View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4456_low_2 (Length: 480)

Name: NF4456_low_2
Description: NF4456
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4456_low_2
NF4456_low_2
[»] chr8 (31 HSPs)
chr8 (24-461)||(22904256-22904693)
chr8 (25-247)||(24221545-24221770)
chr8 (44-221)||(14162161-14162340)
chr8 (43-108)||(26012992-26013057)
chr8 (40-110)||(19792239-19792309)
chr8 (53-215)||(23221529-23221693)
chr8 (53-108)||(25396947-25397002)
chr8 (43-108)||(18162012-18162077)
chr8 (33-222)||(24341953-24342141)
chr8 (43-222)||(18008037-18008220)
chr8 (53-108)||(23193979-23194034)
chr8 (337-461)||(22369894-22370025)
chr8 (28-92)||(17515806-17515870)
chr8 (310-462)||(18573087-18573244)
chr8 (43-108)||(6279739-6279804)
chr8 (371-461)||(14352340-14352437)
chr8 (337-405)||(11347086-11347154)
chr8 (53-108)||(14351659-14351714)
chr8 (58-108)||(14878317-14878367)
chr8 (332-461)||(22099783-22099921)
chr8 (332-402)||(21831034-21831104)
chr8 (332-402)||(22033683-22033753)
chr8 (33-110)||(26854079-26854157)
chr8 (399-460)||(20375812-20375875)
chr8 (28-71)||(9317880-9317923)
chr8 (164-222)||(21139561-21139620)
chr8 (56-110)||(23503156-23503211)
chr8 (149-215)||(26853972-26854038)
chr8 (54-110)||(15636052-15636108)
chr8 (27-71)||(15759615-15759659)
chr8 (407-460)||(17620695-17620750)
[»] chr2 (50 HSPs)
chr2 (25-234)||(20852006-20852217)
chr2 (32-234)||(19124333-19124536)
chr2 (43-234)||(23257021-23257215)
chr2 (48-234)||(24321680-24321868)
chr2 (40-234)||(19013041-19013231)
chr2 (240-405)||(24321181-24321346)
chr2 (240-401)||(20851605-20851766)
chr2 (28-198)||(24371437-24371609)
chr2 (53-221)||(20281949-20282119)
chr2 (31-108)||(24820599-24820676)
chr2 (28-108)||(24824981-24825061)
chr2 (43-108)||(16134203-16134268)
chr2 (53-110)||(23340591-23340648)
chr2 (310-459)||(25582878-25583032)
chr2 (28-108)||(42767369-42767449)
chr2 (337-461)||(24019195-24019326)
chr2 (53-235)||(15583691-15583876)
chr2 (43-108)||(19929397-19929462)
chr2 (43-110)||(539207-539274)
chr2 (337-461)||(24171296-24171427)
chr2 (43-108)||(5499785-5499850)
chr2 (43-91)||(25481412-25481460)
chr2 (43-91)||(25489018-25489066)
chr2 (32-108)||(24023858-24023930)
chr2 (310-461)||(15532696-15532852)
chr2 (259-384)||(25337707-25337830)
chr2 (54-108)||(22578380-22578434)
chr2 (371-405)||(26191803-26191837)
chr2 (332-402)||(27768944-27769014)
chr2 (364-405)||(23647984-23648025)
chr2 (310-387)||(29955744-29955821)
chr2 (33-111)||(25337156-25337236)
chr2 (407-459)||(25338255-25338307)
chr2 (54-191)||(21436-21574)
chr2 (28-71)||(11391146-11391189)
chr2 (28-71)||(11407807-11407850)
chr2 (28-71)||(24507347-24507390)
chr2 (329-460)||(25144884-25145025)
chr2 (54-108)||(24018636-24018690)
chr2 (413-462)||(19805833-19805882)
chr2 (240-273)||(23257607-23257640)
chr2 (413-446)||(24321135-24321168)
chr2 (28-65)||(32441367-32441404)
chr2 (27-71)||(23139992-23140036)
chr2 (28-64)||(23295743-23295779)
chr2 (27-71)||(23551782-23551826)
chr2 (407-460)||(24502107-24502162)
chr2 (407-460)||(25371099-25371154)
chr2 (28-64)||(25858656-25858692)
chr2 (179-215)||(25858786-25858822)
[»] chr7 (58 HSPs)
chr7 (31-234)||(4983151-4983355)
chr7 (28-229)||(38877290-38877493)
chr7 (43-247)||(17911462-17911668)
chr7 (29-234)||(4541043-4541248)
chr7 (43-233)||(30063962-30064157)
chr7 (40-234)||(17206405-17206600)
chr7 (28-213)||(679497-679685)
chr7 (40-221)||(33609612-33609795)
chr7 (240-460)||(4461280-4461510)
chr7 (33-110)||(4460765-4460842)
chr7 (28-108)||(782773-782853)
chr7 (28-108)||(12561949-12562029)
chr7 (28-108)||(16076825-16076905)
chr7 (28-108)||(5840677-5840757)
chr7 (28-108)||(12567644-12567724)
chr7 (43-110)||(3376509-3376576)
chr7 (240-389)||(6713106-6713256)
chr7 (53-108)||(41722715-41722770)
chr7 (53-107)||(9264406-9264460)
chr7 (43-247)||(35964233-35964438)
chr7 (43-108)||(8787293-8787358)
chr7 (43-108)||(14941741-14941806)
chr7 (43-108)||(15369334-15369399)
chr7 (43-108)||(15707252-15707317)
chr7 (43-108)||(33612281-33612346)
chr7 (43-108)||(48355597-48355662)
chr7 (53-108)||(17946737-17946792)
chr7 (54-116)||(4465812-4465874)
chr7 (43-108)||(648798-648863)
chr7 (43-108)||(9004637-9004702)
chr7 (53-108)||(8780430-8780485)
chr7 (53-108)||(48340615-48340670)
chr7 (43-105)||(16097427-16097489)
chr7 (337-405)||(825638-825706)
chr7 (337-405)||(5397130-5397198)
chr7 (337-405)||(15916909-15916977)
chr7 (28-71)||(13434906-13434949)
chr7 (33-110)||(11483866-11483944)
chr7 (43-86)||(13731837-13731880)
chr7 (337-446)||(15206718-15206835)
chr7 (332-461)||(27291285-27291423)
chr7 (341-461)||(14221856-14221983)
chr7 (28-65)||(10204710-10204747)
chr7 (131-247)||(13434756-13434872)
chr7 (28-110)||(1613979-1614063)
chr7 (32-108)||(4316994-4317066)
chr7 (364-440)||(4791543-4791623)
chr7 (28-71)||(9194012-9194055)
chr7 (414-461)||(15348361-15348408)
chr7 (28-71)||(21005553-21005596)
chr7 (240-461)||(4312504-4312734)
chr7 (149-215)||(9264503-9264569)
chr7 (131-231)||(15522950-15523054)
chr7 (27-71)||(4307883-4307927)
chr7 (27-71)||(4313253-4313297)
chr7 (163-207)||(4465886-4465930)
chr7 (28-64)||(15173896-15173932)
chr7 (179-215)||(19515509-19515545)
[»] chr3 (48 HSPs)
chr3 (31-247)||(11869836-11870053)
chr3 (33-234)||(8685849-8686051)
chr3 (243-461)||(8686428-8686656)
chr3 (33-234)||(8531775-8531979)
chr3 (43-234)||(16703677-16703872)
chr3 (54-247)||(41545776-41545970)
chr3 (240-461)||(16703097-16703325)
chr3 (32-107)||(17023247-17023322)
chr3 (43-110)||(13069781-13069848)
chr3 (40-221)||(42244557-42244740)
chr3 (28-108)||(43842064-43842144)
chr3 (43-221)||(11398788-11398968)
chr3 (28-116)||(11577794-11577882)
chr3 (28-108)||(19656101-19656180)
chr3 (43-110)||(6236871-6236938)
chr3 (43-108)||(14494828-14494893)
chr3 (43-108)||(14976312-14976377)
chr3 (41-108)||(2721944-2722012)
chr3 (337-461)||(3339359-3339490)
chr3 (337-461)||(14445898-14446027)
chr3 (53-108)||(34053625-34053680)
chr3 (240-461)||(17045644-17045872)
chr3 (240-461)||(17047804-17048032)
chr3 (240-405)||(20225792-20225956)
chr3 (337-460)||(13601010-13601141)
chr3 (43-108)||(14660795-14660860)
chr3 (337-446)||(12776667-12776784)
chr3 (337-461)||(13195593-13195726)
chr3 (57-247)||(17041605-17041796)
chr3 (371-460)||(22637644-22637738)
chr3 (372-460)||(4382692-4382789)
chr3 (33-221)||(7908418-7908609)
chr3 (164-234)||(14659198-14659269)
chr3 (90-215)||(25054940-25055067)
chr3 (28-71)||(25765841-25765884)
chr3 (337-461)||(20560956-20561089)
chr3 (337-461)||(20563264-20563397)
chr3 (337-461)||(20565572-20565705)
chr3 (43-84)||(13605073-13605114)
chr3 (407-460)||(1992744-1992799)
chr3 (407-460)||(11398156-11398211)
chr3 (371-460)||(17387781-17387875)
chr3 (57-108)||(17050755-17050806)
chr3 (28-71)||(25055059-25055102)
chr3 (28-65)||(36076224-36076261)
chr3 (407-460)||(15024669-15024724)
chr3 (179-215)||(20225409-20225445)
chr3 (28-64)||(43496252-43496288)
[»] scaffold1559 (1 HSPs)
scaffold1559 (25-234)||(1286-1496)
[»] chr5 (33 HSPs)
chr5 (25-247)||(24166129-24166353)
chr5 (29-192)||(23029577-23029742)
chr5 (48-234)||(22170669-22170857)
chr5 (310-461)||(17412521-17412675)
chr5 (28-106)||(24214757-24214835)
chr5 (28-106)||(24220380-24220458)
chr5 (43-108)||(22942370-22942435)
chr5 (48-222)||(16676976-16677152)
chr5 (55-221)||(12410424-12410591)
chr5 (43-108)||(15059387-15059452)
chr5 (53-108)||(20915972-20916027)
chr5 (43-109)||(24165262-24165328)
chr5 (43-108)||(20169471-20169536)
chr5 (43-108)||(20967761-20967826)
chr5 (43-108)||(23343555-23343620)
chr5 (28-92)||(31057716-31057780)
chr5 (337-446)||(18484345-18484460)
chr5 (371-446)||(22317681-22317764)
chr5 (337-405)||(22855576-22855644)
chr5 (371-435)||(20916625-20916691)
chr5 (371-405)||(26847656-26847690)
chr5 (413-462)||(27270061-27270111)
chr5 (413-462)||(27270206-27270256)
chr5 (413-462)||(27270351-27270401)
chr5 (25-108)||(23114276-23114354)
chr5 (329-460)||(23600763-23600904)
chr5 (329-460)||(24219693-24219834)
chr5 (149-215)||(2953655-2953721)
chr5 (33-110)||(20738361-20738439)
chr5 (337-399)||(25116306-25116368)
chr5 (337-399)||(25175397-25175459)
chr5 (28-108)||(31758117-31758199)
chr5 (164-201)||(34223259-34223296)
[»] chr4 (43 HSPs)
chr4 (54-234)||(5513663-5513845)
chr4 (240-405)||(9488916-9489081)
chr4 (27-234)||(9487039-9487247)
chr4 (54-234)||(33331022-33331203)
chr4 (48-201)||(23793614-23793768)
chr4 (54-201)||(5675373-5675521)
chr4 (251-405)||(12515046-12515201)
chr4 (33-222)||(11922451-11922642)
chr4 (43-215)||(31593797-31593971)
chr4 (32-110)||(38652154-38652232)
chr4 (28-108)||(6518379-6518459)
chr4 (28-98)||(17168863-17168933)
chr4 (28-98)||(17174435-17174505)
chr4 (28-108)||(21102228-21102308)
chr4 (43-107)||(24125233-24125297)
chr4 (53-108)||(11888993-11889048)
chr4 (43-110)||(20059168-20059235)
chr4 (43-152)||(11902628-11902738)
chr4 (43-108)||(3355270-3355335)
chr4 (43-234)||(12345960-12346156)
chr4 (43-108)||(16951909-16951974)
chr4 (43-108)||(21275245-21275310)
chr4 (43-108)||(43701578-43701643)
chr4 (337-461)||(15865439-15865570)
chr4 (43-108)||(18287005-18287070)
chr4 (337-405)||(14654131-14654199)
chr4 (329-461)||(17485037-17485177)
chr4 (53-100)||(3772202-3772249)
chr4 (337-405)||(15409384-15409452)
chr4 (329-460)||(10630700-10630839)
chr4 (332-461)||(10650337-10650475)
chr4 (164-234)||(10731038-10731109)
chr4 (164-234)||(10944807-10944878)
chr4 (372-460)||(18081631-18081728)
chr4 (164-221)||(13622215-13622273)
chr4 (371-452)||(8092598-8092684)
chr4 (337-405)||(16682766-16682834)
chr4 (28-71)||(10731176-10731219)
chr4 (28-71)||(10944945-10944988)
chr4 (28-71)||(13622331-13622374)
chr4 (407-452)||(3354593-3354640)
chr4 (28-64)||(3391995-3392031)
chr4 (28-64)||(18080955-18080991)
[»] chr1 (38 HSPs)
chr1 (43-234)||(20860759-20860953)
chr1 (54-222)||(23298787-23298956)
chr1 (240-461)||(16382613-16382848)
chr1 (62-235)||(20899426-20899599)
chr1 (57-183)||(26194180-26194308)
chr1 (44-221)||(13799464-13799643)
chr1 (33-108)||(25405084-25405159)
chr1 (28-108)||(2386234-2386314)
chr1 (28-108)||(21792346-21792426)
chr1 (28-108)||(21784220-21784300)
chr1 (40-101)||(30819061-30819122)
chr1 (43-221)||(17716649-17716829)
chr1 (28-108)||(28206359-28206439)
chr1 (54-234)||(16384974-16385157)
chr1 (53-221)||(48256209-48256378)
chr1 (53-106)||(17986584-17986637)
chr1 (43-108)||(41802283-41802348)
chr1 (53-107)||(8648876-8648930)
chr1 (53-107)||(39286642-39286696)
chr1 (337-459)||(21784605-21784733)
chr1 (43-108)||(26134537-26134601)
chr1 (43-108)||(28207904-28207969)
chr1 (43-108)||(44538253-44538318)
chr1 (337-425)||(4027672-4027762)
chr1 (337-446)||(8947648-8947763)
chr1 (372-460)||(3989885-3989982)
chr1 (295-460)||(8653067-8653240)
chr1 (48-107)||(15346876-15346935)
chr1 (57-108)||(20412277-20412328)
chr1 (178-247)||(26192140-26192209)
chr1 (154-215)||(30819193-30819254)
chr1 (27-71)||(16431590-16431634)
chr1 (54-110)||(20493488-20493543)
chr1 (28-71)||(52235873-52235916)
chr1 (240-359)||(19364088-19364206)
chr1 (54-112)||(24680119-24680177)
chr1 (164-247)||(16431440-16431523)
chr1 (337-405)||(19875782-19875850)
[»] scaffold0855 (1 HSPs)
scaffold0855 (28-231)||(3352-3557)
[»] scaffold0847 (1 HSPs)
scaffold0847 (28-231)||(3517-3722)
[»] scaffold0014 (1 HSPs)
scaffold0014 (28-222)||(168089-168284)
[»] chr6 (68 HSPs)
chr6 (240-461)||(29686390-29686619)
chr6 (57-188)||(31965575-31965708)
chr6 (55-247)||(23348176-23348369)
chr6 (28-228)||(29682479-29682683)
chr6 (28-161)||(20222860-20222995)
chr6 (28-161)||(22116844-22116979)
chr6 (43-234)||(15172125-15172318)
chr6 (47-232)||(18973551-18973738)
chr6 (43-232)||(24392888-24393079)
chr6 (48-234)||(15471100-15471288)
chr6 (58-181)||(16207759-16207883)
chr6 (47-234)||(15162087-15162276)
chr6 (28-108)||(20221190-20221270)
chr6 (28-108)||(22115174-22115254)
chr6 (53-215)||(17793991-17794149)
chr6 (53-221)||(25949222-25949392)
chr6 (28-108)||(24218729-24218809)
chr6 (28-108)||(25402458-25402538)
chr6 (40-110)||(12660476-12660546)
chr6 (53-221)||(25963822-25963992)
chr6 (53-221)||(25968469-25968639)
chr6 (28-108)||(210137-210217)
chr6 (28-108)||(18448784-18448864)
chr6 (28-108)||(18844475-18844555)
chr6 (54-234)||(26821762-26821929)
chr6 (28-108)||(18854633-18854713)
chr6 (53-108)||(17743527-17743582)
chr6 (53-108)||(18233834-18233889)
chr6 (54-108)||(20464386-20464440)
chr6 (40-101)||(12658048-12658109)
chr6 (43-108)||(18195539-18195604)
chr6 (43-105)||(18184403-18184465)
chr6 (145-215)||(19612852-19612922)
chr6 (154-231)||(20221110-20221186)
chr6 (154-231)||(22115094-22115170)
chr6 (33-234)||(25339247-25339450)
chr6 (53-108)||(30245243-30245298)
chr6 (33-192)||(25923387-25923548)
chr6 (48-110)||(3923656-3923718)
chr6 (54-108)||(9414358-9414412)
chr6 (371-446)||(11203811-11203894)
chr6 (33-78)||(13217349-13217394)
chr6 (33-221)||(18627324-18627512)
chr6 (337-405)||(18731730-18731798)
chr6 (337-405)||(35270854-35270922)
chr6 (48-110)||(25031232-25031295)
chr6 (90-247)||(32543132-32543290)
chr6 (149-221)||(18993091-18993164)
chr6 (27-71)||(17284076-17284120)
chr6 (407-460)||(25631483-25631538)
chr6 (28-71)||(5399257-5399300)
chr6 (32-110)||(19612736-19612812)
chr6 (179-218)||(23524094-23524133)
chr6 (70-105)||(25507616-25507651)
chr6 (48-110)||(28734154-28734217)
chr6 (90-192)||(29093486-29093589)
chr6 (28-71)||(32543282-32543325)
chr6 (149-215)||(12658152-12658218)
chr6 (149-215)||(18396623-18396689)
chr6 (154-215)||(5399138-5399199)
chr6 (407-461)||(25963186-25963242)
chr6 (407-461)||(25967833-25967889)
chr6 (163-192)||(29686786-29686815)
chr6 (371-452)||(2181013-2181099)
chr6 (27-71)||(2197273-2197317)
chr6 (179-215)||(12660616-12660652)
chr6 (35-110)||(23517346-23517422)
chr6 (179-215)||(29253886-29253922)
[»] scaffold0001 (4 HSPs)
scaffold0001 (54-192)||(82631-82771)
scaffold0001 (240-461)||(83196-83422)
scaffold0001 (28-108)||(425024-425104)
scaffold0001 (48-198)||(520669-520821)
[»] scaffold0157 (2 HSPs)
scaffold0157 (251-405)||(5710-5865)
scaffold0157 (413-457)||(5882-5926)
[»] scaffold0074 (1 HSPs)
scaffold0074 (47-232)||(22753-22940)
[»] scaffold0088 (2 HSPs)
scaffold0088 (34-108)||(38505-38578)
scaffold0088 (240-461)||(37662-37888)
[»] scaffold1323 (1 HSPs)
scaffold1323 (28-108)||(1903-1983)
[»] scaffold0123 (2 HSPs)
scaffold0123 (28-108)||(2521-2601)
scaffold0123 (53-215)||(14007-14165)
[»] scaffold0094 (1 HSPs)
scaffold0094 (240-461)||(982-1211)
[»] scaffold1208 (1 HSPs)
scaffold1208 (29-108)||(1943-2022)
[»] scaffold0018 (1 HSPs)
scaffold0018 (31-108)||(18765-18842)
[»] scaffold0075 (1 HSPs)
scaffold0075 (28-108)||(19443-19523)
[»] scaffold0026 (1 HSPs)
scaffold0026 (28-108)||(13734-13814)
[»] scaffold0138 (2 HSPs)
scaffold0138 (28-110)||(27380-27462)
scaffold0138 (28-110)||(39376-39458)
[»] scaffold0447 (2 HSPs)
scaffold0447 (43-108)||(6431-6496)
scaffold0447 (43-108)||(11045-11110)
[»] scaffold0383 (1 HSPs)
scaffold0383 (43-108)||(9040-9105)
[»] scaffold0142 (2 HSPs)
scaffold0142 (31-108)||(21699-21776)
scaffold0142 (31-108)||(26846-26923)
[»] scaffold0471 (1 HSPs)
scaffold0471 (43-107)||(9821-9885)
[»] scaffold0037 (3 HSPs)
scaffold0037 (28-108)||(48407-48487)
scaffold0037 (332-405)||(72700-72773)
scaffold0037 (332-405)||(84890-84963)
[»] scaffold0031 (5 HSPs)
scaffold0031 (53-108)||(23277-23332)
scaffold0031 (43-110)||(100380-100447)
scaffold0031 (53-108)||(199-254)
scaffold0031 (53-108)||(77851-77906)
scaffold0031 (364-404)||(22619-22659)
[»] scaffold0011 (4 HSPs)
scaffold0011 (240-446)||(172066-172279)
scaffold0011 (43-108)||(163927-163992)
scaffold0011 (33-221)||(172633-172821)
scaffold0011 (337-440)||(161817-161926)
[»] scaffold0371 (1 HSPs)
scaffold0371 (43-108)||(9102-9167)
[»] scaffold0211 (1 HSPs)
scaffold0211 (43-108)||(17657-17722)
[»] scaffold0064 (1 HSPs)
scaffold0064 (43-108)||(48803-48868)
[»] scaffold0362 (2 HSPs)
scaffold0362 (53-103)||(9235-9285)
scaffold0362 (164-215)||(9293-9345)
[»] scaffold0197 (1 HSPs)
scaffold0197 (43-101)||(8877-8935)
[»] scaffold0168 (2 HSPs)
scaffold0168 (53-107)||(8878-8932)
scaffold0168 (179-215)||(9005-9041)
[»] scaffold0251 (1 HSPs)
scaffold0251 (43-108)||(18956-19021)
[»] scaffold0058 (1 HSPs)
scaffold0058 (28-108)||(61857-61937)
[»] scaffold0006 (1 HSPs)
scaffold0006 (43-103)||(33972-34032)
[»] scaffold0258 (1 HSPs)
scaffold0258 (337-446)||(22288-22405)
[»] scaffold0035 (1 HSPs)
scaffold0035 (337-446)||(50639-50756)
[»] scaffold0213 (1 HSPs)
scaffold0213 (43-110)||(21658-21726)
[»] scaffold0096 (1 HSPs)
scaffold0096 (28-108)||(37948-38028)
[»] scaffold0056 (1 HSPs)
scaffold0056 (337-405)||(42099-42167)
[»] scaffold0916 (1 HSPs)
scaffold0916 (53-108)||(3525-3580)
[»] scaffold0861 (1 HSPs)
scaffold0861 (333-446)||(722-841)
[»] scaffold0012 (2 HSPs)
scaffold0012 (53-107)||(49904-49958)
scaffold0012 (179-215)||(49794-49830)
[»] scaffold0512 (1 HSPs)
scaffold0512 (337-405)||(5094-5162)
[»] scaffold0218 (1 HSPs)
scaffold0218 (371-461)||(25625-25724)
[»] scaffold0084 (1 HSPs)
scaffold0084 (28-106)||(31666-31745)
[»] scaffold0078 (1 HSPs)
scaffold0078 (337-446)||(30452-30569)
[»] scaffold0278 (1 HSPs)
scaffold0278 (407-460)||(13216-13271)
[»] scaffold0375 (1 HSPs)
scaffold0375 (364-440)||(12550-12632)
[»] scaffold0264 (2 HSPs)
scaffold0264 (28-71)||(22425-22468)
scaffold0264 (179-215)||(22551-22587)
[»] scaffold0089 (1 HSPs)
scaffold0089 (339-402)||(54986-55049)
[»] scaffold0566 (1 HSPs)
scaffold0566 (371-405)||(2616-2650)
[»] scaffold0116 (1 HSPs)
scaffold0116 (371-405)||(37911-37945)
[»] scaffold0059 (1 HSPs)
scaffold0059 (409-460)||(12386-12439)
[»] scaffold0013 (1 HSPs)
scaffold0013 (409-460)||(232959-233012)
[»] scaffold0673 (1 HSPs)
scaffold0673 (28-64)||(3215-3251)
[»] scaffold0231 (1 HSPs)
scaffold0231 (28-111)||(21330-21413)


Alignment Details
Target: chr8 (Bit Score: 438; Significance: 0; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 438; E-Value: 0
Query Start/End: Original strand, 24 - 461
Target Start/End: Complemental strand, 22904693 - 22904256
Alignment:
Q  24 tatgaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgct 123  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22904693 tatgaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgct 22904594  T
Q  124 agctgcttatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaac 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22904593 agctgcttatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaac 22904494  T
Q  224 aggcagcttgtttgggaagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcatt 323  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22904493 aggcagcttgtttgggaagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcatt 22904394  T
Q  324 gttctaagcgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgctccaacctttttcttgc 423  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22904393 gttctaagcgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgctccaacctttttcttgc 22904294  T
Q  424 tcctgtgtaagagatattatgagaaaacaggttctaac 461  Q
    ||||||||||||||||||||||||||||||||||||||    
T  22904293 tcctgtgtaagagatattatgagaaaacaggttctaac 22904256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 25 - 247
Target Start/End: Original strand, 24221545 - 24221770
Alignment:
Q  25 atgaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgcta 124  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||  ||||||||||||    
T  24221545 atgaaagtaaataacaagaaaataaatatgaacttttattcaaagaaataattgtcacttagaatttccaagaacaaaaaatgattgtatatgtttgcta 24221644  T
Q  125 gctgct-tatttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagact-aa 221  Q
    | |||| ||||||||| ||| |||| |||| ||||| || |||| ||||||||||||||||||||||||| |||||||| ||||||||||||| ||| ||    
T  24221645 gttgctctatttatagtctaaaactaacttaagccctaagaaatccatcaatagaatgttccacaagaaaccatgggctttaggtcagaaataaactaaa 24221744  T
Q  222 acaggcagcttgtttgggaagcaaaa 247  Q
    | |||||||||| |  ||||||||||    
T  24221745 aaaggcagcttgatcaggaagcaaaa 24221770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 221
Target Start/End: Original strand, 14162161 - 14162340
Alignment:
Q  44 aaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcct 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||  ||||||||||||||||   | ||  |||||||| || |||||||||  |    
T  14162161 aaataaagatgaacttttattcaaataaacaattgtcacttattatttcagagaacaaaagatgatttgttgtgactgctagctactctatttatagttt 14162260  T
Q  143 ataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    | ||  |||| || || || ||||| |||| ||||||||||||||||||| ||||||| | |||||||| |||| |||||    
T  14162261 acaatgacttaagacctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcaggaataaactaa 14162340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 26013057 - 26012992
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26013057 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 26012992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 19792239 - 19792309
Alignment:
Q  40 aagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||||||    
T  19792239 aagaaaataaagatgaatttttatttaaagaaacaattgtcacttattatttccaagaactaaagatgatt 19792309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 23221529 - 23221693
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactact 151  Q
    |||||||||||||||||||||||||||||||||| |||| |||||| ||||||||| |   |||| | | ||||| || |||||||||  |||| | |||    
T  23221529 tgaacttttattcaaagaaacaattgtcacttattattttcaagaagaaaagatgaattgttatgatagttagctactctatttatagtttatatcgact 23221628  T
Q  152 ttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaata 215  Q
    | ||||  ||  ||||||||| |||||||||||||| |||| ||||||| | |||||||||||||    
T  23221629 taagccataagcaatacatcactagaatgttccacatgaaaccatgggcttttaggtcagaaata 23221693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 25397002 - 25396947
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25397002 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 25396947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 18162077 - 18162012
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  18162077 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 18162012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 33 - 222
Target Start/End: Complemental strand, 24342141 - 24341953
Alignment:
Q  33 aaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-t 131  Q
    ||||| ||||||||||||||   ||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||  | | | ||| |  ||||| |    
T  24342141 aaatagcaagaaaataaaga---acttttattaaaagaaacaattgtcacttattatttctaagaacaaaagatgattatacaagcttgatgactgctct 24342045  T
Q  132 atttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaa 222  Q
    ||||||||||||  | | |||| ||||| || ||||| |||| || | |||| ||||||| | ||| |||| ||||||||||||| ||||||    
T  24342044 atttatagcctaacattgacttaagccctaagaaataaatcactaaagtgttgcacaagacaccataggctttaggtcagaaataaactaaa 24341953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 43 - 222
Target Start/End: Complemental strand, 18008220 - 18008037
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaa-caattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagc 140  Q
    |||||||| | ||||||||||| ||||||| | ||||| |||  | | |||||||||||||||||||||   |  | ||||||||| || |||||||||     
T  18008220 aaaataaaaaagaacttttattaaaagaaaaccattgttactgttgaattccaagaacaaaagatgatttgttgcgattgctagctactctatttatagt 18008121  T
Q  141 ctataactactttagccccaa--taaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaa 222  Q
    ||| ||| |||| ||||||||  || ||| ||||||||||||||||||||| || |||||||| ||| ||||||||| ||||||    
T  18008120 ctacaacaacttaagccccaagatatatatatcaatagaatgttccacaaggaaccatgggctttagttcagaaataaactaaa 18008037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 23193979 - 23194034
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  23193979 tgaacttttattcaaagaaacaattgtcagttattatttccaagaacaaaagatga 23194034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 22370025 - 22369894
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtg 430  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||     
T  22370025 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgta 22369926  T
Q  431 taag--agatattatgagaaaacaggttctaac 461  Q
    ||||  ||||||||||||  |||||||||||||    
T  22369925 taagatagatattatgag-gaacaggttctaac 22369894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 17515806 - 17515870
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttc 92  Q
    |||| ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| |||||    
T  17515806 aaagaaaataacgagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttc 17515870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 310 - 462
Target Start/End: Original strand, 18573087 - 18573244
Alignment:
Q  310 tcctccaaggcattgttctaagcgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgc--- 406  Q
    ||||||||||| ||||| | | |||| ||| |||||||| |||||   || ||||||||| ||||||||||||||||| | | |||||||||| ||        
T  18573087 tcctccaaggctttgttttcatcgtacacttatcacaacctcaagtgcttctcatgaacctattcaacccaacaacaaatttcaagtgagtgtttgtgtg 18573186  T
Q  407 ---tccaacctttttcttgctcctgtgtaagagatattatgagaaaacaggttctaact 462  Q
       |||| | |||||||||| |||||||||||| ||||||||| |||||||||||||||    
T  18573187 tagtccagc-tttttcttgcacctgtgtaagaggtattatgaggaaacaggttctaact 18573244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 6279804 - 6279739
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||  ||||||||||||||||||||||||||||||||| |||||  ||| ||||||||||    
T  6279804 aaaataaaggagaacttttattcaaagaaacaattgtcacttattatttcagagagcaaaagatga 6279739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 14352340 - 14352437
Alignment:
Q  371 attcaacccaacaa-caagtcttaagtgagtgtgtgc----tccaacctttttcttgctcctgtgtaaga--gatattatgagaaaacaggttctaac 461  Q
    |||||||||||||| ||||||| |||||||||||||     ||||||| ||||||||||||||| |||||  ||||||||||| ||||||||||||||    
T  14352340 attcaacccaacaatcaagtctcaagtgagtgtgtgtgtagtccaacccttttcttgctcctgtataagatagatattatgaggaaacaggttctaac 14352437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 11347086 - 11347154
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||||||||||||||    
T  11347086 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtg 11347154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 14351659 - 14351714
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||||| |||||||||||||||| |||||  ||||||||||||||    
T  14351659 tgaacttttattcaaaggaacaattgtcacttattatttcatagaacaaaagatga 14351714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 14878317 - 14878367
Alignment:
Q  58 ttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||||||||||||||||| |||| |||||| |||||||||    
T  14878317 ttttattcaaagaaacaattgtcacttattattttcaagaagaaaagatga 14878367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 461
Target Start/End: Original strand, 22099783 - 22099921
Alignment:
Q  332 cgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtga--------gtgtgtgctccaacctttttcttgc 423  Q
    |||| |||||||||||||||||| ||| ||  | |||  ||||||||||||||||| ||||||||||        ||||||  ||||||| |||||||||    
T  22099783 cgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgtgtgtagtccaacccttttcttgc 22099882  T
Q  424 tcctgtgtaag--agatattatgagaaaacaggttctaac 461  Q
    |||||| ||||  ||||||||||||  |||||||||||||    
T  22099883 tcctgtataagatagatattatgag-gaacaggttctaac 22099921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 21831104 - 21831034
Alignment:
Q  332 cgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgt 402  Q
    |||| |||||||||||||||||| ||| ||  | |||  ||||||||||||||||| ||||||||||||||    
T  21831104 cgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgt 21831034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 22033683 - 22033753
Alignment:
Q  332 cgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgt 402  Q
    |||| |||||||||||||||||| ||| ||  | |||  ||||||||||||||||| ||||||||||||||    
T  22033683 cgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgt 22033753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 26854157 - 26854079
Alignment:
Q  33 aaataacaagaaaataaagat-gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    |||||||||||||||||| |  ||||||||||| ||  ||||||||||||||  | | |||||||||||||||||||||    
T  26854157 aaataacaagaaaataaaaaaagaacttttattaaagaaaacaattgtcactattgaattccaagaacaaaagatgatt 26854079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 460
Target Start/End: Complemental strand, 20375875 - 20375812
Alignment:
Q  399 gtgtgtgctccaacctttttcttgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||| ||||||| ||||||||||||||| ||||  |||||||||||| |||||| ||||||    
T  20375875 gtgtgtggtccaacccttttcttgctcctgtataagatagatattatgaggaaacagattctaa 20375812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 9317923 - 9317880
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  9317923 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 9317880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 164 - 222
Target Start/End: Complemental strand, 21139620 - 21139561
Alignment:
Q  164 aatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaa 222  Q
    ||||||||| ||||||||||||||||||| ||||| | | ||||||||||||| ||||||    
T  21139620 aatacatcactagaatgttccacaagaaaccatggacttttaggtcagaaataaactaaa 21139561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 110
Target Start/End: Complemental strand, 23503211 - 23503156
Alignment:
Q  56 acttttattcaaagaaacaattgtcactta-taatttccaagaacaaaagatgatt 110  Q
    ||||||||||||| ||||||||||| |||  | |||||||||||||||||||||||    
T  23503211 acttttattcaaacaaacaattgtccctttgttatttccaagaacaaaagatgatt 23503156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 215
Target Start/End: Complemental strand, 26854038 - 26853972
Alignment:
Q  149 actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| |||||||| || || |||| || | |||| ||||||||| ||||||||||||||||||||||    
T  26854038 acttgagccccaagaattaaatcactaaagtgttgcacaagaaaacatgggctctaggtcagaaata 26853972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 15636108 - 15636052
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||| ||||||||||| |||||||||  | |||| | |||||||||||||||||    
T  15636108 gaactttgattcaaagaaataattgtcacaaagaattcctaagaacaaaagatgatt 15636052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 15759659 - 15759615
Alignment:
Q  27 gaaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||| || ||||||||| ||||||||||||| |||||    
T  15759659 gaaagtaaataataataaaataaaggtgaacttttattccaagaa 15759615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 17620750 - 17620695
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||| ||||||||||||||| ||||  |||||||||||| ||||| |||||||    
T  17620750 tccaacccttttcttgctcctgtataagatagatattatgaggaaacatgttctaa 17620695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 160; Significance: 4e-85; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 20852217 - 20852006
Alignment:
Q  25 atgaaagtaaataacaagaaaataaagatgaactttt-attcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgct 123  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  20852217 atgaaagtaaataacaagaaaataaagatgaactttttattcaaagaaacaattgtcacttattatttcgaagaacaaaagatgatacaatatgtttgct 20852118  T
Q  124 agctgct-tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaa 222  Q
     |||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  20852117 cgctgctctatttatagcctataactacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgggctttaggtcagaaataaactaaa 20852018  T
Q  223 caggcagcttgt 234  Q
    ||||||||||||    
T  20852017 caggcagcttgt 20852006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 32 - 234
Target Start/End: Original strand, 19124333 - 19124536
Alignment:
Q  32 taaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct- 130  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||| | |||||||||||||||| ||     
T  19124333 taaacaacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattattttcatgaacaaaagatgaatgaatatgtttgctagctactc 19124432  T
Q  131 tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagc 230  Q
    ||||||||| ||| |||||||| |||||||| |||| ||||||||||||||| ||||||||| |||||||| || |||| ||||| |||||| |||||||    
T  19124433 tatttatagtctaaaactacttaagccccaagaaatgcatcaatagaatgtttcacaagaaaccatgggctttatgtcataaataaactaaataggcagc 19124532  T
Q  231 ttgt 234  Q
    ||||    
T  19124533 ttgt 19124536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 23257021 - 23257215
Alignment:
Q  43 aaaataaagatgaacttttattcaaag--aaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatag 139  Q
    |||||||||||||||||||||||||||  ||||||||||||||  ||| |||||||||||| ||||||||||||||||||||||||| || |||||||||    
T  23257021 aaaataaagatgaacttttattcaaagcaaaacaattgtcactattaaattccaagaacaagagatgattcaatatgtttgctagctactctatttatag 23257120  T
Q  140 cctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgt 234  Q
      || |||||||| |||| ||| |||||||||||||||||||||||||||||| ||||| || ||||||||||||| |||||||||| |||||||    
T  23257121 tttacaactacttaagccacaagaaatacatcaatagaatgttccacaagaaaccatggactttaggtcagaaataaactaaacaggaagcttgt 23257215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 48 - 234
Target Start/End: Complemental strand, 24321868 - 24321680
Alignment:
Q  48 aaagatgaacttttattcaaagaaacaattgtcacttat-aatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctata 145  Q
    ||||| ||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||| || |||| ||||||||| ||| |    
T  24321868 aaagaagaacttttactcaaataaacaattgtcacttattaatttccaagaacaaaagatgattgaatatgtttgccaggtgctctatttatagtctaca 24321769  T
Q  146 actactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgt 234  Q
    ||||||| | |||||| ||||||||||||||||| |||||||||||| |||||||| || |||||||||| | ||||||||||||||||    
T  24321768 actacttaaaccccaacaaatacatcaatagaatattccacaagaaaccatgggctttacgtcagaaataaattaaacaggcagcttgt 24321680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 40 - 234
Target Start/End: Original strand, 19013041 - 19013231
Alignment:
Q  40 aagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttata 138  Q
    |||||||||| ||||||||||||||||||||||||||||||||||       ||||||||||||||||||| |||||||||| |||||||| ||||||||    
T  19013041 aagaaaataatgatgaacttttattcaaagaaacaattgtcactt-------ccaagaacaaaagatgattgaatatgtttgttagctgctctatttata 19013133  T
Q  139 gcctataactactttagccccaataaatacatcaata-gaatgttccacaagaaatcatgggctctaggtcagaaatagact-aaacaggcagcttgt 234  Q
    | ||| |||||||| |||||||| ||||||||||||| ||||||||||||||||| ||||| || ||||||||||||| ||| ||| |||||||||||    
T  19013134 gtctacaactacttaagccccaagaaatacatcaataggaatgttccacaagaaaccatggactttaggtcagaaataaactaaaataggcagcttgt 19013231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 240 - 405
Target Start/End: Complemental strand, 24321346 - 24321181
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcattgttctaagcgtaaact 339  Q
    |||||||| || |||||||||| | ||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| ||||| ||   ||| |||    
T  24321346 aagcaaaaggcgtaaacattagtagcataaacaagatttaacatatgacaactttattaaaattcatgtctcctccaaggctttgttttagtggtacact 24321247  T
Q  340 aatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||||||    
T  24321246 aatcacaacttcaagcatttctcatgaacctattcaacccaacaacaagtctcaaatgagtgtgtg 24321181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 240 - 401
Target Start/End: Complemental strand, 20851766 - 20851605
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcattgttctaagcgtaaact 339  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| ||| |||||||| ||||||| ||||||||||||||| |||||  |||||||  ||    
T  20851766 aagcaaaatgcataaaaattagcagcataaacaagatttaacatttgataacattattaaaactcgtgtctcctccaaggctttgtttcaagcgtaccct 20851667  T
Q  340 aatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtg 401  Q
    |||| |||| |||||||||| ||||||||| ||||||||||||| ||||||| |||||||||    
T  20851666 aatcgcaacatcaagcatttctcatgaacctattcaacccaacatcaagtctcaagtgagtg 20851605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 28 - 198
Target Start/End: Original strand, 24371437 - 24371609
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagct 127  Q
    ||||||| ||||||||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    ||||||||||||| |    
T  24371437 aaagtaattaacaagaaaatagaga-gaaattttattcaaagaaacaattgtcacttataaattccaagaacaaaagatgaaaatatatgtttgctagat 24371535  T
Q  128 gct-tatttatagcctataact-actttagcccc-aataaatacatcaatagaatgttccacaagaaatcatgg 198  Q
    ||| ||||||||| ||| |||| |||| |||||| || |||||||||||||||||||||||||||||| |||||    
T  24371536 gctctatttatagtctaaaactaacttaagccccaaagaaatacatcaatagaatgttccacaagaaaccatgg 24371609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 20282119 - 20281949
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactact 151  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |   | || | || |||| || ||||||||| ||||| | |||    
T  20282119 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttgtgatagccagctactctatttatagtctatatcgact 20282020  T
Q  152 ttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    | | ||| ||  ||||||||| ||||||||||||||||||| || |||| | ||||||||||||| |||||    
T  20282019 taaaccctaagcaatacatcactagaatgttccacaagaaaccaagggcttttaggtcagaaataaactaa 20281949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 24820599 - 24820676
Alignment:
Q  31 gtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  24820599 gtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcccttattatttcaaagaacaaaagatga 24820676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 24824981 - 24825061
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||  ||||||||||||||    
T  24824981 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcccttattatttcagagaacaaaagatga 24825061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 16134203 - 16134268
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  16134203 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcaaagaacaaaagatga 16134268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 53 - 110
Target Start/End: Complemental strand, 23340648 - 23340591
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23340648 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgatt 23340591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 459
Target Start/End: Original strand, 25582878 - 25583032
Alignment:
Q  310 tcctccaaggcattgttctaagcgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgc--- 406  Q
    ||||||||||||||||  | |||||| |||  ||||||  ||||| | || ||||||||| ||||||||||||||||| | | |||||||||||||        
T  25582878 tcctccaaggcattgtgttcagcgtacacttctcacaaactcaagtacttatcatgaacctattcaacccaacaacaaatttcaagtgagtgtgtgtgtg 25582977  T
Q  407 ---tccaacctttttcttgctcctgtgtaagagatattatgagaaaacaggttcta 459  Q
       |||||| |||||||||| |||||||||||| ||||||||||||||||||||||    
T  25582978 tagtccaac-tttttcttgcgcctgtgtaagaggtattatgagaaaacaggttcta 25583032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 42767369 - 42767449
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  | ||||||||||||    
T  42767369 aaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagataacaaaagatga 42767449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 24019195 - 24019326
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg--------ctccaacctttttcttgctcctg 428  Q
    |||||| |||| |||||| |||| ||||||||| ||||||||||||||||||| | |||||||||||||         ||| | ||||||||||| ||||    
T  24019195 actaattacaatttcaagtatttctcatgaacctattcaacccaacaacaagtttcaagtgagtgtgtgtgtgtgtagtcc-agctttttcttgcgcctg 24019293  T
Q  429 tgtaagagatattatgagaaaacaggttctaac 461  Q
    |||||||||||||||||| ||||||||||||||    
T  24019294 tgtaagagatattatgaggaaacaggttctaac 24019326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 53 - 235
Target Start/End: Complemental strand, 15583876 - 15583691
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcct-ataactac 150  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||    | | ||||| | |||||| ||||||||| || | ||  ||    
T  15583876 tgaacttttattcaaagaaacagttgtcacttattatttccaagaacaaaagatgagaatacaagtttggtcgctgctctatttatagtctaacaatgac 15583777  T
Q  151 tttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagact-aaacaggcagcttgtt 235  Q
    || | ||| || ||||| |||| |  | |||| ||||||||| |||||||| ||||||||||||| ||| ||| ||||||||||||    
T  15583776 ttaaaccctaagaaataaatcactgaagtgttgcacaagaaaccatgggctttaggtcagaaataaactaaaataggcagcttgtt 15583691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 19929462 - 19929397
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  19929462 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 19929397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 539274 - 539207
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  | ||||||||||||||    
T  539274 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagaaaacaaaagatgatt 539207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 24171427 - 24171296
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtg 430  Q
    ||||||||||||||| || |||  |  ||||||||||||||||||||||||||||||||||||||||||       ||||||  |||||||||||||||     
T  24171427 actaatcacaacttcgagtattccttgtgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgtgtgtagtccaactcttttcttgctcctgta 24171328  T
Q  431 taag--agatattatgagaaaacaggttctaac 461  Q
    ||||  ||||||||||| | |||||||||||||    
T  24171327 taagatagatattatga-agaacaggttctaac 24171296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 5499785 - 5499850
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||   ||||||||||||||    
T  5499785 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattattttagagaacaaaagatga 5499850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 25481460 - 25481412
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataattt 91  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  25481460 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattattt 25481412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 91
Target Start/End: Complemental strand, 25489066 - 25489018
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataattt 91  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  25489066 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattattt 25489018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 24023858 - 24023930
Alignment:
Q  32 taaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||| |||||||||||||    ||||||||||||||||||| | ||||||| || ||||||||||||||||||||||    
T  24023858 taaagaacaagaaaataa----gaacttttattcaaagaaatagttgtcacataaaatttccaagaacaaaagatga 24023930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 15532852 - 15532696
Alignment:
Q  310 tcctccaaggcattgttctaagcgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgc--- 406  Q
    ||||||||||| ||||| | |||||| ||| |||| ||  |||||   || | ||||||| ||||||||||||||||||| | |||||||||||||        
T  15532852 tcctccaaggctttgttttcagcgtacacttatcaaaaactcaagtgcttcttatgaacctattcaacccaacaacaagtttcaagtgagtgtgtgtgtg 15532753  T
Q  407 ---tccaacctttttcttgctcctgtgtaagagatattatgagaaaacaggttctaac 461  Q
       |||| | |||||||||  ||| |||||||||||||||||| ||||||||||||||    
T  15532752 tagtccagc-tttttcttgagcctatgtaagagatattatgaggaaacaggttctaac 15532696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 259 - 384
Target Start/End: Original strand, 25337707 - 25337830
Alignment:
Q  259 tagcaacataaacaagatttaacatatgacaacattatcaaaa-ctcatgtctcctccaaggcattgttctaagcgtaaactaatcacaacttcaagcat 357  Q
    ||||| ||||||||| |||||||||| |||||||| || |||| ||  ||||||||||||||| |  ||  ||| ||| ||||||||  |||||||||||    
T  25337707 tagcagcataaacaa-atttaacataggacaacataattaaaaacttttgtctcctccaaggcttcatttcaagtgtacactaatca--acttcaagcat 25337803  T
Q  358 ttttcatgaaccaattcaacccaacaa 384  Q
    || | ||||||| ||||||||||||||    
T  25337804 ttcttatgaacctattcaacccaacaa 25337830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 22578380 - 22578434
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||||||| | ||||||| || ||||||||| ||||||||||||    
T  22578380 gaacttttattcaaagaaatagttgtcacataaaatttccaaaaacaaaagatga 22578434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 405
Target Start/End: Original strand, 26191803 - 26191837
Alignment:
Q  371 attcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||||||||||||||||||||    
T  26191803 attcaacccaacaacaagtcttaagtgagtgtgtg 26191837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 27768944 - 27769014
Alignment:
Q  332 cgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgt 402  Q
    |||| |||||||||||||||||| ||| ||  | |||  ||||||||||||||||| ||||||||||||||    
T  27768944 cgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgt 27769014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 364 - 405
Target Start/End: Complemental strand, 23648025 - 23647984
Alignment:
Q  364 tgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  23648025 tgaacctattcaacccaacaacaagtctcaagtgagtgtgtg 23647984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 387
Target Start/End: Complemental strand, 29955821 - 29955744
Alignment:
Q  310 tcctccaaggcattgttctaagcgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaa 387  Q
    ||||||||||| |||||   |||| | |||||||||||| |||||  ||| ||||||||| |||||||||||||||||    
T  29955821 tcctccaaggctttgtttccagcggacactaatcacaacctcaagtgtttctcatgaacctattcaacccaacaacaa 29955744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 25337156 - 25337236
Alignment:
Q  33 aaataacaagaaaataaa-gatgaacttttattcaaagaaa-caattgtcacttataatttccaagaacaaaagatgattc 111  Q
    ||||||||||||| |||| || ||||||||||| | ||||| |||||||||||  | | ||||||||||||||||||||||    
T  25337156 aaataacaagaaattaaaagaagaacttttattaagagaaaacaattgtcactattgaattccaagaacaaaagatgattc 25337236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 459
Target Start/End: Original strand, 25338255 - 25338307
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaagagatattatgagaaaacaggttcta 459  Q
    ||||||| ||||||||||||||| ||||| |||||| ||| ||||||||||||    
T  25338255 tccaacccttttcttgctcctgtataagatatattaagaggaaacaggttcta 25338307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 21436 - 21574
Alignment:
Q  54 gaacttttattcaaagaa-acaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactact 151  Q
    ||||||||||| |||||| ||||||||||||  | | ||||||||||||||||||| ||  | || | ||||||| || ||||||||| ||| ||  |||    
T  21436 gaacttttatt-aaagaagacaattgtcactatttaattccaagaacaaaagatgaatcgttgtgatagctagctactctatttatagtctacaatgact 21534  T
Q  152 ttagccccaataaatacatcaatagaatgttccacaagaa 191  Q
    | ||||| || ||||| | || ||||||||||||||||||    
T  21535 taagccctaagaaatataacactagaatgttccacaagaa 21574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 11391189 - 11391146
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  11391189 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 11391146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 11407850 - 11407807
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  11407850 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 11407807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 24507390 - 24507347
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||    
T  24507390 aaaggaaataacaataaaataaagatgaacttttattccaagaa 24507347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 460
Target Start/End: Original strand, 25144884 - 25145025
Alignment:
Q  329 aagcgtaaactaatcacaacttcaagcatttttcatgaacca-attcaacccaacaa-caagtcttaagtgagtgtgtgc------tccaacctttttct 420  Q
    ||||||| |||||||||||  |||||||||| |  | ||||  |||||||||||||| ||||| | |||||||||||||       ||||||| ||||||    
T  25144884 aagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtgtagtccaacccttttct 25144983  T
Q  421 tgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||||| ||||  |||||||||||| ||||| |||||||    
T  25144984 tgctcctgtataagatagatattatgaggaaacatgttctaa 25145025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 24018636 - 24018690
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||||||| | ||||||| || |||| |||||||||||| ||||    
T  24018636 gaacttttattcaaagaaatagttgtcacataaaattcccaagaacaaaacatga 24018690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 19805833 - 19805882
Alignment:
Q  413 ctttttcttgctcctgtgtaagagatattatgagaaaacaggttctaact 462  Q
    |||||| |||| ||||||||| || ||||||||| |||||||||||||||    
T  19805833 ctttttattgcgcctgtgtaaaaggtattatgaggaaacaggttctaact 19805882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 273
Target Start/End: Original strand, 23257607 - 23257640
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaa 273  Q
    |||||||| |||||||||||||||||||||||||    
T  23257607 aagcaaaaggcataaacattagcaacataaacaa 23257640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 446
Target Start/End: Complemental strand, 24321168 - 24321135
Alignment:
Q  413 ctttttcttgctcctgtgtaagagatattatgag 446  Q
    ||||||||||||||||||||| ||||||||||||    
T  24321168 ctttttcttgctcctgtgtaaaagatattatgag 24321135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 65
Target Start/End: Original strand, 32441367 - 32441404
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattc 65  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  32441367 aaagtaaataacaataaaataaaggtgaacttttattc 32441404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 23139992 - 23140036
Alignment:
Q  27 gaaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||    
T  23139992 gaaagtaaataacaataaaataaaggggaacttttattccaagaa 23140036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 23295743 - 23295779
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttatt 64  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  23295743 aaagtaaataacaagaaagtaaaggtgaacttttatt 23295779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 23551782 - 23551826
Alignment:
Q  27 gaaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    ||||||||||||||| |||||||||  |||||||||||| |||||    
T  23551782 gaaagtaaataacaataaaataaaggggaacttttattccaagaa 23551826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 24502162 - 24502107
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||| ||||||||||||||| ||||  |||||||||||| ||||| |||||||    
T  24502162 tccaacccttttcttgctcctgtataagatagatattatgaggaaacatgttctaa 24502107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 460
Target Start/End: Original strand, 25371099 - 25371154
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||| ||||||||||||||| ||||  |||||||||||| ||||| |||||||    
T  25371099 tccaacccttttcttgctcctgtataagatagatattatgaggaaacaagttctaa 25371154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 25858656 - 25858692
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttatt 64  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  25858656 aaagtaaataacaataaaataaaggtgaacttttatt 25858692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 25858786 - 25858822
Alignment:
Q  179 tgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  25858786 tgttgcacaagaaaccatgggctctaggtcagaaata 25858822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 153; Significance: 7e-81; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 31 - 234
Target Start/End: Original strand, 4983151 - 4983355
Alignment:
Q  31 gtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct 130  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  4983151 gtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgattgaatatgtttgctagctgct 4983250  T
Q  131 -tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcag 229  Q
     ||||||||| ||| |||||||| |||||||| ||||||||||||| |||||||||||||||| || ||||| ||||||||||||| |||||||||||||    
T  4983251 ctatttataggctacaactacttaagccccaagaaatacatcaatataatgttccacaagaaaccacgggctttaggtcagaaataaactaaacaggcag 4983350  T
Q  230 cttgt 234  Q
    |||||    
T  4983351 cttgt 4983355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 28 - 229
Target Start/End: Complemental strand, 38877493 - 38877290
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagct 127  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||| ||    
T  38877493 aaagtaaataacaagaaagtaaaga-gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctatct 38877395  T
Q  128 gct-tatttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaaca 224  Q
    ||| ||||||||||||| |||| |||| |||||||| || ||||||||||||||||||||||||||| ||||||| | || ||||||| || |||||| |    
T  38877394 gctctatttatagcctaaaactaacttaagccccaagaattacatcaatagaatgttccacaagaaaccatgggcttttaagtcagaattacactaaaaa 38877295  T
Q  225 ggcag 229  Q
    |||||    
T  38877294 ggcag 38877290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 43 - 247
Target Start/End: Complemental strand, 17911668 - 17911462
Alignment:
Q  43 aaaataaagatgaacttttattcaaag-aaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagc 140  Q
    ||||||||||||||||||||||||||| |||||||||| |||  |||||||||||||||| |||||||||||||| |||||||||| || |||||||||     
T  17911668 aaaataaagatgaacttttattcaaaggaaacaattgtaactattaatttccaagaacaagagatgattcaatatatttgctagctactctatttatagt 17911569  T
Q  141 ctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgtttggga 240  Q
     ||  ||||||| |||||||| |||||||||||||||||||||||||||||| ||   ||| ||||||||||||| |||||| |||||||||||  | ||    
T  17911568 ttacgactacttaagccccaagaaatacatcaatagaatgttccacaagaaaccacaagctttaggtcagaaataaactaaataggcagcttgtcagaga 17911469  T
Q  241 agcaaaa 247  Q
    |||||||    
T  17911468 agcaaaa 17911462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 29 - 234
Target Start/End: Complemental strand, 4541248 - 4541043
Alignment:
Q  29 aagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctg 128  Q
    |||||||||| || ||||||| | |||||||||||||||||||||||||||||||||| |||| || |||| |||||||| | ||| ||||||||| |||    
T  4541248 aagtaaataataataaaataagg-tgaacttttattcaaagaaacaattgtcacttattatttgcacgaacgaaagatgaatgaatgtgtttgctaactg 4541150  T
Q  129 ct-tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggc 227  Q
    || ||||||||| ||| |||||||| |||||||| ||||||||||||||| ||||||||||||||  |||| || ||||||| ||||| |||||| ||||    
T  4541149 ctctatttatagtctacaactacttaagccccaagaaatacatcaatagagtgttccacaagaaactatggactttaggtcacaaataaactaaataggc 4541050  T
Q  228 agcttgt 234  Q
    | |||||    
T  4541049 accttgt 4541043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 43 - 233
Target Start/End: Original strand, 30063962 - 30064157
Alignment:
Q  43 aaaataaagatgaacttttattcaaag--aaacaattgtcacttataatttccaagaacaaaaga--tgattcaatatgtttgctagctgct-tatttat 137  Q
    |||||||||||||||||||||||||||  ||||||||||||||  ||| ||||||||||| ||||  | ||||||||||||||||||||  | |||||||    
T  30063962 aaaataaagatgaacttttattcaaaggaaaacaattgtcactattaaattccaagaacacaagagataattcaatatgtttgctagctattctatttat 30064061  T
Q  138 agcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttg 233  Q
    || ||  |||||||| ||| |||| |||||||||||| ||||||||||||||||| |||||||| ||||||||||||| ||| || ||| ||||||    
T  30064062 agtctgcaactacttaagcaccaagaaatacatcaatggaatgttccacaagaaaccatgggctttaggtcagaaatatacttaataggaagcttg 30064157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 40 - 234
Target Start/End: Original strand, 17206405 - 17206600
Alignment:
Q  40 aagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttata 138  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| |   | || ||||||||| || ||||||||    
T  17206405 aagaaaataaagatgaacttttattcaaagagacaattgtcacttattatttccaagaacaaaagatgaattgttgtgattgctagctactctatttata 17206504  T
Q  139 gcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaacaggcagcttgt 234  Q
    |  || ||  |||| ||||| || ||||| |||| ||||||||||||||||||| || |||| | ||||||||||||| ||| |||||| |||||||    
T  17206505 gtttacaatgacttaagccctaagaaatatatcactagaatgttccacaagaaaccacgggcatttaggtcagaaataaact-aacaggtagcttgt 17206600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 28 - 213
Target Start/End: Original strand, 679497 - 679685
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagct 127  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||    | | || ||||||||    
T  679497 aaagtaaataacaagaaaataaagaagaacttttattcaaagaaataattgtcacttagaattttcaagaacaaaagatgagattacaagtctgctagct 679596  T
Q  128 gct-tatttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaag-aaatcatgggctctaggtcagaaa 213  Q
    |||   ||||||||||| |||| |||| ||||| || ||||  |||| |||||||||||||||| ||  |||||||| ||||| |||||    
T  679597 gctccttttatagcctaaaactaacttaagccctaagaaattaatcactagaatgttccacaagcaacccatgggctttaggttagaaa 679685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 40 - 221
Target Start/End: Complemental strand, 33609795 - 33609612
Alignment:
Q  40 aagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgc-ttatttata 138  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||| |   |||| | |||| || | |||||||||    
T  33609795 aagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaattgttatgatagctatctactttatttata 33609696  T
Q  139 gcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    | ||||| | |||| ||||| ||  ||||||||| |||||||||||| |||||| |||| || | |||||| |||||| |||||    
T  33609695 gtctatatcgacttaagccctaagcaatacatcactagaatgttccaaaagaaaccatgtgcttttaggtctgaaataaactaa 33609612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 240 - 460
Target Start/End: Original strand, 4461280 - 4461510
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagattta-acatatgacaacattatc-aaaactcatgtctcctccaaggcattgttctaagcgtaaa 337  Q
    |||||||| ||||||||||  ||| ||||||||||||| | | |||||||||||  ||  |||||| |||||||||||||||  |  ||  ||| ||| |    
T  4461280 aagcaaaaggcataaacatg-gcagcataaacaagattaatatatatgacaacacaattgaaaacttatgtctcctccaaggtttcattacaagtgtaca 4461378  T
Q  338 ctaatcacaacttcaagcatttttcatgaa-ccaattcaacccaacaacaagtcttaagtgagtgtgtg--------ctccaacctttttcttgctcctg 428  Q
    ||||||||| |||||||||||| ||||||| || ||||||||||||||||||||| |||||||||||||         |||| || ||||||||||||||    
T  4461379 ctaatcacatcttcaagcatttctcatgaaacctattcaacccaacaacaagtctcaagtgagtgtgtgtgtgtgtagtccagcccttttcttgctcctg 4461478  T
Q  429 tgtaagagatattatgagaaaacaggttctaa 460  Q
    | |||||||||||||||| |||||||||||||    
T  4461479 tataagagatattatgaggaaacaggttctaa 4461510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 4460765 - 4460842
Alignment:
Q  33 aaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4460765 aaataacaataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgatt 4460842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 782773 - 782853
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  782773 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 782853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 12562029 - 12561949
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  12562029 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 12561949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 16076825 - 16076905
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  16076825 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 16076905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 5840757 - 5840677
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |||||| ||||||||| ||||    
T  5840757 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacagttgtcacttattatttccgagaacaaaatatga 5840677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 12567724 - 12567644
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| ||||  |||||||||||||||    
T  12567724 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacatattatttaaaagaacaaaagatga 12567644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 3376509 - 3376576
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  3376509 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattacttccaagaacaaaagatgatt 3376576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 240 - 389
Target Start/End: Original strand, 6713106 - 6713256
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaa-aactcatgtctcctccaaggcattgttctaagcgtaaac 338  Q
    |||||||| ||||||||||||||| ||| ||||| ||||||||| ||||||||  || || ||||  ||||| ||| ||||| ||||| | |||||| ||    
T  6713106 aagcaaaaggcataaacattagcagcattaacaacatttaacatgtgacaacacaattaagaacttttgtctactctaaggctttgttttcagcgtatac 6713205  T
Q  339 taatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagt 389  Q
    ||||||||| |||||| |||| | ||||||| |||||||||||||| ||||    
T  6713206 taatcacaaattcaagtatttcttatgaacctattcaacccaacaagaagt 6713256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 41722770 - 41722715
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41722770 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 41722715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 9264406 - 9264460
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatg 107  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  9264406 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatg 9264460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 43 - 247
Target Start/End: Original strand, 35964233 - 35964438
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcc 141  Q
    |||||||||  ||||||||||||||||||||||||||||||||| |||||  |||||||||||||| |   | || | ||||||| || |||||||||      
T  35964233 aaaataaaggggaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgaatatttgtgatggctagctactctatttatagta 35964332  T
Q  142 tataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaacaggcagcttgtttggga 240  Q
    |||| | |||| |  || ||  ||||||||| ||||||||||||||| ||| || |||| | ||||||||||||| ||| || |||||||||||  || |    
T  35964333 tatatcgacttaaaacctaagcaatacatcactagaatgttccacaaaaaaccaagggcttttaggtcagaaataaact-aataggcagcttgtccggaa 35964431  T
Q  241 agcaaaa 247  Q
    |||||||    
T  35964432 agcaaaa 35964438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 8787293 - 8787358
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  8787293 aaaataaaggtgaaattttattcaaagaaacaattgtcacttattattttcaagaacaaaagatga 8787358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 14941741 - 14941806
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  14941741 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 14941806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 15369334 - 15369399
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  15369334 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 15369399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 15707252 - 15707317
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  15707252 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 15707317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 33612281 - 33612346
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  33612281 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 33612346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 48355597 - 48355662
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||    
T  48355597 aaaataaaggtgaacttttattcaaataaacaattgtcacttattatttcaaagaacaaaagatga 48355662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 17946792 - 17946737
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  17946792 tgaacttttattcaaagaaacaattgacacttattatttccaagaacaaaagatga 17946737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 4465812 - 4465874
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatat 116  Q
    ||||||||||||||||||||||||||||||  |||||||  ||||||||||||||||||||||    
T  4465812 gaacttttattcaaagaaacaattgtcactattaatttcagagaacaaaagatgattcaatat 4465874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 648798 - 648863
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| | |||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  648798 aaaataaaggttaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 648863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 9004702 - 9004637
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| ||||||||||||||||||| |||||||||||||| |||||  ||||||||||||||    
T  9004702 aaaataaaggtgaacttttattcaaagaaccaattgtcacttattatttcagagaacaaaagatga 9004637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 8780430 - 8780485
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  8780430 tgaacttttattcaaagaaacaattataacttattatttccaagaacaaaagatga 8780485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 48340615 - 48340670
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  48340615 tgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 48340670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 16097427 - 16097489
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaaga 105  Q
    ||||||||| |||||||||||||||||||||||||||||||| | |||||  |||||||||||    
T  16097427 aaaataaaggtgaacttttattcaaagaaacaattgtcacttcttatttcagagaacaaaaga 16097489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 825706 - 825638
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||||||||||||||    
T  825706 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtg 825638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 5397198 - 5397130
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||||||||||||||    
T  5397198 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtg 5397130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 15916909 - 15916977
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||||||||||||||    
T  15916909 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtg 15916977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 13434949 - 13434906
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  13434949 aaagtaaataacaataaaataaagatgaacttttattcaaagaa 13434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 33 - 110
Target Start/End: Original strand, 11483866 - 11483944
Alignment:
Q  33 aaataacaagaaaataaagatgaacttttattcaaag-aaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    |||||||||||||||||||| |||||||| || |||| |||||||||||| |  | | |||||||||||||||||||||    
T  11483866 aaataacaagaaaataaagaagaacttttgttgaaagaaaacaattgtcattattgaattccaagaacaaaagatgatt 11483944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 86
Target Start/End: Complemental strand, 13731880 - 13731837
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttat 86  Q
    ||||||| | ||||||||||||||||||||||||||||||||||    
T  13731880 aaaataacggtgaacttttattcaaagaaacaattgtcacttat 13731837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 15206718 - 15206835
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtg 430  Q
    |||||| ||||||||||| |||  |  |||||  |||||||||||||||||||||||| ||||||||||       ||||||| |||||||||||||||     
T  15206718 actaattacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaaatgagtgtgtgtgtgtagtccaacccttttcttgctcctgta 15206817  T
Q  431 taag--agatattatgag 446  Q
    ||||  ||||||||||||    
T  15206818 taagatagatattatgag 15206835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 461
Target Start/End: Complemental strand, 27291423 - 27291285
Alignment:
Q  332 cgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtga--------gtgtgtgctccaacctttttcttgc 423  Q
    |||| |||||||||||||||||| ||| ||  | |||  ||||||||||||||||| ||||||||||        ||||||  ||||||| |||||||||    
T  27291423 cgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgtgtgtagtccaacccttttcttgc 27291324  T
Q  424 tcctgtgtaag--agatattatgagaaaacaggttctaac 461  Q
    |||||| ||||  ||||||||||||  |||||||||||||    
T  27291323 tcctgtataagatagatattatgag-gaacaggttctaac 27291285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 461
Target Start/End: Original strand, 14221856 - 14221983
Alignment:
Q  341 atcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtgtaag 434  Q
    |||||||||||||| |||  |  | |||| |||||||||||||| |||||| |||||||||||||       ||||||| ||||||||||||||| ||||    
T  14221856 atcacaacttcaagtattccttgtaaacctattcaacccaacaagaagtctcaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgtataag 14221955  T
Q  435 --agatattatgagaaaacaggttctaac 461  Q
      ||||||||||||  |||||||||||||    
T  14221956 atagatattatgag-gaacaggttctaac 14221983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 10204747 - 10204710
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattc 65  Q
    |||||||||||||| |||||||||||||||||||||||    
T  10204747 aaagtaaataacaataaaataaagatgaacttttattc 10204710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 13434872 - 13434756
Alignment:
Q  131 tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaacaggcag 229  Q
    ||||||||| ||||||| ||||||  || ||  ||||||||| ||||||||||||||| ||| || |||| | ||||||||||||| ||| || ||| ||    
T  13434872 tatttatagtctataacgactttaaacctaagcaatacatcactagaatgttccacaataaaccaagggcttataggtcagaaataaact-aataggtag 13434774  T
Q  230 cttgtttgggaagcaaaa 247  Q
    |||||  |||||||||||    
T  13434773 cttgtccgggaagcaaaa 13434756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 1614063 - 1613979
Alignment:
Q  28 aaagtaaataacaagaaaataaagat-gaacttttattcaaagaaacaattgtcacttata-atttccaagaacaaaagatgatt 110  Q
    ||||||||||||||  |||||||||  ||||||||||| | | | |||||||||||||||  | |||||||||||||||||||||    
T  1614063 aaagtaaataacaaagaaataaagaaagaacttttattaagaaagacaattgtcacttattgaattccaagaacaaaagatgatt 1613979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 4316994 - 4317066
Alignment:
Q  32 taaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||| ||||    |||||||||||||||||| |||||||||  | |||| |||| ||||||||||||    
T  4316994 taaataacaagaaactaaa----aacttttattcaaagaaataattgtcacagaaaattcccaataacaaaagatga 4317066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 440
Target Start/End: Original strand, 4791543 - 4791623
Alignment:
Q  364 tgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg----ctccaacctttttcttgctcctgtgtaagagatat 440  Q
    |||||| ||||||||||||||||||||| ||| |||||||||     ||||||| ||||||||||||| | ||||| ||||    
T  4791543 tgaacctattcaacccaacaacaagtctcaagcgagtgtgtgtgtagtccaacccttttcttgctcctatataagacatat 4791623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 9194012 - 9194055
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  9194012 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 9194055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 461
Target Start/End: Complemental strand, 15348408 - 15348361
Alignment:
Q  414 tttttcttgctcctgtgtaagagatattatgagaaaacaggttctaac 461  Q
    |||||||||  |||||||||||||||||||||| ||| ||||||||||    
T  15348408 tttttcttgtgcctgtgtaagagatattatgaggaaataggttctaac 15348361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 21005553 - 21005596
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  21005553 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 21005596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 461
Target Start/End: Complemental strand, 4312734 - 4312504
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcattgttct-aagcgtaaac 338  Q
    |||||||| |||||||||| || | ||||||||||||| | ||||||||||    || |||||| |||||||||| ||||| ||  | | ||||||| ||    
T  4312734 aagcaaaaggcataaacat-agtagcataaacaagatt-atcatatgacaattcaattaaaacttatgtctcctcaaaggcttttatttcaagcgtacac 4312637  T
Q  339 taatcacaacttcaagcatttttcatgaacca-attcaacccaacaa-caagtcttaagtgagtgtgtgc------tccaacctttttcttgctcctgtg 430  Q
    |||||||||  |||||||||| |  | | |   |||||||||||||| ||||| | |||||||||||||       ||||||| |||||| ||||||||     
T  4312636 taatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtgtagtccaacccttttctagctcctgta 4312537  T
Q  431 taaga--gatattatgagaaaacaggttctaac 461  Q
    |||||  ||||||||||| ||||||||||||||    
T  4312536 taagatagatattatgaggaaacaggttctaac 4312504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 9264503 - 9264569
Alignment:
Q  149 actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| |||||||| || || |||| || | |||| ||||||||| ||||||||||||||||||||||    
T  9264503 acttgagccccaagaattaaatcactaaattgttgcacaagaaaccatgggctctaggtcagaaata 9264569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 231
Target Start/End: Complemental strand, 15523054 - 15522950
Alignment:
Q  131 tatttatagcctataacta-ctttagccccaataaatacatcaatagaatgttccacaag--aaatcatgggc-tctaggtcagaaatagactaaacagg 226  Q
    ||||||||||||| ||| | ||| | |||||| |||||||||||| ||||||||||||||  ||  ||||||| | ||||||| ||||| |||||| |||    
T  15523054 tatttatagcctaaaacaaacttaaaccccaagaaatacatcaattgaatgttccacaaggaaacccatgggcttttaggtcaaaaataaactaaaaagg 15522955  T
Q  227 cagct 231  Q
    |||||    
T  15522954 cagct 15522950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 4307927 - 4307883
Alignment:
Q  27 gaaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    ||||||||||||||| || |||| ||||||||||||||| |||||    
T  4307927 gaaagtaaataacaataacataatgatgaacttttattccaagaa 4307883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 4313297 - 4313253
Alignment:
Q  27 gaaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    ||||||||||||||| ||||||||| |||| |||||||| |||||    
T  4313297 gaaagtaaataacaataaaataaaggtgaaattttattccaagaa 4313253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 4465886 - 4465930
Alignment:
Q  163 aaatacatcaatagaatgttccacaagaaatcatgggctctaggt 207  Q
    |||||||||||||||||||||| | ||||| |||||||| |||||    
T  4465886 aaatacatcaatagaatgttcctcgagaaaccatgggctttaggt 4465930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 15173896 - 15173932
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttatt 64  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  15173896 aaagtaaataacaagaaagtaaaggtgaacttttatt 15173932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 19515509 - 19515545
Alignment:
Q  179 tgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||||||||||||||||||||| ||||||||    
T  19515509 tgttgcacaagaaatcatgggctctaggccagaaata 19515545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 146; Significance: 1e-76; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 31 - 247
Target Start/End: Original strand, 11869836 - 11870053
Alignment:
Q  31 gtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct 130  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||    
T  11869836 gtaaataacaagaaaataaagatgaacttttattaaaagaaacaattgtcacttattatttccaagaacaaaagatgattcaatatgcttgctagctact 11869935  T
Q  131 -tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcag 229  Q
     ||||||||| ||| |||||||| |||||||  ||||||||||||||||||||||||||||||  ||||||| ||||||||||||| |||||||||||||    
T  11869936 ctatttatagtctacaactacttaagccccaggaaatacatcaatagaatgttccacaagaaactatgggctttaggtcagaaataaactaaacaggcag 11870035  T
Q  230 cttgtttgggaagcaaaa 247  Q
    |||||  | |||||||||    
T  11870036 cttgtccgagaagcaaaa 11870053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 33 - 234
Target Start/End: Original strand, 8685849 - 8686051
Alignment:
Q  33 aaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-t 131  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||| || |    
T  8685849 aaataacaataaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgattcaatatgttttctagctactct 8685948  T
Q  132 atttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagct 231  Q
    |||||||| ||| |||||||| |||||||| ||||||||||||| |||||||||||||||| ||   ||| |||||||||| || |||||| ||| ||||    
T  8685949 atttatagtctacaactacttaagccccaagaaatacatcaataaaatgttccacaagaaaccacatgctttaggtcagaagtaaactaaataggtagct 8686048  T
Q  232 tgt 234  Q
    |||    
T  8686049 tgt 8686051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 243 - 461
Target Start/End: Original strand, 8686428 - 8686656
Alignment:
Q  243 caaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcattgttctaagcgtaaactaat 342  Q
    ||||| ||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||   ||| ||||||    
T  8686428 caaaaagcataaacaatagcagcataaacaagatttaacatatgacaacattattaaaactcatgtctcctccaaggttttgttctagtagtacactaat 8686527  T
Q  343 cacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg----------ctccaacctttttcttgctcctgtgta 432  Q
    || |||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||           |||| || ||||||||||||||||||    
T  8686528 cagaacttcaagcatttcttatgaacctattcaacccaacaacaagtcttaagtgagtgtgtgtgtgtgtgtagtccatcccttttcttgctcctgtgta 8686627  T
Q  433 agagatattatgagaaaacaggttctaac 461  Q
    |||||||||||||| ||||||||| ||||    
T  8686628 agagatattatgaggaaacaggttgtaac 8686656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 33 - 234
Target Start/End: Complemental strand, 8531979 - 8531775
Alignment:
Q  33 aaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataat--ttccaagaacaaaagatgattcaatatgtttgctagctgct 130  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||  ||| || || ||||||||| | |||||||||||||||| ||    
T  8531979 aaataacaagaaaataaagatgaacttttattcaaagaaacaaatgtcacttattatatttctaaaaataaaagatgaatgaatatgtttgctagctact 8531880  T
Q  131 -tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcag 229  Q
     ||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||| ||||||| ||||| || ||| ||| ||    
T  8531879 ctatttatagtctataactacttaagccccaagaaatacatcaatagaatgttccacaagaaagcatgggctttaggtcataaataaacaaaataggtag 8531780  T
Q  230 cttgt 234  Q
    |||||    
T  8531779 cttgt 8531775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 43 - 234
Target Start/End: Complemental strand, 16703872 - 16703677
Alignment:
Q  43 aaaataaag-atgaacttttattcaaag-aaacaattgtcacttat-aatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttata 138  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||||||||| ||||||||||||||| ||||||||    
T  16703872 aaaataaaggatgaacttttattcaaaggaaacaattgtcacttattaatttccaaaaacaagagatgattcaatttgtttgctagctgctctatttata 16703773  T
Q  139 gcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgt 234  Q
    | |||||||||||| |||||||| ||||||||||||||||| ||||||||||||  ||||||| ||||||| ||||| ||||| ||||||||||||    
T  16703772 gtctataactacttaagccccaagaaatacatcaatagaattttccacaagaaactatgggctttaggtcaaaaataaactaaccaggcagcttgt 16703677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 54 - 247
Target Start/End: Original strand, 41545776 - 41545970
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactactt 152  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||| ||| ||||||||    
T  41545776 gaacttttattcaaagaaacatttgtcacttataatttccaagaacaaaagatgattcaatatgtttgctaggtactctatttatagtctacaactactt 41545875  T
Q  153 tagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgtttgggaagcaaaa 247  Q
     |||||||| ||||||||||||| |||||||||||||||| ||    || ||||||||||||| |||||| |||||||||||  | |||||||||    
T  41545876 aagccccaagaaatacatcaataaaatgttccacaagaaaccacaaactttaggtcagaaataaactaaataggcagcttgtcggagaagcaaaa 41545970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 240 - 461
Target Start/End: Complemental strand, 16703325 - 16703097
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcattgttctaagcgtaaact 339  Q
    |||||||| | ||||||||||||| || |||||||||||||||||||| ||||  || ||||||||||||||||||||||  |||| |||| | || |||    
T  16703325 aagcaaaaggtataaacattagcagcaaaaacaagatttaacatatgataacacaataaaaactcatgtctcctccaaggttttgtcctaaccatacact 16703226  T
Q  340 aatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagt--------gtgtgctccaacctttttcttgctcctgtgt 431  Q
    ||||||||||||| |||||| | ||||||  ||||||||||||||||||||| ||||||||        ||||  |||| || |||||||||| ||||||    
T  16703225 aatcacaacttcacgcatttctaatgaacttattcaacccaacaacaagtctcaagtgagtgtgtctgtgtgtagtccagcccttttcttgcttctgtgt 16703126  T
Q  432 aagagatattatgagaaaacaggttctaac 461  Q
    |||||||||||||||  |||||||||||||    
T  16703125 aagagatattatgag-gaacaggttctaac 16703097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 17023322 - 17023247
Alignment:
Q  32 taaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatg 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  17023322 taaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatg 17023247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 13069848 - 13069781
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13069848 aaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgatt 13069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 40 - 221
Target Start/End: Original strand, 42244557 - 42244740
Alignment:
Q  40 aagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttata 138  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||  ||||||||||||||||   | ||  |||||||| || ||||||||    
T  42244557 aagaaaataaagatgaacttttattcaaataaacaattgtcacttattatttcagagaacaaaagatgatttgttgtggctgctagctactctatttata 42244656  T
Q  139 gcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    |  || ||  |||| || || || ||||| |||| ||||||||||||||||||| ||||||| | |||||||| |||| |||||    
T  42244657 gtttacaatgacttaagacctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcaggaataaactaa 42244740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 43842064 - 43842144
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||    
T  43842064 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaaaatga 43842144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 43 - 221
Target Start/End: Complemental strand, 11398968 - 11398788
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgc-ttatttatagcc 141  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||| |   | || | ||||||| | |||||||||| |    
T  11398968 aaaataaaggtgaacttttattcaaagaaacatttgtcccttattatttccaagaacaaaagatgaattgttgtgatagctagctactttatttatagtc 11398869  T
Q  142 tataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    |||| | |||| |  || ||  ||||||| | ||||||||||||||||||| || |||| | ||||||||||||| |||||    
T  11398868 tataccgacttaaaacctaaacaatacattactagaatgttccacaagaaaccaagggcttttaggtcagaaataaactaa 11398788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 11577794 - 11577882
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatat 116  Q
    |||||||| ||||| ||||||||| ||| ||||||||||| |||| ||||||||| || |||| |||||||||||||||||||||||||    
T  11577794 aaagtaaacaacaataaaataaaggtgatcttttattcaatgaaataattgtcacctagaattcccaagaacaaaagatgattcaatat 11577882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 19656101 - 19656180
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||    
T  19656101 aaagtaaatgacaagaaagtaaaggtgaacttttattcaaag-aacaattgtcacttattatttccgagaacaaaagatga 19656180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 6236938 - 6236871
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  6236938 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgatt 6236871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 14494828 - 14494893
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  14494828 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 14494893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 14976312 - 14976377
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  14976312 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 14976377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 2722012 - 2721944
Alignment:
Q  41 agaaaataaagat-gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  2722012 agaaaataaaggttgaacttttattcaaagaaacaattgtcacttattatttccaagaataaaagatga 2721944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 3339359 - 3339490
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtg 430  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||     
T  3339359 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgta 3339458  T
Q  431 taag--agatattatgagaaaacaggttctaac 461  Q
    ||||  ||||||||||||  |||||||||||||    
T  3339459 taagatagatattatgag-gaacaggttctaac 3339490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 14445898 - 14446027
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg----ctccaacctttttcttgctcctgtgta 432  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||||||||||||||     ||||||| ||||||| ||| ||| ||    
T  14445898 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgtagtccaacccttttcttactcttgtata 14445997  T
Q  433 ag--agatattatgagaaaacaggttctaac 461  Q
    ||  |||||||||||| ||||||||||||||    
T  14445998 agatagatattatgag-aaacaggttctaac 14446027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 34053625 - 34053680
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||| |||||||    
T  34053625 tgaactttgattcaaagaaacaattgtcacttattatttccaagaacagaagatga 34053680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 461
Target Start/End: Complemental strand, 17045872 - 17045644
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaa--cattatcaaaactcatgtctcctccaaggcattgttctaagcgtaaa 337  Q
    |||||||| ||||||| || || | ||||||||||||| ||||||||||||  || | | |||||| |||||||||| ||||| || ||  ||| ||| |    
T  17045872 aagcaaaaggcataaaaat-agtagcataaacaagatt-aacatatgacaattcaat-taaaaacttatgtctcctcaaaggctttatttcaagtgtaca 17045776  T
Q  338 ctaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtgt 431  Q
    ||||||||||||||||| |||  |  |||||| ||||||||||||||||| |   |||||||||||||       ||||||| ||||||||||| ||| |    
T  17045775 ctaatcacaacttcaagtattccttgtgaacctattcaacccaacaacaaattccaagtgagtgtgtgtgtgaagtccaacccttttcttgctcatgtat 17045676  T
Q  432 --aagagatattatgagaaaacaggttctaac 461  Q
      || |||||||||||| ||||||||||||||    
T  17045675 aaaatagatattatgaggaaacaggttctaac 17045644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 461
Target Start/End: Complemental strand, 17048032 - 17047804
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaa--cattatcaaaactcatgtctcctccaaggcattgttctaagcgtaaa 337  Q
    |||||||| ||||||| || || | ||||||||||||| ||||||||||||  || | | |||||| |||||||||| ||||| || ||  ||| ||| |    
T  17048032 aagcaaaaggcataaaaat-agtagcataaacaagatt-aacatatgacaattcaat-taaaaacttatgtctcctcaaaggctttatttcaagtgtaca 17047936  T
Q  338 ctaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtgt 431  Q
    ||||||||||||||||| |||  |  |||||| ||||||||||||||||| |   |||||||||||||       ||||||| ||||||||||| ||| |    
T  17047935 ctaatcacaacttcaagtattccttgtgaacctattcaacccaacaacaaattccaagtgagtgtgtgtgtgaagtccaacccttttcttgctcatgtat 17047836  T
Q  432 --aagagatattatgagaaaacaggttctaac 461  Q
      || |||||||||||| ||||||||||||||    
T  17047835 aaaatagatattatgaggaaacaggttctaac 17047804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 240 - 405
Target Start/End: Original strand, 20225792 - 20225956
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaa-ctcatgtctcctccaaggcattgttctaagcgtaaac 338  Q
    ||||||||  ||||||||| |||| |||||| |||||| |||||||||||| |  || |||| || |||||||||| ||||| || ||  ||| ||| ||    
T  20225792 aagcaaaagacataaacat-agcagcataaataagatt-aacatatgacaaaacaattaaaaacttatgtctcctcaaaggctttatttcaagtgtacac 20225889  T
Q  339 taatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    ||||||||||||||||||||  |  |||||| |||||||||| |||||||| | |||| ||||||||    
T  20225890 taatcacaacttcaagcattccttgtgaacctattcaacccagcaacaagtttcaagtaagtgtgtg 20225956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 460
Target Start/End: Complemental strand, 13601141 - 13601010
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtg 430  Q
    ||||||||||||||||||||||  |  |||||| ||||||||||||||||||| | |||||||||||||       ||||||| ||||||||||||| |     
T  13601141 actaatcacaacttcaagcattccttgtgaacctattcaacccaacaacaagtttcaagtgagtgtgtgtgtgaagtccaaccattttcttgctcctata 13601042  T
Q  431 taag--agatattatgagaaaacaggttctaa 460  Q
    ||||  |||||||||| | ||||| |||||||    
T  13601041 taagatagatattatgcggaaacatgttctaa 13601010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 14660795 - 14660860
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| | || ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  14660795 aaaataaaggtaaaattttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 14660860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 12776667 - 12776784
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtg 430  Q
    |||||||||||||||||| |||  |  |||||  ||||||||||||||||||||| |||||||||||||       ||||||| |||||||||||||||     
T  12776667 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtctcaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgta 12776766  T
Q  431 taag--agatattatgag 446  Q
    ||||  ||||||||||||    
T  12776767 taagatagatattatgag 12776784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 461
Target Start/End: Original strand, 13195593 - 13195726
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg--------ctccaacctttttcttgctcctg 428  Q
    |||||||||||||||||| |||  |   ||||  ||||||||||||| |||||||||||||||||||||         ||||||||||||||||||||||    
T  13195593 actaatcacaacttcaagtattccttgagaacttattcaacccaacatcaagtcttaagtgagtgtgtgtgtgtgtagtccaacctttttcttgctcctg 13195692  T
Q  429 tgtaag--agatattatgagaaaacaggttctaac 461  Q
    | ||||  ||||||||||||  |||||||||||||    
T  13195693 tataagatagatattatgag-gaacaggttctaac 13195726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 57 - 247
Target Start/End: Complemental strand, 17041796 - 17041605
Alignment:
Q  57 cttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactactttag 155  Q
    |||||||| ||  ||||||||||||||||| ||||| ||||||||||||||| |     || | ||||||| || |||||||||  || ||  |||| ||    
T  17041796 cttttattaaagaaaacaattgtcacttattatttcgaagaacaaaagatgaattgtagtgatagctagctactctatttatagtttacaatgacttaag 17041697  T
Q  156 ccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaacaggcagcttgtttgggaagcaaaa 247  Q
    ||| || ||||| |  | ||||||||||||||||||| || |||| | ||||||||||||| ||| || ||| |||||||| |||||||||||    
T  17041696 ccctaagaaatataagagtagaatgttccacaagaaaccacgggcttttaggtcagaaataaact-aataggtagcttgttcgggaagcaaaa 17041605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 460
Target Start/End: Complemental strand, 22637738 - 22637644
Alignment:
Q  371 attcaacccaacaa-caagtcttaagtgagtgtgtgc--tccaacctttttcttgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    |||||||||||||| ||||| | |||||||||||||   ||||||||||||||| ||||||| ||||  |||||||||||| |||| ||||||||    
T  22637738 attcaacccaacaatcaagtttcaagtgagtgtgtgtagtccaacctttttcttactcctgtataagatagatattatgaggaaaccggttctaa 22637644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 460
Target Start/End: Complemental strand, 4382789 - 4382692
Alignment:
Q  372 ttcaacccaacaa-caagtcttaagtgagtgtgtgc------tccaacctttttcttgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||||||||| |||||||||||||||||||||       ||||||| ||||||||||||||| ||||  |||||||||||| ||||| |||||||    
T  4382789 ttcaacccaacaatcaagtcttaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgtataagatagatattatgaggaaacatgttctaa 4382692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 7908609 - 7908418
Alignment:
Q  33 aaataacaagaaaataaa-gatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct- 130  Q
    ||||||||||||| |||| ||  |||||||||| | | | ||||||||||||  | | |||||||||||||||||||||   |||| | ||||||| ||     
T  7908609 aaataacaagaaagtaaatgaaaaacttttattaagaaagacaattgtcactattgaattccaagaacaaaagatgatttgttatgatagctagctactc 7908510  T
Q  131 tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    |||||||||  || ||  |||| ||||| || ||||| | || ||||||||||||||||||| || || | | ||||||||||||| |||||    
T  7908509 tatttatagtttacaatgacttaagccctaagaaatataacactagaatgttccacaagaaaccacggacttttaggtcagaaataaactaa 7908418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 14659269 - 14659198
Alignment:
Q  164 aatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaacaggcagcttgt 234  Q
    ||||||||| ||||||||||||||||||| || |||| | ||||||||||||| |||||| ||| |||||||    
T  14659269 aatacatcactagaatgttccacaagaaaccacgggcttttaggtcagaaataaactaaataggtagcttgt 14659198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 215
Target Start/End: Complemental strand, 25055067 - 25054940
Alignment:
Q  90 ttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaa 188  Q
    ||||||||||||||||||| |   |||| | |||| || || ||||||||| ||||||| |||| |  || ||  ||||||||| |||||||||||||||    
T  25055067 ttccaagaacaaaagatgaattgttatgatagctaactactctatttatagtctataacgacttaaaacctaaacaatacatcactagaatgttccacaa 25054968  T
Q  189 gaaatcatgggc-tctaggtcagaaata 215  Q
    |||| || |||| |||||||||||||||    
T  25054967 gaaaccaagggcttctaggtcagaaata 25054940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 25765841 - 25765884
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||||||||||||||||| |||||    
T  25765841 aaagtaaataacaataaaataaagatgaacttttattccaagaa 25765884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 20561089 - 20560956
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtga--------gtgtgtgctccaacctttttcttgctcctg 428  Q
    |||||||||||||||||| ||| ||  | |||  ||||||||||||||||| ||||||||||        ||||||  ||||||| ||||||||||||||    
T  20561089 actaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgtgtgtagtccaacccttttcttgctcctg 20560990  T
Q  429 tgtaag--agatattatgagaaaacaggttctaac 461  Q
    | ||||  ||||||||||||  |||||||||||||    
T  20560989 tataagatagatattatgag-gaacaggttctaac 20560956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 20563397 - 20563264
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtga--------gtgtgtgctccaacctttttcttgctcctg 428  Q
    |||||||||||||||||| ||| ||  | |||  ||||||||||||||||| ||||||||||        ||||||  ||||||| ||||||||||||||    
T  20563397 actaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgtgtgtagtccaacccttttcttgctcctg 20563298  T
Q  429 tgtaag--agatattatgagaaaacaggttctaac 461  Q
    | ||||  ||||||||||||  |||||||||||||    
T  20563297 tataagatagatattatgag-gaacaggttctaac 20563264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 20565705 - 20565572
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtga--------gtgtgtgctccaacctttttcttgctcctg 428  Q
    |||||||||||||||||| ||| ||  | |||  ||||||||||||||||| ||||||||||        ||||||  ||||||| ||||||||||||||    
T  20565705 actaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgtgtgtagtccaacccttttcttgctcctg 20565606  T
Q  429 tgtaag--agatattatgagaaaacaggttctaac 461  Q
    | ||||  ||||||||||||  |||||||||||||    
T  20565605 tataagatagatattatgag-gaacaggttctaac 20565572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 84
Target Start/End: Complemental strand, 13605114 - 13605073
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcactt 84  Q
    ||||||||| |||| |||||||||||||||||||||||||||    
T  13605114 aaaataaaggtgaaattttattcaaagaaacaattgtcactt 13605073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 1992799 - 1992744
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaaga--gatattatgagaaaacaggttctaa 460  Q
    ||||||| ||||||||||||||| |||||  ||||||||||| |||||||||||||    
T  1992799 tccaaccattttcttgctcctgtataagatagatattatgaggaaacaggttctaa 1992744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 11398211 - 11398156
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaaga--gatattatgagaaaacaggttctaa 460  Q
    ||||||| ||||||||||||||| |||||  ||||||||||| |||||||||||||    
T  11398211 tccaacccttttcttgctcctgtataagatagatattatgaggaaacaggttctaa 11398156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 460
Target Start/End: Complemental strand, 17387875 - 17387781
Alignment:
Q  371 attcaacccaacaa-caagtcttaagtgagtgtgtgc--tccaacctttttcttgctcctgtgtaaga--gatattatgagaaaacaggttctaa 460  Q
    |||||||||||||| ||||| | |||||||||||||   ||||||| |||||||||| |||| |||||  ||||||||||| |||| ||||||||    
T  17387875 attcaacccaacaatcaagtttaaagtgagtgtgtgtagtccaacccttttcttgctactgtataagatagatattatgaggaaaccggttctaa 17387781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 17050806 - 17050755
Alignment:
Q  57 cttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||| ||  ||||||||| ||||||| |||||||||||||||||||||    
T  17050806 cttttattaaagaaaacaattgccacttattatttccaagaacaaaagatga 17050755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 25055102 - 25055059
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  25055102 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 25055059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 36076261 - 36076224
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattc 65  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  36076261 aaagtaaataacaataaaataaaggtgaacttttattc 36076224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 460
Target Start/End: Complemental strand, 15024724 - 15024669
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||| ||||||||||||||| ||||  |||||||||||| ||||| |||||||    
T  15024724 tccaaccattttcttgctcctgtataagatagatattatgaggaaacatgttctaa 15024669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 20225409 - 20225445
Alignment:
Q  179 tgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  20225409 tgttgcacaagaaaccatgggctctaggtcagaaata 20225445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 43496288 - 43496252
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttatt 64  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  43496288 aaagtaaataacaagaaagtaaaggtgaacttttatt 43496252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1559 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 25 - 234
Target Start/End: Complemental strand, 1496 - 1286
Alignment:
Q  25 atgaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgcta 124  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  1496 atgaaagtaaataacaagaaaatagagatgaacttttattcaaagaaacagttgtcacttattatttccaagaacaaaagatgattcaatatatttgcta 1397  T
Q  125 gctgc-ttatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaac 223  Q
    ||||| ||||||||| ||||||||||||| ||||   | ||||| |||||||||||||||||||||||||  |||||| ||||||| ||||| ||||| |    
T  1396 gctgctttatttataacctataactacttaagccttgagaaatatatcaatagaatgttccacaagaaattgtgggctttaggtcaaaaataaactaacc 1297  T
Q  224 aggcagcttgt 234  Q
    |  ||||||||    
T  1296 aaacagcttgt 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 117; Significance: 2e-59; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 25 - 247
Target Start/End: Complemental strand, 24166353 - 24166129
Alignment:
Q  25 atgaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgcta 124  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    |||||||| |||    
T  24166353 atgaaagtaaataacaagcaaataaagatgaacttttattcaaagaaacaattgtcacttatcatttccaagaacaaaagatgaaaatatatgtttccta 24166254  T
Q  125 gctgct-tatttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaa 222  Q
    |||||| |||||||||| || |||| |||| |||||||| |||||||||||||||||||| ||||||||| | | |||| || |||| ||||| ||||||    
T  24166253 gctgctctatttatagcataaaactaacttaagccccaagaaatacatcaatagaatgttgcacaagaaaccgtaggctttatgtcaaaaataaactaaa 24166154  T
Q  223 caggcagcttgtttgggaagcaaaa 247  Q
     |||||||||| |  ||||||||||    
T  24166153 aaggcagcttgatcaggaagcaaaa 24166129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 29 - 192
Target Start/End: Original strand, 23029577 - 23029742
Alignment:
Q  29 aagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctg 128  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||| |  |||||| |||||||||    
T  23029577 aagtaaataacaagaaaataaagaagaacttttattcaaagaaacaatcttcacttataatttccaagaacaaaagatgaatagatatgtctgctagctg 23029676  T
Q  129 ct-tatttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaa 192  Q
    || ||||||||||||| |||| || | |||||||| ||||||||||||||||||||||||||||||    
T  23029677 ctctatttatagcctaaaactaacataagccccaagaaatacatcaatagaatgttccacaagaaa 23029742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 48 - 234
Target Start/End: Complemental strand, 22170857 - 22170669
Alignment:
Q  48 aaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgctt-atttatagcctataa 146  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||  | |||||||||||| | |||||| ||||||||||||| |||||||| ||| ||    
T  22170857 aaagaagaacttttattcaaagaaacaattgtcactattaatttcagataacaaaagatgaatgaatatgattgctagctgctttatttatagtctacaa 22170758  T
Q  147 ctactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatag-actaaacaggcagcttgt 234  Q
    |||||| |||| ||| |||||||| ||||||||||| |||||||||  ||||||| |||||||||||||| | ||||||||||||||||    
T  22170757 ctacttaagcctcaagaaatacattaatagaatgtttcacaagaaactatgggctttaggtcagaaatagaattaaacaggcagcttgt 22170669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 310 - 461
Target Start/End: Complemental strand, 17412675 - 17412521
Alignment:
Q  310 tcctccaaggcattgttctaagcgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgc--- 406  Q
    ||||||||||| ||||| | ||| || |||||||||||| ||||||  || ||||||||| ||||||||||||||||  | | |||||||||||||        
T  17412675 tcctccaaggctttgttttcagcatacactaatcacaacctcaagcgcttctcatgaacctattcaacccaacaacatatttcaagtgagtgtgtgtgta 17412576  T
Q  407 -tccaacctttttcttgctcctgtgtaagagatattatgagaaaacaggttctaac 461  Q
     |||| | |||||||||| |||||||||||||||||||||| ||||||||||||||    
T  17412575 gtccagc-tttttcttgcgcctgtgtaagagatattatgaggaaacaggttctaac 17412521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 24214835 - 24214757
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagat 106  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  24214835 aaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagat 24214757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 24220458 - 24220380
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagat 106  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  24220458 aaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagat 24220380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 22942435 - 22942370
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  22942435 aaaataaaggtgaaattttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 22942370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 48 - 222
Target Start/End: Complemental strand, 16677152 - 16676976
Alignment:
Q  48 aaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataa 146  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||  |||| |||||||||||  | | | ||| | |||||| |||||||||||||  |    
T  16677152 aaagaagaacttttattcaaagaaacaattgtcactattaatttcagagaagaaaagatgattatacaagcttgatggctgctctatttatagcctaaca 16677053  T
Q  147 ct-actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaa 222  Q
     | |||| ||||| || ||||| |||| |  | |||| |||||||||||||||||| ||||||||||||| ||||||    
T  16677052 ttgacttaagccctaagaaataaatcactgaagtgttgcacaagaaatcatgggctttaggtcagaaataaactaaa 16676976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 221
Target Start/End: Complemental strand, 12410591 - 12410424
Alignment:
Q  55 aacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactacttt 153  Q
    |||||||||| ||  |||||||||||| |  | | ||||||||||||||||||| |   |||| ||||||||| || |||||||||  || ||  ||||     
T  12410591 aacttttattaaagaaaacaattgtcattattgaattccaagaacaaaagatgaattgttatgattgctagctactctatttatagtttacaatgactta 12410492  T
Q  154 agccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaa 221  Q
    ||||| || ||||| |||| ||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  12410491 agccctaagaaataaatcactagaatgttccacaagaaaccatgggctttaggtcagaaataaactaa 12410424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 15059452 - 15059387
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  15059452 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 15059387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 20915972 - 20916027
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  20915972 tgaacttttattcaaagaaataattgtcacttattatttccaagaacaaaagatga 20916027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 24165328 - 24165262
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgat 109  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||   |||||||||||||||    
T  24165328 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttaagagaacaaaagatgat 24165262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 20169471 - 20169536
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| || |||||||||||||||||||||||||||||||  ||||||| ||||||||||||    
T  20169471 aaaataaaggtggacttttattcaaagaaacaattgtcacttattctttccaataacaaaagatga 20169536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 20967826 - 20967761
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||| ||||||||||||| |||||  ||||||||||||||    
T  20967826 aaaataaagttgaacttttattcaaagaaaaaattgtcacttattatttcagagaacaaaagatga 20967761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 23343555 - 23343620
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||  |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  23343555 aaaataaaagtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 23343620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 92
Target Start/End: Original strand, 31057716 - 31057780
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttc 92  Q
    ||||||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||| |||||    
T  31057716 aaagtaaataataagaaagtaaaggtgaacttttattcaaagaaaaaattgtcacttattatttc 31057780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 18484345 - 18484460
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgc----tccaacctttttcttgctcctgtgta 432  Q
    ||||||||||||||||||  ||  |  |||||  |||||||||||||||||||||||||||||||||||     ||||||| ||||||||||||||| ||    
T  18484345 actaatcacaacttcaagtgttccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgtagtccaacccttttcttgctcctgtata 18484444  T
Q  433 ag--agatattatgag 446  Q
    ||  ||||||||||||    
T  18484445 agatagatattatgag 18484460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 446
Target Start/End: Original strand, 22317681 - 22317764
Alignment:
Q  371 attcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtgtaag--agatattatgag 446  Q
    |||||||||||||||||||||||||||||||||||       ||||||| ||||||||||||||| ||||  ||||||||||||    
T  22317681 attcaacccaacaacaagtcttaagtgagtgtgtgtgtgtagtccaaccattttcttgctcctgtataagatagatattatgag 22317764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 22855644 - 22855576
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  | |||  |||||||||||||||||||||||||||||||||||    
T  22855644 actaatcacaacttcaagtattccttgtaaacttattcaacccaacaacaagtcttaagtgagtgtgtg 22855576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 435
Target Start/End: Original strand, 20916625 - 20916691
Alignment:
Q  371 attcaacccaacaa-caagtcttaagtgagtgtgtgc-tccaacctttttcttgctcctgtgtaaga 435  Q
    |||||||||||||| ||||| | |||||||||||||| ||||||| ||||||||||||||| |||||    
T  20916625 attcaacccaacaatcaagtttcaagtgagtgtgtgcgtccaacccttttcttgctcctgtataaga 20916691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 405
Target Start/End: Complemental strand, 26847690 - 26847656
Alignment:
Q  371 attcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||||||||||||||||||||    
T  26847690 attcaacccaacaacaagtcttaagtgagtgtgtg 26847656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 27270111 - 27270061
Alignment:
Q  413 ctttttcttgctcctgtgtaagagatattatga-gaaaacaggttctaact 462  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  27270111 ctttttattgcacctgtgtaagagatattatgaggaaaacaggttctaact 27270061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 27270256 - 27270206
Alignment:
Q  413 ctttttcttgctcctgtgtaagagatattatga-gaaaacaggttctaact 462  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  27270256 ctttttattgcacctgtgtaagagatattatgaggaaaacaggttctaact 27270206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Complemental strand, 27270401 - 27270351
Alignment:
Q  413 ctttttcttgctcctgtgtaagagatattatga-gaaaacaggttctaact 462  Q
    |||||| |||| ||||||||||||||||||||| |||||||||||||||||    
T  27270401 ctttttattgcgcctgtgtaagagatattatgaggaaaacaggttctaact 27270351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 23114354 - 23114276
Alignment:
Q  25 atgaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||     || ||||||||||| |  |||||||||||||| || ||||  ||||||||||||||||    
T  23114354 atgaaagtaaataacaagaaa-----gaagaacttttattaatggaaacaattgtcacataaaattctcaagaacaaaagatga 23114276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 460
Target Start/End: Original strand, 23600763 - 23600904
Alignment:
Q  329 aagcgtaaactaatcacaacttcaagcatttttcatgaacca-attcaacccaacaa-caagtcttaagtgagtgtgtgc------tccaacctttttct 420  Q
    ||||||| |||||||||||  |||||||||| |  | ||||  |||||||||||||| ||||| | |||||||||||||       ||||||| ||||||    
T  23600763 aagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtgtagtccaacccttttct 23600862  T
Q  421 tgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||||| ||||  |||||||||||| ||||| |||||||    
T  23600863 tgctcctgtataagatagatattatgaggaaacatgttctaa 23600904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 329 - 460
Target Start/End: Complemental strand, 24219834 - 24219693
Alignment:
Q  329 aagcgtaaactaatcacaacttcaagcatttttcatgaacca-attcaacccaacaa-caagtcttaagtgagtgtgtgc------tccaacctttttct 420  Q
    ||||||| |||||||||||  |||||||||| |  | ||||  |||||||||||||| ||||| | |||||||||||||       ||||||| ||||||    
T  24219834 aagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtgtagtccaacccttttct 24219735  T
Q  421 tgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||||| ||||  |||||||||||| ||||| |||||||    
T  24219734 tgctcctgtataagatagatattatgaggaaacatgttctaa 24219693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 2953655 - 2953721
Alignment:
Q  149 actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||||||||| || |||| || | |||| |||||||||  |||||||||||||||||||||    
T  2953655 acttgagccccaataattaaatcattaaagtgttgcacaagaaacgatgggctctaggtcagaaata 2953721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 33 - 110
Target Start/End: Complemental strand, 20738439 - 20738361
Alignment:
Q  33 aaataacaagaaaataaag-atgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||||||||||||| | ||||||||||| | | | ||||||| ||||  | | |||||||||||||||||||||    
T  20738439 aaataacaagaaaataaaggaagaacttttattaagaaagacaattgccactattgaattccaagaacaaaagatgatt 20738361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 25116306 - 25116368
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgag 399  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||| ||||    
T  25116306 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaaatgag 25116368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 337 - 399
Target Start/End: Original strand, 25175397 - 25175459
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgag 399  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||| ||||    
T  25175397 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaaatgag 25175459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 31758117 - 31758199
Alignment:
Q  28 aaagtaaataacaagaaaataaag-atgaac-ttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||||| | |||| ||||||| | | | ||||||||||||  | | |||||||||||||||||||    
T  31758117 aaagtaaataacaagaaaataaagaaagaactttttattaagaaagacaattgtcactattgaattccaagaacaaaagatga 31758199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 201
Target Start/End: Original strand, 34223259 - 34223296
Alignment:
Q  164 aatacatcaatagaatgttccacaagaaatcatgggct 201  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  34223259 aatacatcactagaatgttccacaagaaaccatgggct 34223296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 3e-58; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 54 - 234
Target Start/End: Original strand, 5513663 - 5513845
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttat-aatttccaagaacaaaagatgattcaatatgtttgctagctgctt-atttatagcctataactact 151  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||| |||||||||| |||||||| ||| |||||||    
T  5513663 gaacttttattcaaagaaacaattgtcacttattaatttacaagaacaaaagatgattgaatatgttttctagctgctttatttatagtctaaaactact 5513762  T
Q  152 ttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgt 234  Q
    | |||||||| || |||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||| ||||||||    
T  5513763 taagccccaagaattacatcaatagaatgttccataagaaaccatgggctttaggtcagaaataaactaaacagacagcttgt 5513845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 240 - 405
Target Start/End: Original strand, 9488916 - 9489081
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcattgttctaagcgtaaact 339  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||   ||| |||    
T  9488916 aagcaaaaggcatgaacattagcagcataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccagggctttgttctagtggtacact 9489015  T
Q  340 aatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    || |||||||||||| |||| ||||||||| ||||||||||||||||||||| |||||||||||||    
T  9489016 aaacacaacttcaagtatttctcatgaacctattcaacccaacaacaagtctcaagtgagtgtgtg 9489081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 9487039 - 9487247
Alignment:
Q  27 gaaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagc 126  Q
    ||||||||||||||| ||||||||| |||  |||| |||||||||| |||||||||||| ||||  |||||||||||||||| | ||||||||||||| |    
T  9487039 gaaagtaaataacaataaaataaaggtgatatttttttcaaagaaataattgtcacttagaattctcaagaacaaaagatgaatgaatatgtttgctacc 9487138  T
Q  127 tgct-tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacag 225  Q
    |||| ||||||||| ||| |||||||| |||||||| ||||||||||||||| ||||||||||||||  | ||||| ||||| |||||||||||||| ||    
T  9487139 tgctctatttatagtctacaactacttaagccccaagaaatacatcaatagagtgttccacaagaaactacgggctttaggttagaaatagactaaatag 9487238  T
Q  226 gcagcttgt 234  Q
    |||||||||    
T  9487239 gcagcttgt 9487247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 54 - 234
Target Start/End: Original strand, 33331022 - 33331203
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactactt 152  Q
    ||||||||||||||||||| |||||||||||||||||||  ||||||| ||||||||  ||||||||||||||| || |||||||||  || ||||||||    
T  33331022 gaacttttattcaaagaaataattgtcacttataatttcagagaacaatagatgatttgatatgtttgctagctactctatttatagtttacaactactt 33331121  T
Q  153 tagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgt 234  Q
     |||||||| |||||||||| |||||||||||||||||||  ||||||| ||||||| ||||| |||||| |||||||||||    
T  33331122 aagccccaagaaatacatcagtagaatgttccacaagaaactatgggctttaggtcataaataaactaaataggcagcttgt 33331203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 48 - 201
Target Start/End: Original strand, 23793614 - 23793768
Alignment:
Q  48 aaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataa 146  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    ||||||||| |||||||| ||||||||||||| ||    
T  23793614 aaagatgaacttttattcaaagaaacaattg-cacttataatttccaagaacaaaagatgagaatatatgtttgttagctgctctatttatagcctaaaa 23793712  T
Q  147 cta-ctttagccccaataaatacatcaatagaatgttccacaagaaatcatgggct 201  Q
    ||| ||| |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  23793713 ctaacttaagccccaagaaatacatcaatagaatgttccacaagaaaccatgggct 23793768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 54 - 201
Target Start/End: Complemental strand, 5675521 - 5675373
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactactt 152  Q
    |||| |||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||| || ||||||||| ||| ||||||||    
T  5675521 gaacatttattcaaagaaacagttgtcacttataatttcagagaacaaaagatgattcaatatgtttgctagcttctctatttatagtctacaactactt 5675422  T
Q  153 tagccccaataaatacatcaatagaatgttccacaagaaatcatgggct 201  Q
     | |||||| ||||||||||||||||||||||||||||||  |||||||    
T  5675421 aaaccccaagaaatacatcaatagaatgttccacaagaaactatgggct 5675373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 405
Target Start/End: Complemental strand, 12515201 - 12515046
Alignment:
Q  251 ataaacattagcaacataaacaagatttaacatatgacaacattatc-aaaactcatgtctcctccaaggcattgttctaagcgtaaactaatcacaact 349  Q
    |||||||||| |||||| ||||| || ||||| |||||||||| ||  ||||||  ||||||||||||||| ||||| | |||||| |||| ||||||||    
T  12515201 ataaacattaacaacattaacaacatctaacacatgacaacataatttaaaacttttgtctcctccaaggctttgttttcagcgtacactagtcacaact 12515102  T
Q  350 tcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    ||||| |||| ||||||||| ||||||||||||||||||| | |||||||||||||    
T  12515101 tcaagtatttctcatgaacctattcaacccaacaacaagtttcaagtgagtgtgtg 12515046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 33 - 222
Target Start/End: Original strand, 11922451 - 11922642
Alignment:
Q  33 aaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-t 131  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||| || | |  | | ||||| | ||| || |    
T  11922451 aaataacaagaaaataaagaagaacttttattaaaagaaacaattgtcacttattatttccaagaacaaaatattaatatacaagtttgatggctactct 11922550  T
Q  132 atttatagcct-ataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaa 222  Q
    ||||||||||| | ||  |||| ||||| || ||||| |||| || | |||| ||||||||| || ||||| ||||||||||||| ||||||    
T  11922551 atttatagcctaacaatgacttaagccctaagaaatagatcactaaagtgttgcacaagaaaccaagggctttaggtcagaaataaactaaa 11922642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 43 - 215
Target Start/End: Complemental strand, 31593971 - 31593797
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcc 141  Q
    ||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |   |||| | ||||| | || ||||||||| |    
T  31593971 aaaataaaagtgaacttttattcaaagaaacaattgtcacttattatttcaaagaacaaaagatgaattgttatgatagctagttactctatttatagtc 31593872  T
Q  142 tataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaata 215  Q
    |||||| |||| |  || ||  ||||||||| ||||||||||||||||||| || |||| | |||||||||||||    
T  31593871 tataacgacttaaaacctaagcaatacatcactagaatgttccacaagaaaccaagggcttttaggtcagaaata 31593797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 38652232 - 38652154
Alignment:
Q  32 taaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  38652232 taaataacaaggaaataaggatgaacttttattcaaagaaacaattgtcacttattatttccaataacaaaagatgatt 38652154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 6518459 - 6518379
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  6518459 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 6518379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 17168933 - 17168863
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaa 98  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||| ||||||||||||    
T  17168933 aaagtaaataacaagaaaatagagaagaacttttattcaaagaaataattgtcacttagaatttccaagaa 17168863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 17174505 - 17174435
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaa 98  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||| ||||||||||||    
T  17174505 aaagtaaataacaagaaaatagagaagaacttttattcaaagaaataattgtcacttagaatttccaagaa 17174435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 21102228 - 21102308
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||||   ||||||||||||||    
T  21102228 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaataattgtcacttattatttaagagaacaaaagatga 21102308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 24125233 - 24125297
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  24125233 aaaataaagatgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatg 24125297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 11888993 - 11889048
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  11888993 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 11889048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 20059168 - 20059235
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  20059168 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgatt 20059235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 11902628 - 11902738
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcc 141  Q
    ||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |   |||| | ||||||| || ||||||||| |    
T  11902628 aaaataaatgtgaacttttatttaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtc 11902727  T
Q  142 tataactactt 152  Q
    |||||| ||||    
T  11902728 tataacgactt 11902738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 3355335 - 3355270
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||   ||||||||||||||    
T  3355335 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattattttatagaacaaaagatga 3355270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 12345960 - 12346156
Alignment:
Q  43 aaaataaagatgaacttttattcaaag--aaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatag 139  Q
    |||||||||||||||||||||||||||  ||||||||||||||  ||| |||||||||||| ||||||    ||| ||||| | |||||| |||||||||    
T  12345960 aaaataaagatgaacttttattcaaaggaaaacaattgtcactattaaattccaagaacaagagatgaaaatataagtttgatggctgctctatttatag 12346059  T
Q  140 cc-tataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagac-taaacaggcagcttgt 234  Q
    ||  |||   | || ||||| || ||||| || | || | |||| ||||||||| |||||||| ||||||||||||| || ||||||| ||||||||    
T  12346060 ccaaatattgatttaagccctaagaaataaattactacagtgttacacaagaaaccatgggctttaggtcagaaataaacttaaacagacagcttgt 12346156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 16951974 - 16951909
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  16951974 aaaataaaggtgaactgttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 16951909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 21275310 - 21275245
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||  ||||||||||||||    
T  21275310 aaaataaaggtgaacttttattcaaagaaacaattgtcccttattatttcagagaacaaaagatga 21275245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 43701578 - 43701643
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  | ||||||||||||    
T  43701578 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagataacaaaagatga 43701643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 337 - 461
Target Start/End: Complemental strand, 15865570 - 15865439
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtga------gtgtgtgctccaacctttttcttgctcctgtg 430  Q
    |||||||||||||||||| |||  |  |||||  ||||||||||||||||||||||||||||      ||||||  ||||||| |||||||||||||||     
T  15865570 actaatcacaacttcaagtattccttgtgaactcattcaacccaacaacaagtcttaagtgaatgtgtgtgtgtagtccaacccttttcttgctcctgta 15865471  T
Q  431 taag--agatattatgagaaaacaggttctaac 461  Q
    ||||  ||||||||||| | |||||||||||||    
T  15865470 taagatagatattatga-agaacaggttctaac 15865439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 18287070 - 18287005
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||  |||||||||||||||||||| ||||||||||||| |||||  ||||||||||||||    
T  18287070 aaaataaaagtgaacttttattcaaagaaagaattgtcacttattatttcagagaacaaaagatga 18287005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 14654131 - 14654199
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||||||||||||||    
T  14654131 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtg 14654199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 329 - 461
Target Start/End: Original strand, 17485037 - 17485177
Alignment:
Q  329 aagcgtaaactaatcacaacttcaagcatttttcatgaacca-attcaacccaacaa-caagtcttaagtgagtgtgtgc----tccaacctttttcttg 422  Q
    ||||||| |||||||||||  |||||||||| | || | ||  |||||||||||||| ||||| | |||||||||||||     ||||||| ||||||||    
T  17485037 aagcgtacactaatcacaaactcaagcatttcttataatccttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtagtccaacccttttcttg 17485136  T
Q  423 ctcctgtgtaaga--gatattatgagaaaacaggttctaac 461  Q
    ||||||| |||||  ||||||||||| ||||||||||||||    
T  17485137 ctcctgtataagatagatattatgaggaaacaggttctaac 17485177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 100
Target Start/End: Original strand, 3772202 - 3772249
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaaca 100  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||    
T  3772202 tgaacttttattcaaagaagcaattgtcacttattatttccaagaaca 3772249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 15409452 - 15409384
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    ||||||||| |||||||| |||  |  |||||||||||||||||||||||||| | |||||||||||||    
T  15409452 actaatcacgacttcaagtattcgttgtgaaccaattcaacccaacaacaagtttcaagtgagtgtgtg 15409384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 329 - 460
Target Start/End: Complemental strand, 10630839 - 10630700
Alignment:
Q  329 aagcgtaaactaatcacaacttcaagcatttttcatgaacca-attcaacccaacaa-caagtcttaagtgagtgtgtgc----tccaacctttttcttg 422  Q
    ||||||| |||||||||||  |||||||||| |  | ||||  |||||||||||||| ||||| | |||||||||||||     ||||||| ||||||||    
T  10630839 aagcgtacactaatcacaaactcaagcatttcttgtaaaccttattcaacccaacaatcaagtttcaagtgagtgtgtgtgtagtccaacccttttcttg 10630740  T
Q  423 ctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||| ||||  |||||||||||| ||||| |||||||    
T  10630739 ctcctgtataagatagatattatgaggaaacatgttctaa 10630700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 461
Target Start/End: Complemental strand, 10650475 - 10650337
Alignment:
Q  332 cgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtga--------gtgtgtgctccaacctttttcttgc 423  Q
    |||| |||||||||||||||||| ||| ||  | |||  ||||||||||||||||| ||||||||||        ||||||  ||||||| |||||||||    
T  10650475 cgtacactaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaaatcttaagtgagtgtatgtgtgtgtagtccaacccttttcttgc 10650376  T
Q  424 tcctgtgtaag--agatattatgagaaaacaggttctaac 461  Q
    |||||| ||||  ||||||||||||  |||||||||||||    
T  10650375 tcctgtataagatagatattatgag-gaacaggttctaac 10650337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 10731109 - 10731038
Alignment:
Q  164 aatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaacaggcagcttgt 234  Q
    ||||||||| ||||||||||||||||||||||||||| | |||||||||| || ||| || ||| |||||||    
T  10731109 aatacatcattagaatgttccacaagaaatcatgggcttttaggtcagaagtaaacttaataggtagcttgt 10731038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 10944878 - 10944807
Alignment:
Q  164 aatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaacaggcagcttgt 234  Q
    ||||||||| ||||||||||||||||||||||||||| | |||||||||| || ||| || ||| |||||||    
T  10944878 aatacatcattagaatgttccacaagaaatcatgggcttttaggtcagaagtaaacttaataggtagcttgt 10944807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 460
Target Start/End: Original strand, 18081631 - 18081728
Alignment:
Q  372 ttcaacccaacaa-caagtcttaagtgagtgtgtgc------tccaacctttttcttgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||||||||| |||||||||||||||||||||       ||||||| ||||||||||||||| ||||  |||||||||||| ||||| |||||||    
T  18081631 ttcaacccaacaatcaagtcttaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgtataagatagatattatgaggaaacatgttctaa 18081728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 13622273 - 13622215
Alignment:
Q  164 aatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    ||||||||| |||||||||||||||||||||| |||| | ||||||||||||| |||||    
T  13622273 aatacatcactagaatgttccacaagaaatcaagggcttttaggtcagaaataaactaa 13622215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 371 - 452
Target Start/End: Original strand, 8092598 - 8092684
Alignment:
Q  371 attcaacccaacaa-caagtcttaagtgagtgtgtgc--tccaacctttttcttgctcctgtgtaag--agatattatgagaaaaca 452  Q
    |||||||||||||| |||||  ||||||||||||||   ||||||| ||||||||||||||| ||||  |||||||||||| |||||    
T  8092598 attcaacccaacaatcaagttctaagtgagtgtgtgtaatccaacccttttcttgctcctgtataagatagatattatgaggaaaca 8092684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 16682834 - 16682766
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  | |||  |||||||| ||||||||||||||||||||||||||    
T  16682834 actaatcacaacttcaagtattccttgtaaacttattcaaccaaacaacaagtcttaagtgagtgtgtg 16682766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 10731219 - 10731176
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  10731219 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 10731176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 10944988 - 10944945
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  10944988 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 10944945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 13622374 - 13622331
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  13622374 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 13622331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 407 - 452
Target Start/End: Complemental strand, 3354640 - 3354593
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaag--agatattatgagaaaaca 452  Q
    ||||||| ||||||||||||||| ||||  ||||||||||||||||||    
T  3354640 tccaacccttttcttgctcctgtataagatagatattatgagaaaaca 3354593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 3392031 - 3391995
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttatt 64  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  3392031 aaagtaaataacaagaaagtaaaggtgaacttttatt 3391995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 18080955 - 18080991
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttatt 64  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  18080955 aaagtaaataacaagaaagtaaaggtgaacttttatt 18080991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 3e-58; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 20860759 - 20860953
Alignment:
Q  43 aaaataaagatgaacttttattcaaag-aaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagc 140  Q
    ||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||  |||||||||||||||||| |||||||||     
T  20860759 aaaataaagatgaacttttattcaaaggaaacaattgtcactattaatttccaagaacaagagatgattgtatatgtttgctagctgctctatttatagt 20860858  T
Q  141 ctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagac-taaacaggcagcttgt 234  Q
    ||| |||||||| |||||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||||||| || ||||||| ||||||||    
T  20860859 ctacaactacttaagccccaagaaatacatcaatggaatgttccacaagaaaccatgggctttaggtcagaaataaacttaaacagacagcttgt 20860953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 54 - 222
Target Start/End: Complemental strand, 23298956 - 23298787
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactactt 152  Q
    ||||||||||||||||||| |||| || ||  ||||||| |||||||||||||||||||||||||||||||||| || ||||||||| |||  || ||||    
T  23298956 gaacttttattcaaagaaataattctcgctattaatttcaaagaacaaaagatgattcaatatgtttgctagctactctatttatagtctacgacaactt 23298857  T
Q  153 tagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaa 222  Q
     |||||||| ||||||||||||| |||||||||||| ||| |||||||| ||||||||||||| ||||||    
T  23298856 aagccccaagaaatacatcaataaaatgttccacaaaaaaccatgggctttaggtcagaaataaactaaa 23298787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 240 - 461
Target Start/End: Original strand, 16382613 - 16382848
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcattgttctaagcgtaaact 339  Q
    |||||||| | ||||||||||||| ||||||||||| ||||||||||| ||||| || ||||    ||||||||||||||| ||||||| |  ||| |||    
T  16382613 aagcaaaaggaataaacattagcagcataaacaagacttaacatatgataacataattaaaaactttgtctcctccaaggctttgttcttaaagtacact 16382712  T
Q  340 aatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg--------------ctccaacctttttcttgctc 425  Q
    |||||||||||||||||| | || |||||| ||||||||||||||||||||| |||||||||||||               ||||||| ||||||||| |    
T  16382713 aatcacaacttcaagcatctctcgtgaaccgattcaacccaacaacaagtctcaagtgagtgtgtgtgtgtgtgtgtgtagtccaacccttttcttgccc 16382812  T
Q  426 ctgtgtaagagatattatgagaaaacaggttctaac 461  Q
    ||||||||||||||||||||| ||||||||||||||    
T  16382813 ctgtgtaagagatattatgaggaaacaggttctaac 16382848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 62 - 235
Target Start/End: Original strand, 20899426 - 20899599
Alignment:
Q  62 attcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactactttagcccca 160  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||| ||||||  | ||||||||| ||| |||||||| |||||||    
T  20899426 attcaaagaaacaattgtcacttattatttccaagaacaaaagatgaatgaatatgttttctagctattctatttatagtctacaactacttaagcccca 20899525  T
Q  161 ataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgtt 235  Q
    | |||||||| |||||||||||| ||| |||| ||| |||| ||||| ||||||| |||||| ||||||||||||    
T  20899526 agaaatacataaatagaatgttctacaggaaaccat-ggctttaggttagaaataaactaaataggcagcttgtt 20899599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 26194308 - 26194180
Alignment:
Q  57 cttttattcaaaga-aacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactacttta 154  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| |    
T  26194308 cttttattcaaagataacaattgtcactattaatttccaagaacaaaagatgattcaatatgtttgctagttgctctatttatagtctataactacttaa 26194209  T
Q  155 gccccaataaatacatcaatagaatgttc 183  Q
    | || || |||||||| ||||||||||||    
T  26194208 gtccgaagaaatacattaatagaatgttc 26194180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 44 - 221
Target Start/End: Original strand, 13799464 - 13799643
Alignment:
Q  44 aaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcct 142  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||||  ||||||||||||||||   | ||| |||||||| || |||||||||  |    
T  13799464 aaataaagatgaacttttattcaaataaacaattgtcacttattatttcagagaacaaaagatgatttgttgtgtctgctagctactctatttatagttt 13799563  T
Q  143 ataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    | ||  |||| || || || ||||| |||| ||||||||||||||||||| ||||||| | |||||||| |||| |||||    
T  13799564 acaatgacttaagacctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcaggaataaactaa 13799643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 25405084 - 25405159
Alignment:
Q  33 aaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  25405084 aaataacaagaaaataaagaagaacttttattaaaagaaacaattgtcacttattatttccaagaacaaaagatga 25405159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 2386314 - 2386234
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  2386314 aaagtaaataacaagaaagtaaaggtaaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 2386234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 21792346 - 21792426
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  21792346 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 21792426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 21784220 - 21784300
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||   ||||||||||||||    
T  21784220 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattattttagagaacaaaagatga 21784300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 30819061 - 30819122
Alignment:
Q  40 aagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaa 101  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30819061 aagaaagtaaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaa 30819122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 221
Target Start/End: Complemental strand, 17716829 - 17716649
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcc 141  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||   |||||||||||| | |   |||| | ||||||| || ||||||||| |    
T  17716829 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattattttagagaacaaaagataaattgttatgatagctagctactctatttatagtc 17716730  T
Q  142 tataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    |||||| |||| |  || ||  ||||||||| ||||||| ||||||||||  || |||| | ||||||||||||| |||||    
T  17716729 tataacaacttaaaacctaagcaatacatcactagaatggtccacaagaagccaagggcttttaggtcagaaataaactaa 17716649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 28206359 - 28206439
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  28206359 aaagtaaatgacaagaaagtaaaggtgaatttttattcaaagaaacaattgtcacttattatttctgagaacaaaagatga 28206439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 234
Target Start/End: Original strand, 16384974 - 16385157
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataact-act 151  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||  | | | ||| | |||||| ||||||||| |||  | | |||    
T  16384974 gaacttttattcaaagaaacaattgtcacttataatttcaaagaacaaaagacgattatacaaggttgatggctgctctatttatagtctaacattgact 16385073  T
Q  152 ttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagact-aaacaggcagcttgt 234  Q
    | ||||| |  ||||| |||| |||| |||| |||||||||   |||||| ||||||||||||| ||| ||||||| |||||||    
T  16385074 taagccctacgaaataaatcactagagtgttacacaagaaactgtgggctttaggtcagaaataaactcaaacaggaagcttgt 16385157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 48256378 - 48256209
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactact 151  Q
    ||||||||||||||||||||||||||| |||||| | ||||||||||||||||||| |   |||  | ||||||| || ||||||||| ||||||| |||    
T  48256378 tgaacttttattcaaagaaacaattgttacttatta-ttccaagaacaaaagatgaattgttataatagctagctactctatttatagtctataacgact 48256280  T
Q  152 ttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    | |  || ||  ||||||||| |||||||||||| |||||| || |||| | ||||||||||||| |||||    
T  48256279 taaaacctaagtaatacatcactagaatgttccataagaaaccaagggcttttaggtcagaaataaactaa 48256209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 53 - 106
Target Start/End: Complemental strand, 17986637 - 17986584
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagat 106  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17986637 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagat 17986584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 41802348 - 41802283
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  41802348 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcatagaacaaaagatga 41802283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 8648930 - 8648876
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatg 107  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  8648930 tgaacttttattcaaagaaacaattgtcacttattattttcaagaacaaaagatg 8648876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 39286642 - 39286696
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatg 107  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  39286642 tgaacttttattcaaagaaacaattgtcacttattttttccaagaacaaaagatg 39286696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 459
Target Start/End: Original strand, 21784605 - 21784733
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaacca-attcaacccaacaacaagtcttaagtgagtgtgtgc----tccaacctttttcttgctcctgtgt 431  Q
    |||||||||||||||||| |||| |  |||||   |||||||||||||||||||||||||||||||||||     ||||||| ||||||||||| ||| |    
T  21784605 actaatcacaacttcaagtatttcttgtgaactttattcaacccaacaacaagtcttaagtgagtgtgtgtgttgtccaacccttttcttgctcttgtat 21784704  T
Q  432 aag--agatattatgagaaaacaggttcta 459  Q
    |||  |||||||||||| ||| ||||||||    
T  21784705 aagatagatattatgaggaaa-aggttcta 21784733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 26134537 - 26134601
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| |||||  ||||||||||||||    
T  26134537 aaaataaaggtgaacttttattcaaa-aaacaattgtcacttattatttcagagaacaaaagatga 26134601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 28207969 - 28207904
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||| ||||||| ||||||||| |||| ||| ||||||||||||    
T  28207969 aaaataaaggtgaacttttattcaaataaacaatggtcacttattatttgcaaaaacaaaagatga 28207904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 44538318 - 44538253
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||  ||||   ||||||||||||||    
T  44538318 aaaataaaggtgaacttttattcaaagaaacaattgtcacttaatatttttgagaacaaaagatga 44538253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 425
Target Start/End: Complemental strand, 4027762 - 4027672
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg--ctccaacctttttcttgctc 425  Q
    ||||||||||||| |||| |||  |  |||||| ||||||||||||||||||||| |||||||||||||   ||||||| |||||||||||    
T  4027762 actaatcacaactccaagtattccttgtgaacctattcaacccaacaacaagtctcaagtgagtgtgtgtagtccaaccattttcttgctc 4027672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 8947648 - 8947763
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtga----gtgtgtgctccaacctttttcttgctcctgtgta 432  Q
    |||||||||||||||||| |||  |  |||||| ||||||||||||||||||||| ||||||    ||||||  ||||||| ||||||| ||||||| ||    
T  8947648 actaatcacaacttcaagtattccttgtgaacctattcaacccaacaacaagtctcaagtgagcgtgtgtgtagtccaaccattttctttctcctgtata 8947747  T
Q  433 ag--agatattatgag 446  Q
    ||  ||||||||||||    
T  8947748 agacagatattatgag 8947763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 372 - 460
Target Start/End: Complemental strand, 3989982 - 3989885
Alignment:
Q  372 ttcaacccaacaa-caagtcttaagtgagtgtgtgc------tccaacctttttcttgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    ||||||||||||| |||||||||||||||||||||       ||||||| ||||||||||||||| ||||  |||||||||||| ||||| |||||||    
T  3989982 ttcaacccaacaatcaagtcttaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgtataagatagatattatgaggaaacatgttctaa 3989885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 460
Target Start/End: Complemental strand, 8653240 - 8653067
Alignment:
Q  295 atcaaaactcatgtctcctccaaggcattgttct-aagcgtaaactaatcacaacttcaagcatttttcatgaacca-attcaacccaacaa-caagtct 391  Q
    |||||||||||||||||||| ||||| ||  | | ||||||| |||||||||||  |||||||||| |  | | |   |||||||||||||| |||||      
T  8653240 atcaaaactcatgtctcctcaaaggctttaatttcaagcgtacactaatcacaaactcaagcatttcttgtaatctttattcaacccaacaatcaagttc 8653141  T
Q  392 taagtgagtgtgtgc--tccaacctttttcttgctcctgtgtaag--agatattatga-gaaaacaggttctaa 460  Q
    |||||| |||||||   ||||||| ||||||||||||||| ||||  ||||||||||| |||||||||||||||    
T  8653140 taagtgtgtgtgtgtagtccaacccttttcttgctcctgtataagatagatattatgaggaaaacaggttctaa 8653067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 15346876 - 15346935
Alignment:
Q  48 aaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatg 107  Q
    ||||| ||||||||||| |  |||||||||||||| ||||||| ||||||||||||||||    
T  15346876 aaagaagaacttttatttatggaaacaattgtcacatataattcccaagaacaaaagatg 15346935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 108
Target Start/End: Complemental strand, 20412328 - 20412277
Alignment:
Q  57 cttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||| ||  ||||||||||||||||| |||||||||||||||||||||    
T  20412328 cttttattaaagaaaacaattgtcacttattatttccaagaacaaaagatga 20412277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 26192209 - 26192140
Alignment:
Q  178 atgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgtttgggaagcaaaa 247  Q
    |||||| |||||||| ||||| || ||||||||||||| |||||||||| |||||||  | |||||||||    
T  26192209 atgttctacaagaaaccatggactttaggtcagaaataaactaaacaggaagcttgtccgagaagcaaaa 26192140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 154 - 215
Target Start/End: Original strand, 30819193 - 30819254
Alignment:
Q  154 agccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||||||| || || |||| || |||||| ||||||||| ||||||||||||||||||||||    
T  30819193 agccccaagaattaaatcactaaaatgttgcacaagaaaccatgggctctaggtcagaaata 30819254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Complemental strand, 16431634 - 16431590
Alignment:
Q  27 gaaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||    
T  16431634 gaaagtaaataacaataaaataaaggtgaacttttattccaagaa 16431590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 20493543 - 20493488
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    |||||||||||||| |||| || ||||||||||||||||||| ||||||| ||||||    
T  20493543 gaacttttattcaatgaaa-aagtgtcacttataatttccaaaaacaaaatatgatt 20493488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 52235873 - 52235916
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| |||||||||||| |||||||||| |||||    
T  52235873 aaagtaaataacaataaaataaagatgtacttttattccaagaa 52235916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 359
Target Start/End: Complemental strand, 19364206 - 19364088
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaa-caagatttaacatatgacaacattatcaaaactcatgtctcctccaaggc-attgttctaagcgtaaa 337  Q
    |||||||||||||| |||| |||| |||||| |||||||  |||||||||||    |||||||||||||||||||| |||||  || ||  ||||||| |    
T  19364206 aagcaaaatgcatagacat-agcagcataaaacaagatt--acatatgacaattcaatcaaaactcatgtctcctcaaaggcttttatttcaagcgtaca 19364110  T
Q  338 ctaatcacaacttcaagcattt 359  Q
    ||||||||||  ||||||||||    
T  19364109 ctaatcacaaactcaagcattt 19364088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 112
Target Start/End: Complemental strand, 24680177 - 24680119
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattca 112  Q
    |||||||| |||||||||| | ||||||| || |||  |||||||||||||||||||||    
T  24680177 gaacttttgttcaaagaaatagttgtcacataaaatccccaagaacaaaagatgattca 24680119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 247
Target Start/End: Complemental strand, 16431523 - 16431440
Alignment:
Q  164 aatacatcaatagaatgttccacaagaaatc-atgggctctaggtcagaaatagactaaacaggcagcttgtttgggaagcaaaa 247  Q
    ||||||||| ||||||||||||||||||| | ||||  | ||||||||||||| ||| || ||| ||||||| ||| ||||||||    
T  16431523 aatacatcactagaatgttccacaagaaaccaatggcttttaggtcagaaataaact-aataggtagcttgtctggaaagcaaaa 16431440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 405
Target Start/End: Original strand, 19875782 - 19875850
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||| |||||||||||||||  |   ||||| ||||||||||||||||||||  || ||||||||||    
T  19875782 actaataacaacttcaagcattccttgcgaacctattcaacccaacaacaagtccgaaatgagtgtgtg 19875850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0855 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0855
Description:

Target: scaffold0855; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 28 - 231
Target Start/End: Complemental strand, 3557 - 3352
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagct 127  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  3557 aaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagct 3459  T
Q  128 gct-tatttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaaca 224  Q
    ||| ||||||||||||| |||| |||| ||||| || |||||||||||||||||||||||||||||| |||| || | |||||||||| || ||| || |    
T  3458 gctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaaccatgagcttttaggtcagaattacacttaaaa 3359  T
Q  225 ggcagct 231  Q
    |||||||    
T  3358 ggcagct 3352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0847 (Bit Score: 107; Significance: 2e-53; HSPs: 1)
Name: scaffold0847
Description:

Target: scaffold0847; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 28 - 231
Target Start/End: Complemental strand, 3722 - 3517
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagct 127  Q
    |||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||    
T  3722 aaagtaaataacaataaaataaaga-gaacttttattctaagaaacaattgtcacttataatttccaagaacaaaagatgaaaatatatgtttgctagct 3624  T
Q  128 gct-tatttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaaca 224  Q
    ||| ||||||||||||| |||| |||| ||||| || |||||||||||||||||||||||||||||| |||| || | |||||||||| || ||| || |    
T  3623 gctctatttatagcctaaaactaacttaagccctaagaaatacatcaatagaatgttccacaagaaaccatgagcttttaggtcagaattacacttaaaa 3524  T
Q  225 ggcagct 231  Q
    |||||||    
T  3523 ggcagct 3517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 28 - 222
Target Start/End: Complemental strand, 168284 - 168089
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagct 127  Q
    ||||||||||||||||||||||||| |||  |||||| ||||||| |||||||||||| ||||||||||||||||||||||||  |||||| ||||||||    
T  168284 aaagtaaataacaagaaaataaagaagaa--tttatttaaagaaataattgtcacttagaatttccaagaacaaaagatgattagatatgtctgctagct 168187  T
Q  128 gcttatttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaa-tcatgggc-tctaggtcagaaatagactaaa 222  Q
    |||  ||||||||||| |||| |||| ||||| || |||||||||||||||||||||||||||||| |||||||| | ||||||||||||| ||||||    
T  168186 gctcttttatagcctaaaactaacttaagcccaaagaaatacatcaatagaatgttccacaagaaactcatgggcttttaggtcagaaataaactaaa 168089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 4e-48; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 240 - 461
Target Start/End: Complemental strand, 29686619 - 29686390
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcattgttctaagcgtaaact 339  Q
    |||||| | ||||||||||||||| ||||||||| ||||||||||||||||||  || ||||||| | ||||||||||||| ||||| |  | ||| |||    
T  29686619 aagcaagaggcataaacattagcagcataaacaaaatttaacatatgacaacacaattaaaactcttttctcctccaaggctttgttattggtgtacact 29686520  T
Q  340 aatcacaacttcaagcatttttcatgaaccaattcaacccaacaa-caagtcttaagtgagtgtgtg--------ctccaacctttttcttgctcctgtg 430  Q
    ||||||||||||| |||||| ||||||||| |||||||||||||| ||||||| |||||||||||||         ||||| ||||||||||||||||||    
T  29686519 aatcacaacttcaggcatttctcatgaacctattcaacccaacaatcaagtctcaagtgagtgtgtgtgtgtgtagtccaa-ctttttcttgctcctgtg 29686421  T
Q  431 taagagatattatgagaaaacaggttctaac 461  Q
    |||||||||||||||| ||||| ||||||||    
T  29686420 taagagatattatgaggaaacatgttctaac 29686390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 57 - 188
Target Start/End: Original strand, 31965575 - 31965708
Alignment:
Q  57 cttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataact-acttta 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||| ||||||||||||| |||| |||| |    
T  31965575 cttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgacaatatatgtttgctagctgctctatttatagcctaaaactaacttaa 31965674  T
Q  155 gccccaataaatacatcaatagaatgttccacaa 188  Q
    ||||||| ||||||||||||||||||||||||||    
T  31965675 gccccaagaaatacatcaatagaatgttccacaa 31965708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 55 - 247
Target Start/End: Original strand, 23348176 - 23348369
Alignment:
Q  55 aacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactacttt 153  Q
    |||||||||||||||||||||||||||||  |||||||  |||||||||||||| | ||| || ||||||||| || ||||||||| ||| ||||||||     
T  23348176 aacttttattcaaagaaacaattgtcactattaatttcagagaacaaaagatgaataaatgtgattgctagctactctatttatagtctacaactactta 23348275  T
Q  154 agccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgtttgggaagcaaaa 247  Q
    |||||||| ||||||||||||| ||||||||||| |||| |||||||| ||||||| ||||| |||||| ||| | |||||  | |||||||||    
T  23348276 agccccaagaaatacatcaatataatgttccacatgaaaccatgggctttaggtcataaataaactaaataggtaacttgtacgagaagcaaaa 23348369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 28 - 228
Target Start/End: Complemental strand, 29682683 - 29682479
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagct 127  Q
    |||||||||| |||||||||||||| |||||||||| |||||||| |||||||||||| |||||||||||| |||||||||    |||||| ||||||||    
T  29682683 aaagtaaatagcaagaaaataaagaagaacttttatccaaagaaataattgtcacttagaatttccaagaataaaagatgaaaatatatgtctgctagct 29682584  T
Q  128 gct-tatttatagcctataact-actttagccccaataaatacatcaatagaatgttccacaagaaa-tcatgggc-tctaggtcagaaatagactaaac 223  Q
     || ||||||||||  | |||| |||| |||||||| ||||| ||||||||||||||||||||||||  ||||||| | ||||||||||||| ||||||     
T  29682583 tctctatttatagctaaaaactaacttaagccccaagaaatatatcaatagaatgttccacaagaaacccatgggcttttaggtcagaaataaactaaaa 29682484  T
Q  224 aggca 228  Q
    |||||    
T  29682483 aggca 29682479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 20222995 - 20222860
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagct 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    |||||||| |||| |    
T  20222995 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgagaatatatgttttctagtt 20222896  T
Q  128 gct-tatttatagcctataact-actttagccccaa 161  Q
    ||| ||||||||||||| |||| |||| ||||||||    
T  20222895 gctctatttatagcctaaaactaacttaagccccaa 20222860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 28 - 161
Target Start/End: Complemental strand, 22116979 - 22116844
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagct 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    |||||||| |||| |    
T  22116979 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgagaatatatgttttctagtt 22116880  T
Q  128 gct-tatttatagcctataact-actttagccccaa 161  Q
    ||| ||||||||||||| |||| |||| ||||||||    
T  22116879 gctctatttatagcctaaaactaacttaagccccaa 22116844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 43 - 234
Target Start/End: Complemental strand, 15172318 - 15172125
Alignment:
Q  43 aaaataaagatgaacttttattcaaag--aaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatag 139  Q
    |||||||||||||||||||||||||||  ||||| |||||| |  ||| |||||||| ||| |||||| |||||||||||||||||| || |||||||||    
T  15172318 aaaataaagatgaacttttattcaaaggaaaacagttgtcattattaaattccaagaccaagagatgaatcaatatgtttgctagctactctatttatag 15172219  T
Q  140 cctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgt 234  Q
     ||| |||||||| ||||| || |||||||||||||||||||||||| ||||| | | |||| ||||| ||||||| |||||||| | |||||||    
T  15172218 tctacaactacttaagccc-aagaaatacatcaatagaatgttccacgagaaaccgtcggctttaggttagaaataaactaaacaagaagcttgt 15172125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 47 - 232
Target Start/End: Complemental strand, 18973738 - 18973551
Alignment:
Q  47 taaagatgaacttttattcaaa-gaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctat 144  Q
    |||||||||||||||||||||| |||||||||||||||   ||||||||||||||| |||| ||| |||||||||||||||| || |||||||||  ||     
T  18973738 taaagatgaacttttattcaaaagaaacaattgtcactataaatttccaagaacaagagataattgaatatgtttgctagctactctatttatagtttac 18973639  T
Q  145 aactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagctt 232  Q
    |||||||  | |||||| |||||||| |||||||| |||||||||||| ||  |||| |||| ||||| || |||||| |||||||||    
T  18973638 aactactaaaaccccaagaaatacattaatagaatattccacaagaaaccacaggctttaggacagaagtaaactaaataggcagctt 18973551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 43 - 232
Target Start/End: Original strand, 24392888 - 24393079
Alignment:
Q  43 aaaataaagatgaacttttattcaaag-aaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagc 140  Q
    ||||||||||||||||||||||||||| |||||||| |||||   ||||||||||||||| |||||||| ||||| |||| ||||| || |||||||||     
T  24392888 aaaataaagatgaacttttattcaaaggaaacaattatcactataaatttccaagaacaagagatgattgaatatttttggtagctactctatttatagt 24392987  T
Q  141 ctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagctt 232  Q
     || |||||||  |||||||| ||||||||||||||||| |||||||||||| ||   ||| |||||||||| || |||||  |||||||||    
T  24392988 ttacaactactaaagccccaagaaatacatcaatagaatattccacaagaaaccacatgctttaggtcagaagtaaactaagtaggcagctt 24393079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 48 - 234
Target Start/End: Original strand, 15471100 - 15471288
Alignment:
Q  48 aaagatgaacttttattcaaagaaa--caattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctat 144  Q
    |||||||||||||||||||||||||  ||||||||| |  ||| |||||||| ||| |||||| |||||||||||||||||| || ||||||||| |||     
T  15471100 aaagatgaacttttattcaaagaaaaacaattgtcattattaaattccaagaccaagagatgaatcaatatgtttgctagctactctatttatagtctac 15471199  T
Q  145 aactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgt 234  Q
    || ||||| ||||| || |||||||||||||||||||| ||| ||||| | |||||| ||||| ||||||| |||||||| | |||||||    
T  15471200 aaatacttaagccc-aagaaatacatcaatagaatgttgcacgagaaaccgtgggctttaggttagaaataaactaaacaagtagcttgt 15471288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 58 - 181
Target Start/End: Original strand, 16207759 - 16207883
Alignment:
Q  58 ttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactactttagc 156  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||||||||||||| ||||| ||| ||| |||||||| | |    
T  16207759 ttttattcaaagaaacaattgtcacttataatttctgaaaacaaaagatgactcaatatgtttgctagctgctctatttgtagtctacaactacttaatc 16207858  T
Q  157 cccaataaatacatcaatagaatgt 181  Q
     | || |||||||||||||||||||    
T  16207859 tctaagaaatacatcaatagaatgt 16207883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 47 - 234
Target Start/End: Complemental strand, 15162276 - 15162087
Alignment:
Q  47 taaagatgaacttttattcaaag--aaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagccta 143  Q
    |||||||||||||||||||||||  |||||||||||  |  ||| |||||||| ||| |||||| |||| |||| ||||||||  | ||||||||| |||    
T  15162276 taaagatgaacttttattcaaaggaaaacaattgtctttattaacttccaagaccaagagatgaatcaacatgtatgctagctattctatttatagtcta 15162177  T
Q  144 taactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgt 234  Q
     |||||||| ||||| || |||||||||||||||||||||||| ||||| |  ||||| ||||| ||||||| |||||||||| |||||||    
T  15162176 caactacttaagccc-aagaaatacatcaatagaatgttccacgagaaaccgcgggctttaggttagaaataaactaaacaggaagcttgt 15162087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 20221270 - 20221190
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  20221270 aaagtaaataacaagaaaataaagatgaacacttattcaaaaaaacaattgtcacttattatttccaagaacaaaagatga 20221190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 22115254 - 22115174
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  22115254 aaagtaaataacaagaaaataaagatgaacacttattcaaaaaaacaattgtcacttattatttccaagaacaaaagatga 22115174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 17793991 - 17794149
Alignment:
Q  53 tgaacttttattcaaag--aaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgcttatttatagcctataactac 150  Q
    |||||||||||||||||  ||||||||||||||  ||| |||||||||||| |||||||| |||||||||||||||      |  ||||  || ||||||    
T  17793991 tgaacttttattcaaaggtaaacaattgtcactattaaattccaagaacaagagatgattgaatatgtttgctagc------taaatagtttacaactac 17794084  T
Q  151 tttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    || || ||||| |||||||||| |||||||||||||||||||  ||||||| |||||||||||||    
T  17794085 ttaagacccaagaaatacatcagtagaatgttccacaagaaactatgggctttaggtcagaaata 17794149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 25949392 - 25949222
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactact 151  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |   |||| | ||||||| || ||||||||| ||||||  |||    
T  25949392 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtctataatgact 25949293  T
Q  152 ttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    | |  || ||  ||||||||| ||||||||||||||||||| || |||| | ||||| ||||||| |||||    
T  25949292 taaaacctaagcaatacatcactagaatgttccacaagaaaccaagggcttttaggtaagaaataaactaa 25949222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 24218809 - 24218729
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  24218809 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 24218729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 25402458 - 25402538
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  25402458 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 25402538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 40 - 110
Target Start/End: Original strand, 12660476 - 12660546
Alignment:
Q  40 aagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||    
T  12660476 aagaaaataaagatgaacttttattcaaagaaacaattgtcacttattattttcaagaaaaaaagatgatt 12660546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 25963992 - 25963822
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactact 151  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |   |||| | ||||||| || ||||||||| | ||||| |||    
T  25963992 tgaactttaattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtcgataacgact 25963893  T
Q  152 ttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    | |  || ||  ||||||||| |||||||||||||||||||  | |||| | ||||||||||||| |||||    
T  25963892 taaaacctaagcaatacatcactagaatgttccacaagaaactaagggcttttaggtcagaaataaactaa 25963822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 53 - 221
Target Start/End: Complemental strand, 25968639 - 25968469
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactact 151  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |   |||| | ||||||| || ||||||||| | ||||| |||    
T  25968639 tgaactttaattcaaagaaacaattgtcacttattatttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtcgataacgact 25968540  T
Q  152 ttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    | |  || ||  ||||||||| |||||||||||||||||||  | |||| | ||||||||||||| |||||    
T  25968539 taaaacctaagcaatacatcactagaatgttccacaagaaactaagggcttttaggtcagaaataaactaa 25968469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 210137 - 210217
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| || |||||  ||||||||||||||    
T  210137 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcactcattatttcagagaacaaaagatga 210217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 18448864 - 18448784
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| |  ||||||||||||||    
T  18448864 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattattacagagaacaaaagatga 18448784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 18844555 - 18844475
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  18844555 aaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 18844475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 234
Target Start/End: Complemental strand, 26821929 - 26821762
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgcttatttatagcctataactacttt 153  Q
    ||||||||||| ||||||| ||||||||||||| | |||||||||||||| |||||| | |||| ||||||| |             ||| ||||||||     
T  26821929 gaacttttattaaaagaaataattgtcacttattaattccaagaacaaaatatgatttattatgattgctaggt-------------ctacaactactta 26821843  T
Q  154 agccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagcttgt 234  Q
    ||||| || |||||||||||||||||||| ||||||||| |||||||| ||||| ||||||| |||||| ||| |||||||    
T  26821842 agccctaagaaatacatcaatagaatgtttcacaagaaaccatgggctttaggttagaaataaactaaataggtagcttgt 26821762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 18854713 - 18854633
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||  |||||  ||||||||||||||    
T  18854713 aaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttaatatttcagagaacaaaagatga 18854633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 17743582 - 17743527
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  17743582 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 17743527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 108
Target Start/End: Original strand, 18233834 - 18233889
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18233834 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 18233889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 20464440 - 20464386
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20464440 gaacttttattcaaagaaacaattgtcacttataattttcaagaacaaaagatga 20464386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 101
Target Start/End: Original strand, 12658048 - 12658109
Alignment:
Q  40 aagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaa 101  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||    
T  12658048 aagaaaataaagatgaacttttattcaaagaaacaattgtcgcttattatttccaacaacaa 12658109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 18195539 - 18195604
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  18195539 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 18195604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 105
Target Start/End: Original strand, 18184403 - 18184465
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaaga 105  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||||    
T  18184403 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaaga 18184465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 145 - 215
Target Start/End: Original strand, 19612852 - 19612922
Alignment:
Q  145 aactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||||||| |||||||  ||||| |||||||||||||||||||||||| |||||||| |||||||||||||    
T  19612852 aactacttaagccccatgaaatatatcaatagaatgttccacaagaaaccatgggctttaggtcagaaata 19612922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 20221186 - 20221110
Alignment:
Q  154 agccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagct 231  Q
    |||||||| |||||||||||||||||||||||||||||| ||||| || |||||||||| || |||||| ||||||||    
T  20221186 agccccaagaaatacatcaatagaatgttccacaagaaaacatggtct-taggtcagaattatactaaaaaggcagct 20221110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 22115170 - 22115094
Alignment:
Q  154 agccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagct 231  Q
    |||||||| |||||||||||||||||||||||||||||| ||||| || |||||||||| || |||||| ||||||||    
T  22115170 agccccaagaaatacatcaatagaatgttccacaagaaaacatggtct-taggtcagaattatactaaaaaggcagct 22115094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 234
Target Start/End: Original strand, 25339247 - 25339450
Alignment:
Q  33 aaataacaagaaaataaa-gatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct- 130  Q
    ||||||||||||| |||| || ||||||||||| | | | ||||||||||||  | | ||||||||||||||||||| |   | || ||||||||| ||     
T  25339247 aaataacaagaaagtaaaagaagaacttttattaagaaagacaattgtcactattgaattccaagaacaaaagatgaattgttgtgattgctagctactc 25339346  T
Q  131 tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaaacaggcag 229  Q
    |||||||||  || ||  |||| ||||| || ||||| |||| ||||||||||||||||||| || |||| | ||||||||||||| ||| || ||||||    
T  25339347 tatttatagtttacaatgacttaagccctaagaaatatatcactagaatgttccacaagaaaccacgggcttttaggtcagaaataaact-aataggcag 25339445  T
Q  230 cttgt 234  Q
    |||||    
T  25339446 cttgt 25339450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 30245298 - 30245243
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||    
T  30245298 tgaacttttattcaaataaacaattgtcacttattatttccaagaacaaaatatga 30245243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 192
Target Start/End: Original strand, 25923387 - 25923548
Alignment:
Q  33 aaataacaagaaaataaa-gatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct- 130  Q
    ||||||||||||| |||| || ||||||||||| | | | ||||||||||||  | | ||||||||||||||||||| |   |||| ||||||||| ||     
T  25923387 aaataacaagaaagtaaaagaagaacttttattaagaaagacaattgtcactattgaattccaagaacaaaagatgaattgttatgattgctagctactc 25923486  T
Q  131 tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaa 192  Q
    |||||||||  || |   |||| ||||| || |||||||||| |||||||||||||||||||    
T  25923487 tatttatagtttacattgacttaagccctaagaaatacatcactagaatgttccacaagaaa 25923548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 3923718 - 3923656
Alignment:
Q  48 aaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||| |||||||||||||||| |||||||||||||  |||||||  ||||||||||||||||    
T  3923718 aaagaagaacttttattcaaagtaacaattgtcactattaatttcagagaacaaaagatgatt 3923656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 9414412 - 9414358
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||||||| |||||||||| | |||| |||||||||||||||||    
T  9414412 gaacttttattcaaagaaataattgtcactaagaattcccaagaacaaaagatga 9414358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 371 - 446
Target Start/End: Complemental strand, 11203894 - 11203811
Alignment:
Q  371 attcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtgtaag--agatattatgag 446  Q
    |||||||||||||||||||||||||||||||||||       ||||||| ||||||||||||||| ||||  ||||||||||||    
T  11203894 attcaacccaacaacaagtcttaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgtataagatagatattatgag 11203811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 13217349 - 13217394
Alignment:
Q  33 aaataacaagaaaataaagatgaacttttattcaaagaaacaattg 78  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  13217349 aaataacaagaaaataaagaagaacttttattaaaagaaacaattg 13217394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 18627512 - 18627324
Alignment:
Q  33 aaataacaagaaaataaagatgaacttttattcaaagaa-acaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct- 130  Q
    ||||||||||||| ||||   ||||||||||| |||||| ||||||||||||  | | |||||| |||||||||||| |   | || ||||||||| ||     
T  18627512 aaataacaagaaagtaaaa--gaacttttatt-aaagaagacaattgtcactattgaattccaataacaaaagatgaattgttgtgattgctagctactc 18627416  T
Q  131 tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    |||||||||  || ||  |||| ||||| || ||||| |||| ||||||||||||||| ||| ||||||| | ||||||||||||| |||||    
T  18627415 tatttatagtttacaatgacttaagccctaagaaatatatcattagaatgttccacaaaaaaccatgggcttttaggtcagaaataaactaa 18627324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 18731798 - 18731730
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  |||||| ||||| ||||||||||||||| |||||||||||||    
T  18731798 actaatcacaacttcaagtattccttgtgaacctattcagcccaacaacaagtctcaagtgagtgtgtg 18731730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 35270922 - 35270854
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  | |||  |||||||||||||||||||||||||||||||||||    
T  35270922 actaatcacaacttcaagtattccttgtaaacttattcaacccaacaacaagtcttaagtgagtgtgtg 35270854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 25031232 - 25031295
Alignment:
Q  48 aaagatgaacttttattcaaagaaa-caattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||| ||||||||||||||||||| |||||||||||  |||||||  ||||||||||||||||    
T  25031232 aaagaagaacttttattcaaagaaaacaattgtcactattaatttcagagaacaaaagatgatt 25031295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 90 - 247
Target Start/End: Complemental strand, 32543290 - 32543132
Alignment:
Q  90 ttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaa 188  Q
    ||||||||| ||||||||| | | |||| | ||||||| || ||||||||| ||||||| |||| |  || ||  ||||||||| ||| |||||||||||    
T  32543290 ttccaagaataaaagatgaattattatgatagctagctactctatttatagtctataacgacttaaaacctaagcaatacatcactaggatgttccacaa 32543191  T
Q  189 gaaatcatgggc-tctaggtcagaaatagactaaacaggcagcttgtttgggaagcaaaa 247  Q
    |||| || |||| | ||||||||||||| ||| || ||| ||||||| ||| ||||||||    
T  32543190 gaaaccaagggcttttaggtcagaaataaact-aataggtagcttgtctggaaagcaaaa 32543132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 149 - 221
Target Start/End: Complemental strand, 18993164 - 18993091
Alignment:
Q  149 actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    |||| ||||| || ||||| |||| ||||||||||||||||||| ||||||| | ||||||||||||| |||||    
T  18993164 acttaagccctaagaaatatatcactagaatgttccacaagaaaccatgggcttttaggtcagaaataaactaa 18993091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 17284076 - 17284120
Alignment:
Q  27 gaaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    ||||||||||||||| ||||||||| ||||||||||||| |||||    
T  17284076 gaaagtaaataacaataaaataaaggtgaacttttattccaagaa 17284120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 460
Target Start/End: Original strand, 25631483 - 25631538
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaaga--gatattatgagaaaacaggttctaa 460  Q
    ||||||| ||||||||||||||| |||||  ||||||||||||||||| |||||||    
T  25631483 tccaacccttttcttgctcctgtataagatagatattatgagaaaacatgttctaa 25631538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 5399300 - 5399257
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  5399300 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 5399257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 19612736 - 19612812
Alignment:
Q  32 taaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    |||||||||||||||||||   ||||||||||| ||  ||||||||||||||  | | || ||||||||||||||||||    
T  19612736 taaataacaagaaaataaaa--gaacttttattaaagaaaacaattgtcactattgaatttcaagaacaaaagatgatt 19612812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 23524094 - 23524133
Alignment:
Q  179 tgttccacaagaaatcatgggctctaggtcagaaatagac 218  Q
    |||| ||||||||| |||||||||||||||||||||||||    
T  23524094 tgttgcacaagaaaacatgggctctaggtcagaaatagac 23524133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 105
Target Start/End: Complemental strand, 25507651 - 25507616
Alignment:
Q  70 aaacaattgtcacttataatttccaagaacaaaaga 105  Q
    ||||||||||||||||| ||||||||||||||||||    
T  25507651 aaacaattgtcacttattatttccaagaacaaaaga 25507616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 28734154 - 28734217
Alignment:
Q  48 aaagatgaacttttattcaaagaaa-caattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||| ||| ||||||||||||||| |||||||||||  ||| |||| ||||||||||||||||    
T  28734154 aaagaagaaattttattcaaagaaagcaattgtcactattaaattccgagaacaaaagatgatt 28734217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 29093589 - 29093486
Alignment:
Q  90 ttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaa 188  Q
    ||||||||||||||||||| |   |||| | ||||||| || ||||||||| ||||||| |||| |  || ||  ||||||||| |||||||||||||||    
T  29093589 ttccaagaacaaaagatgaattgttatgatagctagctactctatttatagtctataacgacttaaaacctaagcaatacatcactagaatgttccacaa 29093490  T
Q  189 gaaa 192  Q
    ||||    
T  29093489 gaaa 29093486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Complemental strand, 32543325 - 32543282
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  32543325 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 32543282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 12658152 - 12658218
Alignment:
Q  149 actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||| || ||||| |||| || | |||| ||||||||| ||||||||||||||||||||||    
T  12658152 acttgagccctaagaaataaatcactaaagtgttgcacaagaaaccatgggctctaggtcagaaata 12658218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 18396623 - 18396689
Alignment:
Q  149 actttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||| || ||||| |||| || | |||| ||||||||| ||||||||||||||||||||||    
T  18396623 acttgagccctaagaaataaatcactaaagtgttgcacaagaaaccatgggctctaggtcagaaata 18396689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 5399199 - 5399138
Alignment:
Q  154 agccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||||||| || || |||| || | |||| ||||||||| ||||||||||||||||||||||    
T  5399199 agccccaagaattaaatcactaaagtgttgcacaagaaaccatgggctctaggtcagaaata 5399138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 461
Target Start/End: Complemental strand, 25963242 - 25963186
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaaga--gatattatgagaaaacaggttctaac 461  Q
    ||||||| ||||||||| ||||| |||||  ||||||||||| ||||||||||||||    
T  25963242 tccaacccttttcttgcgcctgtataagatagatattatgaggaaacaggttctaac 25963186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 461
Target Start/End: Complemental strand, 25967889 - 25967833
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaaga--gatattatgagaaaacaggttctaac 461  Q
    ||||||| ||||||||| ||||| |||||  ||||||||||| ||||||||||||||    
T  25967889 tccaacccttttcttgcgcctgtataagatagatattatgaggaaacaggttctaac 25967833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 163 - 192
Target Start/End: Complemental strand, 29686815 - 29686786
Alignment:
Q  163 aaatacatcaatagaatgttccacaagaaa 192  Q
    ||||||||||||||||||||||||||||||    
T  29686815 aaatacatcaatagaatgttccacaagaaa 29686786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 371 - 452
Target Start/End: Complemental strand, 2181099 - 2181013
Alignment:
Q  371 attcaacccaacaac-aagtcttaagtgagtgtgtgc--tccaacctttttcttgctcctgtgtaag--agatattatgagaaaaca 452  Q
    ||||||| ||||||| |||| | |||||||||||||   ||||||| ||||||||||||||| ||||  |||||||||||| |||||    
T  2181099 attcaactcaacaaccaagtttcaagtgagtgtgtgtagtccaacccttttcttgctcctgtataagatagatattatgaggaaaca 2181013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 2197273 - 2197317
Alignment:
Q  27 gaaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    ||||||||||||||| ||||||||| |||| |||||||| |||||    
T  2197273 gaaagtaaataacaataaaataaaggtgaaattttattccaagaa 2197317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 12660616 - 12660652
Alignment:
Q  179 tgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  12660616 tgttgcacaagaaaccatgggctctaggtcagaaata 12660652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 23517346 - 23517422
Alignment:
Q  35 ataacaagaaaataaa-gatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    |||||||||||||||| || ||||||||||| ||  ||||||||||||||  | | ||||| |||||||| ||||||    
T  23517346 ataacaagaaaataaaagaagaacttttattaaagaaaacaattgtcactattgaattccatgaacaaaatatgatt 23517422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 29253922 - 29253886
Alignment:
Q  179 tgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  29253922 tgttgcacaagaaaccatgggctctaggtcagaaata 29253886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 89; Significance: 1e-42; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 54 - 192
Target Start/End: Original strand, 82631 - 82771
Alignment:
Q  54 gaacttttattcaaagaaacaattgtcacttat-aatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctataactact 151  Q
    |||| |||||||||||||||||| ||||||||| ||||||||| |||||||||||||| |||||||||||||| | || ||||||||| |||||||||||    
T  82631 gaacctttattcaaagaaacaatggtcacttattaatttccaaaaacaaaagatgattgaatatgtttgctagatactctatttatagtctataactact 82730  T
Q  152 ttagccccaataaatacatcaatagaatgttccacaagaaa 192  Q
    | |||||||| ||||||||||||||||||||||||||||||    
T  82731 taagccccaagaaatacatcaatagaatgttccacaagaaa 82771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 240 - 461
Target Start/End: Original strand, 83196 - 83422
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaactcatgtctcctccaaggcattgttctaagcgtaaact 339  Q
    |||||||| |||||||||||||||  |||||||| |||||||||||||||||||||| ||||||||||||||| | ||||  ||||   ||||||| |||    
T  83196 aagcaaaaggcataaacattagcaggataaacaaaatttaacatatgacaacattattaaaactcatgtctcccctaaggttttgtctcaagcgtacact 83295  T
Q  340 aatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgc------tccaacctttttcttgctcctgtgtaa 433  Q
    ||||||||| |||||||||| ||| || |  |||||||||||||||||||||| |||||||||||        ||| || |||| |||||||||||||||    
T  83296 aatcacaacctcaagcatttctcacgagcttattcaacccaacaacaagtctttagtgagtgtgtctgtgtagtcctac-ttttgcttgctcctgtgtaa 83394  T
Q  434 gagatattatgagaaaacaggttctaac 461  Q
    ||||| | ||||| ||||| ||||||||    
T  83395 gagatctaatgaggaaacatgttctaac 83422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 425024 - 425104
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||   |||||||||||||    
T  425024 aaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagggaacaaaagatga 425104  T

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Target: scaffold0001; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 48 - 198
Target Start/End: Complemental strand, 520821 - 520669
Alignment:
Q  48 aaagatgaacttttattcaaagaaa-caattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctata 145  Q
    ||||| ||||||||||| | ||||| |||||||||||  | | |||||| |||||||||||| |   | || ||||||||| || |||||||||  ||||    
T  520821 aaagaagaacttttattaagagaaaacaattgtcactattgaattccaataacaaaagatgaattgttgtgattgctagctactctatttatagtttata 520722  T
Q  146 actactttagccccaataaatacatcaatagaatgttccacaagaaatcatgg 198  Q
    || |||| |||||||| ||||| |||| ||||||||||||||||||| |||||    
T  520721 acaacttaagccccaagaaatatatcactagaatgttccacaagaaaccatgg 520669  T

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Target: scaffold0157 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 251 - 405
Target Start/End: Original strand, 5710 - 5865
Alignment:
Q  251 ataaacattagcaacataaacaagatttaacatatgacaacattatc-aaaactcatgtctcctccaaggcattgttctaagcgtaaactaatcacaact 349  Q
    |||||||||| |||||| ||||| || ||||| |||||||||| ||  ||||||  ||||||||||||||| ||||| | |||||| |||| ||||||||    
T  5710 ataaacattaacaacattaacaacatctaacacatgacaacataatttaaaacttttgtctcctccaaggctttgttttcagcgtacactagtcacaact 5809  T
Q  350 tcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    ||||| |||| ||||||||| ||||||||||||||||||| | |||||||||||||    
T  5810 tcaagtatttctcatgaacctattcaacccaacaacaagtttcaagtgagtgtgtg 5865  T

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Target: scaffold0157; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 5882 - 5926
Alignment:
Q  413 ctttttcttgctcctgtgtaagagatattatgagaaaacaggttc 457  Q
    ||||||||||||  |||||||||||||||||||| ||||| ||||    
T  5882 ctttttcttgcttatgtgtaagagatattatgaggaaacatgttc 5926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 47 - 232
Target Start/End: Original strand, 22753 - 22940
Alignment:
Q  47 taaagatgaacttttattcaaag-aaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct-tatttatagcctat 144  Q
    ||||||||||||||||||||||| ||||||||||||||   ||||||||||||||| |||||||| |||| |||||| |||| || |||||||||  ||     
T  22753 taaagatgaacttttattcaaaggaaacaattgtcactataaatttccaagaacaagagatgattgaatacgtttgcaagctactctatttatagtttac 22852  T
Q  145 aactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaatagactaaacaggcagctt 232  Q
    |||||||  | |||||| || ||||| |||||||| |||||||||||| ||  |||| |||||||||| || |||||| |||||||||    
T  22853 aactactaaaaccccaagaagtacattaatagaatattccacaagaaaccacaggctttaggtcagaagtaaactaaataggcagctt 22940  T

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Target: scaffold0088 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 38578 - 38505
Alignment:
Q  34 aataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38578 aataacaagaaaataaaga-gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 38505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 461
Target Start/End: Complemental strand, 37888 - 37662
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaa-ctcatgtctcctccaaggcattgttctaagcgtaaac 338  Q
    ||||||||  ||||||||| |||||||||||||| ||| || |||||||||    || |||| || |||||||||| ||||| |  ||  ||| ||| ||    
T  37888 aagcaaaagccataaacat-agcaacataaacaaaattaaa-atatgacaattcaattaaaatcttatgtctcctcaaaggcttaatttcaagtgtacac 37791  T
Q  339 taatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg----ctccaacctttttcttgctcctgtgtaag 434  Q
    |||||||||| ||||| |||  |   ||||| ||||||||||||||||||| | |||||||||||||     | ||||| ||||||||| | ||| ||||    
T  37790 taatcacaacatcaagtattccttgcgaacctattcaacccaacaacaagtttcaagtgagtgtgtgtgaagtgcaacccttttcttgcgcatgtataag 37691  T
Q  435 --agatattatgagaaaacaggttctaac 461  Q
      | |||||||||| ||||||||||||||    
T  37690 atatatattatgaggaaacaggttctaac 37662  T

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Target: scaffold1323 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold1323
Description:

Target: scaffold1323; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 1903 - 1983
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  1903 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 1983  T

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Target: scaffold0123 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 2601 - 2521
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  2601 aaagtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 2521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 14165 - 14007
Alignment:
Q  53 tgaacttttattcaaag--aaacaattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgcttatttatagcctataactac 150  Q
    |||||||||||||||||  ||||||||||||||  ||| |||||||||||| |||||||| |||||||||||||||      |  ||||  || ||||||    
T  14165 tgaacttttattcaaaggtaaacaattgtcactattaaattccaagaacaagagatgattgaatatgtttgctagc------taaatagtttacaactac 14072  T
Q  151 tttagccccaataaatacatcaatagaatgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    || || ||||| | |||||||| |||||||||||||||||||  ||||| | ||||| |||||||    
T  14071 ttaagtcccaagatatacatcagtagaatgttccacaagaaactatgggttttaggttagaaata 14007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 240 - 461
Target Start/End: Complemental strand, 1211 - 982
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaa-actcatgtctcctccaaggcattgttctaagcgtaaac 338  Q
    |||||||| |||||||||| |||| ||| ||||| |||||||||||||||| |  || ||| |||  ||||||| |||| || ||||| | |||||| ||    
T  1211 aagcaaaaggcataaacatcagcatcattaacaacatttaacatatgacaatacaattaaagacttttgtctcccccaacgctttgttttcagcgtacac 1112  T
Q  339 taatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg--------ctccaacctttttcttgctcctgtg 430  Q
    ||||||||| |||||| ||||  |||||| | ||||||||||||||||||| | |||||||||||||         ||| | ||||||||||||| |||     
T  1111 taatcacaatttcaagtatttcacatgaatctattcaacccaacaacaagtttcaagtgagtgtgtgtgtgtgtagtcc-agctttttcttgctcttgtt 1013  T
Q  431 taagagatattatgagaaaacaggttctaac 461  Q
    |||||||||||||||| || |||||||||||    
T  1012 taagagatattatgaggaatcaggttctaac 982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1208 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1208
Description:

Target: scaffold1208; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 29 - 108
Target Start/End: Original strand, 1943 - 2022
Alignment:
Q  29 aagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  1943 aagtaaataacatgaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 2022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 18765 - 18842
Alignment:
Q  31 gtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||    
T  18765 gtaaataacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcccttattatttcaaagaacaaaagatga 18842  T

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Target: scaffold0075 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 19523 - 19443
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||| |||||||||||||| |||||| ||||||||||||||    
T  19523 aaagtaaataacaagaaagtaaaggtgaacttttgttcaaagaaccaattgtcacttattatttccgagaacaaaagatga 19443  T

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Target: scaffold0026 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 13814 - 13734
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||    
T  13814 aaagtaaataacaagaaagtaaagttgaacttttattcaaataaacaattgtcactttttatttccgagaacaaaagatga 13734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 27462 - 27380
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  27462 aaagtaaatgaaaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgatt 27380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 28 - 110
Target Start/End: Complemental strand, 39458 - 39376
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||    
T  39458 aaagtaaatgaaaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatgatt 39376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 6496 - 6431
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  6496 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 6431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 11110 - 11045
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  11110 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 11045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 9105 - 9040
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||    
T  9105 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaacaaaagatga 9040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 21699 - 21776
Alignment:
Q  31 gtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  21699 gtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 21776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 31 - 108
Target Start/End: Original strand, 26846 - 26923
Alignment:
Q  31 gtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  26846 gtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 26923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 9821 - 9885
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatg 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  9821 aaaataaagatgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatg 9885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 53; Significance: 3e-21; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 48487 - 48407
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||| |||||   |||||||||||||    
T  48487 aaagtaaatgacaagaaagtaaaggtgaacttttattcaaagaaacaattgtcacttattatttcagggaacaaaagatga 48407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 72700 - 72773
Alignment:
Q  332 cgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||| |||||||||||||||| | |||  |  |||||| ||||||||||||||||| |||| ||||||||||||    
T  72700 cgtacactaatcacaacttcatgtattccttgtgaacctattcaacccaacaacaaatcttgagtgagtgtgtg 72773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 84890 - 84963
Alignment:
Q  332 cgtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||| |||||||||||||||| | |||  |  |||||| ||||||||||||||||| |||| ||||||||||||    
T  84890 cgtacactaatcacaacttcatgtattccttgtgaacctattcaacccaacaacaaatcttgagtgagtgtgtg 84963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 52; Significance: 1e-20; HSPs: 5)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 23332 - 23277
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  23332 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaagatga 23277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 100447 - 100380
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    ||||||||| ||||||||||||||||||||||||| |||||||| |||||  ||||||||||||||||    
T  100447 aaaataaaggtgaacttttattcaaagaaacaattatcacttattatttcagagaacaaaagatgatt 100380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 254 - 199
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  254 tgaaattttattcaaagaaacaattgtcacttaatatttccaagaacaaaagatga 199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 77906 - 77851
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||||||||  ||||||||||| ||||||||| |||||||| ||||||||||||    
T  77906 tgaacttttatataaagaaacaatggtcacttattatttccaataacaaaagatga 77851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 22659 - 22619
Alignment:
Q  364 tgaaccaattcaacccaacaacaagtcttaagtgagtgtgt 404  Q
    |||||| |||||||||||||| |||||| ||||||||||||    
T  22659 tgaacctattcaacccaacaataagtctcaagtgagtgtgt 22619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 5e-20; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 240 - 446
Target Start/End: Complemental strand, 172279 - 172066
Alignment:
Q  240 aagcaaaatgcataaacattagcaacataaacaagatttaacatatgacaacattatcaaaa-ctcatgtctcctccaaggcattgttctaagcgtaaac 338  Q
    |||||||| |||||||||| |||| |||||||| |||||| |||||||||| |  || |||| || |||| ||||| ||||| |  ||  ||| ||| |     
T  172279 aagcaaaaggcataaacat-agcagcataaacacgattta-catatgacaataaaattaaaaacttatgtatcctctaaggcttcatttcaagtgtacat 172182  T
Q  339 taatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg--------ctccaacctttttcttgctcctgtg 430  Q
    |||||| |||||||||||||  | ||||||| ||||||||||||||||| ||| |||||||||||||         |||| || ||||||||||||||||    
T  172181 taatcataacttcaagcattccttatgaacctattcaacccaacaacaactctcaagtgagtgtgtgtgtgtgtagtccagcccttttcttgctcctgtg 172082  T
Q  431 taagagatattatgag 446  Q
    ||||||||||||||||    
T  172081 taagagatattatgag 172066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 163927 - 163992
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  163927 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcacagaacaaaagatga 163992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 33 - 221
Target Start/End: Complemental strand, 172821 - 172633
Alignment:
Q  33 aaataacaagaaaataaagatgaacttttattcaaagaaa-caattgtcacttataatttccaagaacaaaagatgattcaatatgtttgctagctgct- 130  Q
    ||||||||||||| ||||||   ||||||||| | ||||| |||||||||||  | | ||||||||||||||||||| |   | || ||||||||| ||     
T  172821 aaataacaagaaagtaaaga---acttttattaagagaaaacaattgtcactattgaattccaagaacaaaagatgaattgttgtgattgctagctactc 172725  T
Q  131 tatttatagcctataactactttagccccaataaatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaatagactaa 221  Q
    |||||||||  || ||  |||| |||||||| ||||| |||| |||||||||||| |||||| || |||| | ||||||| ||||| |||||    
T  172724 tatttatagtttacaatgacttaagccccaagaaatatatcactagaatgttccagaagaaaccacgggcttttaggtcataaataaactaa 172633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 337 - 440
Target Start/End: Complemental strand, 161926 - 161817
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtgc------tccaacctttttcttgctcctgtg 430  Q
    ||||||||||| |||||| |||  |  |||||| ||||||||||||||||||||| |||| ||||||||       ||||||| |||||||||||||||     
T  161926 actaatcacaatttcaagtattccttgtgaacctattcaacccaacaacaagtctcaagtaagtgtgtgtgtgtagtccaacccttttcttgctcctgta 161827  T
Q  431 taagagatat 440  Q
    ||||| ||||    
T  161826 taagacatat 161817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 9102 - 9167
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  9102 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 9167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 17657 - 17722
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||    
T  17657 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttccgagaaccaaagatga 17722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 48868 - 48803
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||||||||||||    
T  48868 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaagatga 48803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 9235 - 9285
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaa 103  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9235 tgaacttttattcaaagaaacaattgtcacttattatttccaagaacaaaa 9285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 164 - 215
Target Start/End: Original strand, 9293 - 9345
Alignment:
Q  164 aatacatcaatagaatgttccacaagaaatcatgggc-tctaggtcagaaata 215  Q
    ||||||||| ||||||||||||||||||| || |||| | |||||||||||||    
T  9293 aatacatcactagaatgttccacaagaaaccacgggcttttaggtcagaaata 9345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 8877 - 8935
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||  |||||||    
T  8877 aaaataaagatgaacttttattcaaagaaacaattgtcacttattatttcatagaacaa 8935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 53 - 107
Target Start/End: Original strand, 8878 - 8932
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatg 107  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  8878 tgaacttttattcaaagaaacaattgtcacttattatttccacgaacaaaagatg 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 9005 - 9041
Alignment:
Q  179 tgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  9005 tgttgcacaagaaaccatgggctctaggtcagaaata 9041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 43 - 108
Target Start/End: Original strand, 18956 - 19021
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  ||||| ||||||||    
T  18956 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaactaaagatga 19021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 61937 - 61857
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    ||||||||| |||||||| ||||| | || ||||||||||||||||||||||||||||| |||||  |||| |||||||||    
T  61937 aaagtaaatgacaagaaagtaaaggtcaatttttattcaaagaaacaattgtcacttattatttcagagaagaaaagatga 61857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 34032 - 33972
Alignment:
Q  43 aaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaa 103  Q
    ||||||||| |||||||||||||||||||||||||||||||||| |||||  |||||||||    
T  34032 aaaataaaggtgaacttttattcaaagaaacaattgtcacttattatttcagagaacaaaa 33972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 22288 - 22405
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtg 430  Q
    |||||||||||||||||| ||| ||  | |||  |||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||     
T  22288 actaatcacaacttcaagtattctttgtaaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgta 22387  T
Q  431 taag--agatattatgag 446  Q
    ||||  ||||||||||||    
T  22388 taagatagatattatgag 22405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 337 - 446
Target Start/End: Original strand, 50639 - 50756
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtg 430  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||||||||||||||       ||||||| |||||||||||||||     
T  50639 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgta 50738  T
Q  431 taag--agatattatgag 446  Q
    ||||  ||||||||||||    
T  50739 taagatagatattatgag 50756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 21726 - 21658
Alignment:
Q  43 aaaataaagatgaacttttattcaaag-aaacaattgtcacttataatttccaagaacaaaagatgatt 110  Q
    |||||||||||||||||||||| |||| ||||||||||||||  ||| ||| |||||||||||||||||    
T  21726 aaaataaagatgaacttttattaaaagaaaacaattgtcactattaaattcaaagaacaaaagatgatt 21658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 108
Target Start/End: Original strand, 37948 - 38028
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||| |||| |||||||| ||||| ||||||||| || ||||||||||||||||||||| ||| |  ||||||||||||||    
T  37948 aaagaaaatgacaagaaagtaaaggtgaacttttgtttaaagaaacaattgtcacttattattacagagaacaaaagatga 38028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 42167 - 42099
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  |||||  |||||||||||||||||||||||||||||||||||    
T  42167 actaatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagtcttaagtgagtgtgtg 42099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0916 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 108
Target Start/End: Complemental strand, 3580 - 3525
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatga 108  Q
    |||||| ||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  3580 tgaactattattcaaagagacaattgtcacttattatttccaagaagaaaagatga 3525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 446
Target Start/End: Complemental strand, 841 - 722
Alignment:
Q  333 gtaaactaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg----ctccaacctttttcttgctcctg 428  Q
    |||||||||||||||||||||| |||  |  |||||  ||||||| ||| |||||||||||||||||||||||     || |||| ||||||||||||||    
T  841 gtaaactaatcacaacttcaagtattccttgtgaacttattcaactcaaaaacaagtcttaagtgagtgtgtgtgtagtcgaacccttttcttgctcctg 742  T
Q  429 tgtaag--agatattatgag 446  Q
    | ||||  ||||||||||||    
T  741 tataagatagatattatgag 722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 53 - 107
Target Start/End: Complemental strand, 49958 - 49904
Alignment:
Q  53 tgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatg 107  Q
    |||| ||||| |||||| |||||||||||||||| ||||||||||||||||||||    
T  49958 tgaatttttactcaaaggaacaattgtcacttattatttccaagaacaaaagatg 49904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 215
Target Start/End: Complemental strand, 49830 - 49794
Alignment:
Q  179 tgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  49830 tgttgcacaagaaaccatgggctctaggtcagaaata 49794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0512 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 405
Target Start/End: Complemental strand, 5162 - 5094
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||||| |||  |  |||||| |||||||||||||| |||||| |||||||||||||    
T  5162 actaatcacaacttcaagtattccttgtgaacctattcaacccaacaataagtctcaagtgagtgtgtg 5094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 371 - 461
Target Start/End: Original strand, 25625 - 25724
Alignment:
Q  371 attcaacccaacaacaagtcttaagtgagtgtgtg--------ctccaacctttttcttgctcctgtgtaag--agatattatgagaaaacaggttctaa 460  Q
    |||||||||||||||||||||||||||||||||||         ||||||| ||||||||||||||| ||||  ||||||||||||  ||||||||||||    
T  25625 attcaacccaacaacaagtcttaagtgagtgtgtgtgtatgtagtccaacccttttcttgctcctgtataagatagatattatgag-gaacaggttctaa 25723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 106
Target Start/End: Complemental strand, 31745 - 31666
Alignment:
Q  28 aaagtaaataacaagaaaataaag-atgaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagat 106  Q
    |||||||||||||||||||||||| | ||||||||||| ||| | |||||||| |||  | | |||||||||||||||||    
T  31745 aaagtaaataacaagaaaataaagaaagaacttttattaaaaaagacaattgttactacttaattccaagaacaaaagat 31666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 446
Target Start/End: Complemental strand, 30569 - 30452
Alignment:
Q  337 actaatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtg 430  Q
    |||||||||||||||||||||| ||  | |||   |||||||||||||||| |||||||||||||| ||       ||||||| |||||||||||||||     
T  30569 actaatcacaacttcaagcattctttgtaaactttttcaacccaacaacaaatcttaagtgagtgtttgtgtttagtccaacccttttcttgctcctgta 30470  T
Q  431 taag--agatattatgag 446  Q
    ||||  ||||||||||||    
T  30469 taagatagatattatgag 30452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 407 - 460
Target Start/End: Original strand, 13216 - 13271
Alignment:
Q  407 tccaacctttttcttgctcctgtgtaaga--gatattatgagaaaacaggttctaa 460  Q
    ||||||| ||||||||||||||| |||||  ||||||||||| |||||||||||||    
T  13216 tccaacccttttcttgctcctgtataagatagatattatgaggaaacaggttctaa 13271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 440
Target Start/End: Complemental strand, 12632 - 12550
Alignment:
Q  364 tgaaccaattcaacccaacaacaagtcttaagtgagtgtgtg------ctccaacctttttcttgctcctgtgtaagagatat 440  Q
    |||||| ||||||| ||||||||||||| |||||||||||||       ||||||| ||||||||||||||| ||||| ||||    
T  12632 tgaacctattcaactcaacaacaagtctcaagtgagtgtgtgtgtgtagtccaacccttttcttgctcctgtataagacatat 12550  T

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Target: scaffold0264 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 71
Target Start/End: Original strand, 22425 - 22468
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttattcaaagaa 71  Q
    |||||||||||||| ||||||||| ||||||||||||| |||||    
T  22425 aaagtaaataacaataaaataaaggtgaacttttattccaagaa 22468  T

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Target: scaffold0264; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 22551 - 22587
Alignment:
Q  179 tgttccacaagaaatcatgggctctaggtcagaaata 215  Q
    |||| ||||||||||||||| ||||||||||||||||    
T  22551 tgttgcacaagaaatcatggactctaggtcagaaata 22587  T

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Target: scaffold0089 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 402
Target Start/End: Original strand, 54986 - 55049
Alignment:
Q  339 taatcacaacttcaagcatttttcatgaaccaattcaacccaacaacaagtcttaagtgagtgt 402  Q
    |||||||||||||||| |||  |  |||||  ||||||||||||||||||| ||||||||||||    
T  54986 taatcacaacttcaagtattccttgtgaacttattcaacccaacaacaagttttaagtgagtgt 55049  T

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Target: scaffold0566 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0566
Description:

Target: scaffold0566; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 405
Target Start/End: Complemental strand, 2650 - 2616
Alignment:
Q  371 attcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    |||||||||||||||| ||||||||||||||||||    
T  2650 attcaacccaacaacatgtcttaagtgagtgtgtg 2616  T

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Target: scaffold0116 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 371 - 405
Target Start/End: Original strand, 37911 - 37945
Alignment:
Q  371 attcaacccaacaacaagtcttaagtgagtgtgtg 405  Q
    ||||||||||||| |||||||||||||||||||||    
T  37911 attcaacccaacatcaagtcttaagtgagtgtgtg 37945  T

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Target: scaffold0059 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 460
Target Start/End: Complemental strand, 12439 - 12386
Alignment:
Q  409 caacctttttcttgctcctgtgtaaga--gatattatgagaaaacaggttctaa 460  Q
    ||||| ||||||||||||||| |||||  ||||||||||| |||||||||||||    
T  12439 caacccttttcttgctcctgtataagatagatattatgaggaaacaggttctaa 12386  T

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Target: scaffold0013 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 409 - 460
Target Start/End: Original strand, 232959 - 233012
Alignment:
Q  409 caacctttttcttgctcctgtgtaaga--gatattatgagaaaacaggttctaa 460  Q
    ||||| ||||||||||||||| |||||  ||||||||||| |||||||||||||    
T  232959 caacccttttcttgctcctgtataagatagatattatgaggaaacaggttctaa 233012  T

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Target: scaffold0673 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0673
Description:

Target: scaffold0673; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 3215 - 3251
Alignment:
Q  28 aaagtaaataacaagaaaataaagatgaacttttatt 64  Q
    |||||||||||||||||| |||||||||| |||||||    
T  3215 aaagtaaataacaagaaagtaaagatgaatttttatt 3251  T

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Target: scaffold0231 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 21413 - 21330
Alignment:
Q  28 aaagtaaataacaagaaaataaagat-gaacttttattcaaagaaacaattgtcacttataatttccaagaacaaaagatgattc 111  Q
    |||||||||||||||||| ||||||  ||||||||||| | | | |||||||||| |  | | ||||||||||||||||||||||    
T  21413 aaagtaaataacaagaaa-taaagaaagaacttttattaagaaagacaattgtcattattgaattccaagaacaaaagatgattc 21330  T

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