View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4454-Insertion-3 (Length: 627)

Name: NF4454-Insertion-3
Description: NF4454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4454-Insertion-3
NF4454-Insertion-3
[»] chr4 (68 HSPs)
chr4 (7-363)||(48170395-48170751)
chr4 (191-542)||(48147365-48147716)
chr4 (105-624)||(48852656-48853166)
chr4 (356-568)||(48156055-48156267)
chr4 (436-565)||(7790383-7790512)
chr4 (436-624)||(45365796-45365978)
chr4 (436-555)||(7773464-7773583)
chr4 (436-565)||(7771698-7771827)
chr4 (437-558)||(7237379-7237500)
chr4 (112-623)||(45371651-45372156)
chr4 (14-119)||(33133864-33133978)
chr4 (428-565)||(50666610-50666747)
chr4 (494-565)||(7908663-7908734)
chr4 (493-564)||(48864395-48864466)
chr4 (430-543)||(48903255-48903365)
chr4 (493-555)||(7878743-7878805)
chr4 (105-235)||(48891405-48891532)
chr4 (493-577)||(49043785-49043869)
chr4 (436-566)||(45384520-45384656)
chr4 (494-620)||(47208238-47208358)
chr4 (494-564)||(7813838-7813908)
chr4 (436-565)||(37826619-37826748)
chr4 (436-565)||(48870863-48870992)
chr4 (436-565)||(48876167-48876296)
chr4 (436-565)||(48886549-48886678)
chr4 (493-554)||(49038518-49038579)
chr4 (494-558)||(7786825-7786889)
chr4 (16-68)||(48852576-48852628)
chr4 (110-157)||(48870537-48870584)
chr4 (110-157)||(48886223-48886270)
chr4 (436-558)||(7765945-7766067)
chr4 (494-564)||(7800998-7801068)
chr4 (14-64)||(48898630-48898680)
chr4 (112-166)||(48898701-48898755)
chr4 (493-565)||(48863625-48863697)
chr4 (11-63)||(48870450-48870502)
chr4 (11-63)||(48875754-48875806)
chr4 (11-63)||(48886136-48886188)
chr4 (356-576)||(48898963-48899183)
chr4 (17-68)||(48891326-48891377)
chr4 (198-389)||(49043994-49044185)
chr4 (16-63)||(49044311-49044358)
chr4 (113-235)||(7877727-7877848)
chr4 (436-474)||(7878049-7878087)
chr4 (107-177)||(50669047-50669117)
chr4 (429-574)||(48735031-48735176)
chr4 (11-64)||(48863137-48863190)
chr4 (304-409)||(48870722-48870827)
chr4 (304-409)||(48886408-48886513)
chr4 (108-148)||(48156469-48156509)
chr4 (493-565)||(49040781-49040853)
chr4 (112-159)||(48147754-48147801)
chr4 (304-407)||(48705169-48705272)
chr4 (302-409)||(48876024-48876131)
chr4 (17-68)||(50668966-50669017)
chr4 (10-64)||(45372183-45372237)
chr4 (351-409)||(47208126-47208184)
chr4 (493-575)||(49048174-49048256)
chr4 (13-63)||(49048699-49048749)
chr4 (11-61)||(50250907-50250957)
chr4 (105-146)||(43596485-43596526)
chr4 (112-157)||(48875843-48875888)
chr4 (107-147)||(7813469-7813509)
chr4 (107-147)||(7822958-7822998)
chr4 (496-564)||(7823332-7823400)
chr4 (11-63)||(37827109-37827161)
chr4 (345-446)||(48861475-48861580)
chr4 (494-542)||(48861649-48861697)
[»] chr3 (8 HSPs)
chr3 (244-573)||(47451521-47451850)
chr3 (361-568)||(11005554-11005755)
chr3 (361-565)||(11015120-11015318)
chr3 (258-564)||(11024133-11024433)
chr3 (108-171)||(11005978-11006041)
chr3 (108-171)||(11024553-11024616)
chr3 (112-166)||(11015546-11015600)
chr3 (11-63)||(47452022-47452074)
[»] chr5 (5 HSPs)
chr5 (428-552)||(9120058-9120182)
chr5 (439-537)||(179364-179462)
chr5 (492-561)||(42561966-42562035)
chr5 (10-68)||(42562441-42562499)
chr5 (345-398)||(29688341-29688394)
[»] chr8 (13 HSPs)
chr8 (436-530)||(4962183-4962277)
chr8 (351-565)||(15349101-15349315)
chr8 (436-563)||(12195627-12195754)
chr8 (436-563)||(12440055-12440182)
chr8 (253-387)||(4031710-4031844)
chr8 (436-562)||(12200645-12200771)
chr8 (436-562)||(12445073-12445199)
chr8 (493-542)||(4031578-4031627)
chr8 (116-225)||(15348857-15348966)
chr8 (585-624)||(4030364-4030403)
chr8 (588-624)||(4962095-4962131)
chr8 (588-624)||(12200788-12200824)
chr8 (588-624)||(12445216-12445252)
[»] chr6 (4 HSPs)
chr6 (11-64)||(21015714-21015767)
chr6 (205-542)||(21015899-21016230)
chr6 (436-538)||(21979284-21979386)
chr6 (502-540)||(14197337-14197375)
[»] chr1 (9 HSPs)
chr1 (502-555)||(24323139-24323192)
chr1 (493-554)||(24416138-24416199)
chr1 (493-555)||(24340771-24340833)
chr1 (493-555)||(24353136-24353198)
chr1 (502-554)||(24367534-24367586)
chr1 (493-552)||(24310576-24310635)
chr1 (17-55)||(24310097-24310135)
chr1 (522-564)||(24369830-24369872)
chr1 (18-55)||(24322389-24322426)
[»] chr7 (3 HSPs)
chr7 (493-556)||(48884184-48884247)
chr7 (502-540)||(30130916-30130954)
chr7 (10-54)||(30120435-30120479)


Alignment Details
Target: chr4 (Bit Score: 325; Significance: 0; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 7 - 363
Target Start/End: Complemental strand, 48170751 - 48170395
Alignment:
Q  7 agtttctacctatggaatccatccacccgagttcataaacaaatacctttgtctcctattgaattaaatccagattttgtaaatgcatacgattgctttt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||| ||||||||||    
T  48170751 agtttctacctatggaatccatccacccgagttcataaacaaatacctttgtctcctattgaattaaatgcagatgttgtagatgcatatgattgctttt 48170652  T
Q  107 atctatatggttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcctgtgatccaaccttagtttattgttattcgcgtttggaatt 206  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48170651 atctatatggttttgggtatgatcagttaagagatgattacttagtggtttcagtgtcctgtgatccaaccttagttcattgttattcgcgtttggaatt 48170552  T
Q  207 tttctcattaagagataatacctggaaagtactagggggtactcgcttcccttatatgaatgactatgatgatcccagagtagggtcactttttaacggg 306  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48170551 tttctcattaagagataatacctggaaagtactagagggtactcgcttcccttatatgaatgactatgatgatcccagagtagggtcactttttaacggg 48170452  T
Q  307 gttattcattggttagcctatcatcatgatttagtgaagaatgctattcttgcattt 363  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  48170451 gttattcattggttagcttatcatcatgatttagtgaagaatgctattcttgcattt 48170395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 191 - 542
Target Start/End: Complemental strand, 48147716 - 48147365
Alignment:
Q  191 attcgcgtttggaatttttctcattaagagataatacctggaaagtactagggggtactcgcttcccttatatgaatgactatgatgatcccagagtagg 290  Q
    ||||||| ||||| |||||||| || ||||||| ||  ||||||| ||| | ||||||||  ||||||||||||  | ||  |||||| |  ||||||||    
T  48147716 attcgcgattggagtttttctcgttgagagatagtatgtggaaagaacttgagggtactccgttcccttatatgctttaccctgatgagcatagagtagg 48147617  T
Q  291 gtcactttttaacggggttattcattggttagcctatcatcatgatttagtgaagaatgctattcttgcatttgatttaacggaaaggaaacttttagag 390  Q
    |||||||||||  |||| |||||||||||| || | |||  |||||||||  | | ||| |||| ||||||||||||||| |||||||| ||||||||||    
T  48147616 gtcactttttagtggggctattcattggttggcttttcacaatgatttagcaagggatgttattattgcatttgatttaatggaaaggagacttttagag 48147517  T
Q  391 atgccttttctagatgattctggccatgaaattgaatattgtgagttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgta 490  Q
    |||||||||| ||||| || ||||| ||||  ||||||| || | ||||||||||||||| ||||||| ||||||  || ||||||| |||  ||| | |    
T  48147516 atgccttttccagatggttttggccttgaatctgaatatagtcatttgtgggtatttggacaatttctcagtctaacgggtatggatcatgacaatagca 48147417  T
Q  491 gtgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaa 542  Q
    | |||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  48147416 gagttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggactaa 48147365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 105 - 624
Target Start/End: Original strand, 48852656 - 48853166
Alignment:
Q  105 ttatctatatggttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcctgtgatccaaccttagtttattgttattcgcgtttggaa 204  Q
    |||||||||||||||||||||||| | || ||  ||||||||||  || |||| | |||||| |||| ||||||||| | ||  ||  || | ||| ||     
T  48852656 ttatctatatggttttgggtatgacccgtcaaccgatgattacttggtagttttaatgtcctatgatacaaccttagctaatgtttcatcacatttagag 48852755  T
Q  205 tttttctcattaagagataatacctggaaagtactagggggtactcgcttcccttatatgaatgactatgatgatcccagagtagggtcactttttaacg 304  Q
    ||||||||||| |||| |||| | ||||||| | | | |||||||| ||||||||| ||||||| ||  |||||||||||||||||||| |||||||| |    
T  48852756 tttttctcattgagagctaatgcatggaaagaaattgagggtactcacttcccttacatgaatgcctccgatgatcccagagtagggtcgctttttaatg 48852855  T
Q  305 gggttattcattggttagcctatcatcatgattt---agtgaagaatgctattcttgcatttgatttaacggaaaggaaacttttagagatgccttttct 401  Q
    ||| |||||||||||| || | || |||||||||   | |||| |||| |||| | || |||||||||| ||||||||||||||||||| || |||| |     
T  48852856 gggctattcattggttggcttttcgtcatgatttaccaatgaataatgttattgtggcctttgatttaatggaaaggaaacttttagagttgtctttgcc 48852955  T
Q  402 agatgattctggccatgaaattgaatattgtgagttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatt 501  Q
     ||||||| |  |||||||  |   ||||| || |||||||||||| |||||||||| ||| ||||||  |||      ||  ||  ||  ||||||||     
T  48852956 ggatgatttttaccatgaacctacctattgcgatttgtgggtatttagagaatttctaagtatatgggtcatg------ggggatgatacagttgaaata 48853049  T
Q  502 tgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgatggcactcccactcccacttggtacttttccccaatat 601  Q
    ||||| ||||||||||||||||||| ||| |||||||||||  ||||||||||| || ||      | | ||| |||||||   ||||||||||||||||    
T  48853050 tgggtcatgaaagaatacaaagtgcgttcgtcttggactaagactcttgttctttctttt------agttccattcccactcactacttttccccaatat 48853143  T
Q  602 gctctacaaaaagtggtgatatt 624  Q
    | | |||||| ||||||||||||    
T  48853144 gttgtacaaagagtggtgatatt 48853166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 356 - 568
Target Start/End: Complemental strand, 48156267 - 48156055
Alignment:
Q  356 ttgcatttgatttaacggaaaggaaacttttagagatgccttttctagatgattctggccatgaaattgaatattgtgagttgtgggtatttggagaatt 455  Q
    ||||||||||||||| |||  ||||||||||||||||||||||||  |||| || |  ||||  || |||  ||||| | ||||||||||||||||||||    
T  48156267 ttgcatttgatttaatggatcggaaacttttagagatgccttttcctgatggttttcaccatacaactgataattgtaatttgtgggtatttggagaatt 48156168  T
Q  456 tcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttctt 555  Q
    ||| ||| |||||||| | ||||  | ||||   || |||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||| |||    
T  48156167 tctcagtttatgggctgttgattgggctaatgaaagagttgaaatatgggtgatgaacgaatacaaagtgcattcttcttggactaaaactcttgtcctt 48156068  T
Q  556 cctattgatggca 568  Q
    |||||||||||||    
T  48156067 cctattgatggca 48156055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 436 - 565
Target Start/End: Original strand, 7790383 - 7790512
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    ||||||||||||||||||||||| ||| |||| |||| |||||||| ||||  ||   ||||||| ||||||||||||||||||||||||||||| ||||    
T  7790383 ttgtgggtatttggagaatttctcagtttatgcgctaaggattatgataatgatacaattgaaatatgggtgatgaaagaatacaaagtgcattcgtctt 7790482  T
Q  536 ggactaaagctcttgttcttcctattgatg 565  Q
    |||||||| ||||||||||| |||||||||    
T  7790483 ggactaaaactcttgttctttctattgatg 7790512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 436 - 624
Target Start/End: Complemental strand, 45365978 - 45365796
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    ||||||||||||||||||||| | ||| | |||||||||||||||| ||||  ||  |||||||| ||||||||||||||||| ||||||| ||| ||||    
T  45365978 ttgtgggtatttggagaatttttcagtttttgggctatggattatgataatgatacagttgaaatatgggtgatgaaagaatataaagtgcgttcgtctt 45365879  T
Q  536 ggactaaagctcttgttcttcctattgatggcactcccactcccacttggtacttttccccaatatgctctacaaaaagtggtgatatt 624  Q
    |||| ||  |||  ||||||||||||||||||| ||||||||        |||||||||||  |||||||||||||||| |||||||||    
T  45365878 ggacaaagactcacgttcttcctattgatggcattcccactc------aatacttttcccctttatgctctacaaaaagcggtgatatt 45365796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 436 - 555
Target Start/End: Complemental strand, 7773583 - 7773464
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    ||||||||||||||||||| ||||||| ||||||||| |||| ||| ||||  ||  |||||||| ||||||||||||||||||||||||||||| ||||    
T  7773583 ttgtgggtatttggagaatatcttagtgtatgggctaaggataatgctaatgatacagttgaaatatgggtgatgaaagaatacaaagtgcattcgtctt 7773484  T
Q  536 ggactaaagctcttgttctt 555  Q
    ||| |||| |||||||||||    
T  7773483 ggattaaatctcttgttctt 7773464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 436 - 565
Target Start/End: Original strand, 7771698 - 7771827
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    ||||||||||||||||||||||| ||| |||| |||| |||||||| ||||  ||   ||| ||| ||||||||||||||||||||||||||||| || |    
T  7771698 ttgtgggtatttggagaatttctcagtttatgcgctaaggattatgataatgatacaattgtaatatgggtgatgaaagaatacaaagtgcattcgtcat 7771797  T
Q  536 ggactaaagctcttgttcttcctattgatg 565  Q
    |||||||| ||||||||||| || ||||||    
T  7771798 ggactaaaactcttgttctttctgttgatg 7771827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 437 - 558
Target Start/End: Complemental strand, 7237500 - 7237379
Alignment:
Q  437 tgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttg 536  Q
    |||||||||||||||||||||| ||||||||||||  |||||||| ||||  ||   ||| ||| ||||||||||||||||||||| ||||||| | |||    
T  7237500 tgtgggtatttggagaatttctcagtctatgggctcaggattatgataatgatacaattgtaatatgggtgatgaaagaatacaaaatgcattcgttttg 7237401  T
Q  537 gactaaagctcttgttcttcct 558  Q
    ||||||| ||||||| ||||||    
T  7237400 gactaaaactcttgtgcttcct 7237379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 112 - 623
Target Start/End: Complemental strand, 45372156 - 45371651
Alignment:
Q  112 tatggttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcctgtgatccaaccttagttta---ttgttattcgcgtttggaatttt 208  Q
    ||||| |||||||||||| ||||||||||||||||||  ||||||||||| | || || | ||||  ||| | |   |  | |||| | |||||| ||||    
T  45372156 tatggatttgggtatgatgagttaagagatgattacttggtggtttcagtctactatgttacaacagtagatgaggatgatgattcacatttggagtttt 45372057  T
Q  209 tctcattaagagataatacctggaaagtactagggggtactcgcttcccttatatgaatgactatga---tgatcccagagtagggtcactttttaacgg 305  Q
    ||||||| ||||||||||| |||| || ||| | |||||||| |||||||||| |||| |   ||||   ||| || |||| ||||||  |  |||| ||    
T  45372056 tctcattgagagataatacttggagagaacttgagggtactcacttcccttatttgaacgctaatgaatttgaacctagaggagggtccttccttaatgg 45371957  T
Q  306 ggttattcattggttagcctatcatcatgatttagtgaagaatgctattcttgcatttgatttaacggaaaggaaacttttagagatgccttttctagat 405  Q
    || |||| |||||||  | | || ||||||||||  || || || ||||||||| |||||||||| |||| ||||||||||||||||| |||| |  |||    
T  45371956 ggctatttattggttgtcttttcgtcatgatttatcgatgagtgttattcttgcctttgatttaatggaacggaaacttttagagatgtctttgcctgat 45371857  T
Q  406 gattctggccatgaaattgaatattgtgagttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttggg 505  Q
    | || || || ||    |  ||||||||| || |||||||| ||| ||||||| ||||| ||||||| | |  | | ||        |||||||| ||||    
T  45371856 ggttttgaccctggtcctacatattgtgatttttgggtattcggaaaatttctcagtctttgggctaagaaggaagataca------gttgaaatatggg 45371763  T
Q  506 tgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgatggcactcccactcccacttggtacttttccccaatatgctc 605  Q
    | ||||||||||||||||||||||| |||||||||||  || ||||||||||||| ||||||  ||| ||||      |||||||||||||| | || |     
T  45371762 ttatgaaagaatacaaagtgcattcgtcttggactaagacttttgttcttcctatcgatggcgttccaactc------ggtacttttccccattgtgttg 45371669  T
Q  606 tacaaaaagtggtgatat 623  Q
    ||||||||| ||||||||    
T  45371668 tacaaaaagcggtgatat 45371651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 14 - 119
Target Start/End: Complemental strand, 33133978 - 33133864
Alignment:
Q  14 acctatggaatccatccacccgagttcataaacaaatacctttgtctcctattgaattaaatccaga---------ttttgtaaatgcatacgattgctt 104  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||  |||         | ||||| ||||||| ||||||||    
T  33133978 acctatggaatccattcacccgagttcataaacaaatacctttgtctccaattgaattaaatgtagatgttgtagctgttgtagatgcatatgattgctt 33133879  T
Q  105 ttatctatatggttt 119  Q
    |||||||||||||||    
T  33133878 ttatctatatggttt 33133864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 428 - 565
Target Start/End: Original strand, 50666610 - 50666747
Alignment:
Q  428 attgtgagttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgca 527  Q
    ||||||| |||||||||||| |||| ||||||| | ||| |||||| |||||||  |||  ||   ||||| | ||||||||| ||||||||||||||||    
T  50666610 attgtgatttgtgggtatttagagagtttcttaatttatcggctattgattatgtgaatgatacaattgaattatgggtgatgtaagaatacaaagtgca 50666709  T
Q  528 ttcatcttggactaaagctcttgttcttcctattgatg 565  Q
    |||||||||||||||| |||||||| |||  |||||||    
T  50666710 ttcatcttggactaaaactcttgttattcacattgatg 50666747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 494 - 565
Target Start/End: Original strand, 7908663 - 7908734
Alignment:
Q  494 ttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgatg 565  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||| || ||||||    
T  7908663 ttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggaataaaactcttgttctttctgttgatg 7908734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 493 - 564
Target Start/End: Original strand, 48864395 - 48864466
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgat 564  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||    
T  48864395 gttgaaatatgggtgatgaaagaatacaaagtgcattcgtcttggactaagattcttgttcttcctattgat 48864466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 430 - 543
Target Start/End: Original strand, 48903255 - 48903365
Alignment:
Q  430 tgtgagttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcatt 529  Q
    ||||| || ||||||||||||||||||||||| ||||||||| ||||||| | ||||   |   ||||||| ||||||||||||||||||||||||||||    
T  48903255 tgtgatttatgggtatttggagaatttcttagcctatgggctttggattacgataat---aaatttgaaatatgggtgatgaaagaatacaaagtgcatt 48903351  T
Q  530 catcttggactaaa 543  Q
      ||||||||||||    
T  48903352 tgtcttggactaaa 48903365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 493 - 555
Target Start/End: Original strand, 7878743 - 7878805
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttctt 555  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  7878743 gttgaaatatgggtgatgaaagaatacaaagtgcattcatcttggattaaaactcttgttctt 7878805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 105 - 235
Target Start/End: Original strand, 48891405 - 48891532
Alignment:
Q  105 ttatctatatggttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcctgtgatccaaccttagtttattgttattcgcgtttggaa 204  Q
    |||||||||||||||| |||||||   ||||||||||||||| |  |||||||||||||||| |||| ||||||||| |  |  | || ||||||||||     
T  48891405 ttatctatatggttttaggtatga---gttaagagatgattagttggtggtttcagtgtcctatgatacaaccttagatggtaatcatccgcgtttggag 48891501  T
Q  205 tttttctcattaagagataatacctggaaag 235  Q
    ||||||||||| ||||||||||  |||||||    
T  48891502 tttttctcattgagagataatatgtggaaag 48891532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 493 - 577
Target Start/End: Complemental strand, 49043869 - 49043785
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgatggcactcccactc 577  Q
    |||||||| ||||||||||||||||||||||||||||| || ||||||||  |||||||| || ||||||||| || ||||||||    
T  49043869 gttgaaatatgggtgatgaaagaatacaaagtgcattcgtcatggactaagactcttgttttttctattgatgtcattcccactc 49043785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 436 - 566
Target Start/End: Complemental strand, 45384656 - 45384520
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagt------gttgaaatttgggtgatgaaagaatacaaagtgcatt 529  Q
    ||||||||||||||||||||||| ||| | || |||||| |||||| ||||  || |      |||||||| ||||||||||||||||| ||||||||||    
T  45384656 ttgtgggtatttggagaatttctcagtttttgagctatgcattatgataatattaatatttcagttgaaatatgggtgatgaaagaatataaagtgcatt 45384557  T
Q  530 catcttggactaaagctcttgttcttcctattgatgg 566  Q
    | |||||||| ||  ||| |||||||||| |||||||    
T  45384556 cgtcttggacaaagactcgtgttcttccttttgatgg 45384520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 494 - 620
Target Start/End: Original strand, 47208238 - 47208358
Alignment:
Q  494 ttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgatggcactcccactcccacttggtacttttc 593  Q
    |||||||  |||||||||||||||||||||| || |||||||||||||||| |||| ||||| || |||||| ||  ||| |||      ||||||||      
T  47208238 ttgaaataagggtgatgaaagaatacaaagtacaatcatcttggactaaagttcttattctttctcttgatgtcaacccctctc------ggtactttat 47208331  T
Q  594 cccaatatgctctacaaaaagtggtga 620  Q
    ||||||||| |||||||||||||||||    
T  47208332 cccaatatgttctacaaaaagtggtga 47208358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 494 - 564
Target Start/End: Original strand, 7813838 - 7813908
Alignment:
Q  494 ttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgat 564  Q
    ||||||| |||||| |||||||||||||||||||||| ||||||| |||| ||||||||||| || |||||    
T  7813838 ttgaaatatgggtgttgaaagaatacaaagtgcattcgtcttggaataaaactcttgttctttctgttgat 7813908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 565
Target Start/End: Complemental strand, 37826748 - 37826619
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    ||||||||||||||||||||||||||||||||||| ||||    |  ||||| ||   || || |  |||||||||||||||||||| ||||||| ||||    
T  37826748 ttgtgggtatttggagaatttcttagtctatgggccatgggcagttataatcatacacttaaattacgggtgatgaaagaatacaaactgcattcgtctt 37826649  T
Q  536 ggactaaagctcttgttcttcctattgatg 565  Q
    |||||||  |||||||| |||  |||||||    
T  37826648 ggactaagactcttgttgttcggattgatg 37826619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 565
Target Start/End: Original strand, 48870863 - 48870992
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    |||||||||||||| |||||||| |||||||  ||||||||||||  | ||  ||   ||||||| ||||||||||| |||||||||||| | || ||||    
T  48870863 ttgtgggtatttggggaatttctcagtctatatgctatggattataatgataatacaattgaaatgtgggtgatgaatgaatacaaagtgaactcgtctt 48870962  T
Q  536 ggactaaagctcttgttcttcctattgatg 565  Q
    |||| ||  ||||||||||| || ||||||    
T  48870963 ggacaaagactcttgttctttctgttgatg 48870992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 565
Target Start/End: Original strand, 48876167 - 48876296
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    |||||||||||||| |||||||| |||||||  ||||||||||||  | ||  ||   ||||||| ||||||||||| |||||||||||| | || ||||    
T  48876167 ttgtgggtatttggggaatttctcagtctatatgctatggattataatgataatacaattgaaatgtgggtgatgaatgaatacaaagtgaactcgtctt 48876266  T
Q  536 ggactaaagctcttgttcttcctattgatg 565  Q
    |||| ||  ||||||||||| || ||||||    
T  48876267 ggacaaagactcttgttctttctgttgatg 48876296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 565
Target Start/End: Original strand, 48886549 - 48886678
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    |||||||||||||| |||||||| |||||||  ||||||||||||  | ||  ||   ||||||| ||||||||||| |||||||||||| | || ||||    
T  48886549 ttgtgggtatttggggaatttctcagtctatatgctatggattataatgataatacaattgaaatgtgggtgatgaatgaatacaaagtgaactcgtctt 48886648  T
Q  536 ggactaaagctcttgttcttcctattgatg 565  Q
    |||| ||  ||||||||||| || ||||||    
T  48886649 ggacaaagactcttgttctttctgttgatg 48886678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 493 - 554
Target Start/End: Complemental strand, 49038579 - 49038518
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttct 554  Q
    |||||||| ||||||||||||||||||||||| ||||| |||||||||||  ||||||||||    
T  49038579 gttgaaatatgggtgatgaaagaatacaaagttcattcgtcttggactaagactcttgttct 49038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 494 - 558
Target Start/End: Original strand, 7786825 - 7786889
Alignment:
Q  494 ttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcct 558  Q
    ||||||| |||||||||||||||||||| ||||||| |||||||| |||  ||||||||||||||    
T  7786825 ttgaaatatgggtgatgaaagaatacaacgtgcatttatcttggaataagactcttgttcttcct 7786889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 48852576 - 48852628
Alignment:
Q  16 ctatggaatccatccacccgagttcataaacaaatacctttgtctcctattga 68  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  48852576 ctatggaatccatccaccggagttcacaaacaaatacctttgtctcccattga 48852628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 48870537 - 48870584
Alignment:
Q  110 tatatggttttgggtatgatcagttaagagatgattactcagtggttt 157  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  48870537 tatatggttttgggtatgatcagttaacagatgattacttagtggttt 48870584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 48886223 - 48886270
Alignment:
Q  110 tatatggttttgggtatgatcagttaagagatgattactcagtggttt 157  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  48886223 tatatggttttgggtatgatcagttaacagatgattacttagtggttt 48886270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 436 - 558
Target Start/End: Original strand, 7765945 - 7766067
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    |||||||||| |||||||||||| ||| |||||| || ||||  |  ||||  ||   ||||||| |||||||||||||||||||||||| |||| || |    
T  7765945 ttgtgggtatctggagaatttctcagtatatgggttaaggatactactaatgatacaattgaaatatgggtgatgaaagaatacaaagtgtattcgtcat 7766044  T
Q  536 ggactaaagctcttgttcttcct 558  Q
    |||||||  | ||||||||||||    
T  7766045 ggactaagacacttgttcttcct 7766067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 564
Target Start/End: Original strand, 7800998 - 7801068
Alignment:
Q  494 ttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgat 564  Q
    ||||||| |||||| ||||||| |||||||||||||| ||||||| |||| ||||||||||| || |||||    
T  7800998 ttgaaatatgggtgttgaaagattacaaagtgcattcgtcttggaataaaactcttgttctttctgttgat 7801068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 48898630 - 48898680
Alignment:
Q  14 acctatggaatccatccacccgagttcataaacaaatacctttgtctccta 64  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  48898630 acctatggaatccatccaccggagctcacaaacaaatacctttgtctccta 48898680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 48898701 - 48898755
Alignment:
Q  112 tatggttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcct 166  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||| | ||||||    
T  48898701 tatggttttgggtatgatcagttaacagatgattacttagtggttttattgtcct 48898755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 565
Target Start/End: Original strand, 48863625 - 48863697
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgatg 565  Q
    ||||| || ||||||||| ||||||||  ||||||||||||||||| |||| ||||||| ||| |||||||||    
T  48863625 gttgacatatgggtgatggaagaatacggagtgcattcatcttggattaaaactcttgtgctttctattgatg 48863697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 48870450 - 48870502
Alignment:
Q  11 tctacctatggaatccatccacccgagttcataaacaaatacctttgtctcct 63  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||| ||||    
T  48870450 tctacctatggaatccatccaccggatttcacaaacaaatacctttgtgtcct 48870502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 48875754 - 48875806
Alignment:
Q  11 tctacctatggaatccatccacccgagttcataaacaaatacctttgtctcct 63  Q
    ||||||||||||||||||||||| || |||| |||||||||||| ||||||||    
T  48875754 tctacctatggaatccatccaccggatttcacaaacaaatacctatgtctcct 48875806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 48886136 - 48886188
Alignment:
Q  11 tctacctatggaatccatccacccgagttcataaacaaatacctttgtctcct 63  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||| ||||    
T  48886136 tctacctatggaatccatccaccggatttcacaaacaaatacctttgtgtcct 48886188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 356 - 576
Target Start/End: Original strand, 48898963 - 48899183
Alignment:
Q  356 ttgcatttgatttaacggaaaggaaacttttagagatgccttttctagatgattctggccatgaaattgaatattgtgagttgtgggtatttggagaatt 455  Q
    |||| ||||||||||||||||||||||| ||||||||| ||  || ||||||||  |  |||     | |  ||||||  |||||||| |||||||| ||    
T  48898963 ttgcctttgatttaacggaaaggaaactgttagagatgtctcctccagatgatttggaacatattcctcaggattgtggtttgtgggtctttggagattt 48899062  T
Q  456 tcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttctt 555  Q
    | | ||| ||||||||    |||||| ||||  ||  |||||||| ||||||||||||||||| |||||  | || ||||||||     |||||||||||    
T  48899063 tttcagtatatgggctgcaaattatgctaatgatacagttgaaatatgggtgatgaaagaatataaagtaaaatcctcttggacagtgactcttgttctt 48899162  T
Q  556 cctattgatggcactcccact 576  Q
    ||||||||||||| |||||||    
T  48899163 cctattgatggcattcccact 48899183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 48891326 - 48891377
Alignment:
Q  17 tatggaatccatccacccgagttcataaacaaatacctttgtctcctattga 68  Q
    ||||||||||||||||  || |||| ||||||||||||||||||||||||||    
T  48891326 tatggaatccatccactggacttcacaaacaaatacctttgtctcctattga 48891377  T

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Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 198 - 389
Target Start/End: Complemental strand, 49044185 - 49043994
Alignment:
Q  198 tttggaatttttctcattaagagataatacctggaaagtactagggggtactcgcttcccttatatgaatgactatgatgatcccagagtagggtcactt 297  Q
    |||||| ||||||||||| ||||||||||  ||||| | | | | || ||||  |||||||||||| ||   || |||| || |||  |||||||| ||     
T  49044185 tttggagtttttctcattgagagataatagatggaatgaaattgaggttactaacttcccttatataaacttctctgattattccatggtagggtcgctc 49044086  T
Q  298 tttaacggggttattcattggttagcctatcatcatgatttagtgaagaatgctattcttgcatttgatttaacggaaaggaaacttttaga 389  Q
    ||||| |||| |||||| ||||| || | ||||| |||||||   | ||||| |||| |||| ||||||||||  |||||||||||||||||    
T  49044085 tttaatggggctattcactggttggcttttcatcttgatttatcaatgaatgttattgttgcctttgatttaattgaaaggaaacttttaga 49043994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 49044358 - 49044311
Alignment:
Q  16 ctatggaatccatccacccgagttcataaacaaatacctttgtctcct 63  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||    
T  49044358 ctatggaatccatccactagagttcacaaacaaatacctttgtctcct 49044311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 7877727 - 7877848
Alignment:
Q  113 atggttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcctgtgatccaaccttagtttattgttattcgcgtttggaatttttctc 212  Q
    |||||||||| ||||| || | ||||||||||||||  ||||||||| |||||| | |||||||| ||||| ||| ||   | | |||| | ||||||||    
T  7877727 atggttttggttatgaccaatcaagagatgattacttggtggtttcattgtcctataatccaaccatagttaatt-ttcaacacatttgaagtttttctc 7877825  T
Q  213 attaagagataatacctggaaag 235  Q
    ||| ||||||||||| |||||||    
T  7877826 atttagagataatacatggaaag 7877848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 436 - 474
Target Start/End: Original strand, 7878049 - 7878087
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatg 474  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  7878049 ttgtgggtatttggagaatttctcagtctatgggctatg 7878087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 107 - 177
Target Start/End: Original strand, 50669047 - 50669117
Alignment:
Q  107 atctatatggttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcctgtgatccaacc 177  Q
    |||||||||||||||| ||||| | || ||||||||||||||  || |||||| |||||| ||||||||||    
T  50669047 atctatatggttttggttatgaccggtcaagagatgattacttggttgtttcattgtcctatgatccaacc 50669117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 429 - 574
Target Start/End: Complemental strand, 48735176 - 48735031
Alignment:
Q  429 ttgtgagttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcat 528  Q
    |||||| ||||||||||||||||||||||| ||| | | | ||||| ||| | |||||  ||  |||   || |||  ||||||||||||||||||| ||    
T  48735176 ttgtgaattgtgggtatttggagaatttctcagtttttcgactatgaattttagtaataatacagttatgatatggacgatgaaagaatacaaagtgaat 48735077  T
Q  529 tcatcttggactaaagctcttgttcttcctattgatggcactccca 574  Q
    || |||||||||||| ||| || | |  || |||||||||||||||    
T  48735076 tcgtcttggactaaaactcatgctgtgtctgttgatggcactccca 48735031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 48863137 - 48863190
Alignment:
Q  11 tctacctatggaatccatccacccgagttcataaacaaatacctttgtctccta 64  Q
    ||||||||||||||||||||||| ||| ||| ||||||||||||| | ||||||    
T  48863137 tctacctatggaatccatccaccggagctcagaaacaaataccttcgcctccta 48863190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 48870722 - 48870827
Alignment:
Q  304 ggggttattcattggttagcctatcatcatgatttagtgaagaatgctattcttgcatttgatttaacggaaaggaaacttttagagatgccttttctag 403  Q
    |||| |||||||||||| || |||| |  || |||||  ||||||| ||| ||||| |||||||||||||||||| ||||||| || |||| ||| | ||    
T  48870722 ggggctattcattggttggcttatcgtgctggtttaggaaagaatgttatccttgcctttgatttaacggaaaggcaactttttgatatgcttttaccag 48870821  T
Q  404 atgatt 409  Q
    ||||||    
T  48870822 atgatt 48870827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 304 - 409
Target Start/End: Original strand, 48886408 - 48886513
Alignment:
Q  304 ggggttattcattggttagcctatcatcatgatttagtgaagaatgctattcttgcatttgatttaacggaaaggaaacttttagagatgccttttctag 403  Q
    |||| |||||||||||| || |||| |  || |||||  ||||||| ||| ||||| |||||||||||||||||| ||||||| || |||| ||| | ||    
T  48886408 ggggctattcattggttggcttatcgtgctggtttaggaaagaatgttatccttgcctttgatttaacggaaaggcaactttttgatatgcttttaccag 48886507  T
Q  404 atgatt 409  Q
    ||||||    
T  48886508 atgatt 48886513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 148
Target Start/End: Complemental strand, 48156509 - 48156469
Alignment:
Q  108 tctatatggttttgggtatgatcagttaagagatgattact 148  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  48156509 tctatatggatttgggtatgatcaattaagagatgattact 48156469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 493 - 565
Target Start/End: Complemental strand, 49040853 - 49040781
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgatg 565  Q
    ||||| || ||||||||| |||||||   ||||||||||||||||| ||||  |||||| |||||||||||||    
T  49040853 gttgatatatgggtgatggaagaatatggagtgcattcatcttggattaaaattcttgtgcttcctattgatg 49040781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 48147801 - 48147754
Alignment:
Q  112 tatggttttgggtatgatcagttaagagatgattactcagtggtttca 159  Q
    ||||||||||||||||| ||||||| |||||||||||  |||||||||    
T  48147801 tatggttttgggtatgaccagttaacagatgattacttggtggtttca 48147754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 304 - 407
Target Start/End: Complemental strand, 48705272 - 48705169
Alignment:
Q  304 ggggttattcattggttagcctatcatcatgatttagtgaagaatgctattcttgcatttgatttaacggaaaggaaacttttagagatgccttttctag 403  Q
    |||| |||||||||||| || |||| ||||||||||   ||| ||| |||| |||| |||||||||| ||||||| ||||||| || |||| ||| | ||    
T  48705272 ggggctattcattggttggcttatcgtcatgatttacgaaaggatgttattgttgcctttgatttaatggaaagggaactttttgatatgcttttgccag 48705173  T
Q  404 atga 407  Q
    ||||    
T  48705172 atga 48705169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 302 - 409
Target Start/End: Original strand, 48876024 - 48876131
Alignment:
Q  302 acggggttattcattggttagcctatcatcatgatttagtgaagaatgctattcttgcatttgatttaacggaaaggaaacttttagagatgccttttct 401  Q
    |||||| |||||||||||| || |||| | ||||||||   ||||||| ||| ||||| |||||||| || |||||| ||||||| || |||| ||| |     
T  48876024 acggggctattcattggttggcttatcgtgatgatttacaaaagaatgttatccttgcctttgatttcactgaaaggcaactttttgatatgcatttgcc 48876123  T
Q  402 agatgatt 409  Q
    ||||||||    
T  48876124 agatgatt 48876131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 68
Target Start/End: Original strand, 50668966 - 50669017
Alignment:
Q  17 tatggaatccatccacccgagttcataaacaaatacctttgtctcctattga 68  Q
    ||||||||||||||||| || |||||||||| ||||| ||||||||| ||||    
T  50668966 tatggaatccatccaccagatttcataaacagataccattgtctccttttga 50669017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 10 - 64
Target Start/End: Complemental strand, 45372237 - 45372183
Alignment:
Q  10 ttctacctatggaatccatccacccgagttcataaacaaatacctttgtctccta 64  Q
    ||||| |||||||||||||||||  | ||||| |||||||||||||| |||||||    
T  45372237 ttctatctatggaatccatccactggtgttcagaaacaaatacctttttctccta 45372183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 351 - 409
Target Start/End: Original strand, 47208126 - 47208184
Alignment:
Q  351 tattcttgcatttgatttaacggaaaggaaacttttagagatgccttttctagatgatt 409  Q
    ||||||||||||||||||||  ||||| |||||||||  ||||||||||| | ||||||    
T  47208126 tattcttgcatttgatttaattgaaagaaaacttttaatgatgccttttccaaatgatt 47208184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 493 - 575
Target Start/End: Complemental strand, 49048256 - 49048174
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgatggcactcccac 575  Q
    |||||||| |||||||||||||| || ||||||||||| || ||||||||  || ||||| || ||| ||||| || ||||||    
T  49048256 gttgaaatatgggtgatgaaagagtataaagtgcattcgtcatggactaagacttttgttttttctactgatgtcattcccac 49048174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 49048749 - 49048699
Alignment:
Q  13 tacctatggaatccatccacccgagttcataaacaaatacctttgtctcct 63  Q
    ||||| ||||||||||||||  ||||||| | |||||||||||||||||||    
T  49048749 tacctttggaatccatccactagagttcacagacaaatacctttgtctcct 49048699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 50250957 - 50250907
Alignment:
Q  11 tctacctatggaatccatccacccgagttcataaacaaatacctttgtctc 61  Q
    ||||||||||||||||||||||| |  |||| | |||||||||||||||||    
T  50250957 tctacctatggaatccatccaccgggcttcacatacaaatacctttgtctc 50250907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 146
Target Start/End: Complemental strand, 43596526 - 43596485
Alignment:
Q  105 ttatctatatggttttgggtatgatcagttaagagatgatta 146  Q
    |||||||||||||||| ||||| |||| ||||||||||||||    
T  43596526 ttatctatatggtttttggtatcatcaattaagagatgatta 43596485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 157
Target Start/End: Original strand, 48875843 - 48875888
Alignment:
Q  112 tatggttttgggtatgatcagttaagagatgattactcagtggttt 157  Q
    ||||||||||||||||||||||||  |||||||||||  |||||||    
T  48875843 tatggttttgggtatgatcagttagcagatgattacttggtggttt 48875888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 7813469 - 7813509
Alignment:
Q  107 atctatatggttttgggtatgatcagttaagagatgattac 147  Q
    |||||||||||||||| ||||| |||| |||||||||||||    
T  7813469 atctatatggttttggttatgaccagtcaagagatgattac 7813509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 147
Target Start/End: Original strand, 7822958 - 7822998
Alignment:
Q  107 atctatatggttttgggtatgatcagttaagagatgattac 147  Q
    |||||||||||||||| ||||| |||| |||||||||||||    
T  7822958 atctatatggttttggttatgaccagtcaagagatgattac 7822998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 496 - 564
Target Start/End: Original strand, 7823332 - 7823400
Alignment:
Q  496 gaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctattgat 564  Q
    ||||| |||||| | ||||| |||||||||||||  ||||||| |||| ||||||||||| || |||||    
T  7823332 gaaatatgggtgtttaaagattacaaagtgcatttgtcttggaataaaactcttgttctttctgttgat 7823400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 37827161 - 37827109
Alignment:
Q  11 tctacctatggaatccatccacccgagttcataaacaaatacctttgtctcct 63  Q
    ||||| ||||||||||||||||  || |||| ||||||||||| |||||||||    
T  37827161 tctacatatggaatccatccactggatttcacaaacaaatacccttgtctcct 37827109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 345 - 446
Target Start/End: Original strand, 48861475 - 48861580
Alignment:
Q  345 gaatgctattcttgcatttgatttaac----ggaaaggaaacttttagagatgccttttctagatgattctggccatgaaattgaatattgtgagttgtg 440  Q
    ||||| |||| |||||||||||||||     ||||| |||||||||||||||| |||||||  || ||| || |||||||  |  ||||||||| |||||    
T  48861475 gaatgttattgttgcatttgatttaatatatggaaaagaaacttttagagatgtcttttctccataattttgaccatgaacctacatattgtgatttgtg 48861574  T
Q  441 ggtatt 446  Q
    ||||||    
T  48861575 ggtatt 48861580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 494 - 542
Target Start/End: Original strand, 48861649 - 48861697
Alignment:
Q  494 ttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaa 542  Q
    ||||||| ||||| || |||||||||||||||||||  |||||||||||    
T  48861649 ttgaaatatgggtaataaaagaatacaaagtgcatttgtcttggactaa 48861697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 244 - 573
Target Start/End: Complemental strand, 47451850 - 47451521
Alignment:
Q  244 ggtactcgcttcccttatatgaatgactatgatgatcccagagtagggtcactttttaacggggttattcattggttagcctatcatcatgatttagtga 343  Q
    ||||||| ||||||||||||||||   | ||||||||| ||||||||||  || || || |||| |||| ||||||| || | || ||||||| ||   |    
T  47451850 ggtactcacttcccttatatgaattcatgtgatgatcctagagtagggtggctcttcaatggggctatttattggttggcttttcgtcatgatatatcca 47451751  T
Q  344 agaatgctattcttgcatttgatttaacggaaaggaaacttttagagatgccttttctagatgattctggccatgaaattgaatattgtgagttgtgggt 443  Q
     ||||| ||||  |||||||||||||| |||||| ||| |||||||  ||  ||| | |||||||| || |||||||  |    ||||||  ||||||||    
T  47451750 tgaatgttattgctgcatttgatttaatggaaagaaaatttttagatgtgaatttgccagatgattttgaccatgaacctaccaattgtggtttgtgggt 47451651  T
Q  444 atttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaa 543  Q
    |||||||||||||||||||||| ||| | |||||| |  ||||  ||  |||||||| |||||||||||||||||||||||  |||| ||||||   ||     
T  47451650 atttggagaatttcttagtctaagggttctggattgtcataatgatatagttgaaatatgggtgatgaaagaatacaaagttaattcgtcttgggaaaag 47451551  T
Q  544 gctcttgttcttcctattgatggcactccc 573  Q
     |||||||||||||||||||||||| ||||    
T  47451550 actcttgttcttcctattgatggcattccc 47451521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 361 - 568
Target Start/End: Complemental strand, 11005755 - 11005554
Alignment:
Q  361 tttgatttaacggaaaggaaacttttagagatgccttttctagatgattctggccatgaaattgaatattgtgagttgtgggtatttggagaatttctta 460  Q
    |||||||||  ||||||||||||||||||||||||||||| | ||| || ||  ||||||  |  | ||||||| |||||| ||||||||||||||||||    
T  11005755 tttgatttagtggaaaggaaacttttagagatgccttttccatatggttttgatcatgaacctatagattgtgatttgtggatatttggagaatttctta 11005656  T
Q  461 gtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctat 560  Q
    |||||||||||||||   |||  || |      ||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||  |  ||||    
T  11005655 gtctatgggctatgggggatg--aaacaa----ttgaaatatgggttatgaaagaatacaaagtgcattcgtcttggactaaggctcttgtcttatctat 11005562  T
Q  561 tgatggca 568  Q
    ||||||||    
T  11005561 tgatggca 11005554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 361 - 565
Target Start/End: Complemental strand, 11015318 - 11015120
Alignment:
Q  361 tttgatttaacggaaaggaaacttttagagatgccttttctagatgattctggccatgaaattgaatattgtgagttgtgggtatttggagaatttctta 460  Q
    |||||||||  ||||||||||||||| ||||||| ||||| ||||| || || | |||||  |  | ||||||| |||||| |||||||||||||||| |    
T  11015318 tttgatttagtggaaaggaaacttttggagatgcattttccagatggttttgactatgaacctatagattgtgatttgtggatatttggagaatttctaa 11015219  T
Q  461 gtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctat 560  Q
    ||||||||||||||||  |||      | |  |||||||| ||||| ||||||||||||||||||||||| ||||||  |||| ||||||| ||  ||||    
T  11015218 gtctatgggctatggaggatg------gaacagttgaaatatgggttatgaaagaatacaaagtgcattcgtcttgggttaaaactcttgtcctatctat 11015125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 258 - 564
Target Start/End: Complemental strand, 11024433 - 11024133
Alignment:
Q  258 ttatatgaatgactatgatgatcccagagtagggtcactttttaacggggttattcattggttagcctatcatcatgatttagtgaagaatgctattctt 357  Q
    |||||||||||   |||||||||||| ||||||| |||| ||||| |||  ||||||||||||  | | ||   ||||||||   | | ||| |||| ||    
T  11024433 ttatatgaatgtaaatgatgatcccacagtagggacactctttaatgggaatattcattggttctcttttcgcaatgatttatcaatggatgttattatt 11024334  T
Q  358 gcatttgatttaacggaaaggaaacttttagagatgccttttctagatgattctggccatgaaattgaatattgtgagttgtgggtatttggagaatttc 457  Q
    || |||||||||  ||||||| ||||||| ||||||||||||| ||||| || ||  ||||||  |    ||||||| |||||| |||||||||||||||    
T  11024333 gcctttgatttagtggaaagggaacttttggagatgccttttccagatggttttgatcatgaacctatggattgtgatttgtggatatttggagaatttc 11024234  T
Q  458 ttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcc 557  Q
    | ||||||||||||||||    || |||   |     |||||| ||||| ||||||||||||||||||||||| |||||||||||  ||||||| ||  |    
T  11024233 tcagtctatgggctatggggggtg-taacaat-----tgaaatatgggttatgaaagaatacaaagtgcattcgtcttggactaagactcttgtcctatc 11024140  T
Q  558 tattgat 564  Q
    |||||||    
T  11024139 tattgat 11024133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 11006041 - 11005978
Alignment:
Q  108 tctatatggttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcctgtgat 171  Q
    ||||||||||||||||||||| || | ||||||||||||||  ||||| |||||||||| ||||    
T  11006041 tctatatggttttgggtatgaccattcaagagatgattacttggtggtatcagtgtcctatgat 11005978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 11024616 - 11024553
Alignment:
Q  108 tctatatggttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcctgtgat 171  Q
    ||||||||||||||||||||| || | ||||||||||||||  ||||| |||||||||| ||||    
T  11024616 tctatatggttttgggtatgaccattcaagagatgattacttggtggtatcagtgtcctatgat 11024553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 11015600 - 11015546
Alignment:
Q  112 tatggttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcct 166  Q
    ||||||||||||||||| || ||||||||||||||||  ||||| ||||||||||    
T  11015600 tatggttttgggtatgaccatttaagagatgattacttggtggtatcagtgtcct 11015546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 47452074 - 47452022
Alignment:
Q  11 tctacctatggaatccatccacccgagttcataaacaaatacctttgtctcct 63  Q
    ||||| ||||||||||||||||  ||||||| ||||||||||||||| |||||    
T  47452074 tctacatatggaatccatccactggagttcacaaacaaatacctttgcctcct 47452022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 3e-28; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 428 - 552
Target Start/End: Original strand, 9120058 - 9120182
Alignment:
Q  428 attgtgagttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgca 527  Q
    |||||||  |||||||||||||||||||||| ||| ||||||||||||||| || ||||  ||  |||||||| ||||||||||||||||||||||||||    
T  9120058 attgtgatgtgtgggtatttggagaatttctcagtatatgggctatggattttgctaatgatacagttgaaatatgggtgatgaaagaatacaaagtgca 9120157  T
Q  528 ttcatcttggactaaagctcttgtt 552  Q
    ||| |||||||  ||| ||||||||    
T  9120158 ttcctcttggaagaaaactcttgtt 9120182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 439 - 537
Target Start/End: Original strand, 179364 - 179462
Alignment:
Q  439 tgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttgg 537  Q
    |||||||||||| ||||||| ||| |||||||||||||||||| ||||  ||  |||||||| ||||||||||||||||||||||||||||||||||||    
T  179364 tgggtatttggacaatttctcagtatatgggctatggattatgataatgatacagttgaaatatgggtgatgaaagaatacaaagtgcattcatcttgg 179462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 492 - 561
Target Start/End: Complemental strand, 42562035 - 42561966
Alignment:
Q  492 tgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttcctatt 561  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  42562035 tgttgatatatgggtgatgaaagaatacaaagtgcattcatcttggactaagattcttgttcttcctatt 42561966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 42562499 - 42562441
Alignment:
Q  10 ttctacctatggaatccatccacccgagttcataaacaaatacctttgtctcctattga 68  Q
    |||||||||||||||||||||| | ||  ||| ||||||||||||||||||||||||||    
T  42562499 ttctacctatggaatccatccatcggacatcacaaacaaatacctttgtctcctattga 42562441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 398
Target Start/End: Original strand, 29688341 - 29688394
Alignment:
Q  345 gaatgctattcttgcatttgatttaacggaaaggaaacttttagagatgccttt 398  Q
    ||||| |||| ||| |||| |||||||||||||||||||| ||||| |||||||    
T  29688341 gaatgttattgttggatttcatttaacggaaaggaaacttatagagttgccttt 29688394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 436 - 530
Target Start/End: Complemental strand, 4962277 - 4962183
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattc 530  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||| | ||| |||| |||||||| ||||||||||||||||||||| |||||||    
T  4962277 ttgtgggtatttggagaatttctcagtctatggggcatggattatcgcaattgtagagttgaaatatgggtgatgaaagaatacaaactgcattc 4962183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 351 - 565
Target Start/End: Original strand, 15349101 - 15349315
Alignment:
Q  351 tattcttgcatttgatttaacggaaaggaaacttttagagatgccttttctagatgattctggccatgaaattgaatattgtgagttgtgggtatttgga 450  Q
    |||| |||||||||||||||  ||||||||||| || |||||||||  || |||||||| ||  |||||   ||   ||||||  |||||||| |||||     
T  15349101 tattgttgcatttgatttaaacgaaaggaaactgtttgagatgcctcctccagatgattttgaacatgatgctggtgattgtggtttgtgggtctttggc 15349200  T
Q  451 gaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttg 550  Q
    |||||| ||||||| ||| ||| |||||||  ||||  |||  ||||||| |||||||||||||||||||||||| | || |||||||| ||   |||||    
T  15349201 gaattttttagtctttggtctacggattatcctaatgatagctttgaaatatgggtgatgaaagaatacaaagtgaactcttcttggacaaagattcttg 15349300  T
Q  551 ttcttcctattgatg 565  Q
    |||||  ||||||||    
T  15349301 ttcttaatattgatg 15349315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 563
Target Start/End: Original strand, 12195627 - 12195754
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    ||||||||||||||| ||||||| |||||||||  |||| ||| || |||||| |  |||||||| |||| ||||||||||||||||   || |||||||    
T  12195627 ttgtgggtatttggaaaatttctcagtctatggaatatgaattttgataatcggacagttgaaatatgggagatgaaagaatacaaacaacaatcatctt 12195726  T
Q  536 ggactaaagctcttgttcttcctattga 563  Q
    |||||||  |||||||  ||||||||||    
T  12195727 ggactaagactcttgtaattcctattga 12195754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 436 - 563
Target Start/End: Original strand, 12440055 - 12440182
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    ||||||||||||||| ||||||| |||||||||  |||| ||| || |||||| |  |||||||| |||| ||||||||||||||||   || |||||||    
T  12440055 ttgtgggtatttggaaaatttctcagtctatggaatatgaattttgataatcggacagttgaaatatgggagatgaaagaatacaaacaacaatcatctt 12440154  T
Q  536 ggactaaagctcttgttcttcctattga 563  Q
    |||||||  |||||||  ||||||||||    
T  12440155 ggactaagactcttgtaattcctattga 12440182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 253 - 387
Target Start/End: Complemental strand, 4031844 - 4031710
Alignment:
Q  253 ttcccttatatgaatgactatgatgatcccagagtagggtcactttttaacggggttattcattggttagcctatcatcatgatttagtgaagaatgcta 352  Q
    ||||||||||| |||| || | ||||||||||||||||||| |||||||  ||   |||||||||||| || | || ||||||||||  ||  |||| ||    
T  4031844 ttcccttatataaatgcctctcatgatcccagagtagggtcgctttttagtggatctattcattggttggcttttcgtcatgatttatcgataaatgtta 4031745  T
Q  353 ttcttgcatttgatttaacggaaaggaaactttta 387  Q
    |  |||| ||||||||||||||||| |||||||||    
T  4031744 tcgttgcctttgatttaacggaaagaaaactttta 4031710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 436 - 562
Target Start/End: Original strand, 12200645 - 12200771
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    |||||||||||||||||||||||||||||||||  |||| ||| || |||||  |   ||||||| |||| |||||||  ||||||| ||| ||| ||||    
T  12200645 ttgtgggtatttggagaatttcttagtctatggaatatgaattttgataatcagacgcttgaaatatgggcgatgaaaatatacaaactgcgttcgtctt 12200744  T
Q  536 ggactaaagctcttgttcttcctattg 562  Q
    |||| ||  |||||||  |||||||||    
T  12200745 ggaccaagactcttgtaattcctattg 12200771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 436 - 562
Target Start/End: Original strand, 12445073 - 12445199
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    |||||||||||||||||||||||||||||||||  |||| ||| || |||||  |   ||||||| |||| |||||||  ||||||| ||| ||| ||||    
T  12445073 ttgtgggtatttggagaatttcttagtctatggaatatgaattttgataatcagacgcttgaaatatgggcgatgaaaatatacaaactgcgttcgtctt 12445172  T
Q  536 ggactaaagctcttgttcttcctattg 562  Q
    |||| ||  |||||||  |||||||||    
T  12445173 ggaccaagactcttgtaattcctattg 12445199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 542
Target Start/End: Complemental strand, 4031627 - 4031578
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaa 542  Q
    |||||||| ||||| ||||||||||||||| ||||||| |||||||||||    
T  4031627 gttgaaatatgggttatgaaagaatacaaaatgcattcgtcttggactaa 4031578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 15348857 - 15348966
Alignment:
Q  116 gttttgggtatgatcagttaagagatgattactcagtggtttcagtgtcctgtgatccaaccttagtttattgttattcgcgtttggaatttttctcatt 215  Q
    |||| |||||||| || |||| |||||||||||  ||||||| | |||||| ||||||  |||||| | ||  ||||||| ||||||| |||||||| ||    
T  15348857 gtttcgggtatgaccaattaaaagatgattacttggtggttttaatgtcctatgatcccgccttagataatatttattcgtgtttggagtttttctcgtt 15348956  T
Q  216 aagagataat 225  Q
     |||||||||    
T  15348957 gagagataat 15348966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 585 - 624
Target Start/End: Complemental strand, 4030403 - 4030364
Alignment:
Q  585 gtacttttccccaatatgctctacaaaaagtggtgatatt 624  Q
    ||||||||||||||| |||||||||| |||||||||||||    
T  4030403 gtacttttccccaatgtgctctacaataagtggtgatatt 4030364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 588 - 624
Target Start/End: Complemental strand, 4962131 - 4962095
Alignment:
Q  588 cttttccccaatatgctctacaaaaagtggtgatatt 624  Q
    ||||||||||||||  |||||||||||||||||||||    
T  4962131 cttttccccaatatattctacaaaaagtggtgatatt 4962095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 588 - 624
Target Start/End: Original strand, 12200788 - 12200824
Alignment:
Q  588 cttttccccaatatgctctacaaaaagtggtgatatt 624  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  12200788 cttttcccctatatactctacaaaaagtggtgatatt 12200824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 588 - 624
Target Start/End: Original strand, 12445216 - 12445252
Alignment:
Q  588 cttttccccaatatgctctacaaaaagtggtgatatt 624  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  12445216 cttttcccctatatactctacaaaaagtggtgatatt 12445252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 21015714 - 21015767
Alignment:
Q  11 tctacctatggaatccatccacccgagttcataaacaaatacctttgtctccta 64  Q
    ||||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  21015714 tctacctatggaatccatccactagagttcacaaacaaatacctttgtctccta 21015767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 205 - 542
Target Start/End: Original strand, 21015899 - 21016230
Alignment:
Q  205 tttttctcattaagagataatacctggaaagtactagggggtactcgcttcccttatatgaatgactatgatgatcccagagtagggtcactttttaacg 304  Q
    |||||||| || ||||||||||  ||||||| | | | |||||||| ||||||||| ||||||  || |||| || |||  ||||||||  ||||||| |    
T  21015899 tttttctcgttgagagataataggtggaaagaaattgagggtactcccttcccttacatgaatacctctgattattccatggtagggtcggtttttaatg 21015998  T
Q  305 gggttattcattggttagcctatcatcatgatttagtgaagaatgctattcttgcatttgatttaacggaaaggaaacttttagagatgccttttctaga 404  Q
    ||| |||||||||||| || | || ||||||||||   | ||| | |||  |||| |||||||| |  ||||| |||||||| || ||| |||| |  ||    
T  21015999 gggctattcattggttggcttttcgtcatgatttatcaatgaaagttatcattgcctttgatttgatagaaagaaaacttttcgacatgtctttgccgga 21016098  T
Q  405 tgattctggccatgaaattgaatattgtgagttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgg 504  Q
    ||||   |  ||||||  |  ||||||||| ||||||||||| || |||||| | ||| ||||| ||||||||  || ||    ||  |||||||| |||    
T  21016099 tgatatggaacatgaacctatatattgtgatttgtgggtattcggtgaatttttgagtgtatggactatggatagtgata----ta--gttgaaatatgg 21016192  T
Q  505 gtgatgaaagaatacaaagtgcattcatcttggactaa 542  Q
    || ||||||||||||||||| ||||| |||||||||||    
T  21016193 gttatgaaagaatacaaagtacattcgtcttggactaa 21016230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 436 - 538
Target Start/End: Complemental strand, 21979386 - 21979284
Alignment:
Q  436 ttgtgggtatttggagaatttcttagtctatgggctatggattatggtaatcgtagtgttgaaatttgggtgatgaaagaatacaaagtgcattcatctt 535  Q
    ||||||||||||||||| ||||||||||||| || | | |||||||| |||| ||      |||| ||||||||||||||||||||||||| ||| ||||    
T  21979386 ttgtgggtatttggagattttcttagtctattggatgtcgattatggaaatcatacatcaaaaatatgggtgatgaaagaatacaaagtgcgttcctctt 21979287  T
Q  536 gga 538  Q
    |||    
T  21979286 gga 21979284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 14197375 - 14197337
Alignment:
Q  502 tgggtgatgaaagaatacaaagtgcattcatcttggact 540  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  14197375 tgggtgatgaaagaatacaaaatgcattcatcttggact 14197337  T

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Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 555
Target Start/End: Original strand, 24323139 - 24323192
Alignment:
Q  502 tgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttctt 555  Q
    |||||||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  24323139 tgggtgatgaaagaatacaaagtgcagtcatcttcgactaaaactcttgttctt 24323192  T

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Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 493 - 554
Target Start/End: Original strand, 24416138 - 24416199
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttct 554  Q
    ||||| || |||||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  24416138 gttgatatatgggtgatgaaagaatacaaagggcagtcatcttggactaaaactcttgttct 24416199  T

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Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 493 - 555
Target Start/End: Original strand, 24340771 - 24340833
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttctt 555  Q
    ||||| || ||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  24340771 gttgatatctgggtaatgaaagaatataaagtgcagtcatcttggactaaaactcttgttctt 24340833  T

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Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 493 - 555
Target Start/End: Original strand, 24353136 - 24353198
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttctt 555  Q
    ||||| || ||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||    
T  24353136 gttgatatctgggtaatgaaagaatataaagtgcagtcatcttggactaaaactcttgttctt 24353198  T

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Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 24367534 - 24367586
Alignment:
Q  502 tgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttct 554  Q
    ||||| ||| ||||||||||||||||||| |||||||||||| ||||||||||    
T  24367534 tgggtaatggaagaatacaaagtgcattcgtcttggactaaaactcttgttct 24367586  T

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Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 493 - 552
Target Start/End: Original strand, 24310576 - 24310635
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgtt 552  Q
    ||||| || |||||||||||||||||||||||||| || ||||||| |||| ||||||||    
T  24310576 gttgatatatgggtgatgaaagaatacaaagtgcagtcttcttggagtaaaactcttgtt 24310635  T

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Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 55
Target Start/End: Original strand, 24310097 - 24310135
Alignment:
Q  17 tatggaatccatccacccgagttcataaacaaatacctt 55  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  24310097 tatggaatccatccaccggagttcatagacaaatacctt 24310135  T

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Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 522 - 564
Target Start/End: Original strand, 24369830 - 24369872
Alignment:
Q  522 agtgcattcatcttggactaaagctcttgttcttcctattgat 564  Q
    |||||||||||||||||||||| |||||||||||  |||||||    
T  24369830 agtgcattcatcttggactaaaactcttgttcttagtattgat 24369872  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 24322389 - 24322426
Alignment:
Q  18 atggaatccatccacccgagttcataaacaaatacctt 55  Q
    ||||||||||||| |||||||||||| |||||||||||    
T  24322389 atggaatccatccccccgagttcatagacaaatacctt 24322426  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000006; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 493 - 556
Target Start/End: Original strand, 48884184 - 48884247
Alignment:
Q  493 gttgaaatttgggtgatgaaagaatacaaagtgcattcatcttggactaaagctcttgttcttc 556  Q
    |||||||| | |||||||||||||||||||||||||   |||||||||||  ||||||||||||    
T  48884184 gttgaaatataggtgatgaaagaatacaaagtgcatatgtcttggactaagactcttgttcttc 48884247  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 502 - 540
Target Start/End: Complemental strand, 30130954 - 30130916
Alignment:
Q  502 tgggtgatgaaagaatacaaagtgcattcatcttggact 540  Q
    ||||||||| ||||||||| |||||||||||||||||||    
T  30130954 tgggtgatgcaagaatacacagtgcattcatcttggact 30130916  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 30120479 - 30120435
Alignment:
Q  10 ttctacctatggaatccatccacccgagttcataaacaaatacct 54  Q
    ||||| |||||||||||||||||| |||| || ||||||||||||    
T  30120479 ttctatctatggaatccatccaccggagtccacaaacaaatacct 30120435  T

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