View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4454-Insertion-5 (Length: 502)
Name: NF4454-Insertion-5
Description: NF4454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4454-Insertion-5 |
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Alignment Details
Target: chr8 (Bit Score: 396; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 8 - 472
Target Start/End: Complemental strand, 41027590 - 41027126
Alignment:
| Q |
8 |
ttgagatacatcaacatgatgattaattttagttgtgaacaacggatcacatttcttcggtgtggatttctcatgtcaaacaacatgttccactttcgta |
107 |
Q |
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| T |
41027590 |
ttgagatacatcaacatgatgattatttttaggtgtgaacaacggatcacattttttcggtgtggatttctcatgtcaaacaacatgttccacttttgta |
41027491 |
T |
|
| Q |
108 |
attcaaatatgacattctcacccatgtgacacaatctattatgtcataactttattttttcagtagattcaattacatgaacatatttaattannnnnnn |
207 |
Q |
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| T |
41027490 |
attcaaatatgacattctcactcatgtgacacaatctattatgtcataactttattttttcagttaattcaattacatgaacatatttaattattttttt |
41027391 |
T |
|
| Q |
208 |
actctgccacataaaaggttgaacactttgtacttctagcaacaattatacaatccttggtatgtttgcaggtattctgcgagaataaactatcataccc |
307 |
Q |
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| T |
41027390 |
actctgccacataaaaggttgaacactttgtacttctagcaacaattatacaatccttggtatgtttgcaggtattctgcgagaataaactgtcataccc |
41027291 |
T |
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| Q |
308 |
ttcaccacataactcagccattaaaattaaattcaattgaatgtctcaaacatgctcacatatttgagagttaactttgtgtcattggacatctccaaat |
407 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41027290 |
ttcaccacataacttagccattaaaattaaattcaattgaatgtctcaaacatgctcacatatttgagagttaactttgtgtcattggacatctccaaat |
41027191 |
T |
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| Q |
408 |
tatcttatcgaaggccaccgcattttatcacattatcaacaactttgtacctgatttgaaattga |
472 |
Q |
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|||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
41027190 |
tatcttatggaaggccaccacattttatcacactatcaacaactttgtacctgatttgaaattga |
41027126 |
T |
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