View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4453-Insertion-3 (Length: 422)
Name: NF4453-Insertion-3
Description: NF4453
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4453-Insertion-3 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 380; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 380; E-Value: 0
Query Start/End: Original strand, 7 - 422
Target Start/End: Original strand, 41776573 - 41776989
Alignment:
| Q |
7 |
aacattagcactaagctttaaaaaatgagtaccatctaacgaacaatggaataataacccgagacctagacaagtttcacagttgccttagcagttaaat |
106 |
Q |
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| T |
41776573 |
aacattagcactaagctttaaaaaatgagtaccatctaacgaacaatggaataataacccgagacctagacaagtttcacagttgccttaggagttaaat |
41776672 |
T |
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| Q |
107 |
aatttaaacatgaagaaacataatcctcttcctaattaaatgaccatg-atggcatatattacaggtnnnnnnnctgtaaagaaattcagttgagcatta |
205 |
Q |
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| T |
41776673 |
aatttaaacatgaagaaacataatcctcttcctaattaaatgaccgtggatggcatatattacaggtaaaaaaactgtaaagaaattcagttgagcatta |
41776772 |
T |
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| Q |
206 |
cctgaaacgactgttagaatcctgaaaagaacagcttgaagtaggcgttgttccagatgcataaccatcggcattcaaagaaccagtctcagctttctgg |
305 |
Q |
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| T |
41776773 |
cctgaaacgactgttagaatcctgaaaagaacagcttgaagtaggcgttgttccagatgcataaccatcggcattcaaagaaccagtctcagctttctgg |
41776872 |
T |
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| Q |
306 |
tttaaagatgatggtagaatcttatcatgatcaacacccttagagaatctctgagcaaaactcttaggctgaggatgagggagatcacaattttcaacat |
405 |
Q |
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| T |
41776873 |
tttaaagatgatggtagaatcttatcatgatcaacacccttagagaatctctgagcaaaactcttaggctgaggatgagggagatcacaattttcaacat |
41776972 |
T |
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| Q |
406 |
gctcaacagatctctga |
422 |
Q |
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| T |
41776973 |
gctcaacagatctctga |
41776989 |
T |
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