View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4457-Insertion-1 (Length: 1027)

Name: NF4457-Insertion-1
Description: NF4457
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4457-Insertion-1
NF4457-Insertion-1
[»] chr5 (39 HSPs)
chr5 (312-591)||(6314030-6314309)
chr5 (775-934)||(26205695-26205856)
chr5 (765-912)||(21137642-21137789)
chr5 (775-933)||(21190998-21191152)
chr5 (811-924)||(43554520-43554634)
chr5 (775-934)||(21522713-21522879)
chr5 (775-934)||(21533279-21533445)
chr5 (812-934)||(2419857-2419985)
chr5 (804-934)||(28588615-28588741)
chr5 (775-861)||(42469184-42469270)
chr5 (775-923)||(15382440-15382592)
chr5 (775-854)||(6326314-6326393)
chr5 (792-932)||(18586232-18586367)
chr5 (775-853)||(13287417-13287495)
chr5 (810-863)||(18607105-18607158)
chr5 (812-924)||(21577055-21577167)
chr5 (885-934)||(38464314-38464363)
chr5 (775-863)||(16203803-16203891)
chr5 (823-933)||(30502330-30502436)
chr5 (823-933)||(30542673-30542779)
chr5 (792-933)||(43001780-43001922)
chr5 (775-934)||(21541993-21542159)
chr5 (779-864)||(19293430-19293515)
chr5 (823-930)||(21194068-21194171)
chr5 (777-854)||(22013379-22013456)
chr5 (782-854)||(24906318-24906390)
chr5 (887-934)||(14873593-14873640)
chr5 (773-852)||(19552562-19552641)
chr5 (887-934)||(19820329-19820376)
chr5 (783-899)||(25863175-25863293)
chr5 (797-934)||(42893345-42893478)
chr5 (797-863)||(3966488-3966554)
chr5 (864-934)||(7677765-7677834)
chr5 (787-865)||(15410454-15410532)
chr5 (885-923)||(39342511-39342549)
chr5 (775-816)||(6401461-6401502)
chr5 (887-924)||(17088362-17088399)
chr5 (798-863)||(18288059-18288124)
chr5 (823-864)||(21194212-21194253)
[»] chr4 (40 HSPs)
chr4 (775-934)||(24343470-24343631)
chr4 (341-591)||(56537739-56537989)
chr4 (787-934)||(7012041-7012196)
chr4 (768-931)||(21945459-21945618)
chr4 (799-931)||(20743210-20743350)
chr4 (775-934)||(23292927-23293082)
chr4 (779-919)||(20521801-20521941)
chr4 (775-934)||(11931243-11931409)
chr4 (813-934)||(3144588-3144710)
chr4 (842-934)||(53381531-53381625)
chr4 (869-934)||(17876219-17876284)
chr4 (769-859)||(16402223-16402313)
chr4 (794-926)||(32910533-32910673)
chr4 (797-934)||(40783942-40784071)
chr4 (775-934)||(36635287-36635448)
chr4 (812-934)||(18513176-18513300)
chr4 (818-934)||(19230242-19230362)
chr4 (793-934)||(3947702-3947844)
chr4 (864-934)||(30982808-30982877)
chr4 (775-912)||(944625-944761)
chr4 (864-934)||(10133757-10133827)
chr4 (823-934)||(28964189-28964296)
chr4 (775-934)||(35157926-35158081)
chr4 (768-930)||(49430982-49431140)
chr4 (823-911)||(31243500-31243596)
chr4 (880-934)||(715546-715600)
chr4 (880-934)||(752872-752926)
chr4 (892-934)||(25950473-25950515)
chr4 (823-865)||(46180942-46180984)
chr4 (893-934)||(848039-848080)
chr4 (779-934)||(5414102-5414264)
chr4 (336-427)||(7671023-7671114)
chr4 (887-934)||(19482750-19482797)
chr4 (887-933)||(7424729-7424774)
chr4 (864-934)||(16073443-16073512)
chr4 (880-934)||(29205532-29205586)
chr4 (793-863)||(34515882-34515952)
chr4 (864-933)||(4157198-4157266)
chr4 (864-933)||(4157485-4157553)
chr4 (793-854)||(44796979-44797040)
[»] chr6 (40 HSPs)
chr6 (812-934)||(34446565-34446689)
chr6 (767-934)||(34595089-34595252)
chr6 (812-932)||(12235462-12235578)
chr6 (775-863)||(6389706-6389794)
chr6 (775-934)||(8776909-8777069)
chr6 (773-863)||(2153895-2153985)
chr6 (775-934)||(9107300-9107466)
chr6 (787-934)||(9658854-9658998)
chr6 (785-933)||(12696297-12696446)
chr6 (775-934)||(16766660-16766826)
chr6 (773-934)||(17168398-17168561)
chr6 (864-932)||(32978842-32978909)
chr6 (779-934)||(10339055-10339218)
chr6 (887-934)||(31959221-31959268)
chr6 (864-934)||(18367896-18367965)
chr6 (777-863)||(30866152-30866238)
chr6 (768-854)||(34073364-34073450)
chr6 (828-934)||(4420121-4420222)
chr6 (775-860)||(7625085-7625170)
chr6 (887-932)||(8389411-8389456)
chr6 (775-863)||(9027141-9027229)
chr6 (792-934)||(28152079-28152216)
chr6 (792-937)||(17841527-17841668)
chr6 (839-935)||(24807066-24807163)
chr6 (887-934)||(31385001-31385048)
chr6 (788-854)||(7996395-7996461)
chr6 (788-854)||(8022340-8022406)
chr6 (864-934)||(32313464-32313534)
chr6 (775-882)||(7938079-7938183)
chr6 (775-934)||(7977771-7977926)
chr6 (798-863)||(12086353-12086418)
chr6 (813-865)||(7569174-7569226)
chr6 (775-863)||(13851699-13851787)
chr6 (775-854)||(426531-426610)
chr6 (775-854)||(5000643-5000722)
chr6 (775-854)||(21395325-21395403)
chr6 (830-934)||(12236676-12236777)
chr6 (815-934)||(26247429-26247549)
chr6 (887-932)||(9025448-9025493)
chr6 (813-866)||(19602186-19602239)
[»] chr3 (50 HSPs)
chr3 (775-933)||(24204983-24205137)
chr3 (804-934)||(25074781-25074913)
chr3 (768-923)||(25651977-25652134)
chr3 (792-939)||(37077338-37077493)
chr3 (813-929)||(12704597-12704715)
chr3 (811-934)||(52369774-52369905)
chr3 (779-934)||(16789586-16789742)
chr3 (813-922)||(21211289-21211400)
chr3 (832-934)||(40993276-40993374)
chr3 (823-934)||(3730109-3730213)
chr3 (803-934)||(15864824-15864950)
chr3 (776-933)||(28917965-28918120)
chr3 (777-934)||(55401040-55401193)
chr3 (775-934)||(15999951-16000112)
chr3 (775-934)||(7171465-7171619)
chr3 (803-934)||(8903423-8903553)
chr3 (777-854)||(8587038-8587115)
chr3 (810-936)||(8789487-8789611)
chr3 (823-934)||(20503476-20503583)
chr3 (832-934)||(21861589-21861693)
chr3 (792-865)||(25948893-25948966)
chr3 (882-934)||(8039284-8039336)
chr3 (775-863)||(8383220-8383308)
chr3 (840-932)||(12100297-12100385)
chr3 (775-854)||(15796311-15796390)
chr3 (823-933)||(29508455-29508567)
chr3 (887-934)||(34185053-34185100)
chr3 (775-879)||(34307770-34307876)
chr3 (864-934)||(2408591-2408661)
chr3 (792-920)||(10954932-10955056)
chr3 (779-865)||(16192756-16192842)
chr3 (775-934)||(27903596-27903756)
chr3 (880-934)||(49651717-49651771)
chr3 (823-934)||(51512118-51512231)
chr3 (874-934)||(5407200-5407260)
chr3 (887-934)||(1389909-1389956)
chr3 (804-863)||(1830335-1830394)
chr3 (887-934)||(3163972-3164019)
chr3 (777-852)||(4466619-4466694)
chr3 (775-854)||(4990984-4991063)
chr3 (818-879)||(20691325-20691383)
chr3 (887-934)||(27505322-27505369)
chr3 (887-934)||(40052383-40052430)
chr3 (775-853)||(3164043-3164121)
chr3 (887-933)||(4987222-4987268)
chr3 (774-816)||(10335341-10335383)
chr3 (864-934)||(14209173-14209242)
chr3 (792-854)||(21720744-21720806)
chr3 (773-863)||(25093463-25093553)
chr3 (888-934)||(51206294-51206340)
[»] chr7 (37 HSPs)
chr7 (769-930)||(43249950-43250118)
chr7 (810-934)||(7133213-7133339)
chr7 (811-909)||(23930218-23930318)
chr7 (765-934)||(4017730-4017900)
chr7 (817-912)||(5938477-5938574)
chr7 (803-922)||(38804502-38804623)
chr7 (775-934)||(598171-598326)
chr7 (813-924)||(12278836-12278943)
chr7 (775-934)||(21880117-21880270)
chr7 (777-854)||(27945006-27945083)
chr7 (887-936)||(32287402-32287451)
chr7 (796-897)||(17780056-17780159)
chr7 (777-934)||(24339607-24339771)
chr7 (797-934)||(32308105-32308249)
chr7 (887-934)||(9778576-9778623)
chr7 (823-934)||(1401036-1401141)
chr7 (793-933)||(22868023-22868164)
chr7 (778-934)||(43027405-43027562)
chr7 (775-934)||(5409772-5409932)
chr7 (768-863)||(18233606-18233703)
chr7 (811-934)||(23751899-23752017)
chr7 (864-922)||(33994261-33994318)
chr7 (891-932)||(8842282-8842323)
chr7 (780-923)||(26733272-26733411)
chr7 (776-848)||(11722121-11722193)
chr7 (810-936)||(20549789-20549911)
chr7 (887-934)||(6490787-6490834)
chr7 (887-934)||(17852071-17852118)
chr7 (776-847)||(19206014-19206085)
chr7 (864-934)||(7438766-7438835)
chr7 (768-802)||(10230134-10230168)
chr7 (785-863)||(15902795-15902873)
chr7 (823-865)||(17307904-17307946)
chr7 (875-933)||(28943351-28943409)
chr7 (885-931)||(40287306-40287352)
chr7 (864-933)||(26033392-26033460)
chr7 (812-853)||(41360910-41360951)
[»] chr8 (45 HSPs)
chr8 (775-916)||(14513127-14513270)
chr8 (775-934)||(39820392-39820546)
chr8 (777-934)||(31556962-31557114)
chr8 (779-934)||(29510234-29510396)
chr8 (810-934)||(13009423-13009554)
chr8 (775-933)||(44067479-44067644)
chr8 (780-863)||(28883886-28883969)
chr8 (812-934)||(30067969-30068087)
chr8 (811-933)||(1676711-1676829)
chr8 (810-934)||(40063949-40064080)
chr8 (797-936)||(3658132-3658273)
chr8 (779-854)||(37283827-37283902)
chr8 (864-934)||(17751704-17751774)
chr8 (864-934)||(17760691-17760761)
chr8 (775-934)||(22651939-22652105)
chr8 (777-863)||(24362210-24362296)
chr8 (774-933)||(926730-926885)
chr8 (831-934)||(2035758-2035866)
chr8 (798-933)||(20679337-20679468)
chr8 (882-934)||(13397617-13397669)
chr8 (792-934)||(36450695-36450833)
chr8 (810-934)||(35431081-35431201)
chr8 (875-934)||(38487158-38487217)
chr8 (880-934)||(4673355-4673409)
chr8 (892-934)||(34127173-34127215)
chr8 (823-933)||(3025562-3025668)
chr8 (882-934)||(13403172-13403224)
chr8 (779-847)||(13436988-13437056)
chr8 (864-912)||(14659658-14659706)
chr8 (823-913)||(18646183-18646270)
chr8 (818-865)||(3508058-3508105)
chr8 (887-934)||(8798794-8798841)
chr8 (891-934)||(13436911-13436954)
chr8 (864-934)||(3951477-3951546)
chr8 (880-934)||(6065587-6065641)
chr8 (775-934)||(24413500-24413656)
chr8 (864-934)||(34450962-34451031)
chr8 (777-854)||(4673442-4673519)
chr8 (788-845)||(10497842-10497899)
chr8 (823-934)||(14134710-14134817)
chr8 (889-934)||(15816059-15816104)
chr8 (893-934)||(16641910-16641951)
chr8 (785-854)||(20873042-20873111)
chr8 (774-807)||(26609815-26609848)
chr8 (774-863)||(28385002-28385091)
[»] chr2 (41 HSPs)
chr2 (775-934)||(11307935-11308099)
chr2 (774-934)||(23354582-23354749)
chr2 (777-933)||(23354926-23355089)
chr2 (785-934)||(18840954-18841099)
chr2 (818-934)||(34006931-34007044)
chr2 (766-866)||(12748644-12748738)
chr2 (828-934)||(18889520-18889634)
chr2 (780-933)||(2438661-2438808)
chr2 (768-854)||(30404867-30404952)
chr2 (794-875)||(25544465-25544546)
chr2 (864-934)||(37419803-37419872)
chr2 (775-934)||(15972836-15972991)
chr2 (809-923)||(24011033-24011149)
chr2 (787-863)||(21616737-21616813)
chr2 (775-854)||(18276484-18276563)
chr2 (803-862)||(19573969-19574028)
chr2 (809-863)||(10535767-10535821)
chr2 (887-933)||(19942336-19942382)
chr2 (785-863)||(23717999-23718077)
chr2 (785-863)||(24105671-24105749)
chr2 (864-934)||(37497169-37497239)
chr2 (887-933)||(42832234-42832280)
chr2 (773-854)||(4332887-4332968)
chr2 (887-924)||(21624333-21624370)
chr2 (886-934)||(18622672-18622720)
chr2 (864-936)||(28596518-28596589)
chr2 (768-892)||(896169-896288)
chr2 (823-916)||(5367203-5367292)
chr2 (793-863)||(6249182-6249250)
chr2 (811-866)||(30563408-30563463)
chr2 (775-854)||(31284011-31284090)
chr2 (887-934)||(38117100-38117147)
chr2 (887-934)||(44860402-44860449)
chr2 (868-934)||(6180791-6180857)
chr2 (826-856)||(11439809-11439839)
chr2 (887-933)||(15657946-15657992)
chr2 (780-854)||(21782835-21782909)
chr2 (785-863)||(23406841-23406919)
chr2 (864-934)||(24009344-24009413)
chr2 (885-934)||(19980744-19980793)
chr2 (893-930)||(27460111-27460148)
[»] chr1 (45 HSPs)
chr1 (813-934)||(6936335-6936458)
chr1 (780-934)||(20157285-20157441)
chr1 (810-934)||(40747708-40747834)
chr1 (812-896)||(42004920-42005006)
chr1 (776-934)||(2896062-2896216)
chr1 (775-934)||(22794019-22794174)
chr1 (798-934)||(17831463-17831604)
chr1 (775-936)||(10577674-10577831)
chr1 (864-934)||(32899939-32900009)
chr1 (818-924)||(351029-351137)
chr1 (778-863)||(398773-398858)
chr1 (823-934)||(40258874-40258981)
chr1 (775-933)||(1486646-1486805)
chr1 (785-930)||(5898211-5898352)
chr1 (774-853)||(15641048-15641127)
chr1 (887-934)||(1704936-1704983)
chr1 (813-905)||(24176325-24176425)
chr1 (798-934)||(36878447-36878584)
chr1 (768-934)||(40917707-40917878)
chr1 (775-933)||(42359391-42359545)
chr1 (812-933)||(11412709-11412827)
chr1 (784-854)||(5376517-5376587)
chr1 (864-934)||(9828104-9828173)
chr1 (892-934)||(27965941-27965983)
chr1 (798-934)||(38075910-38076043)
chr1 (795-934)||(1815240-1815375)
chr1 (823-922)||(18190061-18190156)
chr1 (786-854)||(25452165-25452233)
chr1 (775-863)||(38503283-38503371)
chr1 (792-934)||(46348324-46348462)
chr1 (887-934)||(113364-113411)
chr1 (775-854)||(6612188-6612267)
chr1 (887-934)||(10233327-10233374)
chr1 (775-854)||(15323126-15323205)
chr1 (863-934)||(15765805-15765876)
chr1 (792-863)||(30847728-30847799)
chr1 (892-934)||(7918155-7918197)
chr1 (887-933)||(16297223-16297269)
chr1 (864-934)||(32461394-32461463)
chr1 (885-934)||(5944363-5944412)
chr1 (777-854)||(10572606-10572683)
chr1 (788-857)||(16812519-16812588)
chr1 (810-863)||(39101190-39101243)
chr1 (777-826)||(48040507-48040556)
chr1 (785-854)||(48450604-48450673)
[»] scaffold0652 (1 HSPs)
scaffold0652 (775-934)||(403-558)
[»] scaffold0007 (1 HSPs)
scaffold0007 (775-933)||(225199-225364)
[»] scaffold0306 (1 HSPs)
scaffold0306 (777-933)||(13365-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (777-933)||(21804-21962)
[»] scaffold0003 (2 HSPs)
scaffold0003 (768-934)||(241550-241723)
scaffold0003 (869-934)||(236915-236980)
[»] scaffold0103 (1 HSPs)
scaffold0103 (792-934)||(51791-51941)
[»] scaffold0598 (1 HSPs)
scaffold0598 (792-861)||(8063-8132)
[»] scaffold0199 (1 HSPs)
scaffold0199 (811-933)||(1948-2066)
[»] scaffold0053 (1 HSPs)
scaffold0053 (775-934)||(8761-8916)
[»] scaffold0223 (1 HSPs)
scaffold0223 (777-854)||(20137-20214)
[»] scaffold0168 (1 HSPs)
scaffold0168 (774-843)||(21005-21074)
[»] scaffold0050 (1 HSPs)
scaffold0050 (793-932)||(70259-70394)
[»] scaffold0027 (1 HSPs)
scaffold0027 (775-854)||(46645-46724)
[»] scaffold0021 (1 HSPs)
scaffold0021 (775-854)||(130445-130524)
[»] scaffold0793 (1 HSPs)
scaffold0793 (880-934)||(4822-4876)
[»] scaffold0136 (1 HSPs)
scaffold0136 (787-934)||(3779-3933)
[»] scaffold0008 (1 HSPs)
scaffold0008 (775-933)||(263303-263468)
[»] scaffold0380 (1 HSPs)
scaffold0380 (887-934)||(8672-8719)
[»] scaffold0128 (1 HSPs)
scaffold0128 (887-934)||(32775-32822)
[»] scaffold0022 (1 HSPs)
scaffold0022 (798-865)||(99879-99946)
[»] scaffold0004 (1 HSPs)
scaffold0004 (795-854)||(92790-92849)
[»] scaffold0116 (1 HSPs)
scaffold0116 (775-816)||(9861-9902)


Alignment Details
Target: chr5 (Bit Score: 132; Significance: 5e-68; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 5e-68
Query Start/End: Original strand, 312 - 591
Target Start/End: Original strand, 6314030 - 6314309
Alignment:
Q  312 agaagaagaatcttagggtgcttgtagcaggtggtggaattggtggattggtttttgctttggctgcaaagagaaaaggatttgaagtgatggtgtttga 411  Q
    |||||||| | |||| ||| ||||| || ||||| || |||||||| |||||||||||||||||||| ||||| ||||| ||||| ||  |||| |||||    
T  6314030 agaagaagcagcttaaggtacttgtggctggtggagggattggtgggttggtttttgctttggctgctaagaggaaagggtttgaggtagtggtttttga 6314129  T
Q  412 gaaagatttgagtgctgtgagaggagagggacaatatagaggtcctattcagatacagagtaatgctttggctgctttggaagctattgattcagatgtt 511  Q
    ||| |||||||||||| | ||||| |||||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||| || |||    |||||    
T  6314130 gaaggatttgagtgctataagaggggagggacagtatagaggtccaattcagatacaaagcaatgctttggctgctttggaagcaatagatatgaatgtt 6314229  T
Q  512 gctgatgaagttatgagagttggttgtattactggtgatagaattaatggccttgttgatggagtttctggttcttggta 591  Q
    |||||||||||||||||||||||||| || || ||||||||||| ||||| ||||| |||||||||||||| ||||||||    
T  6314230 gctgatgaagttatgagagttggttgcatcacaggtgatagaatcaatgggcttgtggatggagtttctgggtcttggta 6314309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 26205856 - 26205695
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 872  Q
    ||||||||||||||||||||| |||||| |||| | ||| || ||||  | | ||||||||| ||||||||||||||||||||||||||  ||| |||||    
T  26205856 acacggacaccggacatgacatggacactgacacgtcgataccgataaaattttgagaaaatgacataattcagtgtaatcataggtgtcgtgttggtgt 26205757  T
Q  873 cagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    | |||||| |||| | |||||||||||||||||| ||||||||   |||||| |||||||||    
T  26205756 cggacaccaacgcgtatccgacaccgggacacacgtaatccaaaaggtgtccgtgcttcata 26205695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 765 - 912
Target Start/End: Original strand, 21137642 - 21137789
Alignment:
Q  765 aagctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgtt 864  Q
    |||||||||| |||||||||||||||  |||||||||| |||| |||||||  | || |||| ||||||||| || |||||||||| ||||||||||||     
T  21137642 aagctatgaagcacggacaccggacacaacacggacactgacacgccgacatcggtaataatctgagaaaatgacgtaattcagtgaaatcataggtgtc 21137741  T
Q  865 gtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatc 912  Q
    ||    ||| |||||| |||| ||||||||||||||||||||||||||    
T  21137742 gtgtcggtcggacaccaacgcgtgtccgacaccgggacacacctaatc 21137789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 775 - 933
Target Start/End: Complemental strand, 21191152 - 21190998
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||| ||||||||||| ||||||||||| ||||||||||||| | || |||| ||| ||||| ||||||||||||||||| | | |   ||||||||||     
T  21191152 acactgacaccggacacgacacggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaag---tgtcggtgtcg 21191056  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |||| | || | |||||||| ||||||||| |||||||| |||||||||| ||||||||    
T  21191055 gaca-caacacgtgtccgactccgggacacgcctaatccgaggagtgtccgtgcttcat 21190998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 811 - 924
Target Start/End: Original strand, 43554520 - 43554634
Alignment:
Q  811 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacct 908  Q
    ||||||| ||| |||| ||||||||| | |||||| |||||||||||||||||  |||||||||| ||||||||||| ||||||||| |||||||| |||    
T  43554520 cgacacgtataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcggacaccgacgcgtgtccgaca-cgggacacgcct 43554618  T
Q  909 aatccaaggagtgtcc 924  Q
    ||||| || |||||||    
T  43554619 aatccgagaagtgtcc 43554634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 21522713 - 21522879
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatca------taggtgt--tgt 866  Q
    |||||| ||||||||| ||||||||||| |||| |||||||| | || |||| | | ||||||||||||||||||||||| |      | |||||  |||    
T  21522713 acacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgt 21522812  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| |||| |||| | |||||| ||||||||||| |||||||||| |||||||| ||| |||||    
T  21522813 cggtgtcggaca-cgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21522879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 21533279 - 21533445
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatca------taggtgt--tgt 866  Q
    |||||| ||||||||| ||||||||||| |||| |||||||| | || |||| | | ||||||||||||||||||||||| |      | |||||  |||    
T  21533279 acacggtcaccggacacgacacggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgt 21533378  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| |||| |||| | |||||| ||||||||||| |||||||||| |||||||| ||| |||||    
T  21533379 cggtgtcggaca-cgacacgtgtccggcaccgggacacgcctaatccaaagagtgtccgtgcatcata 21533445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 812 - 934
Target Start/End: Original strand, 2419857 - 2419985
Alignment:
Q  812 gacacggatattaatatgagaaaataacataattcagtgtaatcataggt--gt----tgtcggtgtcagacaccgacgcatgtccgacaccgggacaca 905  Q
    ||||| |||| |||| ||||||||| ||| ||||||||||||||||  ||  ||    ||| ||||||||||||||| || |||||||| ||||||||||    
T  2419857 gacactgataataatttgagaaaattacacaattcagtgtaatcatgtgtcagtgccgtgttggtgtcagacaccgatgcgtgtccgaccccgggacaca 2419956  T
Q  906 cctaatccaaggagtgtccatgcttcata 934  Q
    |||||||| | |||||||| |||||||||    
T  2419957 cctaatccgatgagtgtccgtgcttcata 2419985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 804 - 934
Target Start/End: Complemental strand, 28588741 - 28588615
Alignment:
Q  804 gacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggaca 903  Q
    |||| |||||||| | || |||| ||||||||| ||||||||||||||||| |||||   |||||||||| |||| |||| ||| || |||||| |||||    
T  28588741 gacacgccgacaccggtaataatttgagaaaatcacataattcagtgtaattatagg---tgtcggtgtcggaca-cgacacatatctgacaccaggaca 28588646  T
Q  904 cacctaatccaaggagtgtccatgcttcata 934  Q
    | | |||||| | ||||||||||||||||||    
T  28588645 cgcttaatccgaagagtgtccatgcttcata 28588615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 775 - 861
Target Start/End: Original strand, 42469184 - 42469270
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggt 861  Q
    |||||||||||| ||| |||||||| |  |||| ||||||||||||| |||| ||||||||| ||||| || |||||||||||||||    
T  42469184 acacggacaccgaacacgacacggataatgacacgccgacacggataataatttgagaaaatgacatattttagtgtaatcataggt 42469270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 775 - 923
Target Start/End: Original strand, 15382440 - 15382592
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacata--attcagtgtaatcataggtgt---tgtcgg 869  Q
    |||||||||||||||| ||||||||||  |||| |||||||| | || |||| ||| |||| | ||||  ||||||| |||| | | ||||   ||||||    
T  15382440 acacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaaaatcatataattcagtataattacaagtgtcggtgtcgg 15382539  T
Q  870 tgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtc 923  Q
    |||  ||||| ||| |||||||||||||||||||| |||||||| |||||||||    
T  15382540 tgttggacac-gacacatgtccgacaccgggacacgcctaatccgaggagtgtc 15382592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 775 - 854
Target Start/End: Complemental strand, 6326393 - 6326314
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||| |||||||| ||||||||||| |||| |||||||  | || |||| ||||||||| |||||||||||||||||    
T  6326393 acacggataccggacacgacacggacactgacacgccgacatcgctagtaatttgagaaaattacataattcagtgtaat 6326314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 792 - 932
Target Start/End: Complemental strand, 18586367 - 18586232
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 891  Q
    ||||| ||||| |||||| ||| ||||||| |||| ||| ||||| ||||||| ||||||||| |||||||| ||    ||| || || |||||||||||    
T  18586367 gacactgacactgacatgtcgatacggataataatttga-aaaatgacataatacagtgtaattataggtgtcgt----gtccgagactgacgcatgtcc 18586273  T
Q  892 gacaccgggacacacctaatccaaggagtgtccatgcttca 932  Q
    ||| | || ||||||||||| | |||||||||| |||||||    
T  18586272 gactctggaacacacctaattcgaggagtgtccgtgcttca 18586232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 775 - 853
Target Start/End: Complemental strand, 13287495 - 13287417
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaa 853  Q
    |||||||||||||||| |||||||||||  ||| | |||||| |||| |||| ||| ||||| ||||||||||||||||    
T  13287495 acacggacaccggacacgacacggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaa 13287417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 810 - 863
Target Start/End: Complemental strand, 18607158 - 18607105
Alignment:
Q  810 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||| ||||| |||| |||||||||||||||||||| |||||||||||||||    
T  18607158 ccgacatggataataatttgagaaaataacataattcaatgtaatcataggtgt 18607105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 812 - 924
Target Start/End: Complemental strand, 21577167 - 21577055
Alignment:
Q  812 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtg-ttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 910  Q
    ||||| |||| |||| |||||||||||||||||| |||||||| |||||||  |||  ||||||||||||||||| ||| || || | ||||||||| ||    
T  21577167 gacaccgataataatttgagaaaataacataattaagtgtaataataggtgagtgt-tgtgtcagacaccgacgcgtgtacggcatcaggacacaccaaa 21577069  T
Q  911 tccaaggagtgtcc 924  Q
    ||| || |||||||    
T  21577068 tccgagtagtgtcc 21577055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 885 - 934
Target Start/End: Complemental strand, 38464363 - 38464314
Alignment:
Q  885 catgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  38464363 catgtccgacaccgggacacacctaatccgaggagtgtctgtgcttcata 38464314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 775 - 863
Target Start/End: Complemental strand, 16203891 - 16203803
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||| ||||||| |||||||||||||||  |||||||||||| | || |||| |||||||||  ||||||| |||||||| ||| ||||    
T  16203891 acacagacaccgaacatgacacggacactaacatgccgacactgctaataatttgagaaaatctcataatttagtgtaattatatgtgt 16203803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 823 - 933
Target Start/End: Complemental strand, 30502436 - 30502330
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||||||||| || |||||||||||||| ||| ||||   ||||||| ||||| ||| |||||||||||| ||||||  ||||||||||||| |||    
T  30502436 taatttgagaaaatcacttaattcagtgtaattatatgtgt---cggtgtcggacac-gacacatgtccgacactgggacatgcctaatccaaggattgt 30502341  T
Q  923 ccatgcttcat 933  Q
     | ||||||||    
T  30502340 tcgtgcttcat 30502330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 823 - 933
Target Start/End: Complemental strand, 30542779 - 30542673
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||||||||| || |||||||||||||| ||| ||||   ||||||| ||||| ||| |||||||||||| ||||||  ||||||||||||| |||    
T  30542779 taatttgagaaaatcacttaattcagtgtaattatatgtgt---cggtgtcggacac-gacacatgtccgacactgggacatgcctaatccaaggattgt 30542684  T
Q  923 ccatgcttcat 933  Q
     | ||||||||    
T  30542683 tcgtgcttcat 30542673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 792 - 933
Target Start/End: Original strand, 43001780 - 43001922
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcg--gtgtcagacaccgacgcatgt 889  Q
    ||||||||||| |||||| |||||| | || |||| ||| ||||| ||||||||||||||||| | | ||||||  |  ||||| |||| |||| | |||    
T  43001780 gacacggacactgacatgtcgacactgctaataatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgtcggaca-cgacacgtgt 43001878  T
Q  890 ccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |  ||||| |||||| |||||||| |||||||||| ||||||||    
T  43001879 caaacacctggacacgcctaatccgaggagtgtccgtgcttcat 43001922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 21541993 - 21542159
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 866  Q
    ||||||||||| |||| ||||| ||||  |||||||||||||   || |||| | | || |||||||||||||||||||| | | ||||        |||    
T  21541993 acacggacaccagacacgacacagacattgacatgccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgt 21542092  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| ||||| ||| | |||||||||||||||||| || |||||||||| ||||| ||| |||||    
T  21542093 cggtgtcggacac-gacacgtgtccgacaccgggacacgccgaatccaaggaatgtccgtgcatcata 21542159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 864
Target Start/End: Complemental strand, 19293515 - 19293430
Alignment:
Q  779 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgtt 864  Q
    ||||||| |||| ||||| |||||| ||| || |||||  ||| |||| | |||||||||||||||| |||||||||||| |||||    
T  19293515 ggacaccagacacgacacagacaccaacacgctgacaccaataataatttaagaaaataacataattaagtgtaatcatatgtgtt 19293430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 823 - 930
Target Start/End: Complemental strand, 21194171 - 21194068
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||||||||| |||| |||||||||||| |||||| ||   |||||  |||| |||| |||||| ||||||||| ||| |||||||| ||||||||    
T  21194171 taatttgagaaaatcacatcattcagtgtaattataggtatt---ggtgttggaca-cgacacatgtcagacaccggggcacgcctaatccgaggagtgt 21194076  T
Q  923 ccatgctt 930  Q
    || |||||    
T  21194075 ccgtgctt 21194068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 777 - 854
Target Start/End: Original strand, 22013379 - 22013456
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||||| ||||||||||| |||| |||||||| | || |||| ||  ||||| |||||||| ||||||||    
T  22013379 acggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaattacataatttagtgtaat 22013456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 782 - 854
Target Start/End: Complemental strand, 24906390 - 24906318
Alignment:
Q  782 caccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||||| |||||| |||| |||| ||| |||| |||| |||| ||| ||||| |||||||||||||||||    
T  24906390 caccggacacgacacgaacactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaat 24906318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 14873593 - 14873640
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||| |||||||||||| |||||||| |||||||||| |||||||||    
T  14873593 tgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcata 14873640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 773 - 852
Target Start/End: Complemental strand, 19552641 - 19552562
Alignment:
Q  773 aaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgta 852  Q
    |||||||| ||||| ||| ||||||||||| |||| |||||||| | || |||| ||| ||||| |||||||| ||||||    
T  19552641 aaacacggccaccgaacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaagtgta 19552562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Complemental strand, 19820376 - 19820329
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||||| |||||||  |||||||||| |||||||||    
T  19820376 tgtccgacaccgggacacgcctaatcagaggagtgtccgtgcttcata 19820329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 783 - 899
Target Start/End: Original strand, 25863175 - 25863293
Alignment:
Q  783 accggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacacc 880  Q
    |||||||| ||||| |||| ||||| | ||||| | ||| |||| ||||||||| | ||||||||||||||| ||| ||||  |||| ||||| | ||||    
T  25863175 accggacacgacacagacatcgacacgtcgacatgtataataatttgagaaaatgatataattcagtgtaattataagtgtcgtgtcagtgtcgggcacc 25863274  T
Q  881 gacgcatgtccgacaccgg 899  Q
    || || |||| ||||||||    
T  25863275 gatgcgtgtctgacaccgg 25863293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 797 - 934
Target Start/End: Original strand, 42893345 - 42893478
Alignment:
Q  797 ggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacac 896  Q
    |||||| ||||  ||||||| | || |||| ||| ||||| ||||||| ||||||||| | | ||||   |||||||||||||  || | ||||||||||    
T  42893345 ggacacggacacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgt---cggtgtcagacaca-acacgtgtccgacac 42893440  T
Q  897 cgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    | |||||| ||||||   ||||||||||||||||||||    
T  42893441 caggacacgcctaatatgaggagtgtccatgcttcata 42893478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 797 - 863
Target Start/End: Original strand, 3966488 - 3966554
Alignment:
Q  797 ggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||| ||||||||||||| | || |||| ||||||||| ||| ||||||||||||| ||| ||||    
T  3966488 ggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgt 3966554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 7677765 - 7677834
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| ||||| | | |||||||||||||||||||| |||||||| ||||| |||  |||||||||    
T  7677765 tgtcggtgtctgacac-gtcacatgtccgacaccgggacacgcctaatccgaggagagtcggtgcttcata 7677834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 787 - 865
Target Start/End: Complemental strand, 15410532 - 15410454
Alignment:
Q  787 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 865  Q
    |||| ||||||||||| |||| |||||||| | || |||| | ||||||| | || |||||||||||||||| ||||||    
T  15410532 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttg 15410454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 885 - 923
Target Start/End: Original strand, 39342511 - 39342549
Alignment:
Q  885 catgtccgacaccgggacacacctaatccaaggagtgtc 923  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  39342511 catgtcagacaccgggacacgcctaatccaaggagtgtc 39342549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 775 - 816
Target Start/End: Original strand, 6401461 - 6401502
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacac 816  Q
    |||||||||||||||  |||||||||||||||| ||||||||    
T  6401461 acacggacaccggacgcgacacggacaccgacacgccgacac 6401502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 887 - 924
Target Start/End: Original strand, 17088362 - 17088399
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtcc 924  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  17088362 tgtccgacaccgggacacgcctaatccgaggagtgtcc 17088399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 798 - 863
Target Start/End: Complemental strand, 18288124 - 18288059
Alignment:
Q  798 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||| | || |||||||||| |||| ||||||||| || ||| ||||| |||||||||||||    
T  18288124 gacaccgagacgctgacacggataataatttgagaaaatgacttaactcagtataatcataggtgt 18288059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 823 - 864
Target Start/End: Complemental strand, 21194253 - 21194212
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgtt 864  Q
    |||| ||||||||| |||||||||||||||||||| ||||||    
T  21194253 taatttgagaaaatcacataattcagtgtaatcattggtgtt 21194212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 6e-46; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 24343470 - 24343631
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 872  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||||| |||| ||||||||| ||||||||||||||||| ||||||||  |||||||||    
T  24343470 acacggacaccggacacgacacggacgccgacacgccgacacggataataatttgagaaaattacataattcagtgtaattataggtgtcgtgtcggtgt 24343569  T
Q  873 cagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    | ||||||||||| |||||||||||||||||| |||| ||  |||||||||| |||||||||    
T  24343570 ccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcata 24343631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 341 - 591
Target Start/End: Original strand, 56537739 - 56537989
Alignment:
Q  341 ggtggtggaattggtggattggtttttgctttggctgcaaagagaaaaggatttgaagtgatggtgtttgagaaagatttgagtgctgtgagaggagagg 440  Q
    ||||| || |||| ||| |||||||||||||||||||| ||||| ||||  ||||| ||  |||| |||||||| ||||||| |||| | ||||| ||||    
T  56537739 ggtggagggattgctggcttggtttttgctttggctgctaagaggaaagagtttgaggtagtggtttttgagaaggatttgattgctataagaggggagg 56537838  T
Q  441 gacaatatagaggtcctattcagatacagagtaatgctttggctgctttggaagctattgattcagatgttgctgatgaagttatgagagttggttgtat 540  Q
    |||| ||||||||||| ||||||||||| |  ||||||||||||||||||||||| || |||   ||||||||||| ||||||||  |||||||||| ||    
T  56537839 gacagtatagaggtccaattcagatacaaatcaatgctttggctgctttggaagcaatagatatggatgttgctgaagaagttattggagttggttgcat 56537938  T
Q  541 tactggtgatagaattaatggccttgttgatggagtttctggttcttggta 591  Q
     || ||||||||||| || || ||||| || ||||||||||| ||||||||    
T  56537939 cacaggtgatagaatcaaagggcttgtggacggagtttctgggtcttggta 56537989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 787 - 934
Target Start/End: Original strand, 7012041 - 7012196
Alignment:
Q  787 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagaca 878  Q
    |||| |||||||||||||||| |||||||| |||| |||| ||||||||| |||||||||||||| ||||||||| |        |||||||||| ||||    
T  7012041 gacaggacacggacaccgacacgccgacaccgataataatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcggtgtcggaca 7012140  T
Q  879 ccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| | ||||||||||||  ||||||||| | |||||||||| |||||||||    
T  7012141 ccgacgcgtatccgacaccggggaacacctaatgcgaggagtgtccgtgcttcata 7012196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 768 - 931
Target Start/End: Original strand, 21945459 - 21945618
Alignment:
Q  768 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtc 867  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||| | || |||| ||| ||||| ||||||||||||||||| | | |   ||||    
T  21945459 ctatgaagcacggacaccggacatgacacagacactgacatgccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaag---tgtc 21945555  T
Q  868 ggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttc 931  Q
    |||||| ||||  ||| ||||||||||||||  |||| |||||||| ||||||||| |||||||    
T  21945556 ggtgtcggaca-tgacacatgtccgacaccgcaacacgcctaatccgaggagtgtctatgcttc 21945618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 799 - 931
Target Start/End: Complemental strand, 20743350 - 20743210
Alignment:
Q  799 acaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtc 890  Q
    |||| |||| ||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||        ||||| |||||||||||||| | ||||    
T  20743350 acactgacacgccgacacggataataatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcgatgtcagacaccgacacgtgtc 20743251  T
Q  891 cgacaccgggacacacctaatccaaggagtgtccatgcttc 931  Q
    ||||||||| ||||| ||||||| | |||||||| ||||||    
T  20743250 cgacaccggaacacatctaatccgatgagtgtccgtgcttc 20743210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 23293082 - 23292927
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||||||||||||||| ||||||||||  |||| |||||||| | || |||| ||| ||||| |||||||||||| |||| | | |   ||||||||||     
T  23293082 acacggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaag---tgtcggtgtcg 23292986  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||| | |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  23292985 gaca-cgacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 23292927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 779 - 919
Target Start/End: Complemental strand, 20521941 - 20521801
Alignment:
Q  779 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagaca 878  Q
    ||||||| |||| ||||||||||| |||| ||||| || |||| |||| ||| ||||| |||||||||| || ||||||  ||  |||||||||| ||||    
T  20521941 ggacaccagacacgacacggacactgacacgccgataccgataataatttgataaaatcacataattcaatgaaatcatgtgtcgtgtcggtgtcggaca 20521842  T
Q  879 ccgacgcatgtccgacaccgggacacacctaatccaaggag 919  Q
    ||||||||||||||| |||  ||||| ||||||||||||||    
T  20521841 ccgacgcatgtccgaaaccatgacacgcctaatccaaggag 20521801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 11931243 - 11931409
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 866  Q
    |||||||||| |||||  |||||||||  | ||||||||||| | || |||||||| ||||| |||||||| |||||||  ||| ||||        |||    
T  11931243 acacggacactggacactacacggacaatgccatgccgacaccgttaataatatgaaaaaatcacataatttagtgtaaatatatgtgtcgatgtcatgt 11931342  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| || ||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||    
T  11931343 cggtatc-gacaccgacgcatgtccgacaccaggacacacctaatccatggagtgtccgtgcttcata 11931409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 813 - 934
Target Start/End: Complemental strand, 3144710 - 3144588
Alignment:
Q  813 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 910  Q
    ||||||||| |||| | ||||||| | |||||| |||||||||||||||||  ||||||||||||||||| |||| ||||| ||| || |||||||||||    
T  3144710 acacggataataatttcagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtgtcagacaccaacgcgtgtccaaca-cgagacacacctaa 3144612  T
Q  911 tccaaggagtgtccatgcttcata 934  Q
    ||| || ||||||| |||||||||    
T  3144611 tccgagaagtgtccgtgcttcata 3144588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 842 - 934
Target Start/End: Complemental strand, 53381625 - 53381531
Alignment:
Q  842 aattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||| ||||| ||  |||||||||| ||||| ||||| | ||||||||||||||||||||||||| |||||||||| |||||||||    
T  53381625 aattcagtgtaattataggcgtcgtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 53381531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 869 - 934
Target Start/End: Original strand, 17876219 - 17876284
Alignment:
Q  869 gtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  |||||||||    
T  17876219 gtgtcagacaccgacgcttgtccgacaccaggacacacctaatccaaggagtgtctgtgcttcata 17876284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 769 - 859
Target Start/End: Complemental strand, 16402313 - 16402223
Alignment:
Q  769 tatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcatag 859  Q
    |||||| ||||||||||| ||| |||| | |||| |||||||||||||||||| |||| |||||||||||||| || ||||||||| ||||    
T  16402313 tatgaagcacggacaccgcacacgacatgaacactgacatgccgacacggataataatttgagaaaataacatgatacagtgtaattatag 16402223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 794 - 926
Target Start/End: Original strand, 32910533 - 32910673
Alignment:
Q  794 cacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtc------agacaccgacgc 885  Q
    |||| |||||||||| |||||||||||| |||| ||||||||| ||||||||||||||||| || |||||  ||||||| ||       ||||| |||||    
T  32910533 cacgaacaccgacataccgacacggataataatttgagaaaatgacataattcagtgtaattatgggtgttatgtcggtatcggtattggacactgacgc 32910632  T
Q  886 atgtccgacaccgggacacacctaatccaaggagtgtccat 926  Q
     |||||||||||  ||||| |||||||| ||||||||||||    
T  32910633 gtgtccgacaccatgacacgcctaatccgaggagtgtccat 32910673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 797 - 934
Target Start/End: Original strand, 40783942 - 40784071
Alignment:
Q  797 ggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacac 896  Q
    ||||||||||||| |||| | |||| |||| ||||| ||||||||||||||| ||||||||| |||||   |||||| || ||| |||  |||  |||||    
T  40783942 ggacaccgacatgtcgacgccgataataatttgagataataacataattcagcgtaatcatatgtgtt---ggtgtc-gataccaacg--tgt--gacac 40784033  T
Q  897 cgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  40784034 cgggacacacctaatccgaggagtgtccgtgcttcata 40784071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 36635287 - 36635448
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgtt---gtcggtg 871  Q
    |||| ||||||||||| ||| ||||||| |||| ||| ||||   || |||| ||||||||| ||||||||||||||||| ||| |||||   ||  |||    
T  36635287 acacagacaccggacacgactcggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaattatatgtgttcgtgtgagtg 36635386  T
Q  872 tcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||| ||| |  ||| ||||||||||||| |||||||| | |||||||| |||||||||    
T  36635387 tcagacac-gacacgcgtcagacaccgggacacgcctaatccgaagagtgtccgtgcttcata 36635448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 812 - 934
Target Start/End: Complemental strand, 18513300 - 18513176
Alignment:
Q  812 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacct 908  Q
    ||||| |||| |||| ||||||||| |||||||||| |||||||||| ||||   ||| | |||| ||||||||||  ||||||||||| |||||| |||    
T  18513300 gacaccgataataatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttg-tgtcggacaccgacgtgtgtccgacaccaggacacgcct 18513202  T
Q  909 aatccaaggagtgtccatgcttcata 934  Q
    ||||  |||||||||| |||||||||    
T  18513201 aatctgaggagtgtccgtgcttcata 18513176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 818 - 934
Target Start/End: Complemental strand, 19230362 - 19230242
Alignment:
Q  818 gatattaatatgagaaaataacataattcagtgtaatcataggtgt----tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatcc 913  Q
    |||| |||| |||||||||||||||||||| |||||| ||||||||    |||||||||||||||| || || ||| ||||| | ||||||| |||||||    
T  19230362 gataataatttgagaaaataacataattcaatgtaattataggtgtcgtgtgtcggtgtcagacacggatgcgtgttcgacaacaggacacatctaatcc 19230263  T
Q  914 aaggagtgtccatgcttcata 934  Q
     | |||||||| | |||||||    
T  19230262 gaagagtgtccgtacttcata 19230242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 793 - 934
Target Start/End: Complemental strand, 3947844 - 3947702
Alignment:
Q  793 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcagacaccgacgcatgt 889  Q
    |||| ||||| ||||||||||||| | || |||| ||| |||||  |||||||||||||||| | | ||||   ||||| |||| ||||| ||| | |||    
T  3947844 acacagacacggacatgccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcg-tgtcggacac-gacacgtgt 3947747  T
Q  890 ccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||    
T  3947746 ccgacaccaggacacacctaatccgaggagtgtccgtgcttcata 3947702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 864 - 934
Target Start/End: Complemental strand, 30982877 - 30982808
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||| ||| | |||||||||||||||||| |||||||||| |||||||| |||||||||    
T  30982877 tgtcggtgtcagacac-gacacgtgtccgacaccgggacacgcctaatccaaagagtgtccgtgcttcata 30982808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 775 - 912
Target Start/End: Complemental strand, 944761 - 944625
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 872  Q
    |||| ||| ||||||| |||||  ||||||||| |||||||| ||||   || ||||| ||| ||  |||| |||||||| ||||||||  |||| ||||    
T  944761 acacagacgccggacacgacacaaacaccgacacgccgacaccgata---atttgagataatgacgcaatttagtgtaattataggtgtcgtgtcagtgt 944665  T
Q  873 cagacaccgacgcatgtccgacaccgggacacacctaatc 912  Q
    |  |||| ||||| ||||||||||||||||||||||||||    
T  944664 cgaacacagacgcgtgtccgacaccgggacacacctaatc 944625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 10133757 - 10133827
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||| ||||| ||||||||||| ||||||||||||||  ||||  || |||||||||||    
T  10133757 tgtcggtgtcagacactgacgcgtgtccgacaccaggacacacctaatctgaggaacgttcatgcttcata 10133827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 823 - 934
Target Start/End: Complemental strand, 28964296 - 28964189
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||| ||||| ||||||||||||||||| | | ||||   | ||||| ||||| ||| ||| |||||||| ||||||| |||||||| ||||||||    
T  28964296 taatttgaaaaaatcacataattcagtgtaattacaagtgt---ctgtgtcggacac-gacacatatccgacactgggacacgcctaatccgaggagtgt 28964201  T
Q  923 ccatgcttcata 934  Q
    ||||||||||||    
T  28964200 ccatgcttcata 28964189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 35158081 - 35157926
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    ||||||||||||||||  |||||||||| |||| |||||| |   || |||| ||  ||||| |||||||| |||||||| ||| |   ||||||||||     
T  35158081 acacggacaccggacacaacacggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataag---tgtcggtgtct 35157985  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||| ||||||| ||||||| |||| | |||||| || ||||||| |||||||||    
T  35157984 gaca-cgacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcata 35157926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 768 - 930
Target Start/End: Original strand, 49430982 - 49431140
Alignment:
Q  768 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaa-taacataattcagtgtaatcataggtgttgt 866  Q
    ||||||| ||||||||| ||||| ||| ||||||  |||| |||||||| | || |||| ||| |||| | ||||||||||||||||| | | |   |||    
T  49430982 ctatgaagcacggacac-ggacacgactcggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaag---tgt 49431077  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgctt 930  Q
    ||||||| |||| |||| | ||||| |||||||||||| ||| |||| ||||||||||||||||    
T  49431078 cggtgtcggaca-cgacacgtgtccaacaccgggacacgccttatccgaggagtgtccatgctt 49431140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 823 - 911
Target Start/End: Complemental strand, 31243596 - 31243500
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaat 911  Q
    |||| ||||||||| ||||||||||||||||||||||||||        ||| |||||| |||||||| || ||| ||||||| |||||||||||||    
T  31243596 taatttgagaaaatgacataattcagtgtaatcataggtgtcatgtcggtgttggtgtcggacaccgatgcgtgttcgacaccaggacacacctaat 31243500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 880 - 934
Target Start/End: Complemental strand, 715600 - 715546
Alignment:
Q  880 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  715600 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 715546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 880 - 934
Target Start/End: Complemental strand, 752926 - 752872
Alignment:
Q  880 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  752926 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 752872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 892 - 934
Target Start/End: Complemental strand, 25950515 - 25950473
Alignment:
Q  892 gacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| |||||||||||||| ||||||||||||||||||||    
T  25950515 gacaccgagacacacctaatccgaggagtgtccatgcttcata 25950473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 823 - 865
Target Start/End: Complemental strand, 46180984 - 46180942
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttg 865  Q
    |||| ||||||||||||||||||||||||||||||| ||||||    
T  46180984 taatttgagaaaataacataattcagtgtaatcatatgtgttg 46180942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 893 - 934
Target Start/End: Original strand, 848039 - 848080
Alignment:
Q  893 acaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  848039 acaccgggacacacctaatccaaggagtgtccgtgtttcata 848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 779 - 934
Target Start/End: Complemental strand, 5414264 - 5414102
Alignment:
Q  779 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcata------ggtgt--tgtcggt 870  Q
    |||||||||||| ||||||||||| |||| |||||||| | || |  | | ||||||| ||| ||| ||||||||| |||      |||||  |||| ||    
T  5414264 ggacaccggacacgacacggacacggacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagt 5414165  T
Q  871 gtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||| ||||| ||| | |||| ||||| ||||||||||| ||||||||||||||| |||||||||    
T  5414164 gtcggacac-gacacgtgtctgacacagggacacaccttatccaaggagtgtccgtgcttcata 5414102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 427
Target Start/End: Complemental strand, 7671114 - 7671023
Alignment:
Q  336 tagcaggtggtggaattggtggattggtttttgctttggctgcaaagagaaaaggatttgaagtgatggtgtttgagaaagatttgagtgct 427  Q
    |||| |||||||||||||||||| | ||||| |||||||||||||||   | ||| | ||||||||  || ||||| || ||||||||||||    
T  7671114 tagctggtggtggaattggtggacttgttttggctttggctgcaaagcatagaggttatgaagtgaaagtatttgaaaaggatttgagtgct 7671023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 19482750 - 19482797
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| |||||||||||||||| |||||||| | |||||||||    
T  19482750 tgtccgacactgggacacacctaatccgaggagtgttcgtgcttcata 19482797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 887 - 933
Target Start/End: Original strand, 7424729 - 7424774
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    ||||||||||||  |||| ||||||||||||||||||||||||||||    
T  7424729 tgtccgacaccgt-acacgcctaatccaaggagtgtccatgcttcat 7424774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 16073443 - 16073512
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| ||||| ||  ||||||||||||   ||||| |||||||| ||||||||||||||||||||    
T  16073443 tgtcggtgtcggacac-gatacatgtccgacactaagacacgcctaatccgaggagtgtccatgcttcata 16073512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 880 - 934
Target Start/End: Original strand, 29205532 - 29205586
Alignment:
Q  880 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||||||||||| ||||||| |||||||| |||||||| | |||||||||    
T  29205532 cgacacatgtccgacactgggacacgcctaatccgaggagtgttcgtgcttcata 29205586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 793 - 863
Target Start/End: Complemental strand, 34515952 - 34515882
Alignment:
Q  793 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    ||||| |||| |||| | ||||||||||| ||||   ||||||| |||||||||||||||| |||||||||    
T  34515952 acacgaacactgacacgtcgacacggataataattcaagaaaatgacataattcagtgtaaacataggtgt 34515882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 864 - 933
Target Start/End: Original strand, 4157198 - 4157266
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |||||||||| ||||| ||| |||||||||||||| || ||||||||| | |||||||||  ||||||||    
T  4157198 tgtcggtgtcggacac-gacacatgtccgacaccgagaaacacctaattcgaggagtgtctgtgcttcat 4157266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 864 - 933
Target Start/End: Original strand, 4157485 - 4157553
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |||||||||| ||||| ||| |||||||||||||| || || |||||| | ||||||||| |||||||||    
T  4157485 tgtcggtgtcggacac-gacacatgtccgacaccgagaaacgcctaattcgaggagtgtctatgcttcat 4157553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 793 - 854
Target Start/End: Complemental strand, 44797040 - 44796979
Alignment:
Q  793 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||| |||||| | |||| || | |||| |||||||||||||||||||| ||||||    
T  44797040 acacggacacagacatgtcaacaccgacaataatttgagaaaataacataattcaatgtaat 44796979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 74; Significance: 2e-33; HSPs: 40)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 812 - 934
Target Start/End: Original strand, 34446565 - 34446689
Alignment:
Q  812 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacaccta 909  Q
    |||||||||| |||| ||||||||| ||||||||||||||||||||||||||  ||||||||||  |||||||||| | || ||||| ||||||||||||    
T  34446565 gacacggataataatttgagaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgtccaacaccgacgcgtatctgacactgggacacaccta 34446664  T
Q  910 atccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||| |||||||||    
T  34446665 atccaaggagtgtccgtgcttcata 34446689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 767 - 934
Target Start/End: Original strand, 34595089 - 34595252
Alignment:
Q  767 gctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt 866  Q
    |||||||| ||||||||||||||| ||||||||||  |||| ||||||||   || |||| ||| ||||| ||||||||||||||||| | | |   |||    
T  34595089 gctatgaagcacggacaccggacacgacacggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaag---tgt 34595185  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| |||| |||| | |||| |||||||||||||||||||||| |||||||||| |||||||||    
T  34595186 cggtgtcggaca-cgacacgtgtctgacaccgggacacacctaatccgaggagtgtccgtgcttcata 34595252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 812 - 932
Target Start/End: Complemental strand, 12235578 - 12235462
Alignment:
Q  812 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaat 911  Q
    |||||||||| ||||  |||||||| ||||||||||||||||||||||||||     ||||| ||||||||||  |||||| ||||||||||| ||||||    
T  12235578 gacacggataataattagagaaaatgacataattcagtgtaatcataggtgt----cgtgtccgacaccgacgtgtgtccggcaccgggacacccctaat 12235483  T
Q  912 ccaaggagtgtccatgcttca 932  Q
    ||||  ||||||| |||||||    
T  12235482 ccaaaaagtgtccgtgcttca 12235462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 775 - 863
Target Start/End: Original strand, 6389706 - 6389794
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||| ||||||||||| |||||||||||  ||| ||||||||||||| |||| ||||||||| | |||||| |||||||||||||||||    
T  6389706 acacagacaccggacacgacacggacactcacacgccgacacggataataatttgagaaaatgatataatttagtgtaatcataggtgt 6389794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 8777069 - 8776909
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    ||||||||| |||||| ||||||||||| |||| ||||||||   || |||| ||| ||||| ||| ||||||||||||| | | ||||||   |||||     
T  8777069 acacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttg---gtgtcg 8776973  T
Q  875 gacac----cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||    |||| | |||||||||||| |||||||||||||| |||||||||| |||||||||    
T  8776972 gacacgacacgacacgtgtccgacaccgagacacacctaatccgaggagtgtccgtgcttcata 8776909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 773 - 863
Target Start/End: Complemental strand, 2153985 - 2153895
Alignment:
Q  773 aaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| | | |||| | ||||||| | |||||| |||||||| ||||||||    
T  2153985 aaacacggacatcggacatgacacggacaccgacacgccgacacgaacaataatttaagaaaatgatataatttagtgtaattataggtgt 2153895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 9107466 - 9107300
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 866  Q
    |||||||||||||||| |||||||||||  ||| |||||||| | || |||| ||| ||||| ||| ||||||||||||| | | ||||        |||    
T  9107466 acacggacaccggacacgacacggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgt 9107367  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| |||||  |||  ||||||||||||||||||||||||||| ||||||| || |||||||||    
T  9107366 cggtgtcggacaca-acgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcata 9107300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 787 - 934
Target Start/End: Original strand, 9658854 - 9658998
Alignment:
Q  787 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgca 886  Q
    |||| ||||||||||| |||| |||||||| | || |||| | ||||||| ||||||||||||||||| |||    |||||||||| ||||| |||| |     
T  9658854 gacacgacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattata---tttgtcggtgttagaca-cgacacg 9658949  T
Q  887 tgtccgacaccgggacacacctaa-tccaaggagtgtccatgcttcata 934  Q
    |||| |||||||| |||| ||||| |||||||||||||| |||||||||    
T  9658950 tgtctgacaccggaacacgcctaattccaaggagtgtccgtgcttcata 9658998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 785 - 933
Target Start/End: Original strand, 12696297 - 12696446
Alignment:
Q  785 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcagacaccg 881  Q
    |||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | ||||   |||| ||||| |||| ||    
T  12696297 cggacacgacacggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtc-gtgtcggaca-cg 12696394  T
Q  882 acgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    || | |||| ||||||||||||||||| ||||||||||||||  ||||||||    
T  12696395 acacgtgtctgacaccgggacacaccttatccaaggagtgtctgtgcttcat 12696446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 16766660 - 16766826
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 866  Q
    |||||||||||||||| |||| |||||| |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | ||||        |||    
T  16766660 acacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 16766759  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| |||| | || | |||||||||||||||||| |||||||| | || ||||| |||||||||    
T  16766760 cggtgtcggaca-caacacgtgtccgacaccgggacacgcctaatccgaagaatgtccgtgcttcata 16766826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 773 - 934
Target Start/End: Complemental strand, 17168561 - 17168398
Alignment:
Q  773 aaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggt 870  Q
    ||||||||| | |||||||||||  ||||| |||| ||| |||| |||| |||| ||||||||| | |||||| |||||||| ||||||||  |||||||    
T  17168561 aaacacggaaatcggacatgacatagacactgacacgccaacactgataataatttgagaaaatgatataatttagtgtaataataggtgtcgtgtcggt 17168462  T
Q  871 gtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||| ||||| ||| | ||||  ||||  |||||| ||||||||  ||| ||| | |||||||||    
T  17168461 gtcggacactgacacgtgtctaacactaggacacccctaatccgtggaatgtacttgcttcata 17168398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 864 - 932
Target Start/End: Complemental strand, 32978909 - 32978842
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttca 932  Q
    |||||||||| ||||| ||| ||||||||||||||||||||  |||||||||||||||||| |||||||    
T  32978909 tgtcggtgtcggacac-gacacatgtccgacaccgggacacgtctaatccaaggagtgtccgtgcttca 32978842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 779 - 934
Target Start/End: Complemental strand, 10339218 - 10339055
Alignment:
Q  779 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgt-aatcataggtgt--------tgtcgg 869  Q
    |||||| ||||| |||| | |||| |||| |||||||| |  |||||| ||||||||| |||||||||||||| ||| ||| ||||        ||||||    
T  10339218 ggacacaggacacgacatgaacactgacacgccgacaccgcgattaatttgagaaaatcacataattcagtgttaattatatgtgtcagtgccgtgtcgg 10339119  T
Q  870 tgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| ||||| ||| |||||||||||| ||||||| |||||||  |||||||||| |||||||||    
T  10339118 tgtcggacac-gacacatgtccgacactgggacacgcctaatcggaggagtgtccgtgcttcata 10339055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 31959221 - 31959268
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  31959221 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 31959268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 18367896 - 18367965
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||| ||| |||||| ||||| ||||||| ||| ||||||||||||||| |||||||||    
T  18367896 tgtcggtgtcagacac-gacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 18367965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 777 - 863
Target Start/End: Complemental strand, 30866238 - 30866152
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||||||||||||||| ||||||||||  || |||| | || |||| ||||||||| |||||||||| |||||| ||| ||||    
T  30866238 acggacaccggacatgacactgacaccgacacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 30866152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 768 - 854
Target Start/End: Complemental strand, 34073450 - 34073364
Alignment:
Q  768 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||| ||||||||| ||||| ||||||||||| |||||||| |||  | || |||| |||||||||  ||||||||||||||||    
T  34073450 ctatgaagcacggacactggacacgacacggacactgacatgccaacatcgctaataatttgagaaaatctcataattcagtgtaat 34073364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 828 - 934
Target Start/End: Complemental strand, 4420222 - 4420121
Alignment:
Q  828 tgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatg 927  Q
    ||||||||| | |||||||||||||| ||||||||||   ||||||||||||| |||  |||| |||||| ||  |||||||||   |||||||||||||    
T  4420222 tgagaaaatgatataattcagtgtaaccataggtgtt---ggtgtcagacaccaacgtgtgtctgacaccagg--acacctaatattaggagtgtccatg 4420128  T
Q  928 cttcata 934  Q
    |||||||    
T  4420127 cttcata 4420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 775 - 860
Target Start/End: Original strand, 7625085 - 7625170
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcatagg 860  Q
    ||||||||| |||||| ||||| |||||||||| | ||||||||||| |||| ||||||||| | |||||| ||| |||| |||||    
T  7625085 acacggacatcggacacgacacagacaccgacacgtcgacacggataataatttgagaaaatgatataatttagtataattatagg 7625170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 887 - 932
Target Start/End: Complemental strand, 8389456 - 8389411
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttca 932  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||    
T  8389456 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttca 8389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 775 - 863
Target Start/End: Original strand, 9027141 - 9027229
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||| ||||||| ||||||||||| |||| |||||||| | || |||| ||||| ||| ||||||||| ||||||| ||| ||||    
T  9027141 acacggactccggacacgacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgt 9027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 792 - 934
Target Start/End: Original strand, 28152079 - 28152216
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 891  Q
    ||||||||||| |||| |||||||  | || |||| ||| ||||| ||||||||||||||||| | | |   |||||||||| |||| |||| | |||||    
T  28152079 gacacggacactgacacgccgacaaagctaataatttga-aaaatcacataattcagtgtaattacaag---tgtcggtgtcggaca-cgacacgtgtcc 28152173  T
Q  892 gacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||  |||||||| |||||||| | |||||||||    
T  28152174 gacaccgggacaggcctaatccgaggagtgttcgtgcttcata 28152216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 792 - 937
Target Start/End: Complemental strand, 17841668 - 17841527
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 891  Q
    ||||||||||| |||| |||||||| | || |||| ||| ||||| |||||||| |||||||| | | |||    ||||||| ||||| |||   |||||    
T  17841668 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtga---cggtgtcggacac-gacatgtgtcc 17841573  T
Q  892 gacaccgggacacacctaatccaaggagtgtccatgcttcatactc 937  Q
    ||||| | ||||| |||||||| |||||||||| ||||||||||||    
T  17841572 gacactgagacacgcctaatccgaggagtgtccgtgcttcatactc 17841527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 839 - 935
Target Start/End: Original strand, 24807066 - 24807163
Alignment:
Q  839 cataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcatac 935  Q
    ||||||||||| |||||||||||||  |||| || ||| ||||| | ||||||||||| | ||| |||||||||||| |||||||||  ||||||||||    
T  24807066 cataattcagtctaatcataggtgtcgtgtcagtatca-acaccaatgcatgtccgacgctggggcacacctaatccgaggagtgtcagtgcttcatac 24807163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 31385001 - 31385048
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||| |||||||||||| ||||||||||||||||||| |||||||||    
T  31385001 tgtcctacaccgggacacgcctaatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 788 - 854
Target Start/End: Complemental strand, 7996461 - 7996395
Alignment:
Q  788 acatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||| |||||| ||||||||||||| | || |||| ||||||||| | |||||||||||||||    
T  7996461 acatgacaaggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaat 7996395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 788 - 854
Target Start/End: Original strand, 8022340 - 8022406
Alignment:
Q  788 acatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||| |||||| ||||||||||||| | || |||| ||||||||| | |||||||||||||||    
T  8022340 acatgacaaggacactgacatgccgacactgctaataatttgagaaaatcatataattcagtgtaat 8022406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 32313464 - 32313534
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||| |||| |||||| |||||||||||||| ||| || || | ||||| |||||||||    
T  32313464 tgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcata 32313534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 775 - 882
Target Start/End: Original strand, 7938079 - 7938183
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||||||||||||||| |||| |||||| |||| |||||||| | || |||| ||| ||||| | |||||| |||||||| ||| |   ||||||||||     
T  7938079 acacggacaccggacacgacatggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataag---tgtcggtgtcc 7938175  T
Q  875 gacaccga 882  Q
    ||||||||    
T  7938176 gacaccga 7938183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 7977926 - 7977771
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||||||||| ||||| |||| ||| || |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | |   ||||||||||     
T  7977926 acacggacactggacacgacatggatactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaag---tgtcggtgtcg 7977830  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| | ||  |||||||||| ||  |||| ||||||| ||||||||| | |||||||||    
T  7977829 gaca-caacatatgtccgacaacgaaacacgcctaatctaaggagtgttcgtgcttcata 7977771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 798 - 863
Target Start/End: Complemental strand, 12086418 - 12086353
Alignment:
Q  798 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||| ||| | ||||||||||| |||| ||||| ||| |||||||||||| |||||||||||||    
T  12086418 gacacctacacgtcgacacggataataatttgagataatgacataattcagtttaatcataggtgt 12086353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 813 - 865
Target Start/End: Complemental strand, 7569226 - 7569174
Alignment:
Q  813 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 865  Q
    |||| |||| |||| ||||||||| ||||||||||||||||| ||||||||||    
T  7569226 acacagataataatttgagaaaattacataattcagtgtaattataggtgttg 7569174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 775 - 863
Target Start/End: Original strand, 13851699 - 13851787
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||||  | ||| ||||||||||| |||| | |||||| | || |||| |||||||||||| |||||||||||||| ||| ||||    
T  13851699 acacggacattgaacacgacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 13851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 854
Target Start/End: Complemental strand, 426610 - 426531
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||| |||||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| |||||||| | ||||||    
T  426610 acacggataccggacacgacacggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaat 426531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 854
Target Start/End: Complemental strand, 5000722 - 5000643
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||||||||||||||||||||| || |||| | |||||| | || ||||  |||||||| |||| ||||||| ||||    
T  5000722 acacggacaccggacatgacacggatactgacacgtcgacaccgctaataattcgagaaaatcacatgattcagtataat 5000643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 854
Target Start/End: Complemental strand, 21395403 - 21395325
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||| ||||||||| |||||| ||||||||||| ||| |||| | || |||| ||||||||| |||||||| ||||||||    
T  21395403 acacagacaccggatatgacatggacaccgacacgccaacaccgctaataatttgagaaaat-acataatttagtgtaat 21395325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 830 - 934
Target Start/End: Original strand, 12236676 - 12236777
Alignment:
Q  830 agaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgct 929  Q
    |||||||||||||||||| ||||||| || ||||   || ||| | |||||||| ||||| || ||||||||||| ||||| |  |||||||| | ||||    
T  12236676 agaaaataacataattcaatgtaatcgtatgtgt---cgatgttaaacaccgacacatgttcggcaccgggacacgcctaacctgaggagtgttcgtgct 12236772  T
Q  930 tcata 934  Q
    |||||    
T  12236773 tcata 12236777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 815 - 934
Target Start/End: Original strand, 26247429 - 26247549
Alignment:
Q  815 acggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatc 912  Q
    ||||||| |||| | ||||||| ||||| || ||| ||||||||||| |  |||||||||| |||||| || | |||| |||||| | ||||||||||||    
T  26247429 acggataataatttaagaaaatgacatattttagtataatcataggtttcgtgtcggtgtcggacaccaacacgtgtctgacacc-gaacacacctaatc 26247527  T
Q  913 caaggagtgtccatgcttcata 934  Q
      |||||||||| || ||||||    
T  26247528 tgaggagtgtccgtgtttcata 26247549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 887 - 932
Target Start/End: Complemental strand, 9025493 - 9025448
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttca 932  Q
    |||||||||||||||||| |||||||| || ||||||| |||||||    
T  9025493 tgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttca 9025448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 813 - 866
Target Start/End: Complemental strand, 19602239 - 19602186
Alignment:
Q  813 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt 866  Q
    |||| |||| |||| ||||||||| | |||||||||||||||||||||| ||||    
T  19602239 acactgataataatttgagaaaatgatataattcagtgtaatcataggtattgt 19602186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 5e-31; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 775 - 933
Target Start/End: Complemental strand, 24205137 - 24204983
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||||||| ||||||| ||||||||| ||| ||||     |||||     
T  24205137 acacggacaccggacacgacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgt----cgtgtcg 24205042  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    ||||| ||||| ||||||||||| |||||| |||||| | |||||||||| ||||||||    
T  24205041 gacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 24204983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 804 - 934
Target Start/End: Original strand, 25074781 - 25074913
Alignment:
Q  804 gacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt--cggtgtcagacaccgacgcatgtccgacaccggga 901  Q
    |||| |||||||| |||| |||| ||||||||| |||||||| |||||||||||||| |||||  ||||||| |||||| |||| |||||||||| ||||    
T  25074781 gacacgccgacaccgataataatttgagaaaatgacataattgagtgtaatcataggcgttgtgtcggtgtctgacaccaacgcgtgtccgacactggga 25074880  T
Q  902 cacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||| |||||||| | |||||||||    
T  25074881 cacacctaatccgaggagtgttcgtgcttcata 25074913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 768 - 923
Target Start/End: Complemental strand, 25652134 - 25651977
Alignment:
Q  768 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tg 865  Q
    |||||||||||| ||||| |||| |||||||||||  ||| ||| ||||||||| |||| ||||||||| | ||||||||||||| | ||||||||  ||    
T  25652134 ctatgaaacacgaacaccagacacgacacggacactaacacgccaacacggataataatttgagaaaatgatataattcagtgtagttataggtgttgtg 25652035  T
Q  866 tcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtc 923  Q
    || ||||  ||||||||| | ||| |||||||| |||||||||||||| | |||||||    
T  25652034 tcagtgttggacaccgacacgtgttcgacaccgagacacacctaatccgaagagtgtc 25651977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 792 - 939
Target Start/End: Original strand, 37077338 - 37077493
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgac 883  Q
    ||||||||||  |||| |||||||| |||| |||| |||||| ||||||||||||| || ||||||| ||||        ||||||||||  |||| |||    
T  37077338 gacacggacagtgacacgccgacaccgataataatttgagaatataacataattcaatggaatcatatgtgtcattgtcatgtcggtgtcgtacacggac 37077437  T
Q  884 gcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcatactcaa 939  Q
    ||||||||||||| ||||||||||||||||||||| ||||| ||||||||| ||||    
T  37077438 gcatgtccgacacggggacacacctaatccaaggaatgtccgtgcttcatattcaa 37077493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 813 - 929
Target Start/End: Complemental strand, 12704715 - 12704597
Alignment:
Q  813 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 910  Q
    ||||||||| |||| ||| ||||| |||||||||| |||||||||||||||  |||||||||| |||||| |||||||||||||||| | ||||  ||||    
T  12704715 acacggataataatttgaaaaaatgacataattcaatgtaatcataggtgtcgtgtcggtgtcggacaccaacgcatgtccgacaccagaacacgtctaa 12704616  T
Q  911 tccaaggagtgtccatgct 929  Q
    ||| |||||||||| ||||    
T  12704615 tcctaggagtgtccgtgct 12704597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 811 - 934
Target Start/End: Original strand, 52369774 - 52369905
Alignment:
Q  811 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtccgacaccgggac 902  Q
    ||||| ||||| |||| ||||||||| |||||||||| |||||||||||||||        ||||||| || ||||||||||| ||||| ||||||||||    
T  52369774 cgacatggataataatttgagaaaattacataattcaatgtaatcataggtgtcgtgtcggtgtcggtatcggacaccgacgcgtgtccaacaccgggac 52369873  T
Q  903 acacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| ||| |||||||||| |||||||||    
T  52369874 acacctattccgaggagtgtccgtgcttcata 52369905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 779 - 934
Target Start/End: Complemental strand, 16789742 - 16789586
Alignment:
Q  779 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcaga 876  Q
    |||||||||| |||||||||| ||||| |||||||||| |||| |||| ||||||||| |||||||||||||||     ||| ||  ||||||| || ||    
T  16789742 ggacaccggagatgacacggataccgagatgccgacacagataataatttgagaaaatgacataattcagtgta-----aggcgtcgtgtcggtatcgga 16789648  T
Q  877 caccgac----gcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| ||    |  ||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16789647 caccaacacgtgtgtgtccgacaacgggacacacctaatcctaggagtgtccatgcttcata 16789586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 813 - 922
Target Start/End: Original strand, 21211289 - 21211400
Alignment:
Q  813 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 910  Q
    ||||||||| |||| ||||||||| ||||| ||||||||||| || |||||  |||||||||  ||||||||||| |||||||||| ||||||| |||||    
T  21211289 acacggataataatttgagaaaattacatagttcagtgtaattatgggtgtcgtgtcggtgttcgacaccgacgcgtgtccgacactgggacactcctaa 21211388  T
Q  911 tccaaggagtgt 922  Q
    ||| ||||||||    
T  21211389 tccgaggagtgt 21211400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 832 - 934
Target Start/End: Complemental strand, 40993374 - 40993276
Alignment:
Q  832 aaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttc 931  Q
    ||||| ||||||||||||||||| ||| ||||   ||||||| ||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgt---cggtgtcggacac-gacacatgtccgacaccgggacacgcctaatccgaggagtgtccatgcttc 40993279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 823 - 934
Target Start/End: Complemental strand, 3730213 - 3730109
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||||| ||| |||||||||||||||||||||||||| ||    ||| |||||| | ||||||||   ||||||||||||||||||| ||||||||    
T  3730213 taatttgagataatgacataattcagtgtaatcataggtgtcgt----gtctgacaccaatgcatgtcc---accgggacacacctaatccgaggagtgt 3730121  T
Q  923 ccatgcttcata 934  Q
    ||||||||||||    
T  3730120 ccatgcttcata 3730109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 803 - 934
Target Start/End: Original strand, 15864824 - 15864950
Alignment:
Q  803 cgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggac 902  Q
    ||||| ||||||||||||| |||| ||| ||||| | |||||| |||||||||||||||||     ||||| ||||||||| | |||| |||| ||||||    
T  15864824 cgacacgccgacacggataataatttgaaaaaatgatataatttagtgtaatcataggtgt----cgtgtcggacaccgacacgtgtctgaca-cgggac 15864918  T
Q  903 acacctaatccaaggagtgtccatgcttcata 934  Q
    || |||||||||| |||||||| |||||||||    
T  15864919 acgcctaatccaaagagtgtccgtgcttcata 15864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 776 - 933
Target Start/End: Original strand, 28917965 - 28918120
Alignment:
Q  776 cacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtc-- 873  Q
    ||||||||||||||| |||||||| || |||| |||||||  | || |||| ||| ||||| ||||||||||||||||| | | |   ||||||||||      
T  28917965 cacggacaccggacacgacacggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaag---tgtcggtgtcgt 28918061  T
Q  874 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
     |||| |||| | |||||||||| ||||||| ||||||||||||||||||| ||||||||    
T  28918062 ggaca-cgacacgtgtccgacactgggacacgcctaatccaaggagtgtccctgcttcat 28918120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 777 - 934
Target Start/End: Original strand, 55401040 - 55401193
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcaga 876  Q
    |||||||||||| | ||||||||||| || | ||||||||   || |||| ||| ||||| |||||||| |||||||| | | |   |||||||||| ||    
T  55401040 acggacaccggatacgacacggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaag---tgtcggtgtcgga 55401136  T
Q  877 caccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    || |||| | |||||||||||| ||||| |||||||| |||||||||| |||||||||    
T  55401137 ca-cgacacgtgtccgacaccgagacacgcctaatccgaggagtgtccgtgcttcata 55401193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 16000112 - 15999951
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||||||||||| ||| ||||| ||||| |||| ||||||||   || |||| | | ||||||||||||||||||||||  | | ||||   |||||||     
T  16000112 acacggacaccgaacacgacacagacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgt---cggtgtcg 16000016  T
Q  875 gacac-----cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||     |||| | |||||||||||||||||| ||||||||||||||||||| ||| |||||    
T  16000015 gacacgtacacgacacgtgtccgacaccgggacacgcctaatccaaggagtgtccgtgcatcata 15999951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 7171465 - 7171619
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||| ||||||||||| |||||||| || ||||||||||||| | |  |||| ||| ||||| | ||||||| ||||||| | | ||||||   |||||     
T  7171465 acacagacaccggacacgacacggatactgacatgccgacacagcttgtaatttga-aaaatcatataattcggtgtaattacaagtgttg---gtgtcg 7171560  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||| ||| | |||||||||||| ||||| |||||||||||||||||  ||||||||||    
T  7171561 gacac-gacacgtgtccgacaccgcgacacgcctaatccaaggagtgtatatgcttcata 7171619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 803 - 934
Target Start/End: Original strand, 8903423 - 8903553
Alignment:
Q  803 cgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccggg 900  Q
    ||||| ||||||||||||| || | ||||||||| ||||| || |||||||| ||||||||  ||||| || | |||||| | || ||||||||  ||||    
T  8903423 cgacacgccgacacggataatattttgagaaaatgacatattt-agtgtaattataggtgtcgtgtcgatgccggacacctatgcgtgtccgac--cggg 8903519  T
Q  901 acacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||| |||||||| | |||||||||    
T  8903520 acacacctaatccgaggagtgttcgtgcttcata 8903553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 777 - 854
Target Start/End: Complemental strand, 8587115 - 8587038
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||||||||||||||||| |||| ||||||||   || |||| ||| ||||| |||||||| ||||||||    
T  8587115 acggacaccggacatgacacggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaat 8587038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 810 - 936
Target Start/End: Complemental strand, 8789611 - 8789487
Alignment:
Q  810 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccg-acgcatgtccgacaccgggacacacct 908  Q
    ||||||||| |  |||| ||||||||| ||||||||| ||||||| ||| ||||   ||||||| |||||   || |||||| ||||||| ||||| |||    
T  8789611 ccgacacggcttataatttgagaaaatcacataattccgtgtaattatatgtgt---cggtgtcggacacgacacacatgtcggacaccgagacacgcct 8789515  T
Q  909 aatccaaggagtgtccatgcttcatact 936  Q
    ||||| |||||||||| |||||||||||    
T  8789514 aatccgaggagtgtccgtgcttcatact 8789487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 823 - 934
Target Start/End: Original strand, 20503476 - 20503583
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||| ||||| ||||||||||||||||| | | ||||   ||||||  ||||| ||| |||||| ||||||||||||| |||||||| ||||||||    
T  20503476 taatttgaaaaaatgacataattcagtgtaattacaagtgt---cggtgttggacac-gacacatgtctgacaccgggacacgcctaatccgaggagtgt 20503571  T
Q  923 ccatgcttcata 934  Q
    || |||||||||    
T  20503572 ccgtgcttcata 20503583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 832 - 934
Target Start/End: Original strand, 21861589 - 21861693
Alignment:
Q  832 aaaataacataattcagtgtaatcataggtgttg--tcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgct 929  Q
    ||||| ||||||||||||||||||||| |||| |  | ||||||| |||||||||| || ||  | |  ||||||||||||||| |||||||||| ||||    
T  21861589 aaaatgacataattcagtgtaatcataagtgtagcgttggtgtcaaacaccgacgcgtgaccaccgcttggacacacctaatccgaggagtgtccgtgct 21861688  T
Q  930 tcata 934  Q
    |||||    
T  21861689 tcata 21861693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 792 - 865
Target Start/End: Complemental strand, 25948966 - 25948893
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 865  Q
    ||||||||||| |||||||||| |||| || |||| ||| ||||| ||||||||||||||||| ||| ||||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttg 25948893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 882 - 934
Target Start/End: Original strand, 8039284 - 8039336
Alignment:
Q  882 acgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||||||| |||||||||||||||||||||||||||  ||||||||||    
T  8039284 acgcgtgtccgactccgggacacacctaatccaaggagtgtttatgcttcata 8039336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 775 - 863
Target Start/End: Original strand, 8383220 - 8383308
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||||| ||||| ||||||||||  |||| |||||||| | || |||| ||||||||| | ||||||||||||||| ||| ||||    
T  8383220 acacggacactggacacgacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgt 8383308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 840 - 932
Target Start/End: Original strand, 12100297 - 12100385
Alignment:
Q  840 ataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttca 932  Q
    ||||||||||||||| |||||||| ||    ||| |||||  |||| ||||||||||||||||||||||| ||| ||||||| || |||||||    
T  12100297 ataattcagtgtaataataggtgtcgt----gtctgacactaacgcgtgtccgacaccgggacacacctagtccgaggagtgcccgtgcttca 12100385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 775 - 854
Target Start/End: Complemental strand, 15796390 - 15796311
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||||||| ||||||||||  |||| |||||||| | || |||| ||| ||||| | |||||||||||||||    
T  15796390 acacggacaccggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaat 15796311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 823 - 933
Target Start/End: Original strand, 29508455 - 29508567
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggag 919  Q
    |||| ||| ||||| | ||||||||||||||| ||| ||||   ||| |||||| ||||| ||| || |||||||||||||||||  |||||||||| ||    
T  29508455 taatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacac-gacacacgtccgacaccgggacacgtctaatccaagaag 29508553  T
Q  920 tgtccatgcttcat 933  Q
    ||||| ||||||||    
T  29508554 tgtccgtgcttcat 29508567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 887 - 934
Target Start/End: Complemental strand, 34185100 - 34185053
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  34185100 tgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 34185053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 775 - 879
Target Start/End: Complemental strand, 34307876 - 34307770
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 872  Q
    ||||| |||||||||||||||| |||||  ||| || ||||| | || |||| ||||||||| ||||| ||||||||||| ||| ||||  |||||||||    
T  34307876 acacgaacaccggacatgacacagacacgaacacgctgacaccgctaataatttgagaaaatcacatatttcagtgtaattataagtgtcgtgtcggtgt 34307777  T
Q  873 cagacac 879  Q
    | |||||    
T  34307776 cggacac 34307770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 864 - 934
Target Start/End: Complemental strand, 2408661 - 2408591
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||| ||||||||| || || ||| |||||||||||||| ||||||| ||||||| ||| |||||||||    
T  2408661 tgtcggagtcagacactgatgcgtgttcgacaccgggacacgcctaatctaaggagtctccgtgcttcata 2408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 792 - 920
Target Start/End: Original strand, 10954932 - 10955056
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 891  Q
    |||||| |||| |||| ||||||||   || |||| ||| ||||| ||||||||||||||||||| | |   |||||||||| |||| |||| | |||||    
T  10954932 gacacgaacactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaag---tgtcggtgtcggaca-cgacacgtgtcc 10955027  T
Q  892 gacaccgggacacacctaatccaaggagt 920  Q
    ||||| ||||||| |||||||| ||||||    
T  10955028 gacactgggacacgcctaatccgaggagt 10955056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 779 - 865
Target Start/End: Complemental strand, 16192842 - 16192756
Alignment:
Q  779 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 865  Q
    ||||| |||||||||| | ||  ||||||  ||||||| | || |||| ||||||||||||||||||||||||||| ||| ||||||    
T  16192842 ggacatcggacatgactcagatgccgacacaccgacaccgttaataatttgagaaaataacataattcagtgtaattatatgtgttg 16192756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 27903596 - 27903756
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 872  Q
    |||||||||||||||| ||||  |||||| | ||| | |||| |||| |||| ||||||||  | |||||| | |||||||||| ||||  |||||||||    
T  27903596 acacggacaccggacacgaca-agacaccaatatgtcaacacagataataatttgagaaaacgatataatttaatgtaatcataagtgttgtgtcggtgt 27903694  T
Q  873 cagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    | || |||||||| |||| ||||| ||  ||  |||||||| || ||||||| |||||||||    
T  27903695 cggataccgacgcgtgtctgacactggatcatgcctaatccgagaagtgtccgtgcttcata 27903756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 880 - 934
Target Start/End: Complemental strand, 49651771 - 49651717
Alignment:
Q  880 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| ||| ||||||||||||||||||||||||| || ||||||| |||||||||    
T  49651771 cgacacatatccgacaccgggacacacctaatccgagaagtgtccgtgcttcata 49651717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 823 - 934
Target Start/End: Complemental strand, 51512231 - 51512118
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagt 920  Q
    |||| ||| ||||| |||||||||| || ||||||| ||||  ||||||||||  ||||||| || |||| |||||| |||||| ||||| | |||||||    
T  51512231 taatttgataaaatcacataattcaatggaatcatatgtgtcgtgtcggtgtcgaacaccgatgcgtgtctgacaccaggacacgcctaacctaaggagt 51512132  T
Q  921 gtccatgcttcata 934  Q
    ||||  ||||||||    
T  51512131 gtccgcgcttcata 51512118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 874 - 934
Target Start/End: Complemental strand, 5407260 - 5407200
Alignment:
Q  874 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||| ||| | |||||||| || |||||| |||||||||| ||||||||||||||||||    
T  5407260 agacacagacacgtgtccgacgccaggacacgcctaatccaaagagtgtccatgcttcata 5407200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 1389909 - 1389956
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||| |||||  ||||||||||||||||||| |||||||||    
T  1389909 tgtccgacaccaggacatgcctaatccaaggagtgtccgtgcttcata 1389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 804 - 863
Target Start/End: Original strand, 1830335 - 1830394
Alignment:
Q  804 gacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||||||||   || |||| | ||||||| ||||||||||||||||||||||||||    
T  1830335 gacatgccgacacttttaataatttaagaaaatgacataattcagtgtaatcataggtgt 1830394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Complemental strand, 3164019 - 3163972
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||| ||||| |||||| | ||||||||||||||||||||    
T  3164019 tgtccgacaccgagacacgcctaattcgaggagtgtccatgcttcata 3163972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 777 - 852
Target Start/End: Complemental strand, 4466694 - 4466619
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgta 852  Q
    ||||||||||||||||||||| |||| ||||  ||||||| | || |||| | ||||||| | |||||||||||||    
T  4466694 acggacaccggacatgacacgaacactgacactccgacaccggtaataatttaagaaaatcatataattcagtgta 4466619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 854
Target Start/End: Complemental strand, 4991063 - 4990984
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||| ||| |||||||| || ||||  ||||||| | || || | ||||||||| |||||||||||||||||    
T  4991063 acacggacaccgaacacgacacggagactgacactccgacaccgctaatagtttgagaaaattacataattcagtgtaat 4990984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 818 - 879
Target Start/End: Original strand, 20691325 - 20691383
Alignment:
Q  818 gatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacac 879  Q
    |||| |||| ||||||||| ||||||||||||||||||||| |   ||||||||||||||||    
T  20691325 gataataatttgagaaaatgacataattcagtgtaatcatatg---tgtcggtgtcagacac 20691383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 27505322 - 27505369
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||||  |||||||| |||||||||| |||||||||    
T  27505322 tgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttcata 27505369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 40052383 - 40052430
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||||| |||||||| |||||||| | |||||||||    
T  40052383 tgtccgacaccgggacacgcctaatccgaggagtgttcgtgcttcata 40052430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 775 - 853
Target Start/End: Complemental strand, 3164121 - 3164043
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaa 853  Q
    |||||||||||||||| ||||||||||  | || | |||||| | || |||| ||| ||||| ||||||||||||||||    
T  3164121 acacggacaccggacacgacacggacaatggcacgtcgacacagctaataatttgaaaaaatcacataattcagtgtaa 3164043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 887 - 933
Target Start/End: Complemental strand, 4987268 - 4987222
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |||||||||||||||||| |||||||| |||||||||| | ||||||    
T  4987268 tgtccgacaccgggacacgcctaatccgaggagtgtccgtacttcat 4987222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 774 - 816
Target Start/End: Complemental strand, 10335383 - 10335341
Alignment:
Q  774 aacacggacaccggacatgacacggacaccgacatgccgacac 816  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||    
T  10335383 aacacggacaccggacacgacacggacactgacacgccgacac 10335341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 14209173 - 14209242
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| ||||| ||| | ||| ||||| ||||| |||||||||||||| ||||||| |||||||||    
T  14209173 tgtcggtgtcggacac-gacacgtgtacgacatcgggatacacctaatccaagaagtgtccgtgcttcata 14209242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 792 - 854
Target Start/End: Original strand, 21720744 - 21720806
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||||||| |||| |||||||| |||| |||| |||||| ||  ||||||||||||||||    
T  21720744 gacacggacactgacacgccgacaccgataataatttgagaatatctcataattcagtgtaat 21720806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 773 - 863
Target Start/End: Original strand, 25093463 - 25093553
Alignment:
Q  773 aaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||| ||||||||||| ||||| |||||  ||| |||||||| | || | || ||||||||| ||| ||||||||||||| ||| ||||    
T  25093463 aaacacagacaccggacacgacactgacactaacacgccgacactgttaatgatttgagaaaatcacacaattcagtgtaattatatgtgt 25093553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 888 - 934
Target Start/End: Complemental strand, 51206340 - 51206294
Alignment:
Q  888 gtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||| ||  |||||||||||||||||| |||||||||    
T  51206340 gtccgacaccgggatacctctaatccaaggagtgtccgtgcttcata 51206294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 1e-28; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 769 - 930
Target Start/End: Original strand, 43249950 - 43250118
Alignment:
Q  769 tatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgt 866  Q
    |||||| ||||||||||||||| ||||||||||| |||| ||||||||||||| |||| ||||||||| ||||||| ||||||||| ||| ||||  |||    
T  43249950 tatgaagcacggacaccggacaagacacggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgt 43250049  T
Q  867 cggt-----gtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgctt 930  Q
    ||||     ||| ||||| ||||| ||||||||||| |||||| |||||| | |||||||||| |||||    
T  43250050 cggtgtcgcgtcggacactgacgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgctt 43250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 810 - 934
Target Start/End: Complemental strand, 7133339 - 7133213
Alignment:
Q  810 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt--cggtgtcagacaccgacgcatgtccgacaccgggacacacc 907  Q
    ||||||| |||  |||| ||||||||| ||||||||||||||||||||||||| |||  ||||||| ||||||||||| |||||||||| ||||||||||    
T  7133339 ccgacacagatgataatttgagaaaatgacataattcagtgtaatcataggtggtgtgtcggtgtcggacaccgacgcgtgtccgacactgggacacacc 7133240  T
Q  908 taatccaaggagtgtccatgcttcata 934  Q
    |||||  ||||| |||| |||||||||    
T  7133239 taatctgaggagcgtccgtgcttcata 7133213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 811 - 909
Target Start/End: Original strand, 23930218 - 23930318
Alignment:
Q  811 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacct 908  Q
    ||||||||||| |||| ||||||||| ||||||||||||||||||||||||||  |||||||||| || ||||| || ||||||||||||||| ||||||    
T  23930218 cgacacggatagtaatttgagaaaatgacataattcagtgtaatcataggtgttgtgtcggtgtcggataccgatgcgtgtccgacaccgggatacacct 23930317  T
Q  909 a 909  Q
    |    
T  23930318 a 23930318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 765 - 934
Target Start/End: Complemental strand, 4017900 - 4017730
Alignment:
Q  765 aagctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt- 863  Q
    |||||||||| ||| ||||| ||||| |||||||||||||||| ||||||||||||| |||| ||||||||  | |||||| |||||||||||| ||||     
T  4017900 aagctatgaagcacagacactggacacgacacggacaccgacacgccgacacggataataatttgagaaaacgatataatttagtgtaatcataagtgtc 4017801  T
Q  864 -tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
     ||| |||||| ||||||||||  |||| |||| ||| |||| ||||||| ||  ||||| | |||||||||    
T  4017800 gtgttggtgtcggacaccgacgtgtgtctgaca-cggaacacgcctaatctaaaaagtgttcgtgcttcata 4017730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 817 - 912
Target Start/End: Original strand, 5938477 - 5938574
Alignment:
Q  817 ggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt--cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatc 912  Q
    ||||| |||| ||| |||||||||||||||||| |||| |||||||||||  |||||||||||||||| || ||||||||||||| ||||||||||||    
T  5938477 ggataataatttgataaaataacataattcagtataattataggtgttgtgtcggtgtcagacaccgatgcgtgtccgacaccggaacacacctaatc 5938574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 803 - 922
Target Start/End: Complemental strand, 38804623 - 38804502
Alignment:
Q  803 cgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccggg 900  Q
    ||||| ||||||||||||| |||| | ||||||| ||||||| ||| ||||||||||||||  ||| |||||| ||||||||||  |||||||| |||||    
T  38804623 cgacacgccgacacggataataatttcagaaaatgacataatccagggtaatcataggtgtcgtgttggtgtcggacaccgacgtgtgtccgacgccggg 38804524  T
Q  901 acacacctaatccaaggagtgt 922  Q
    |||  |||||||| ||||||||    
T  38804523 acatgcctaatccgaggagtgt 38804502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 598171 - 598326
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    ||||||||||| |||||||||||||||| ||||   |||||| | || |||| | ||||||| || ||||| | ||||||  || |   |||||||||||    
T  598171 acacggacaccagacatgacacggacactgacacatcgacaccgctaataatttaagaaaatcacgtaattaaatgtaattgtaag---tgtcggtgtca 598267  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||| | |||||||||||||||||| |||||||| || ||||||| |||||||||    
T  598268 gaca-cgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 598326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 813 - 924
Target Start/End: Original strand, 12278836 - 12278943
Alignment:
Q  813 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatc 912  Q
    |||| |||| |||| | ||||||| ||||||||||||||||| ||| ||||     ||||| |||||| |||| |||| |||||||||||||||||||||    
T  12278836 acactgataataatttaagaaaatgacataattcagtgtaattatatgtgt----cgtgtcggacaccaacgcgtgtctgacaccgggacacacctaatc 12278931  T
Q  913 caaggagtgtcc 924  Q
    | ||||||||||    
T  12278932 ctaggagtgtcc 12278943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 21880117 - 21880270
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    ||||||||||||||||  ||||| ||||  |||||  ||||  | || |||| ||||||||| ||||||||||||||||| | | |   ||||||||||     
T  21880117 acacggacaccggaca--acacgaacactaacatgtggacatcgctaataatttgagaaaattacataattcagtgtaattacaag---tgtcggtgtcg 21880211  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||| ||||||||||||| |||||| |||||||| || ||||||| |||||||||    
T  21880212 gaca-cgacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcata 21880270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 777 - 854
Target Start/End: Original strand, 27945006 - 27945083
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||||| ||||||||||| |||| ||||||||   || |||| ||||||||| |||||||||||||||||    
T  27945006 acggacaccggacacgacacggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaat 27945083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 887 - 936
Target Start/End: Complemental strand, 32287451 - 32287402
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcatact 936  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  32287451 tgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatact 32287402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 796 - 897
Target Start/End: Complemental strand, 17780159 - 17780056
Alignment:
Q  796 cggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccga 893  Q
    ||||||||||||||| |||| ||||| |||| | ||||||| |||||||||  |||||| ||||||||  ||||||||||  |||||||||| ||||||     
T  17780159 cggacaccgacatgctgacatggataataatttaagaaaatgacataattctatgtaataataggtgtcgtgtcggtgtcgaacaccgacgcgtgtccgg 17780060  T
Q  894 cacc 897  Q
    ||||    
T  17780059 cacc 17780056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 777 - 934
Target Start/End: Original strand, 24339607 - 24339771
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcg 868  Q
    |||||||||||||| |||| |||||  |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | ||||        |||||    
T  24339607 acggacaccggacacgacatggacattgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcg 24339706  T
Q  869 gtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||| |||| |||| | | |||||||||||||||| |||||||| ||||||| || |||||||||    
T  24339707 gtgtcggaca-cgacacgtatccgacaccgggacacgcctaatccgaggagtgcccgtgcttcata 24339771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 797 - 934
Target Start/End: Original strand, 32308105 - 32308249
Alignment:
Q  797 ggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatg 888  Q
    |||||| |||| |||||||| | || |||| ||||||||| |||||||||||||||||  || ||||        |||||||||  ||||| ||| ||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacac-gacacatg 32308203  T
Q  889 tccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| |||||| ||||||| |||||||| |||||||||||    
T  32308204 tccgacaccgagacacagctaatccgaggagtgttcatgcttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 9778576 - 9778623
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||    
T  9778576 tgtccgacaccgggacacgcctaatccaaggagtgtccgtgcttcata 9778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 823 - 934
Target Start/End: Original strand, 1401036 - 1401141
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||||||| | ||||||||||||||||| ||| || |   ||||||| ||||| |||  |||||||||| ||||||||||||||||  ||||||||    
T  1401036 taatttgagaaactcacataattcagtgtaattataagtat---cggtgtccgacac-gac--atgtccgacatcgggacacacctaatctgaggagtgt 1401129  T
Q  923 ccatgcttcata 934  Q
    ||||||||||||    
T  1401130 ccatgcttcata 1401141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 793 - 933
Target Start/End: Original strand, 22868023 - 22868164
Alignment:
Q  793 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacac----cgacgcatg 888  Q
    |||| ||||| |||| ||||||||   || |||||||||||||| ||||||||||||||||| ||| ||||   | || ||| ||||    | || | ||    
T  22868023 acaccgacactgacacgccgacaccactaataatatgagaaaatcacataattcagtgtaattatatgtgt---cagtatcaaacacaacacaacacgtg 22868119  T
Q  889 tccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    || ||||||||||||||| |||||| |||||||||||||||||||    
T  22868120 tcagacaccgggacacacataatccgaggagtgtccatgcttcat 22868164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 778 - 934
Target Start/End: Complemental strand, 43027562 - 43027405
Alignment:
Q  778 cggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtca 874  Q
    ||||||| ||||| ||||||||||| |||| | |||| | | || |||| ||| ||||| ||||||| ||||||||  | | ||||   ||||| |||||    
T  43027562 cggacactggacacgacacggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcg-tgtca 43027464  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||| ||| | |||||||||||||||||| |||||||| | |||||||| |||||||||    
T  43027463 gacac-gacacgtgtccgacaccgggacacgcctaatccgatgagtgtccgtgcttcata 43027405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 5409932 - 5409772
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtg 871  Q
    |||| ||||||||| | |||| |||||| |||| || || || | || |||| ||| ||||| ||||||||||||| ||| | | ||||   ||||| ||    
T  5409932 acacagacaccggatacgacatggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcg-tg 5409834  T
Q  872 tcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    || ||||| ||| | |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  5409833 tcggacac-gacacgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 5409772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 768 - 863
Target Start/End: Complemental strand, 18233703 - 18233606
Alignment:
Q  768 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacg--gatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    ||||||||||| ||||||||||||||||| || || || |  | |||||   |||| |||| ||||||||| ||||||||||||||||| ||||||||    
T  18233703 ctatgaaacacagacaccggacatgacactgatactgatacacagacacacagatagtaatttgagaaaatgacataattcagtgtaattataggtgt 18233606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 811 - 934
Target Start/End: Original strand, 23751899 - 23752017
Alignment:
Q  811 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 910  Q
    ||||||||||| |||| ||| ||||| | |||||| |||||||||||||||||     ||||| ||||||||||| |||| |||| |||||||| |||||    
T  23751899 cgacacggataataatttgataaaatgatataatttagtgtaatcataggtgt----cgtgtcggacaccgacgcgtgtcagaca-cgggacacgcctaa 23751993  T
Q  911 tccaaggagtgtccatgcttcata 934  Q
    ||| |  ||||||  |||||||||    
T  23751994 tccgataagtgtctgtgcttcata 23752017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 864 - 922
Target Start/End: Original strand, 33994261 - 33994318
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||||||||||||||| ||| ||||||| |||||| ||||| |||||||||||||||||    
T  33994261 tgtcggtgtcagacac-gacacatgtccaacaccgagacacgcctaatccaaggagtgt 33994318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 891 - 932
Target Start/End: Complemental strand, 8842323 - 8842282
Alignment:
Q  891 cgacaccgggacacacctaatccaaggagtgtccatgcttca 932  Q
    |||||||||||||| ||||||||||||||||||| |||||||    
T  8842323 cgacaccgggacacgcctaatccaaggagtgtccgtgcttca 8842282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 780 - 923
Target Start/End: Original strand, 26733272 - 26733411
Alignment:
Q  780 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacac 879  Q
    |||||| |||| ||||||||||| |||| | |||||| | || |||| ||| ||||| |||||||||||| |||| | | |   |||||||||| ||||     
T  26733272 gacaccagacacgacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatg---tgtcggtgtcggaca- 26733367  T
Q  880 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtc 923  Q
    |||||||||||||| || || |||| |||||||| ||| |||||    
T  26733368 cgacgcatgtccgatacgggaacacgcctaatccgaggggtgtc 26733411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 776 - 848
Target Start/End: Complemental strand, 11722193 - 11722121
Alignment:
Q  776 cacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcag 848  Q
    |||||| |||||||| ||||||||||| |||| |||||||| | ||  ||| ||||||||| |||||||||||    
T  11722193 cacggataccggacacgacacggacactgacacgccgacaccgctaacaatttgagaaaatcacataattcag 11722121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 810 - 936
Target Start/End: Original strand, 20549789 - 20549911
Alignment:
Q  810 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacaccta 909  Q
    ||||||| | || |||| ||||||||| || |||||||||||||| ||| ||||   ||||||| |||||  || |||||||||||  | ||||| ||||    
T  20549789 ccgacaccgctaataatttgagaaaatcacgtaattcagtgtaattatatgtgt---cggtgtcggacaca-acacatgtccgacaatgagacacgccta 20549884  T
Q  910 atccaaggagtgtccatgcttcatact 936  Q
    |||| ||||||| || |||||||||||    
T  20549885 atccgaggagtgcccgtgcttcatact 20549911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 6490787 - 6490834
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||||| | |||||| |||||||||| |||||||||    
T  6490787 tgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcata 6490834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 17852071 - 17852118
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||| |||||||||||| | |||||||||| |||||||||    
T  17852071 tgtccgacaccgagacacacctaattcgaggagtgtccgtgcttcata 17852118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 776 - 847
Target Start/End: Original strand, 19206014 - 19206085
Alignment:
Q  776 cacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattca 847  Q
    |||||| ||| |||| |||||||||||| ||| |||||||| | || |||| ||||||||| ||||||||||    
T  19206014 cacggataccagacacgacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattca 19206085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 7438766 - 7438835
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||| |||| ||| ||||| ||||||  |||||| |||||| |||||||||||| |||||||||    
T  7438766 tgtcggtgtcaaacac-gacacatgtgcgacactaggacacgcctaattcaaggagtgtccgtgcttcata 7438835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 802
Target Start/End: Complemental strand, 10230168 - 10230134
Alignment:
Q  768 ctatgaaacacggacaccggacatgacacggacac 802  Q
    ||||||| |||||||||||||||||||||||||||    
T  10230168 ctatgaagcacggacaccggacatgacacggacac 10230134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 785 - 863
Target Start/End: Original strand, 15902795 - 15902873
Alignment:
Q  785 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||| ||||| ||||| |||||||||||||  ||| |||| ||| ||||| |||||||| |||||||| ||| ||||    
T  15902795 cggacacgacacagacactgacatgccgacaccaataataatttgataaaatcacataatttagtgtaattatatgtgt 15902873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 823 - 865
Target Start/End: Original strand, 17307904 - 17307946
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttg 865  Q
    |||| ||||||||||||||||||||||||||| ||| ||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttg 17307946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 875 - 933
Target Start/End: Complemental strand, 28943409 - 28943351
Alignment:
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    ||||||||||||||||||| |||   ||||||||||||  |||||||||| ||||||||    
T  28943409 gacaccgacgcatgtccgaaaccataacacacctaatctgaggagtgtccgtgcttcat 28943351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 885 - 931
Target Start/End: Complemental strand, 40287352 - 40287306
Alignment:
Q  885 catgtccgacaccgggacacacctaatccaaggagtgtccatgcttc 931  Q
    |||||||||||||||||||  |||||||| |||||||||| ||||||    
T  40287352 catgtccgacaccgggacatgcctaatccgaggagtgtccgtgcttc 40287306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 864 - 933
Target Start/End: Complemental strand, 26033460 - 26033392
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |||||||||||||||  ||| | ||||||| |||| |||||||||||||| |||||||||| || |||||    
T  26033460 tgtcggtgtcagacat-gacacgtgtccgataccgcgacacacctaatccgaggagtgtccgtgtttcat 26033392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 812 - 853
Target Start/End: Original strand, 41360910 - 41360951
Alignment:
Q  812 gacacggatattaatatgagaaaataacataattcagtgtaa 853  Q
    ||||| ||||||||| |||||||||||||||||||| |||||    
T  41360910 gacactgatattaatttgagaaaataacataattcaatgtaa 41360951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 5e-28; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 775 - 916
Target Start/End: Complemental strand, 14513270 - 14513127
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgt 872  Q
    |||||||||||| ||| || | ||| ||||||| ||| |||   ||| |||| ||||||||| ||||||||||| |||||||||| | |  |||||||||    
T  14513270 acacggacaccgaacacgatatggagaccgacacgccaacaaaaataataatttgagaaaattacataattcagcgtaatcatagatttggtgtcggtgt 14513171  T
Q  873 cagacaccgacgcatgtccgacaccgggacacacctaatccaag 916  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  14513170 cagacaccgacgcatgtccgacaccggaacacacctaatccaag 14513127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 39820392 - 39820546
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||| ||||||||||| ||||| |||||||||| || ||| || ||| |||| ||||||||| | |||||| |||||||||||||||||     |||||     
T  39820392 acacagacaccggacacgacacagacaccgacacgctgacccgtataataatttgagaaaatgatataatttagtgtaatcataggtgt----cgtgtcg 39820487  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||| ||||||||| |||||||| |||||||| || ||||||| |||||||||    
T  39820488 gacaccgacgcgtgtccgaca-cgggacacgcctaatccgagaagtgtccgtgcttcata 39820546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 777 - 934
Target Start/End: Original strand, 31556962 - 31557114
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcaga 876  Q
    ||||||||||||||||||| || ||| |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | || |   ||||||||||    
T  31556962 acggacaccggacatgacatggtcactgacacgccgacacagttaataatttga-aaaatcacataattcagtgtaattacaagttt---cggtgtcaga 31557057  T
Q  877 caccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||| ||| ||||||||||||| |||||| |||||||||||| |||||||||| |||||    
T  31557058 cac-gacacatgtccgacaccaggacacgcctaatccaaggtgtgtccatgcctcata 31557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 779 - 934
Target Start/End: Complemental strand, 29510396 - 29510234
Alignment:
Q  779 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggt 870  Q
    |||||||||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| ||| |||||||| |||| | | ||||        |||||||    
T  29510396 ggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggt 29510297  T
Q  871 gtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||| ||||| ||||| ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  29510296 gtcggacac-gacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 29510234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 810 - 934
Target Start/End: Complemental strand, 13009554 - 13009423
Alignment:
Q  810 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtccgacaccggga 901  Q
    |||||||||||| |||| |||||||| || |||||| |||||||||||| ||||        ||| |||||||||||||||||| |||||||||| ||||    
T  13009554 ccgacacggataataatttgagaaaacaatataatttagtgtaatcataagtgtcgtgtcggtgtaggtgtcagacaccgacgcctgtccgacac-ggga 13009456  T
Q  902 cacacctaatccaaggagtgtccatgcttcata 934  Q
    ||| |||||||||||||| |||| |||||||||    
T  13009455 cacgcctaatccaaggagcgtccgtgcttcata 13009423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 775 - 933
Target Start/End: Original strand, 44067479 - 44067644
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcg---- 868  Q
    ||||||||||| ||||  |||| ||||| |||| ||||||||||||| |||| ||||||||| ||||||| ||||||||| ||| ||||  |||||        
T  44067479 acacggacaccagacaccacaccgacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgtgtcggtgt 44067578  T
Q  869 -gtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
     ||||| ||||| || || ||||||||||| |||||| |||||| | |||||||||| ||||||||    
T  44067579 cgtgtcggacactgatgcgtgtccgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 44067644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 780 - 863
Target Start/End: Complemental strand, 28883969 - 28883886
Alignment:
Q  780 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||| |||||| ||||||||| ||||||||| |||| ||| |||| ||||||||| ||||||||||||| ||||||||||||    
T  28883969 gacacctgacatgtcacggacactgacatgccgccacgaataataatttgagaaaatgacataattcagtggaatcataggtgt 28883886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 812 - 934
Target Start/End: Complemental strand, 30068087 - 30067969
Alignment:
Q  812 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaat 911  Q
    |||||||||| |||| ||||||||| |||||||||||| ||||| ||||||    | | ||| || |||||||  |||||||||| ||||||||||||||    
T  30068087 gacacggataataatttgagaaaatgacataattcagtataatcgtaggtg----ccgagtcggataccgacgtgtgtccgacactgggacacacctaat 30067992  T
Q  912 ccaaggagtgtccatgcttcata 934  Q
    || | |||||||| |||||||||    
T  30067991 ccgatgagtgtccgtgcttcata 30067969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 811 - 933
Target Start/End: Original strand, 1676711 - 1676829
Alignment:
Q  811 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 910  Q
    ||||||||||| |||| || |||||| ||||| || |||||||||||||||||     ||||| ||||||||| |||||| |||||| | ||||||||||    
T  1676711 cgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgt----cgtgtcggacaccgacacatgtctgacacctgcacacacctaa 1676806  T
Q  911 tccaaggagtgtccatgcttcat 933  Q
    ||| | | |||||| ||||||||    
T  1676807 tccgaagggtgtccgtgcttcat 1676829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 810 - 934
Target Start/End: Original strand, 40063949 - 40064080
Alignment:
Q  810 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacac-----cgacgcatgtccgacaccgggac 902  Q
    |||||||  ||| |||| ||||||||| |||||||||| |||||||||||| ||  ||||||||||  ||||     |||||  ||||||||||||||||    
T  40063949 ccgacaccaataataatttgagaaaatgacataattcattgtaatcataggcgtcgtgtcggtgtccaacacgtcgccgacgtgtgtccgacaccgggac 40064048  T
Q  903 acacctaatccaaggagtgtccatgcttcata 934  Q
    ||| ||||||| |||||||||| |||| ||||    
T  40064049 acatctaatccgaggagtgtccgtgctacata 40064080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 797 - 936
Target Start/End: Original strand, 3658132 - 3658273
Alignment:
Q  797 ggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacac-cgacgcatgtccga 893  Q
    |||||||||||   ||||||||||| |||| |||||||||||  || ||||||||||||||||||||  ||| | |||| ||||| || || ||||||||    
T  3658132 ggacaccgacacatcgacacggataataatttgagaaaataatgtagttcagtgtaatcataggtgtcgtgttgatgtcggacacgcgtcg-atgtccga 3658230  T
Q  894 caccgggacacacctaatccaaggagtgtccatgcttcatact 936  Q
    || |  ||||| |||||| | |||||||||| |||||||||||    
T  3658231 catcaagacacgcctaattcgaggagtgtccgtgcttcatact 3658273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 779 - 854
Target Start/End: Complemental strand, 37283902 - 37283827
Alignment:
Q  779 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||| |||||||||||||||| ||||||| | ||| | || |||| ||||||||| |||||||||||||||||    
T  37283902 ggacaccagacatgacacggacactgacatgcgggcaccgctaataatctgagaaaatcacataattcagtgtaat 37283827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 17751704 - 17751774
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| ||||| |||||||  ||||||||||||||| |||||||| ||||||||||  ||||||||    
T  17751704 tgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcata 17751774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 17760691 - 17760761
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| ||||| |||||||  ||||||||||||||| |||||||| ||||||||||  ||||||||    
T  17760691 tgtcggtgtcggacacagacgcatagccgacaccgggacacgcctaatccgaggagtgtccgcgcttcata 17760761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 22651939 - 22652105
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 866  Q
    |||| ||||||||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| |||||||||| | |||| | | ||||        |||    
T  22651939 acactgacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgt 22652038  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| |||| ||||   ||||||||||||||||||  ||||||| |||||||||| |||||||||    
T  22652039 cggtgtcggaca-cgacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 22652105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 777 - 863
Target Start/End: Complemental strand, 24362296 - 24362210
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||||||| | ||||| |||||||||| |||||||| | || |||| ||||| ||| ||||||||||||||||| ||| ||||    
T  24362296 acggacaccggatacgacacagacaccgacacgccgacaccgctaataatttgagagaatcacataattcagtgtaattatatgtgt 24362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 774 - 933
Target Start/End: Complemental strand, 926885 - 926730
Alignment:
Q  774 aacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtc 873  Q
    ||||||||||||||||| ||||||||||| |||| ||| ||||   || |||| |||||||||  |||  ||||||||||| ||| |   ||||||||||    
T  926885 aacacggacaccggacacgacacggacactgacacgccaacactcctaataatttgagaaaatctcattgttcagtgtaattataag---tgtcggtgtc 926789  T
Q  874 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
     |||  |||| | |||||||||||||||||  | | |||| |||||||||| ||||||||    
T  926788 ggac-gcgacacgtgtccgacaccgggacatgctttatccgaggagtgtccgtgcttcat 926730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 831 - 934
Target Start/End: Original strand, 2035758 - 2035866
Alignment:
Q  831 gaaaataacataattcagtgtaatcataggtgttgt-------cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtc 923  Q
    ||||||||||| |||||||||||| |||||||| ||       |||||||||||  |||||| ||||||||||||||| ||||||||||| || || |||    
T  2035758 gaaaataacattattcagtgtaattataggtgtcgtatcgtgccggtgtcagac--cgacgcgtgtccgacaccgggagacacctaatccgagtagcgtc 2035855  T
Q  924 catgcttcata 934  Q
    | |||||||||    
T  2035856 cgtgcttcata 2035866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 798 - 933
Target Start/End: Complemental strand, 20679468 - 20679337
Alignment:
Q  798 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacacc 897  Q
    ||||| |||||| ||||||   || |||| ||||||||| ||||| ||||||||||| ||| ||||   ||||||||||| |  || | |||||||||||    
T  20679468 gacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgt---cggtgtcagacgca-acacgtgtccgacacc 20679373  T
Q  898 gggacacacctaatccaaggagtgtccatgcttcat 933  Q
    ||||||| ||| | || |||||||||||||||||||    
T  20679372 gggacacgccttaaccgaggagtgtccatgcttcat 20679337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 882 - 934
Target Start/End: Original strand, 13397617 - 13397669
Alignment:
Q  882 acgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||||| ||||| |||||| |||||||||||| |||||||||    
T  13397617 acgcatgtccgacaccgagacacgcctaattcaaggagtgtccgtgcttcata 13397669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 792 - 934
Target Start/End: Complemental strand, 36450833 - 36450695
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 891  Q
    ||||||||||| |||| ||||||||   || |||| ||| ||||| ||| ||||||||||||| | | |||| |   ||||| ||||| ||||| |||||    
T  36450833 gacacggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgtag---gtgtcggacac-gacgcgtgtcc 36450738  T
Q  892 gacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||| |||||| |||||||| |||||||||  |||||||||    
T  36450737 gacaccaggacacgcctaatccgaggagtgtctgtgcttcata 36450695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 810 - 934
Target Start/End: Complemental strand, 35431201 - 35431081
Alignment:
Q  810 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacaccta 909  Q
    |||| ||||||| |||| ||||||||| ||||| || |||||||||||||||||     ||||| |||| ||| |||| ||| ||||| |||||| ||||    
T  35431201 ccgaaacggataataatttgagaaaatgacatattttagtgtaatcataggtgt----cgtgtcggacatcgatgcatatccaacaccaggacaccccta 35431106  T
Q  910 atccaaggagtgtccatgcttcata 934  Q
    ||||||  ||||||  |||||||||    
T  35431105 atccaaaaagtgtctgtgcttcata 35431081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 875 - 934
Target Start/End: Complemental strand, 38487217 - 38487158
Alignment:
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||| ||||||||||| |||||||| |||||| |||||||||  |||||||||    
T  38487217 gacaccgacgcgtgtccgacacccggacacacataatccgaggagtgtctgtgcttcata 38487158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 880 - 934
Target Start/End: Complemental strand, 4673409 - 4673355
Alignment:
Q  880 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||  |||||||||    
T  4673409 cgacgcatatccgacaccggaacacgcctaatccaaggagtgtctgtgcttcata 4673355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 892 - 934
Target Start/End: Complemental strand, 34127215 - 34127173
Alignment:
Q  892 gacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||| |||||||||||||||||||||||||| |||||||||    
T  34127215 gacacctggacacacctaatccaaggagtgtccgtgcttcata 34127173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 823 - 933
Target Start/End: Original strand, 3025562 - 3025668
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||||||||| ||||||||||||||||| |||||   |||| ||||| |||| |||| | |||| ||||| | |||||  ||||||| ||||||||    
T  3025562 taatttgagaaaatcacataattcagtgtaattatagg---tgtcagtgtcggaca-cgacacgtgtctgacactgtgacacggctaatccgaggagtgt 3025657  T
Q  923 ccatgcttcat 933  Q
    || ||||||||    
T  3025658 ccgtgcttcat 3025668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 882 - 934
Target Start/End: Original strand, 13403172 - 13403224
Alignment:
Q  882 acgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||||| ||||| | |||| |||||||||||| |||||||||    
T  13403172 acgcatgtccgacaccgagacacgcttaattcaaggagtgtccgtgcttcata 13403224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 779 - 847
Target Start/End: Complemental strand, 13437056 - 13436988
Alignment:
Q  779 ggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattca 847  Q
    ||||||||||||||||| |||||| |||| |||||||| | || |||| ||| ||||| ||||||||||    
T  13437056 ggacaccggacatgacatggacactgacacgccgacacagctaataatttgaaaaaatcacataattca 13436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 864 - 912
Target Start/End: Complemental strand, 14659706 - 14659658
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatc 912  Q
    ||||||||||||||||| |||| ||||| |||||| |||||||||||||    
T  14659706 tgtcggtgtcagacaccaacgcgtgtccaacaccgagacacacctaatc 14659658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 823 - 913
Target Start/End: Original strand, 18646183 - 18646270
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatcc 913  Q
    |||| ||| ||||| |||| ||||||||||||||||  |||||   ||||| ||||||||||||||||| | |  ||||||||||||||||    
T  18646183 taatttgaaaaaatgacatgattcagtgtaatcatatatgttg---gtgtcggacaccgacgcatgtccaataatgggacacacctaatcc 18646270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 818 - 865
Target Start/End: Original strand, 3508058 - 3508105
Alignment:
Q  818 gatattaatatgagaaaataacataattcagtgtaatcataggtgttg 865  Q
    |||| |||| |||||||||||||||||||| |||||||||| ||||||    
T  3508058 gataataatttgagaaaataacataattcaatgtaatcatatgtgttg 3508105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Complemental strand, 8798841 - 8798794
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||| |||| ||||||||||||||||||||  |||||||    
T  8798841 tgtccgacaccggaacacgcctaatccaaggagtgtccagacttcata 8798794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 891 - 934
Target Start/End: Complemental strand, 13436954 - 13436911
Alignment:
Q  891 cgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||| ||||||||||||||||||  |||||||||    
T  13436954 cgacaccgggacacgcctaatccaaggagtgtctgtgcttcata 13436911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 864 - 934
Target Start/End: Complemental strand, 3951546 - 3951477
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||| ||| | |||| ||||| || |||| ||||||||||||||| ||| |||||||||    
T  3951546 tgtcggtgtcagacac-gacacgtgtctgacacgggaacacgcctaatccaaggagtttccgtgcttcata 3951477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 880 - 934
Target Start/End: Complemental strand, 6065641 - 6065587
Alignment:
Q  880 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| ||||||||||||||| |||| | |||| |||||||||||| |||||||||    
T  6065641 cgacacatgtccgacaccggaacacgcataattcaaggagtgtccgtgcttcata 6065587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 24413656 - 24413500
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaa-tatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtc 873  Q
    ||||||||||| |||| ||||||||||| ||||| | ||||| | || ||| | ||||||||  ||||||||||| ||||| ||| |   |||| |||||    
T  24413656 acacggacaccagacacgacacggacactgacatactgacaccgttaataattttgagaaaaatacataattcagggtaattataag---tgtcagtgtc 24413560  T
Q  874 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
     |||| ||| || ||||| ||| ||||||||  ||||||| || ||||||| |||||||||    
T  24413559 ggaca-cgatgcgtgtccaacagcgggacacgtctaatccgagaagtgtccgtgcttcata 24413500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 864 - 934
Target Start/End: Complemental strand, 34451031 - 34450962
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| ||||| ||| | |||| ||||| ||||||| ||| ||||||||||||||| |||||||||    
T  34451031 tgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 34450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 777 - 854
Target Start/End: Complemental strand, 4673519 - 4673442
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||| |||||| ||||| ||||| |||| |||||||| |||| |||| ||| ||||| | | |||||||||||||    
T  4673519 acggacatcggacacgacacagacactgacacgccgacacagataataatttgaaaaaatcataaaattcagtgtaat 4673442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 788 - 845
Target Start/End: Complemental strand, 10497899 - 10497842
Alignment:
Q  788 acatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataatt 845  Q
    ||||||||| ||||| |||| |||||||||||||  | | ||||||||||||||||||    
T  10497899 acatgacactgacacagacacgccgacacggataaaattttgagaaaataacataatt 10497842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 823 - 934
Target Start/End: Original strand, 14134710 - 14134817
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||||||||| ||||||||||||||||| |||     ||||||||||| ||| |||| | |||||| |||| |||||| |||||| | ||||||||    
T  14134710 taatttgagaaaatcacataattcagtgtaattata---tatgtcggtgtcaaaca-cgacacgtgtccgtcaccaggacacgcctaattcgaggagtgt 14134805  T
Q  923 ccatgcttcata 934  Q
    || || ||||||    
T  14134806 ccgtgtttcata 14134817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 889 - 934
Target Start/End: Complemental strand, 15816104 - 15816059
Alignment:
Q  889 tccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||| |||||||| || ||||||| |||||||||    
T  15816104 tccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 15816059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 893 - 934
Target Start/End: Complemental strand, 16641951 - 16641910
Alignment:
Q  893 acaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||||||||| |||||||||  |||||||||    
T  16641951 acaccgggacacacctaatccgaggagtgtctgtgcttcata 16641910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 785 - 854
Target Start/End: Original strand, 20873042 - 20873111
Alignment:
Q  785 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||| ||||||||||| |||| |||||||  |||| |||| ||| ||||| |||||||| ||||||||    
T  20873042 cggacacgacacggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaat 20873111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 774 - 807
Target Start/End: Complemental strand, 26609848 - 26609815
Alignment:
Q  774 aacacggacaccggacatgacacggacaccgaca 807  Q
    |||||||||||| |||||||||||||||||||||    
T  26609848 aacacggacaccagacatgacacggacaccgaca 26609815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 774 - 863
Target Start/End: Complemental strand, 28385091 - 28385002
Alignment:
Q  774 aacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||| || | ||| ||||||||||| ||||| ||||||| | || ||||||||  ||||  |||||||||||||||| ||| ||||    
T  28385091 aacacggatactgaacacgacacggacactgacataccgacaccgttaataatatgaataaatctcataattcagtgtaattatatgtgt 28385002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 2e-27; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 11308099 - 11307935
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 866  Q
    |||||||||||||||||| |||| ||||||| || |||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||        |||    
T  11308099 acacggacaccggacatggcacgaacaccgatataccgacacggata-taatttgaaaaaatgacataattcagtgtaatcataggtgtcgtgtcggtgt 11308001  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||  ||||||||||| |||||||||||  || |||| |||||| |||||||||| |||||||||    
T  11308000 cggtgttggacaccgacgcgtgtccgacacc--gaaacacttaatccgaggagtgtccgtgcttcata 11307935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 774 - 934
Target Start/End: Complemental strand, 23354749 - 23354582
Alignment:
Q  774 aacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tg 865  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||| | |||||| |||||||||||||||||        ||    
T  23354749 aacacggacaccggacatgacacggacaccgacatgctgacacagataataatttgagaaaatgatataatttagtgtaatcataggtgtcgtgtcggtg 23354650  T
Q  866 tcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| ||| |||||||||   |||| |||| |||||||| |||||||| |||||||||| || ||||||    
T  23354649 tcggggtcggacaccgaccggtgtctgaca-cgggacacgcctaatccgaggagtgtccgtggttcata 23354582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 777 - 933
Target Start/End: Complemental strand, 23355089 - 23354926
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtc- 873  Q
    |||||||| ||||||||||||||||||||||||| ||||| |||| |||| ||||||||| | |||||| |||| ||||||||||||  ||||||||||     
T  23355089 acggacacgggacatgacacggacaccgacatgctgacacagataataatttgagaaaatgatataatttagtgcaatcataggtgtcatgtcggtgtcg 23354990  T
Q  874 -----agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
          ||||||||| | |||| |||| |||||||| |||||||| |||||||||| ||||||||    
T  23354989 gggttggacaccgacccgtgtctgaca-cgggacacgcctaatccgaggagtgtccttgcttcat 23354926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 785 - 934
Target Start/End: Complemental strand, 18841099 - 18840954
Alignment:
Q  785 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacg 884  Q
    |||||| |||| |||||| |||| || |||||   || |||| ||| ||||| |||||||| |||||||| | | ||||   ||||||||||||| |||     
T  18841099 cggacacgacatggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgt---cggtgtcagacac-gaca 18841004  T
Q  885 catgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  18841003 catgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 18840954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 818 - 934
Target Start/End: Complemental strand, 34007044 - 34006931
Alignment:
Q  818 gatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaagg 917  Q
    |||| |||| ||||||| | ||||||||||||||||||||||||||   ||||||  |||||| |  | |||| |||||||| ||||||||||| |||||    
T  34007044 gataataatttgagaaattgacataattcagtgtaatcataggtgt---cggtgtgggacacctattcgtgtctgacaccggaacacacctaattcaagg 34006948  T
Q  918 agtgtccatgcttcata 934  Q
    ||||||| |||||||||    
T  34006947 agtgtccgtgcttcata 34006931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 766 - 866
Target Start/End: Original strand, 12748644 - 12748738
Alignment:
Q  766 agctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 865  Q
    ||||||||||||| ||||||||||| |||||||||||      || |||| ||||| |||| ||||||||| ||||| ||||||||||||||||||||||    
T  12748644 agctatgaaacacagacaccggacacgacacggacac------gctgacatggataataatttgagaaaatgacatagttcagtgtaatcataggtgttg 12748737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 828 - 934
Target Start/End: Complemental strand, 18889634 - 18889520
Alignment:
Q  828 tgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggag 919  Q
    ||||||||| ||||||||||||||||||||| ||||        |||  ||||| ||||||||||||||||||||||| |||||||||||| ||||| ||    
T  18889634 tgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcttgtttgtgtcggacaccgacgcatgtccgacacccggacacacctaacccaagtag 18889535  T
Q  920 tgtccatgcttcata 934  Q
    ||||  |||||||||    
T  18889534 tgtctctgcttcata 18889520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 780 - 933
Target Start/End: Complemental strand, 2438808 - 2438661
Alignment:
Q  780 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacac 879  Q
    |||||||||||  |||||||||| |||  || ||||| | || |||| | | ||||| ||||||||||||||||| | | |   |||||||||| ||||     
T  2438808 gacaccggacaaaacacggacactgac--gctgacacagctaataatttcaaaaaatcacataattcagtgtaattacaag---tgtcggtgtcggaca- 2438715  T
Q  880 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |||| |||||||||||||||||||| |||||||| |||||||||| ||||||||    
T  2438714 cgacacatgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 2438661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 768 - 854
Target Start/End: Complemental strand, 30404952 - 30404867
Alignment:
Q  768 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||| |||||| || ||||||||||||||||| |||| |||||||||| || |||| ||| ||||| |||||||||||||||||    
T  30404952 ctatgaagcacggatac-ggacatgacacggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaat 30404867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 794 - 875
Target Start/End: Original strand, 25544465 - 25544546
Alignment:
Q  794 cacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcag 875  Q
    ||||||||||||||  |||||||| ||| |||| ||||||||| | ||||||||||||||||||||||||  ||||||||||||    
T  25544465 cacggacaccgaca--ccgacacgtataataatttgagaaaatgatataattcagtgtaatcataggtgtcgtgtcggtgtcag 25544546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 37419803 - 37419872
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| ||||| || || |||||||||||||||||| |||||||| |||||||||| |||||||||    
T  37419803 tgtcggtgtcggacac-gatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcata 37419872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 15972836 - 15972991
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||| |||||| || | ||||||||||| |||| ||||||||   || |||| ||| ||||| ||| ||||||||||||| | | |   ||||||||||     
T  15972836 acacagacaccagatacgacacggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaag---tgtcggtgtcg 15972932  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||| | |||||||| |||||||||||||||||| | || ||||| |||||||||    
T  15972933 gaca-cgacacgtgtccgacgccgggacacacctaatccgaagaatgtccgtgcttcata 15972991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 809 - 923
Target Start/End: Original strand, 24011033 - 24011149
Alignment:
Q  809 gccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacac 906  Q
    |||||||  |||| |||| ||||||||| |||||||| |||||||||||||||||   ||||||||| || || || || |||||||||||  |||||||    
T  24011033 gccgacattgataataatttgagaaaatgacataatttagtgtaatcataggtgtcgcgtcggtgtctgatacggatgcgtgtccgacaccaagacacac 24011132  T
Q  907 ctaatccaaggagtgtc 923  Q
     |||||| | |||||||    
T  24011133 ataatccgaagagtgtc 24011149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 787 - 863
Target Start/End: Original strand, 21616737 - 21616813
Alignment:
Q  787 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||| ||||||||||| |||| |||||||| | || |||| ||||||||| ||||||||||||||||| ||| ||||    
T  21616737 gacacgacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 775 - 854
Target Start/End: Original strand, 18276484 - 18276563
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||||||| || || ||||| || |||||||||| | || |||| ||||||||| || ||||||||||||||    
T  18276484 acacggacaccggacacgatacagacactgatatgccgacaccgctaataatttgagaaaatcacttaattcagtgtaat 18276563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 803 - 862
Target Start/End: Original strand, 19573969 - 19574028
Alignment:
Q  803 cgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtg 862  Q
    ||||| |||||||| |||| |||| | ||||||||||||||||||||||||| |||||||    
T  19573969 cgacacgccgacaccgataataatttaagaaaataacataattcagtgtaattataggtg 19574028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 809 - 863
Target Start/End: Complemental strand, 10535821 - 10535767
Alignment:
Q  809 gccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||| |||| |||| ||||||||| ||||||||||||||||||||| ||||    
T  10535821 gccgacaccgataataatttgagaaaatgacataattcagtgtaatcataagtgt 10535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 887 - 933
Target Start/End: Original strand, 19942336 - 19942382
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||||    
T  19942336 tgtctgacaccgggacacgcctaatccgaggagtgtccatgcttcat 19942382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 785 - 863
Target Start/End: Original strand, 23717999 - 23718077
Alignment:
Q  785 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||||||||||||| ||||  ||||||| | || |||| ||||||| | ||||||||||||||||| ||| ||||    
T  23717999 cggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgt 23718077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 785 - 863
Target Start/End: Original strand, 24105671 - 24105749
Alignment:
Q  785 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||||||||||||| ||||  ||||||| | || |||| ||||||| | ||||||||||||||||| ||| ||||    
T  24105671 cggacatgacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgt 24105749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 37497169 - 37497239
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||||||| ||||| || ||||||||||   ||||||| || ||||||| |||||||||    
T  37497169 tgtcggtgtcagacaccgacacatgttcggcaccgggacatggctaatcccagaagtgtccgtgcttcata 37497239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 887 - 933
Target Start/End: Complemental strand, 42832280 - 42832234
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |||||||| ||||||||| ||||||||||||||||||| ||||||||    
T  42832280 tgtccgactccgggacacgcctaatccaaggagtgtccttgcttcat 42832234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 773 - 854
Target Start/End: Original strand, 4332887 - 4332968
Alignment:
Q  773 aaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||||||||| | ||| || ||  |||||||||||| |||| |||| || |||||| |||||||||| ||||||    
T  4332887 aaacacggacaccggacacggcacagatacttacatgccgacactgataataatttgggaaaatcacataattcaatgtaat 4332968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 887 - 924
Target Start/End: Original strand, 21624333 - 21624370
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtcc 924  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  21624333 tgtccgacagcgggacacacctaatccaaggagtgtcc 21624370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 886 - 934
Target Start/End: Original strand, 18622672 - 18622720
Alignment:
Q  886 atgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||| |||||||||||||| |||||| |||||||||| |||||||||    
T  18622672 atgtcctacaccgggacacacttaatccgaggagtgtccgtgcttcata 18622720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 864 - 936
Target Start/End: Original strand, 28596518 - 28596589
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcatact 936  Q
    |||||||||| ||||| ||| | ||||||||||  |||||| |||||||| |||||||||| |||||||||||    
T  28596518 tgtcggtgtcggacac-gacacgtgtccgacactcggacactcctaatccgaggagtgtccgtgcttcatact 28596589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 768 - 892
Target Start/End: Original strand, 896169 - 896288
Alignment:
Q  768 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtc 867  Q
    ||||||| || |||||||||||| |||||  |||| |||| |||||||| | || || | ||||||||| ||||| |||| |||||||||| |   ||||    
T  896169 ctatgaagcatggacaccggacacgacac--acactgacacgccgacactgctaatagtttgagaaaatcacatatttcaatgtaatcatatg---tgtc 896263  T
Q  868 ggtgtcagacaccgacgcatgtccg 892  Q
    || ||| |||||| |||||||||||    
T  896264 ggcgtcggacaccaacgcatgtccg 896288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 823 - 916
Target Start/End: Original strand, 5367203 - 5367292
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaag 916  Q
    |||| |||| |||| ||||||||||||||||| ||| |   |||||||||| |||| |||| ||| |||||| ||||||||| |||||||||||    
T  5367203 taatttgaggaaatcacataattcagtgtaattatatg---tgtcggtgtcggaca-cgacacatatccgactccgggacacgcctaatccaag 5367292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 793 - 863
Target Start/End: Original strand, 6249182 - 6249250
Alignment:
Q  793 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||||| ||||||  ||||| |||| |||| ||||||||||  ||||||||||||| ||||||||||    
T  6249182 acacggacacagacatg--gacaccgataataatttgagaaaatattataattcagtgtattcataggtgt 6249250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 811 - 866
Target Start/End: Original strand, 30563408 - 30563463
Alignment:
Q  811 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgt 866  Q
    ||||||||||| |||| ||||||||| |||||||||| |||||  |||||||||||    
T  30563408 cgacacggataataatttgagaaaatgacataattcaatgtaactataggtgttgt 30563463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 854
Target Start/End: Original strand, 31284011 - 31284090
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||||||||||||| ||||| ||||  ||| |||||||| | || |||| ||||||||| ||||||| || ||||||    
T  31284011 acacggacaccggacataacacgtacacttacacgccgacactgctaataatttgagaaaatcacataatccattgtaat 31284090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Complemental strand, 38117147 - 38117100
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||||| |||||||| ||| |||||| |||||||||    
T  38117147 tgtccgacaccgggacacgcctaatccgaggggtgtccgtgcttcata 38117100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 44860402 - 44860449
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||| ||||||||||||||| | |||||||||| |||||||||    
T  44860402 tgtccgacatcgggacacacctaattcgaggagtgtccgtgcttcata 44860449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 868 - 934
Target Start/End: Complemental strand, 6180857 - 6180791
Alignment:
Q  868 ggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||| ||||||||| ||||||||| || | |||||||||||||  |||||| ||| |||||||||    
T  6180857 ggtgtcggacaccgactcatgtccgatactgagacacacctaatctgaggagtttccgtgcttcata 6180791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 826 - 856
Target Start/End: Original strand, 11439809 - 11439839
Alignment:
Q  826 tatgagaaaataacataattcagtgtaatca 856  Q
    |||||||||||||||||||||||||||||||    
T  11439809 tatgagaaaataacataattcagtgtaatca 11439839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 887 - 933
Target Start/End: Original strand, 15657946 - 15657992
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |||||||| ||||||||| |||| ||| |||||||||||||||||||    
T  15657946 tgtccgacgccgggacacgcctagtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 780 - 854
Target Start/End: Complemental strand, 21782909 - 21782835
Alignment:
Q  780 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||| ||||| |||||  |||| |||| |||||||| | || |||| ||||||||| |||||||||||||||||    
T  21782909 gacactggacacgacacaaacactgacacgccgacactgctaataatttgagaaaatcacataattcagtgtaat 21782835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 785 - 863
Target Start/End: Original strand, 23406841 - 23406919
Alignment:
Q  785 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    ||||||||||| ||||||| ||||| || | | |||| |||| | ||||||| |||||||||||  |||||||||||||    
T  23406841 cggacatgacatggacaccaacatgtcgtcgcagataataatttaagaaaattacataattcagaataatcataggtgt 23406919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 24009344 - 24009413
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| ||||| ||| | |||| ||||| ||||||| ||| ||||||||||||||| |||||||||    
T  24009344 tgtcggtgtcggacac-gacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcata 24009413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 885 - 934
Target Start/End: Original strand, 19980744 - 19980793
Alignment:
Q  885 catgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||| || |||||||||||||| || ||||| |||||||||||    
T  19980744 catgtccgacatcgagacacacctaatccgagaagtgttcatgcttcata 19980793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 893 - 930
Target Start/End: Original strand, 27460111 - 27460148
Alignment:
Q  893 acaccgggacacacctaatccaaggagtgtccatgctt 930  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  27460111 acaccgggacacgtctaatccaaggagtgtccatgctt 27460148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 1e-25; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 813 - 934
Target Start/End: Complemental strand, 6936458 - 6936335
Alignment:
Q  813 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 910  Q
    ||||||||| |||| ||||||||| |||||||| |||||||||||||||||  |||| ||||| ||||||||||||| ||||||||| | | || | |||    
T  6936458 acacggataataatctgagaaaatgacataattaagtgtaatcataggtgtcgtgtctgtgtcggacaccgacgcatatccgacaccagaatacccttaa 6936359  T
Q  911 tccaaggagtgtccatgcttcata 934  Q
    ||| ||||||||||||||||||||    
T  6936358 tccgaggagtgtccatgcttcata 6936335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 780 - 934
Target Start/End: Complemental strand, 20157441 - 20157285
Alignment:
Q  780 gacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtcaga 876  Q
    ||||||||||| ||||||| ||| ||||   |||||| | || |||| ||||||||| ||||||||||||||||||||| ||||   |||| ||||| ||    
T  20157441 gacaccggacacgacacgggcactgacacatcgacaccgctaataatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtc-gtgtccga 20157343  T
Q  877 caccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||| |||||||||||| ||||||||||||   |||||| ||| |||||||||    
T  20157342 caccgacgcgtgtccgacaccgagacacacctaatttgaggagtatccgtgcttcata 20157285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 810 - 934
Target Start/End: Complemental strand, 40747834 - 40747708
Alignment:
Q  810 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacc 907  Q
    |||||||||||| |||| ||||||||| |||||||||| |||||| ||||||||  ||| |||||| ||||||||  ||||||| |||| ||||||| ||    
T  40747834 ccgacacggataataatttgagaaaatgacataattcaatgtaattataggtgtcatgttggtgtcggacaccgatccatgtcccacacagggacacccc 40747735  T
Q  908 taatccaaggagtgtccatgcttcata 934  Q
    |||||| ||||| |||| |||||||||    
T  40747734 taatccgaggagcgtccgtgcttcata 40747708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 812 - 896
Target Start/End: Complemental strand, 42005006 - 42004920
Alignment:
Q  812 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacac 896  Q
    |||||||||| |||| ||||||||| |||||||| |||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  42005006 gacacggataataatttgagaaaatgacataatttagtgtaatcataggtgttgtgtcggtgtcggacaccgacgcatgtccgacac 42004920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 776 - 934
Target Start/End: Complemental strand, 2896216 - 2896062
Alignment:
Q  776 cacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcag 875  Q
    |||||||| ||||||  |||||||||| |||| |||||||| | || |||| ||||||||| |||||||||||||||   |||  |||   |||||||||    
T  2896216 cacggacaacggacacaacacggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtagctatatatgt---cggtgtcag 2896120  T
Q  876 acaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||   ||||||| |||||||||||||||||||||| |||||||||| ||||||    
T  2896119 acac-gacatgtgtccgagaccgggacacacctaatccaagaagtgtccatgtttcata 2896062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 22794174 - 22794019
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    ||||||| |||||| | ||||  ||||| |||| | | ||||||||| |||| ||| ||||| ||||||| ||||||||| |||||||| ||    |||     
T  22794174 acacggataccggatacgacatagacactgacacgtcaacacggataataatttgaaaaaatgacataatacagtgtaattataggtgtcgt----gtcc 22794079  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||| |||||||||||||| |||||||||||||||| | |||||||| | |||||||||    
T  22794078 gacactgacgcatgtccgactccgggacacacctaattcgaggagtgtacgtgcttcata 22794019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 798 - 934
Target Start/End: Complemental strand, 17831604 - 17831463
Alignment:
Q  798 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcg-----gtgtcagacaccgacgcatgtccg 892  Q
    ||||| |||| |||||||| | || |||| ||||||||| |||| |||||||||||||||| |||| ||||     ||||| |||||||||   ||||||    
T  17831604 gacactgacacgccgacaccgctaataatttgagaaaatcacattattcagtgtaatcatatgtgtcgtcgtgtcagtgtcggacaccgacatgtgtccg 17831505  T
Q  893 acaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||| |||||||  ||||||||||||| ||||||    
T  17831504 acaccgggacacgcctaatcttaggagtgtccatgtttcata 17831463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 775 - 936
Target Start/End: Complemental strand, 10577831 - 10577674
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||||||||||||||| |||||||||||||||| |||||||| | || |  | | ||||||| ||| ||| ||||||||| ||| |   |||||| | |     
T  10577831 acacggacaccggacacgacacggacaccgacacgccgacacagctaatttttttagaaaatcacaaaatgcagtgtaattatatg---tgtcgggggcg 10577735  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcatact 936  Q
    |||| |||||| |||| ||||| ||||||| ||| ||||||||||||||| |||||||||||    
T  10577734 gaca-cgacgcgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatact 10577674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 32899939 - 32900009
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| |||||||||||||||| ||||||||||||| |||||||| |||| ||||| |||||||||    
T  32899939 tgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcata 32900009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 818 - 924
Target Start/End: Complemental strand, 351137 - 351029
Alignment:
Q  818 gatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaa 915  Q
    |||| |||| ||| ||||| |||||||||| || ||||||| || |  ||||| ||| |||||||||||||||| | |||||||||||| ||||||||||    
T  351137 gataataatttgataaaatcacataattcaatggaatcatatgtatcgtgtcgctgttagacaccgacgcatgttcaacaccgggacacgcctaatccaa 351038  T
Q  916 ggagtgtcc 924  Q
    |||||||||    
T  351037 ggagtgtcc 351029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 778 - 863
Target Start/End: Complemental strand, 398858 - 398773
Alignment:
Q  778 cggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    ||||||||||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| ||||||||    
T  398858 cggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgt 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 823 - 934
Target Start/End: Complemental strand, 40258981 - 40258874
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||| ||||| ||||||||||||||||| | | |   ||||||||||||||| |||| | ||||||||||| |||||| |||||||| ||||||||    
T  40258981 taatttgaaaaaatcacataattcagtgtaattacaag---tgtcggtgtcagaca-cgacacctgtccgacaccaggacacgcctaatccgaggagtgt 40258886  T
Q  923 ccatgcttcata 934  Q
    ||||||||||||    
T  40258885 ccatgcttcata 40258874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 775 - 933
Target Start/End: Complemental strand, 1486805 - 1486646
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtg 871  Q
    ||||||| |||||| | |||||||| || |||| || ||||| | || |||| ||| ||||| ||||||||||||||||| ||| ||||   ||||| ||    
T  1486805 acacggataccggatacgacacggatactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcg-tg 1486707  T
Q  872 tcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    || ||||| ||| | |||||||||||||||||| |||||||| |||||||||  ||||||||    
T  1486706 tcggacac-gacacgtgtccgacaccgggacacgcctaatccgaggagtgtctgtgcttcat 1486646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 785 - 930
Target Start/End: Complemental strand, 5898352 - 5898211
Alignment:
Q  785 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacg 884  Q
    |||||||||||| ||||| || | |||||||| | || |||| ||| ||||| ||||||||||||||||| ||| |    |||||||||||||| ||||     
T  5898352 cggacatgacacagacactgagacgccgacaccgctaataatctgaaaaaatcacataattcagtgtaattatatg---cgtcggtgtcagaca-cgaca 5898257  T
Q  885 catgtccgacaccgggacacacctaatccaaggagtgtccatgctt 930  Q
    | ||||| ||||||||||||  ||||||| |||||||||| |||||    
T  5898256 cgtgtccaacaccgggacacgtctaatccgaggagtgtccgtgctt 5898211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 774 - 853
Target Start/End: Complemental strand, 15641127 - 15641048
Alignment:
Q  774 aacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaa 853  Q
    |||||||||| |||||||||||||||||| ||||||||||||| | || |||| | ||||||| |||| |||||||||||    
T  15641127 aacacggacatcggacatgacacggacactgacatgccgacactgctaataatttaagaaaatcacatgattcagtgtaa 15641048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 887 - 934
Target Start/End: Complemental strand, 1704983 - 1704936
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  1704983 tgtccgacaccgagacacgcctaatccaaggagtgtccatgcttcata 1704936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 813 - 905
Target Start/End: Complemental strand, 24176425 - 24176325
Alignment:
Q  813 acacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagacaccgacgcatgtccgacaccgggacac 904  Q
    |||| |||| |||| |||||||||||||| |||||||||||| ||||||||        |||||||||| |||||||||| |||||| ||||||||||||    
T  24176425 acaccgataataatttgagaaaataacatcattcagtgtaattataggtgtcgagatcatgtcggtgtcggacaccgacgaatgtccaacaccgggacac 24176326  T
Q  905 a 905  Q
    |    
T  24176325 a 24176325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 798 - 934
Target Start/End: Original strand, 36878447 - 36878584
Alignment:
Q  798 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtc-----cg 892  Q
    ||||| |||| |||||||| | || |||| ||||||||| ||||||||||||||||| |||||   |||||||||| |||| |||  ||||||     ||    
T  36878447 gacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatagg---tgtcggtgtctgaca-cgaaacatgtccgacacg 36878542  T
Q  893 acaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| ||||||| |||||||| |||||||||| |||||||||    
T  36878543 acacggggacacgcctaatcccaggagtgtccgtgcttcata 36878584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 768 - 934
Target Start/End: Original strand, 40917707 - 40917878
Alignment:
Q  768 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatca------taggt 861  Q
    ||||||||||||||||||||||| |||||||| || |||| |||||||| | || |||| ||| |||||  || |||| |||||||| |      | |||    
T  40917707 ctatgaaacacggacaccggacacgacacggatactgacacgccgacacagctaataatttgaaaaaat--cacaattaagtgtaattacaagtctcggt 40917804  T
Q  862 gt--tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||  |||||||||  |||| |||| | |||||||||||||||||| |||||||| |||| ||||| |||||||||    
T  40917805 gtcgtgtcggtgttggaca-cgacacgtgtccgacaccgggacacgcctaatccgaggactgtccgtgcttcata 40917878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 775 - 933
Target Start/End: Complemental strand, 42359545 - 42359391
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    ||||| |||||| |||  |||||||||| |||| || |||||   || |||| ||| ||||| ||| ||||||||||||| | | ||||   |||||||     
T  42359545 acacgaacaccgtacacaacacggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgt---cggtgtcg 42359449  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    ||||  ||||  |||||||||||||||||| |||||||| |||||||||| ||||||||    
T  42359448 gacaa-gacgtgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcat 42359391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 812 - 933
Target Start/End: Complemental strand, 11412827 - 11412709
Alignment:
Q  812 gacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaat 911  Q
    ||||| |||| |||||||||||||| |||||||||| ||| ||||||||   |||||||||  |||||| ||   ||||||||||  |||||  ||| ||    
T  11412827 gacaccgataataatatgagaaaatgacataattcaatgtgatcatagg---tgtcggtgttggacaccaacatgtgtccgacactaggacatgccttat 11412731  T
Q  912 ccaaggagtgtccatgcttcat 933  Q
    || |||||||||| ||||||||    
T  11412730 cctaggagtgtccgtgcttcat 11412709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 784 - 854
Target Start/End: Complemental strand, 5376587 - 5376517
Alignment:
Q  784 ccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||| |||||||||||  ||| |||||||| | || |||| | |||||||||||||||||||||||||    
T  5376587 ccggacacgacacggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaat 5376517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 864 - 934
Target Start/End: Original strand, 9828104 - 9828173
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| ||||||||||| ||| | ||||||||||||||||||  ||||||| |||||||||| |||||||||    
T  9828104 tgtccgtgtcagacac-gacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcata 9828173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 892 - 934
Target Start/End: Complemental strand, 27965983 - 27965941
Alignment:
Q  892 gacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  27965983 gacaccgggacacgcctaatccgaggagtgtccatgcttcata 27965941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 798 - 934
Target Start/End: Complemental strand, 38076043 - 38075910
Alignment:
Q  798 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacacc 897  Q
    ||||| |||| | |||||| | || |||| |||| |||| |||||| |||||||||||||| ||||   ||||||| |||| ||| |  || ||||||||    
T  38076043 gacacggacacgacgacactgctaataatttgagtaaatcacataagtcagtgtaatcatatgtgt---cggtgtcggacatcgatgtgtgaccgacacc 38075947  T
Q  898 gggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| ||||||   |||||||| |||||||||||    
T  38075946 gggacacgcctaatttgaggagtgtacatgcttcata 38075910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 795 - 934
Target Start/End: Original strand, 1815240 - 1815375
Alignment:
Q  795 acggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgac 894  Q
    |||||||| |||| ||||||||  ||| | || | | ||||| ||||||||||||||||| | | |   |||||||||| |||| |||| ||||||||||    
T  1815240 acggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaag---tgtcggtgtccgaca-cgacacatgtccgac 1815335  T
Q  895 accgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| |||||||  ||||||| || || ||||||    
T  1815336 accgggacacgcctaatctgaggagtgaccgtgattcata 1815375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 823 - 922
Target Start/End: Complemental strand, 18190156 - 18190061
Alignment:
Q  823 taatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgt 922  Q
    |||| ||| ||||| ||||||||||||||||| | | ||||   || ||||||||||  || | ||||||||||||||||||||||||||| ||||||||    
T  18190156 taatttgaaaaaattacataattcagtgtaattacaagtgt---cgatgtcagacaca-acacgtgtccgacaccgggacacacctaatccgaggagtgt 18190061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 786 - 854
Target Start/End: Complemental strand, 25452233 - 25452165
Alignment:
Q  786 ggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||||||  |||||||||||||| |||| | || |||| |||||||||  ||||||||||||||||    
T  25452233 ggacatgacaaagacaccgacatgccaacactgctaataatttgagaaaatctcataattcagtgtaat 25452165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 775 - 863
Target Start/End: Original strand, 38503283 - 38503371
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||||| |||||||||||||||||  |||  ||||||| | || |||| ||||||||| | ||| ||||||||||| ||| ||||    
T  38503283 acacggacacgggacatgacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgt 38503371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 792 - 934
Target Start/End: Complemental strand, 46348462 - 46348324
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtcc 891  Q
    ||||||||||| |||| |||||||| | || |||| ||| ||||| | |||||| |||||||| | | |   |||||||||| |||| |||| | |||||    
T  46348462 gacacggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaag---tgtcggtgtcggaca-cgacacgtgtcc 46348367  T
Q  892 gacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||| ||||| ||| |||| ||| |||||| |||||||||    
T  46348366 gacaccgagacacgcctgatccgaggtgtgtccgtgcttcata 46348324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 113364 - 113411
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||| |||||||||||| |||||||| ||||||| ||||||||||||    
T  113364 tgtccaacaccgggacacgcctaatccgaggagtgcccatgcttcata 113411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 854
Target Start/End: Complemental strand, 6612267 - 6612188
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||| |||||||||| ||||||||||  |||| ||||| || | || |||| ||| ||||| |||||||||||||||||    
T  6612267 acacgaacaccggacacgacacggacaatgacacgccgatacagttaataatttgaaaaaattacataattcagtgtaat 6612188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 10233327 - 10233374
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||| ||||||||||||||  |||||||||| |||||||||    
T  10233327 tgtccgacaccaggacacacctaatcagaggagtgtccgtgcttcata 10233374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 775 - 854
Target Start/End: Original strand, 15323126 - 15323205
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||||||| |||| |||||| |||||| ||| || | || |||| ||| ||||| |||||||| ||||||||    
T  15323126 acacggacaccggacacgacatggacactgacatgtcgatacagttaataatttgaaaaaatcacataatttagtgtaat 15323205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 863 - 934
Target Start/End: Original strand, 15765805 - 15765876
Alignment:
Q  863 ttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||  ||||||  |||| ||||| ||||||| |||||||| | |||||||| |||||||||    
T  15765805 ttgtcggtgtcagatgccgacgtgtgtctgacactgggacacgcctaatccgaagagtgtccgtgcttcata 15765876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 792 - 863
Target Start/End: Complemental strand, 30847799 - 30847728
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    ||||||| ||||||||||| ||||| | || |||| ||| ||||| |||||||||| |||||||||| ||||    
T  30847799 gacacgggcaccgacatgctgacactgctaataatttgaaaaaatgacataattcaatgtaatcatatgtgt 30847728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 892 - 934
Target Start/End: Complemental strand, 7918197 - 7918155
Alignment:
Q  892 gacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||| ||||||||||||||| |||||||||| |||||||||    
T  7918197 gacaccaggacacacctaatccgaggagtgtccgtgcttcata 7918155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 887 - 933
Target Start/End: Complemental strand, 16297269 - 16297223
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    ||||||||||| |||||| |||||||| |||||||||| ||||||||    
T  16297269 tgtccgacaccaggacacgcctaatccgaggagtgtccgtgcttcat 16297223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 864 - 934
Target Start/End: Complemental strand, 32461463 - 32461394
Alignment:
Q  864 tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| ||||| ||| | |||| ||||| ||||||| ||||||||||| ||||||| |||||||||    
T  32461463 tgtcggtgtcggacac-gacacgtgtctgacactgggacacgcctaatccaagaagtgtccgtgcttcata 32461394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 885 - 934
Target Start/End: Original strand, 5944363 - 5944412
Alignment:
Q  885 catgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    ||||||||||||||||| || |||||||| |||||||| | |||||||||    
T  5944363 catgtccgacaccgggatacgcctaatccgaggagtgttcgtgcttcata 5944412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 777 - 854
Target Start/End: Complemental strand, 10572683 - 10572606
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||||| |||| | |||| |||| ||||||||   || |||| ||||||||| ||||||||| |||||||    
T  10572683 acggacaccggacacgacatgaacactgacacgccgacaccactaataatttgagaaaatcacataattcggtgtaat 10572606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 788 - 857
Target Start/End: Original strand, 16812519 - 16812588
Alignment:
Q  788 acatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcat 857  Q
    ||||||||||||||| ||||  |||||||  ||| |||| ||| ||||| ||||||||||||| ||||||    
T  16812519 acatgacacggacactgacacaccgacaccaataataatttgacaaaatcacataattcagtggaatcat 16812588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 810 - 863
Target Start/End: Complemental strand, 39101243 - 39101190
Alignment:
Q  810 ccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt 863  Q
    |||||||  ||| |||| |||||||||||||||||| |||||||| ||||||||    
T  39101243 ccgacacatataataatttgagaaaataacataattaagtgtaattataggtgt 39101190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 777 - 826
Target Start/End: Complemental strand, 48040556 - 48040507
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaat 826  Q
    |||||||||||||| ||||||||||| |||| |||||||| |||| ||||    
T  48040556 acggacaccggacacgacacggacactgacacgccgacacagataataat 48040507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 785 - 854
Target Start/End: Complemental strand, 48450673 - 48450604
Alignment:
Q  785 cggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||| ||||||||||| |||| ||| |||| | || |||| ||| |||||||||||||| ||||||||    
T  48450673 cggacacgacacggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaat 48450604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 58; Significance: 7e-24; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 775 - 934
Target Start/End: Complemental strand, 558 - 403
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||||||||||| ||| | ||||||||| || | |||||||| | || |||| ||| ||||| ||| ||||||||||||| | | |   ||||||||||     
T  558 acacggacaccgaacacgccacggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaag---tgtcggtgtcg 462  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||    
T  461 gaca-cgacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 1e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 775 - 933
Target Start/End: Complemental strand, 225364 - 225199
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--tgtcg---- 868  Q
    |||||||||||||||| ||||||||||| |||| |||||||| |||| |||| ||||||||| ||||||| || |||||| ||| ||||  ||| |        
T  225364 acacggacaccggacacgacacggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgtgttggtgt 225265  T
Q  869 -gtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
     ||||| ||||| ||||| ||| ||||||| |||||| |||||| | |||||||||| ||||||||    
T  225264 cgtgtcggacactgacgcgtgttcgacaccaggacacgcctaattcgaggagtgtccgtgcttcat 225199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 777 - 933
Target Start/End: Original strand, 13365 - 13523
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtc 873  Q
    |||||||||||| ||||||||||||| |||| ||||||||   || |||| ||||||||| ||||||||||||| ||| | | | ||   ||||||||||    
T  13365 acggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtc 13464  T
Q  874 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
     |||| |||| |  ||| |||||  |||||||||||||||||||||||||| ||||||||    
T  13465 ggaca-cgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 13523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 777 - 933
Target Start/End: Complemental strand, 21962 - 21804
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---tgtcggtgtc 873  Q
    |||||||||||| ||||||||||||| |||| ||||||||   || |||| ||||||||| ||||||||||||| ||| | | | ||   ||||||||||    
T  21962 acggacaccggagatgacacggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtcggtgtc 21863  T
Q  874 agacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
     |||| |||| |  ||| |||||  |||||||||||||||||||||||||| ||||||||    
T  21862 ggaca-cgacacgcgtctgacactaggacacacctaatccaaggagtgtccgtgcttcat 21804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 768 - 934
Target Start/End: Original strand, 241550 - 241723
Alignment:
Q  768 ctatgaaacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt---- 863  Q
    ||||||| ||||||||||||||| ||||||||||| |||| |||||||| | || |||| ||  ||||| |||||||| |||||||| ||  ||||        
T  241550 ctatgaagcacggacaccggacacgacacggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggt 241649  T
Q  864 ----tgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
        ||| |||||| |||| |||| | |||||||||||||||||| |||||||| || ||||||| |||||||||    
T  241650 gtcgtgttggtgtcggaca-cgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcata 241723  T

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Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 869 - 934
Target Start/End: Complemental strand, 236980 - 236915
Alignment:
Q  869 gtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||| |||| || || |||| |||||||||||||||||||||  |||||||||  |||||||||    
T  236980 gtgtcatacacggatgcgtgtctgacaccgggacacacctaatctgaggagtgtctgtgcttcata 236915  T

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Target: scaffold0103 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 792 - 934
Target Start/End: Original strand, 51791 - 51941
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacac-cgacg------ 884  Q
    ||||||||||| |||| |||||||| | || |||| ||| ||||| ||||||||||||||||| | | ||||||||||||||||||||   |||          
T  51791 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgttgtcggtgtcagacacgatacgtgtccg 51890  T
Q  885 -catgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
     | ||||| |||||||||||| |||||||| |||| |||||||||||||||    
T  51891 tcgtgtccaacaccgggacacgcctaatccgaggaatgtccatgcttcata 51941  T

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Target: scaffold0598 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 792 - 861
Target Start/End: Complemental strand, 8132 - 8063
Alignment:
Q  792 gacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggt 861  Q
    |||||||||||||||| | ||| ||||||| |||| ||||||||| |||||||||||||||| |||||||    
T  8132 gacacggacaccgacacgtcgatacggataataatttgagaaaatgacataattcagtgtaaacataggt 8063  T

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Target: scaffold0199 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 811 - 933
Target Start/End: Original strand, 1948 - 2066
Alignment:
Q  811 cgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccgacaccgggacacacctaa 910  Q
    ||||||||||| |||| || |||||| ||||| || |||||||||||||||||     ||||| ||||||||| |||||| |||||| | ||||||||||    
T  1948 cgacacggataataatttgtgaaaatgacatattttagtgtaatcataggtgt----cgtgtcggacaccgacacatgtctgacacctgcacacacctaa 2043  T
Q  911 tccaaggagtgtccatgcttcat 933  Q
    ||| | | |||||| ||||||||    
T  2044 tccgaagggtgtccgtgcttcat 2066  T

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Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 775 - 934
Target Start/End: Original strand, 8761 - 8916
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtca 874  Q
    |||||||||||||||| ||||||||||| |||| |||||||| | || |||| ||| ||||| | || ||| |||||||| | | |   ||||||||||     
T  8761 acacggacaccggacacgacacggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaag---tgtcggtgtcg 8857  T
Q  875 gacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||| | |||||||||||| ||||| |||||||  |||||| ||| |||||||||    
T  8858 gaca-cgacacgtgtccgacaccgagacacgcctaatctgaggagtctccgtgcttcata 8916  T

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Target: scaffold0223 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 777 - 854
Target Start/End: Original strand, 20137 - 20214
Alignment:
Q  777 acggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||||| ||||||||||  |||| |||||||| | || |||| ||| ||||| |||||||||||||||||    
T  20137 acggacaccggacacgacacggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaat 20214  T

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Target: scaffold0168 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 774 - 843
Target Start/End: Original strand, 21005 - 21074
Alignment:
Q  774 aacacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataa 843  Q
    |||||||||||| |||| ||||||||||| ||||||| ||||||| || |||| ||||||||| ||||||    
T  21005 aacacggacaccagacacgacacggacactgacatgctgacacggttaataatttgagaaaatcacataa 21074  T

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Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 793 - 932
Target Start/End: Original strand, 70259 - 70394
Alignment:
Q  793 acacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttgtcggtgtcagacaccgacgcatgtccg 892  Q
    |||| ||||| |||||| |||||| | || |||| ||| ||||||||||||||||||||||| ||| |   |||||||||| |||| |||| | ||||||    
T  70259 acacagacacagacatgtcgacacagttaataatttgaaaaaataacataattcagtgtaattataag---tgtcggtgtcggaca-cgacacgtgtccg 70354  T
Q  893 acaccgggacacacctaatccaaggagtgtccatgcttca 932  Q
    ||||| |||||  |||||||| | |||||| | |||||||    
T  70355 acaccaggacatgcctaatccgatgagtgttcgtgcttca 70394  T

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Target: scaffold0027 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 775 - 854
Target Start/End: Original strand, 46645 - 46724
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    ||||||||| |||||| ||||||||||  |||| |||||||| | || |||| ||| ||||| |||||||||||||||||    
T  46645 acacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaat 46724  T

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Target: scaffold0021 (Bit Score: 36; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 775 - 854
Target Start/End: Original strand, 130445 - 130524
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||||||||||| ||||||||||  |||| |||||||| | || || | ||| ||||| |||||||||||||||||    
T  130445 acacggacaccggacacgacacggacaatgacaagccgacacagttaatagtttgaaaaaatcacataattcagtgtaat 130524  T

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Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 880 - 934
Target Start/End: Complemental strand, 4876 - 4822
Alignment:
Q  880 cgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||| |||||||||||| ||||||| |||||||| |||||||||| |||||||||    
T  4876 cgacacatgtccgacacagggacacgcctaatccgaggagtgtccgtgcttcata 4822  T

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Target: scaffold0136 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 787 - 934
Target Start/End: Complemental strand, 3933 - 3779
Alignment:
Q  787 gacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgtcggtgtcagaca 878  Q
    |||| ||||| ||||| || |||||||||||| || |||| | | ||||| ||||||||||||||||| | | ||||        ||| |||||| ||||    
T  3933 gacacgacacagacactgatatgccgacacggttaataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggaca 3834  T
Q  879 ccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    | ||| ||||||||||| || ||||| |||||||| |||||||||| |||||||||    
T  3833 c-gacacatgtccgacatcgagacacgcctaatccgaggagtgtccttgcttcata 3779  T

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Target: scaffold0008 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 775 - 933
Target Start/End: Complemental strand, 263468 - 263303
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgt--------tgt 866  Q
    |||||||||| ||| | ||||||||||| |||||| | |||| | || |||| ||||||||  ||||||||||||||||| ||| ||||        |||    
T  263468 acacggacactggatacgacacggacactgacatgtcaacactgctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgt 263369  T
Q  867 cggtgtcagacaccgacgcatgtccgacaccgggacacacctaatccaaggagtgtccatgcttcat 933  Q
    |||||||||||| |||| | ||| ||| |||  ||||| |||||||| |||||||||| || |||||    
T  263368 cggtgtcagaca-cgacacgtgttcgataccaagacacgcctaatccgaggagtgtccgtggttcat 263303  T

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Target: scaffold0380 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 8672 - 8719
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||| |||| || ||||||||||||||||||| |||||||||    
T  8672 tgtccgacactgggatacgcctaatccaaggagtgtccgtgcttcata 8719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 887 - 934
Target Start/End: Original strand, 32775 - 32822
Alignment:
Q  887 tgtccgacaccgggacacacctaatccaaggagtgtccatgcttcata 934  Q
    |||||||||||||||||||| |||||| |||||||||  |||||||||    
T  32775 tgtccgacaccgggacacacataatccgaggagtgtcggtgcttcata 32822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 798 - 865
Target Start/End: Original strand, 99879 - 99946
Alignment:
Q  798 gacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaatcataggtgttg 865  Q
    ||||| |||||| |||||| |||| |||| | |||||||||||||||||| |||||| ||| ||||||    
T  99879 gacacggacatgtcgacaccgataataattttagaaaataacataattcaatgtaattatatgtgttg 99946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 795 - 854
Target Start/End: Original strand, 92790 - 92849
Alignment:
Q  795 acggacaccgacatgccgacacggatattaatatgagaaaataacataattcagtgtaat 854  Q
    |||||||| |||| |||||||| | || |||| ||||||||| |||||||||||||||||    
T  92790 acggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaat 92849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 775 - 816
Target Start/End: Original strand, 9861 - 9902
Alignment:
Q  775 acacggacaccggacatgacacggacaccgacatgccgacac 816  Q
    |||||||||||||||| |||| ||||||||||| ||||||||    
T  9861 acacggacaccggacacgacatggacaccgacacgccgacac 9902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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