View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4454_low_8 (Length: 240)
Name: NF4454_low_8
Description: NF4454
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4454_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 4069404 - 4069183
Alignment:
| Q |
1 |
atccccattagggtatacaagaacaatagcaacattggagtgggatacccatcaaaggcaatgcaagtacaagcaagtttatggaatggtgaaaattggg |
100 |
Q |
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| T |
4069404 |
atccccattagggtatacaaggacaatagcaacattggagtgggatacccatcaaaggcaatgcaagtacaagcaagtttgtggaatggtgaaaattggg |
4069305 |
T |
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| Q |
101 |
caacagatggagggaaagccaaaataaattggacaaatgcacctttcaaagcaaacttccaaggatttgatgtcagtggatgtcaaagtcaaaccttaat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4069304 |
caacagatggagggaaagccaaaataaattggacaaatgcacctttcaaagcaaacttccaaggatttgatgtcagtggatgtcaaagtcaaaccttaat |
4069205 |
T |
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| Q |
201 |
tcatccaaattgtgcttctaat |
222 |
Q |
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| |||||||||||||||||||| |
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| T |
4069204 |
tgatccaaattgtgcttctaat |
4069183 |
T |
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