  Q
      ||||||||| |||||||| |||||||    
T  32461431 tgggacacgcctaatccaagaagtgtcc 32461404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 51410031 - 51410129
Alignment:
Q  110 ctaataatttgaaaa-aatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaag 208  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| | |     | |||||||||||||||||||||| ||   |||||||| ||||||||    
T  51410031 ctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcg-----gtgtcggacacgacacgtatccgacaccgagacacgcctaatccaag 51410125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 1705044 - 1705002
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  1705044 ctaataatttgaaaaaatcacataattcagggtaattacaagt 1705002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 22515939 - 22515838
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    ||||||||||||||||||||||||||| || |||||||||||| | |     | |||||||||||||| ||||||| ||   |||||||| ||||| |||    
T  22515939 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg-----gtgtcggacacgacacatatccgacaccgagacacgcctaatccgagg 22515845  T
Q  210 agtgtcc 216  Q
    |||||||    
T  22515844 agtgtcc 22515838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 48450655 - 48450597
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||| || |||||||||||||||||| |||||||| || ||||||||||||    
T  48450655 tgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagt 48450597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 18337338 - 18337378
Alignment:
Q  112 aataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagt 18337378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 147
Target Start/End: Complemental strand, 43492585 - 43492509
Alignment:
Q  71 gatatggacacagacaccggacatgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||| |||||||||||||||||| |||||||| || | |||| |||||||| |||||||| |||||| | |||||||    
T  43492585 gatacggacacagacaccggacacgacacgccgacaccactagtaatttgagaaaatcacgtaattcggtgtaatta 43492509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 161
Target Start/End: Complemental strand, 18190160 - 18190109
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc 161  Q
    |||||||||||||||||| ||||||||||| |||||||||||| | ||||||    
T  18190160 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 1815248 - 1815306
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||| |||| |||| ||||||||||||||||||| ||||||||||||    
T  1815248 tgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagt 1815306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 31015050 - 31015092
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||| ||||||||||||||||| ||||||||||||    
T  31015050 ctaataatttgagaaaatcacataattcagtgtaattacaagt 31015092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 31672947 - 31672905
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||| |||||||| ||||||||||||    
T  31672947 ctaataatttgaaaaaatcacttaattcagtgtaattacaagt 31672905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 38078713 - 38078671
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||  ||||||||||||    
T  38078713 ctaataatttgaaaaaatcacataattcaatgtaattacaagt 38078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 42359501 - 42359459
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  42359501 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagt 42359459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 46348451 - 46348393
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||||| |||||| || ||||||||||||    
T  46348451 tgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagt 46348393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 47989489 - 47989546
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||| ||||||||| ||||||||||||||||||| ||||||||||||    
T  47989489 tgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagt 47989546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 398817 - 398780
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||||||||||||||||||||| |||||||    
T  398817 ctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Original strand, 6332675 - 6332719
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  6332675 caactaataatttgaaaa-atcacataattcagtgtaattacaagt 6332719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 18556524 - 18556396
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc------gagtcggacacgacacgtatccgata 187  Q
    ||||||||| || || ||||||||||||||| ||||||||||| |  |||||||||||| ||| ||||      | ||| ||| |||||||||||||| |    
T  18556524 tgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcgtgacggtgtcagacccgacacgtatccgaca 18556425  T
Q  188 cgaggacacgccaaatccaaggagtgtcc 216  Q
    |  ||||||||| ||||| || |||||||    
T  18556424 ctgggacacgcctaatccgagaagtgtcc 18556396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 28273143 - 28273098
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||| |||||||||||||| ||||||||| ||||||||||||    
T  28273143 caactaatcatttgaaaaaatcatataattcagtgtaattacaagt 28273098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 32434771 - 32434726
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||    
T  32434771 caactaataatttgaaaaagtcacataattcattgtaattacaagt 32434726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 12443527 - 12443476
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatt 146  Q
    |||||||| || || |||||||||||| ||||||||||||||||| ||||||    
T  12443527 gacacgccgacacagctaataatttgagaaaatcacataattcagtgtaatt 12443476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 147
Target Start/End: Original strand, 36878417 - 36878505
Alignment:
Q  53 ctatgaagcacgaatacggatatggacacagacaccggacatgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||| | ||||| ||||||      ||||||||| || |  |||||||||||| ||||||||||||||||| |||||||    
T  36878417 ctatgaagcacggatacggacacggacatagacac------tgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 36878505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 100
Target Start/End: Complemental strand, 48040583 - 48040536
Alignment:
Q  53 ctatgaagcacgaatacggatatggacacagacaccggacatgacacg 100  Q
    |||||||||||| ||||||||||||| || ||||||||||| ||||||    
T  48040583 ctatgaagcacgtatacggatatggatacggacaccggacacgacacg 48040536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 7918264 - 7918226
Alignment:
Q  109 actaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  7918264 actaataatttgagaaaatcacataattcagtgtaatta 7918226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 9033076 - 9033022
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaa-tcacataattcagagtaatta 147  Q
    ||||||| |||| | |||||||||||||||||| ||||||||||||| |||||||    
T  9033076 tgacacgtcaacaccactaataatttgaaaaaaatcacataattcagtgtaatta 9033022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 19058924 - 19058866
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||| |||| || ||||||||||| ||||||||||||    
T  19058924 tgacacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagt 19058866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 34298442 - 34298480
Alignment:
Q  109 actaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  34298442 actaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 5898318 - 5898281
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||| ||||||||||||||||||||| |||||||    
T  5898318 ctaataatctgaaaaaatcacataattcagtgtaatta 5898281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 6427341 - 6427394
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| |  |||||||||||| ||||||||||||||||  |||||||    
T  6427341 tgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaatta 6427394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 10572657 - 10572604
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||| || | ||||||||||||| ||||||||||||||| | |||||||    
T  10572657 tgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaatta 10572604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 14359588 - 14359532
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||| || || |||||||||||||||| |||||||||| || ||||||||||||    
T  14359588 gacacgccgacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagt 14359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 16927237 - 16927200
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  16927237 ctaataatttgaaaaaatcatataattcagtgtaatta 16927200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 139
Target Start/End: Original strand, 23738685 - 23738714
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcag 139  Q
    ||||||||||||||||||||||||||||||    
T  23738685 ctaataatttgaaaaaatcacataattcag 23738714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 36906004 - 36906041
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||| ||| |||||||||||||||||||||||||    
T  36906004 ctaataatctgagaaaatcacataattcagagtaatta 36906041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 40181878 - 40181915
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  40181878 ctaataatttgagaaaatcacataattcagtgtaatta 40181915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 1864931 - 1864895
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  1864931 taataatttgagaaaatcacataattcagtgtaatta 1864895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 139
Target Start/End: Complemental strand, 9449059 - 9449031
Alignment:
Q  111 taataatttgaaaaaatcacataattcag 139  Q
    |||||||||||||||||||||||||||||    
T  9449059 taataatttgaaaaaatcacataattcag 9449031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 10233245 - 10233297
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||| ||||| | |||||||| |||| ||||||||||||||||| |||||||    
T  10233245 gacacaccaacaccactaataaattgagaaaatcacataattcagtgtaatta 10233297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 10770742 - 10770659
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacac 177  Q
    |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| | | ||||| ||| ||||||||||    
T  10770742 tgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcagacacgacac 10770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 55 - 215
Target Start/End: Original strand, 12696277 - 12696436
Alignment:
Q  55 atgaagcacgaatacggatatggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagtt 153  Q
    |||||||||| ||||||| | |||||| ||||| ||||| ||||||||| || || |||||||||||||||||| ||||||||||| ||||||||||||     
T  12696277 atgaagcacggatacggacacggacac-gacac-ggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtg 12696374  T
Q  154 ttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaaggagtgtc 215  Q
    |   ||||| |||||||||||||||| || || ||  |||||| ||  ||||||||||||||    
T  12696375 tcagtgtcgtgtcggacacgacacgtgtctgacaccgggacacaccttatccaaggagtgtc 12696436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 34595124 - 34595183
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  34595124 atgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagt 34595183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 8777041 - 8776919
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgagga 193  Q
    ||||||||| || ||||||||||||||||||||||||| ||||||| |||||||||||| ||| |||||     |||||||||||| ||||| ||   ||    
T  8777041 tgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcggacacgacacgacacgtgtccgacaccgaga 8776942  T
Q  194 cacgccaaatccaaggagtgtcc 216  Q
    ||| || ||||| ||||||||||    
T  8776941 cacacctaatccgaggagtgtcc 8776919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 7801251 - 7801166
Alignment:
Q  68 acggatatggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||| |||||| || |||| ||| | ||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  7801251 acggatacggacacggataccgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagt 7801166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 16766688 - 16766746
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||    
T  16766688 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagt 16766746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 16833299 - 16833357
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  16833299 tgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagt 16833357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 31384924 - 31385038
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt-----tttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaa 201  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||     | |  ||| | || ||||||||||||| ||| | ||  ||||||||| |    
T  31384924 caactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtagtgttggacacgacacgtgtcctacaccgggacacgccta 31385023  T
Q  202 atccaaggagtgtcc 216  Q
    |||||||||||||||    
T  31385024 atccaaggagtgtcc 31385038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 212
Target Start/End: Complemental strand, 8365587 - 8365463
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgag------tcggacacgacacgtatccgata 187  Q
    ||||||||| || |||||||||||||||||| |||||||||||| | |||||||||||| | | ||||| |      ||||||||||||||| ||||| |    
T  8365587 tgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgaca 8365488  T
Q  188 cgaggacacgccaaatccaaggagt 212  Q
    |  ||||||||| ||||| ||||||    
T  8365487 ctgggacacgcctaatccgaggagt 8365463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 1681751 - 1681807
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||| || |||||||||||||||||||||||| |||||||| ||||||||||||    
T  1681751 acacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagt 1681807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 853927 - 853869
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || |||||||||||||||||||||||||||||| || | ||||||||||    
T  853927 tgacacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagt 853869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 7977898 - 7977840
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||| ||||||||||| ||||||||||||    
T  7977898 tgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagt 7977840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 17841657 - 17841599
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || ||||||||||||||||||||||||||| || ||||||||||||    
T  17841657 tgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagt 17841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 28715241 - 28715344
Alignment:
Q  53 ctatgaagcacgaatacggatatggacacagacaccggacatgacacg----ccaacccaactaataatttgaaaaaatcacataattcagagtaattac 148  Q
    |||||||||||| ||||||||| |||||| ||||||||||| || |||    |  || |  |||||||||||||||||| ||||||||||| ||||||||    
T  28715241 ctatgaagcacggatacggatacggacacggacaccggacacgatacggacactgacacggctaataatttgaaaaaatgacataattcagtgtaattac 28715340  T
Q  149 aagt 152  Q
    ||||    
T  28715341 aagt 28715344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 9107436 - 9107380
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||| || || |||||||||||||||||||||| ||||||| ||||||||||||    
T  9107436 acacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagt 9107380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 150
Target Start/End: Complemental strand, 5970159 - 5970120
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  5970159 taataatttgaaaaaatcacataattcagtgtaattacaa 5970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 9522898 - 9522940
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagt 9522940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 25010254 - 25010212
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||| || |||||||||    
T  25010254 ctaataatttgaaaaaatcacataattcagcgttattacaagt 25010212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 31959166 - 31959208
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||| ||| ||||||||||||    
T  31959166 ctaataatttgaaaaaatcacataatgcagtgtaattacaagt 31959208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 147
Target Start/End: Complemental strand, 7265661 - 7265608
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| |  |||||||||||| ||||||||||||||||| |||||||    
T  7265661 tgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaatta 7265608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 214
Target Start/End: Original strand, 28152106 - 28152204
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    ||||||||||||||| |||||||||||||| |||||||||||| | |     | |||||||||||||||| ||||| ||  ||||| ||| ||||| |||    
T  28152106 ctaataatttgaaaa-atcacataattcagtgtaattacaagtgtcg-----gtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgagg 28152199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 34225864 - 34225824
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  34225864 caactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 3398610 - 3398692
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacac 177  Q
    ||||||||| || || |||||||||||||||| ||| ||||||||| ||||||| |||| | | ||||| || |||||||||||    
T  3398610 tgacacgccgacacagctaataatttgaaaaa-tcatataattcagtgtaattataagtatcggtgtcgtgttggacacgacac 3398692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 147
Target Start/End: Complemental strand, 16388283 - 16388248
Alignment:
Q  112 aataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||||||||||||||||||| |||||||    
T  16388283 aataatttgaaaaaatcacataattcagtgtaatta 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 17302547 - 17302606
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaa-aatcacataattcagagtaattacaagt 152  Q
    ||||||||  || |||||||||||||||||| ||||||||||||||  ||||||||||||    
T  17302547 tgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagt 17302606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 426582 - 426524
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||  |||||||||||||||||||||||||| |  ||||||||||||    
T  426582 tgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagt 426524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 1191752 - 1191710
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||    
T  1191752 ctaataatttgaaaaattcacaaaattcagtgtaattacaagt 1191710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 7938107 - 7938165
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||||| |||||| || ||||||| ||||    
T  7938107 tgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagt 7938165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 216
Target Start/End: Complemental strand, 17327719 - 17327601
Alignment:
Q  98 acgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacg 197  Q
    ||||| || ||||||| | ||||| |||||||||||||| || |||| || | || |   ||||| |||||||||||||||| || || ||  |||||||    
T  17327719 acgccgacacaactaagattttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacgacacgtgtctgacacagggacacg 17327620  T
Q  198 ccaaatccaaggagtgtcc 216  Q
    || ||||| ||||||||||    
T  17327619 cctaatccgaggagtgtcc 17327601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 17435206 - 17435248
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||| ||||||| ||||||||||| ||||||||||||    
T  17435206 ctaataattttaaaaaattacataattcagtgtaattacaagt 17435248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 403915 - 403874
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||| || |||| |||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagt 403874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 4118384 - 4118343
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||| |  ||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagt 4118343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 6665220 - 6665257
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  6665220 ctaataatttgagtaaatcacataattcagagtaatta 6665257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 7151419 - 7151456
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||||||||||||||||||| || |||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaatta 7151456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 9025546 - 9025509
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  9025546 ctaataatttgagaaaatcacataattcagtgtaatta 9025509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 15489787 - 15489742
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||| ||| ||||||  ||||||||||||    
T  15489787 caactaataatttgaaaaaattacacaattcaatgtaattacaagt 15489742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 17341715 - 17341674
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||| ||||||||||||||||| ||||||| ||||    
T  17341715 taataatttgataaaatcacataattcagtgtaattataagt 17341674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 19040359 - 19040396
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  19040359 ctaataatttgagaaaatcacataattcagtgtaatta 19040396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 31429071 - 31429015
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaa-tcacataattcagagtaattacaa 150  Q
    |||||||||| |||| |||||||||| |||||| ||||||||||||| ||||||||||    
T  31429071 tgacacgcca-cccagctaataatttaaaaaaaatcacataattcagtgtaattacaa 31429015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 138
Target Start/End: Original strand, 2117083 - 2117111
Alignment:
Q  110 ctaataatttgaaaaaatcacataattca 138  Q
    |||||||||||||||||||||||||||||    
T  2117083 ctaataatttgaaaaaatcacataattca 2117111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 6349788 - 6349740
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagttttgatg 159  Q
    ||||||||||||||||| ||||||||||  ||||||||| || ||||||    
T  6349788 taataatttgaaaaaattacataattcattgtaattacatgtgttgatg 6349740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 150
Target Start/End: Original strand, 8713987 - 8714027
Alignment:
Q  111 taataatttgaaaa-aatcacataattcagagtaattacaa 150  Q
    |||||||||||||| ||||||||||||||| ||||||||||    
T  8713987 taataatttgaaaaaaatcacataattcagtgtaattacaa 8714027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 21424870 - 21424830
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataa 134  Q
    |||||||||||| |  |||||||||||||||||||||||||    
T  21424870 tgacacgccaacaccgctaataatttgaaaaaatcacataa 21424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 24115915 - 24115871
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattca 138  Q
    ||||||||  || ||||||||||||| ||||||||||||||||||    
T  24115915 tgacacgctgacacaactaataatttcaaaaaatcacataattca 24115871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Complemental strand, 31579276 - 31579240
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  31579276 taataatttgagaaaatcacataattcagtgtaatta 31579240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 162
Target Start/End: Complemental strand, 32511718 - 32511666
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcg 162  Q
    |||||||||| | ||||||||||||||||| ||||||| |||| ||| |||||    
T  32511718 ctaataatttaagaaaatcacataattcagtgtaattataagtgttggtgtcg 32511666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 28918008 - 28918111
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    |||||||||||||||||||||||||||||| |||||||||||| | | |||||    ||||||||||||| ||||| ||  ||||||||| |||||||||    
T  28918008 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcg---tggacacgacacgtgtccgacactgggacacgcctaatccaagg 28918104  T
Q  210 agtgtcc 216  Q
    |||||||    
T  28918105 agtgtcc 28918111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 4987359 - 4987231
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtc------ggacacgacacgtatccgata 187  Q
    ||||||||| || || |||||||||||||||||||||||||||||| |||||||||||| ||| || || |||      ||||||||||||| ||||| |    
T  4987359 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgaca 4987260  T
Q  188 cgaggacacgccaaatccaaggagtgtcc 216  Q
    |  ||||||||| ||||| ||||||||||    
T  4987259 ccgggacacgcctaatccgaggagtgtcc 4987231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 83 - 151
Target Start/End: Original strand, 34910297 - 34910365
Alignment:
Q  83 gacaccggacatgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaag 151  Q
    |||||| |||| |||||||| || ||||||||||||||||||||||||||||||||| |||||||||||    
T  34910297 gacaccagacacgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaag 34910365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 16000084 - 15999961
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc-gagtcggacacgacacgtatccgatacgagg 192  Q
    ||||||||| || ||||||||||||| ||||||| ||||||||||| |||| ||||||| | | |||| ||  || ||||||||||| ||||| ||  ||    
T  16000084 tgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtcggacacgtacacgacacgtgtccgacaccggg 15999985  T
Q  193 acacgccaaatccaaggagtgtcc 216  Q
    ||||||| ||||||||||||||||    
T  15999984 acacgcctaatccaaggagtgtcc 15999961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 94 - 212
Target Start/End: Original strand, 10954943 - 10955056
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgagga 193  Q
    ||||||||| || ||||||||||||||||||||||||||||||||| ||||| |||||| | |     | |||||||||||||||| ||||| ||  |||    
T  10954943 tgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcg-----gtgtcggacacgacacgtgtccgacactggga 10955037  T
Q  194 cacgccaaatccaaggagt 212  Q
    |||||| ||||| ||||||    
T  10955038 cacgcctaatccgaggagt 10955056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 28812492 - 28812564
Alignment:
Q  80 acagacaccggacatgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||| |||||| |||||||| || |||||||||||||||| |||||||||||||||| ||| ||||||||    
T  28812492 acagacaacggacacgacacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagt 28812564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 173
Target Start/End: Complemental strand, 25948939 - 25948876
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacg 173  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||| ||||| ||||||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggacacg 25948876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 14209100 - 14209162
Alignment:
Q  90 gacatgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||| |||||||| || ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  14209100 gacacgacacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagt 14209162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 27505253 - 27505359
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    ||||||||||  ||||||||||||||| || |||||||||||| | | ||||| ||| |||||||||||| ||||| ||  ||||| ||| ||||| |||    
T  27505253 ctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccgggacatgcctaatccgagg 27505352  T
Q  210 agtgtcc 216  Q
    |||||||    
T  27505353 agtgtcc 27505359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 98 - 216
Target Start/End: Original strand, 55401070 - 55401183
Alignment:
Q  98 acgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacg 197  Q
    ||||| || |||||||||||||||||||||||||||||| || |||||||||||| | |     | |||||||||||||||| ||||| ||   ||||||    
T  55401070 acgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg-----gtgtcggacacgacacgtgtccgacaccgagacacg 55401164  T
Q  198 ccaaatccaaggagtgtcc 216  Q
    || ||||| ||||||||||    
T  55401165 cctaatccgaggagtgtcc 55401183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 20503456 - 20503514
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || |||| |||||||||||||||| ||||||||||| ||||||||||||    
T  20503456 tgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagt 20503514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 26508117 - 26508159
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  26508117 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 26508159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 3164077 - 3164020
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcg 167  Q
    |||||||||||||||||||||||||||||| ||||  |||||| ||||||||| ||||    
T  3164077 ctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcgtgtcg 3164020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 25775481 - 25775558
Alignment:
Q  77 gacacagacaccggaca-tgacacgccaacccaactaataatttgaaaa-aatcacataattcagagtaattacaagt 152  Q
    ||||| ||||| ||||| |||||||||||| ||  |||||||||||||| ||||||||||||||| ||||||||||||    
T  25775481 gacacggacactggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagt 25775558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 177
Target Start/End: Original strand, 21479109 - 21479193
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc-gagtcggacacgacac 177  Q
    ||||||||| || || |||||||||||||||||||||| ||||||| |||||||| ||| | | |||| | ||||||||||||||    
T  21479109 tgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtcggtgtcggacacgacac 21479193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 49651838 - 49651778
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggac 170  Q
    |||||||||||||||||||||||||||||  |||||||||||| | | ||||| |||||||    
T  49651838 ctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 14747510 - 14747610
Alignment:
Q  52 actatgaagcacgaatacggatatggacacag-acaccggaca-tgacacgccaacccaactaataatttgaaaa-aatcacataattcagagtaattac 148  Q
    ||||||||||||| ||||||||| |||||| | ||||  |||| ||||||||| || || ||||||||||||||| |||||||||||| || ||||||||    
T  14747510 actatgaagcacggatacggatacggacaccggacac--gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattac 14747607  T
Q  149 aag 151  Q
    |||    
T  14747608 aag 14747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 1509546 - 1509588
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||| || ||||||||||||    
T  1509546 ctaataatttgaaaaaatcacataatttagtgtaattacaagt 1509588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 8587089 - 8587031
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || ||| ||||||||||||||||||||||| || ||||||||||||    
T  8587089 tgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagt 8587031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 10268554 - 10268496
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||  |||||||||||||||||||||||||| || ||||||||||||    
T  10268554 tgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagt 10268496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 11610512 - 11610570
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||| |  |||||||||| ||||||||||||||||||| ||| ||||||||    
T  11610512 tgacacgccaacaccgctaataatttaaaaaaatcacataattcagtgtagttacaagt 11610570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 21257038 - 21256996
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||||||  |||||||||||    
T  21257038 ctaataatttgaaaaaatcacataattcagtataattacaagt 21256996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 51206405 - 51206363
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||| |||| |||||||    
T  51206405 ctaataatttgaaaaaatcacataattcagtgtaaatacaagt 51206363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 7928457 - 7928494
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||||||||||||||||||||| |||||||    
T  7928457 ctaataatttgaaaaaatcacataattcagtgtaatta 7928494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 14979175 - 14979224
Alignment:
Q  97 cacgccaacccaactaataatttgaaaaaatcacataattcagagtaatt 146  Q
    |||||| || || |||||||||||||||||||||||||||||| ||||||    
T  14979175 cacgccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 93 - 150
Target Start/End: Complemental strand, 15796363 - 15796306
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    |||||||||| || ||  ||||||||||||||||||| ||||||||| ||||||||||    
T  15796363 atgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaa 15796306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 41961718 - 41961590
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgag------tcggacacgacacgtatccgata 187  Q
    |||||||||  | |||||||||||||||||| ||||||| |||| | |||||||||||| | | ||||| |      ||||||||||||||| ||||| |    
T  41961718 tgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgaca 41961619  T
Q  188 cgaggacacgccaaatccaaggagtgtcc 216  Q
    |  ||||||||| ||||| || |||||||    
T  41961618 ctgggacacgcctaatccgagaagtgtcc 41961590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 216
Target Start/End: Original strand, 29508450 - 29508558
Alignment:
Q  109 actaataatttgaaaaaatcacataattcagagtaattacaagttttgatg-tcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaa 207  Q
    ||||||||||||||||||||| ||||||||| ||||||| | || | |||| | | ||||||||||||||   ||||| ||  ||||||| | |||||||    
T  29508450 actaataatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccgggacacgtctaatccaa 29508549  T
Q  208 ggagtgtcc 216  Q
    | |||||||    
T  29508550 gaagtgtcc 29508558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 138
Target Start/End: Original strand, 40052323 - 40052367
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattca 138  Q
    ||||||||| || || |||||||||||||||||||||||||||||    
T  40052323 tgacacgccgacacagctaataatttgaaaaaatcacataattca 40052367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 35994806 - 35994748
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||| ||| || || |||||||||||||||| ||||||||||||| ||||||||||||    
T  35994806 atgacaagccgacacagctaataatttgaaaaa-tcacataattcagtgtaattacaagt 35994748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 10335354 - 10335296
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||||||||||||||||||| ||||||| || || |||| |||||||    
T  10335354 tgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagt 10335296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 14216883 - 14216941
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||| | || ||||||||||||| |||| |||| ||||||||| ||||||||||||    
T  14216883 tgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagt 14216941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 14223012 - 14223070
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||| | || ||||||||||||| |||| |||| ||||||||| ||||||||||||    
T  14223012 tgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagt 14223070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 14829681 - 14829738
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || ||||||||||||||| |||||||||||||  ||||||||||||    
T  14829681 tgacacgccgacacagctaataatttgaaaa-atcacataattcatggtaattacaagt 14829738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 14832106 - 14832148
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||| |||  ||||||||||||    
T  14832106 ctaataatttgaaaaaatcacataactcaatgtaattacaagt 14832148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 26492257 - 26492215
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||| | ||||||| ||||||||||||    
T  26492257 ctaataatttgaaaaaatcatacaattcagtgtaattacaagt 26492215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 34185175 - 34185133
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||| ||||||||||| ||||||| ||||||||||||    
T  34185175 ctaataatttcaaaaaatcacacaattcagtgtaattacaagt 34185133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 11251985 - 11252022
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  11251985 ctaataatttgagaaaatcacataattcagtgtaatta 11252022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 16192801 - 16192744
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcgg 168  Q
    ||||||||||| ||||| ||||||||||| ||||||| | || ||||||||| |||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcgg 16192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 137
Target Start/End: Original strand, 24633751 - 24633800
Alignment:
Q  88 cggacatgacacgccaacccaactaataatttgaaaaaatcacataattc 137  Q
    ||||||||||| ||| || | ||||||||||||| |||||||||||||||    
T  24633751 cggacatgacatgccgacaccactaataatttgagaaaatcacataattc 24633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 4201404 - 4201440
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||||||||||||||||| || |||||||    
T  4201404 taataatttgaaaaaatcacataattaagtgtaatta 4201440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 214
Target Start/End: Original strand, 7171520 - 7171607
Alignment:
Q  122 aaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaaggagtgt 214  Q
    |||||||| ||||||| | |||||||||||| |||     | |||||||||||||||| ||||| ||   |||||||| ||||||||||||||    
T  7171520 aaaaatcatataattcggtgtaattacaagtgttg-----gtgtcggacacgacacgtgtccgacaccgcgacacgcctaatccaaggagtgt 7171607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 12703999 - 12704051
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||| || | ||||||||||||| |||| |||||||||||| |||||||    
T  12703999 gacacgccgacaccactaataatttgagaaaagcacataattcagtgtaatta 12704051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 14840358 - 14840306
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||| | | ||||||||| | ||||||||||||||||| |||||||    
T  14840358 gacacgccaacaccattaataatttcagaaaatcacataattcagtgtaatta 14840306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 18426941 - 18426993
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||| || | ||||||||||| ||||||||||||||||| | |||||||    
T  18426941 gacacgccgacaccactaataatttcaaaaaatcacataattcggtgtaatta 18426993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Original strand, 13391 - 13514
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc-gagtcggacacgacacgtatccgatacgagg 192  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||| | |||||||||  | | |||| | |||||||||||||||  || || || |||    
T  13391 tgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacgcgtctgacactagg 13490  T
Q  193 acacgccaaatccaaggagtgtcc 216  Q
    |||| || ||||||||||||||||    
T  13491 acacacctaatccaaggagtgtcc 13514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 21936 - 21813
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc-gagtcggacacgacacgtatccgatacgagg 192  Q
    ||||||||| || ||||||||||||||| ||||||||||||||||| | |||||||||  | | |||| | |||||||||||||||  || || || |||    
T  21936 tgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtcggacacgacacgcgtctgacactagg 21837  T
Q  193 acacgccaaatccaaggagtgtcc 216  Q
    |||| || ||||||||||||||||    
T  21836 acacacctaatccaaggagtgtcc 21813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 152
Target Start/End: Original strand, 14522 - 14579
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||    
T  14522 gacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagt 14579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 30717582 - 30717470
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcg------agtcggacacgacacgtatccgatacgaggacacgccaaat 203  Q
    |||||||||||||||||||||||||||||| |||||||||||| | |||||||       |||||||||||||||| | ||| ||  ||| ||||| |||    
T  30717582 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaat 30717483  T
Q  204 ccaaggagtgtcc 216  Q
    |||||||||||||    
T  30717482 ccaaggagtgtcc 30717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Complemental strand, 19536467 - 19536407
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaa-tcacataattcagagtaattacaagt 152  Q
    |||||||||| || |||||||||||||||||||| ||||||||||||| ||||||||||||    
T  19536467 atgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagt 19536407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 152
Target Start/End: Complemental strand, 21374811 - 21374709
Alignment:
Q  51 aactatgaagcacgaatacggatatggacacag-acaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattac 148  Q
    |||||||||||||| ||||||| | |||||| | |||| ||||| | ||||||| || || |||||||||||||||||| ||||||||||| ||||||||    
T  21374811 aactatgaagcacggatacggacacggacaccggacac-ggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattac 21374713  T
Q  149 aagt 152  Q
    ||||    
T  21374712 aagt 21374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 110 - 216
Target Start/End: Complemental strand, 2438771 - 2438670
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagg 209  Q
    |||||||||| ||||||||||||||||||| |||||||||||| | |     | |||||||||||||| | ||||| ||  ||||||||| ||||| |||    
T  2438771 ctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcg-----gtgtcggacacgacacatgtccgacaccgggacacgcctaatccgagg 2438677  T
Q  210 agtgtcc 216  Q
    |||||||    
T  2438676 agtgtcc 2438670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 15657857 - 15657911
Alignment:
Q  96 acacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    ||||||| || |||||||||||||| |||||||||||||||||| ||||||||||    
T  15657857 acacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaa 15657911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 94 - 216
Target Start/End: Complemental strand, 38117227 - 38117110
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgagga 193  Q
    ||||||||| || || |||||||||||||||||||||||| ||| | |||||||||||| |||     | ||||||||| |||||| ||||| ||  |||    
T  38117227 tgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttg-----gtgtcggacacaacacgtgtccgacaccggga 38117133  T
Q  194 cacgccaaatccaaggagtgtcc 216  Q
    |||||| ||||| ||| ||||||    
T  38117132 cacgcctaatccgaggggtgtcc 38117110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 974751 - 974820
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgaca 176  Q
    |||||||||||||||||| ||||||| |||||| |||||||||||| | | ||||| || ||||||||||    
T  974751 caactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgtgttggacacgaca 974820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 30404901 - 30404860
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||||||||||||||||||||||| ||||||||||||    
T  30404901 taataatttgaaaaaatcacataattcagtgtaattacaagt 30404860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 150
Target Start/End: Complemental strand, 12940990 - 12940947
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||    
T  12940990 caactaataatttgaaaaaatcatataattcagtgtaattacaa 12940947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 12668491 - 12668433
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| ||  |||||||||||||||||||| ||||||||||| ||||||| ||||    
T  12668491 tgacacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagt 12668433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 15972864 - 15972922
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||| ||||||||||||||||| ||| ||||||| ||||||||||||    
T  15972864 tgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagt 15972922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 18421954 - 18422012
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||| ||||||||| |||| |||||||||||||| ||||||||||||    
T  18421954 tgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagt 18422012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 18841081 - 18841023
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||  || ||||||||||||||||||||| |||||||| || ||||||||||||    
T  18841081 tgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagt 18841023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 172
Target Start/End: Original strand, 24894380 - 24894458
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacac 172  Q
    ||||||||| || || |||||||||| ||||||||||||||||||| | ||||| |||| ||| | ||| |||||||||    
T  24894380 tgacacgccgacacagctaataatttaaaaaaatcacataattcagtgcaattaaaagtgttggtttcgtgtcggacac 24894458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 37558968 - 37559026
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || ||||||||||| |||||||||||||||||  ||||||||||||    
T  37558968 tgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagt 37559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 20539783 - 20539684
Alignment:
Q  53 ctatgaagcacgaatacggata-tggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    |||||||||||| ||||||| | ||||||| ||||| ||||| ||||||| | || || |||||||||||||||||||| |||||| || ||||||||||    
T  20539783 ctatgaagcacggatacggacactggacac-gacac-ggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaa 20539686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 28677916 - 28677953
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||||||||||||||||||||| |||||||    
T  28677916 ctaataatttgaaaaaatcacataattcagtgtaatta 28677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 150
Target Start/End: Original strand, 30335411 - 30335464
Alignment:
Q  97 cacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    |||||| || ||||||||||||||||||||| |||||||| || ||||||||||    
T  30335411 cacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaa 30335464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 20473313 - 20473381
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcg 162  Q
    ||||| ||| || ||||||||||||| ||||| ||| ||||||||| |||||||||||| | |||||||    
T  20473313 tgacatgccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtcg 20473381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 37419752 - 37419792
Alignment:
Q  112 aataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||| ||||||| ||||||||||||    
T  37419752 aataatttgaaaaaatcacaaaattcagtgtaattacaagt 37419792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 23058511 - 23058452
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaa-tcacataattcagagtaattacaagt 152  Q
    ||||||||| || ||| |||||||||||||||| ||||||||| ||| ||||||||||||    
T  23058511 tgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagt 23058452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Complemental strand, 4882748 - 4882690
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcgg 168  Q
    ||||| |||||||||||| | ||||||||| |||||||||||| | ||||||| |||||    
T  4882748 ctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcgg 4882690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 11223915 - 11223873
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||| ||||||||||| ||||||||||| ||||||||||||    
T  11223915 ctaatattttgaaaaaataacataattcagtgtaattacaagt 11223873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 33153431 - 33153473
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||| |||| ||||||||||||||||||| ||||||||||||    
T  33153431 ctaatgatttaaaaaaatcacataattcagtgtaattacaagt 33153473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 36756412 - 36756354
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||| | || |||||||||||||||| |||| ||||||||||| ||||||| ||||    
T  36756412 tgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagt 36756354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 39323271 - 39323313
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||    
T  39323271 ctaataatttgacaaaattacataattcagtgtaattacaagt 39323313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 21616769 - 21616806
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  21616769 ctaataatttgagaaaatcacataattcagtgtaatta 21616806  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 21782870 - 21782833
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||||||| ||||||||||||||||| |||||||    
T  21782870 ctaataatttgagaaaatcacataattcagtgtaatta 21782833  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 137
Target Start/End: Original strand, 11670761 - 11670789
Alignment:
Q  109 actaataatttgaaaaaatcacataattc 137  Q
    |||||||||||||||||||||||||||||    
T  11670761 actaataatttgaaaaaatcacataattc 11670789  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 18420502 - 18420458
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattca 138  Q
    |||||||||||| |  |||||||||||| ||||||||||||||||    
T  18420502 tgacacgccaacactgctaataatttgagaaaatcacataattca 18420458  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 24009351 - 24009403
Alignment:
Q  164 gtcggacacgacacgtatccgatacgaggacacgccaaatccaaggagtgtcc 216  Q
    |||||||||||||||| || || ||| |||||||||  |||||||||||||||    
T  24009351 gtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtcc 24009403  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 147
Target Start/End: Original strand, 28412358 - 28412394
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||||| ||||||||||||||||| |||||||    
T  28412358 taataatttgataaaatcacataattcagtgtaatta 28412394  T

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Target: scaffold0223 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 20162 - 20221
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||    
T  20162 atgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagt 20221  T

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Target: scaffold0103 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 51802 - 51860
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||||||||||||||| ||||||||||||    
T  51802 tgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagt 51860  T

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Target: scaffold0018 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 94 - 152
Target Start/End: Complemental strand, 178887 - 178828
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatca-cataattcagagtaattacaagt 152  Q
    ||||||||| || ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  178887 tgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagt 178828  T

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Target: scaffold0027 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 150
Target Start/End: Original strand, 46672 - 46729
Alignment:
Q  93 atgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    |||||||||| || ||  ||||||||||||||||||||||||||||| ||||||||||    
T  46672 atgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattacaa 46729  T

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Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 152
Target Start/End: Complemental strand, 17804 - 17759
Alignment:
Q  107 caactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||||||||||| || ||||||||||||    
T  17804 caactaataatttgaaaaaatcacataatttagtgtaattacaagt 17759  T

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Target: scaffold0246 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 19567 - 19657
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagttttgatgtc-gagtcggacacgacacgtatccga 185  Q
    ||||||||| |  |||||||||||||||||| |||||||||||||| |||||||||||| || ||||| | || ||||||||||||| |||||    
T  19567 tgacacgccgatacaactaataatttgaaaa-atcacataattcagtgtaattacaagtgtt-atgtcggtgttggacacgacacgtgtccga 19657  T

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Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 33430 - 33375
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    |||||||| || || |||||||||||||||||| ||||||||||| ||||||||||    
T  33430 gacacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

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Target: scaffold0652 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 514 - 472
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||||||||||||| ||||||| ||||||||||||    
T  514 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagt 472  T

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Target: scaffold0793 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 216
Target Start/End: Complemental strand, 4924 - 4832
Alignment:
Q  121 aaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaaggagtgtcc 216  Q
    ||||||||||||||||||| |||||||||||| ||| ||||   | | ||||||||| | ||||| ||  ||||||||| ||||| ||||||||||    
T  4924 aaaaaatcacataattcagtgtaattacaagtgttggtgtc---ttgtacacgacacatgtccgacacagggacacgcctaatccgaggagtgtcc 4832  T

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Target: scaffold0227 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 7378 - 7321
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||| || |||||||||||||| ||||||||||||||| || ||||||| ||||    
T  7378 gacacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagt 7321  T

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Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 23371 - 23494
Alignment:
Q  53 ctatgaagcacgaatacggatatggacacagacaccggaca-tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaag 151  Q
    |||||||||||| ||||||| | |||||| ||||| | ||| ||||||||| || ||  |||||| |  ||||||||||||||||||| ||||||| |||    
T  23371 ctatgaagcacggatacggacacggacac-gacacag-acactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataag 23468  T
Q  152 ttttgatgtcgagtcggacacgacac 177  Q
    | | | ||||| ||||||||||||||    
T  23469 tgtcggtgtcgtgtcggacacgacac 23494  T

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Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 3900 - 3859
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagt 3859  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 130490 - 130531
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  130490 taatagtttgaaaaaatcacataattcagtgtaattacaagt 130531  T

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Target: scaffold0122 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 147
Target Start/End: Original strand, 8002 - 8054
Alignment:
Q  95 gacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    |||||||| || ||||||||||||||||||||||| ||||| ||| |||||||    
T  8002 gacacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta 8054  T

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Target: scaffold0050 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 70286 - 70384
Alignment:
Q  111 taataatttgaaaaaatcacataattcagagtaattacaagttttgatgtcgagtcggacacgacacgtatccgatacgaggacacgccaaatccaagga 210  Q
    ||||||||||||||||| ||||||||||| ||||||| |||| | |     | |||||||||||||||| ||||| || |||||| ||| ||||| | ||    
T  70286 taataatttgaaaaaataacataattcagtgtaattataagtgtcg-----gtgtcggacacgacacgtgtccgacaccaggacatgcctaatccgatga 70380  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 123616 - 123677
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaa---tcacataattcagagtaattacaagt 152  Q
    |||||||||||| || |||||||||| ||||||   ||||||||||||| ||||||||||||    
T  123616 tgacacgccaacacagctaataatttaaaaaaagaatcacataattcagtgtaattacaagt 123677  T

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Target: scaffold0004; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 92814 - 92856
Alignment:
Q  110 ctaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||    
T  92814 ctaataatttgagaaaattacataattcagtgtaattacaagt 92856  T

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Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 94 - 152
Target Start/End: Original strand, 8789 - 8847
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    ||||||||| || || |||||||||||||||||||| || ||| || ||||||||||||    
T  8789 tgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagt 8847  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 23777 - 23819
Alignment:
Q  111 taataatttgaaaa-aatcacataattcagagtaattacaagt 152  Q
    |||||||||||||| ||||||||||||||| ||||||||||||    
T  23777 taataatttgaaaaaaatcacataattcagtgtaattacaagt 23819  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 241585 - 241638
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaatta 147  Q
    ||||||||| || || ||||||||||| ||||||||||||||| || |||||||    
T  241585 tgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaatta 241638  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 8703 - 8647
Alignment:
Q  94 tgacacgccaacccaactaataatttgaaaaaatcacataattcagagtaattacaa 150  Q
    ||||| ||| || |||||||||||||||||| |||||||||||| |  |||||||||    
T  8703 tgacatgccgacacaactaataatttgaaaatatcacataattcggtataattacaa 8647  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 53189 - 53229
Alignment:
Q  112 aataatttgaaaaaatcacataattcagagtaattacaagt 152  Q
    |||||||||| ||||||||||||||||| ||||||| ||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagt 53229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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