View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4458-Insertion-5 (Length: 413)

Name: NF4458-Insertion-5
Description: NF4458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4458-Insertion-5
NF4458-Insertion-5
[»] chr7 (25 HSPs)
chr7 (12-145)||(39603525-39603658)
chr7 (344-413)||(1565779-1565848)
chr7 (344-413)||(1738497-1738566)
chr7 (344-413)||(7240760-7240829)
chr7 (344-413)||(9268767-9268836)
chr7 (344-413)||(31319449-31319518)
chr7 (344-413)||(38063963-38064032)
chr7 (344-413)||(46840871-46840940)
chr7 (344-407)||(23314195-23314258)
chr7 (329-413)||(22285698-22285779)
chr7 (344-413)||(94368-94437)
chr7 (344-413)||(7482236-7482305)
chr7 (344-413)||(28536801-28536870)
chr7 (344-413)||(36016246-36016315)
chr7 (344-413)||(36583406-36583475)
chr7 (344-413)||(38441471-38441540)
chr7 (344-413)||(4790259-4790328)
chr7 (349-413)||(33418392-33418456)
chr7 (344-413)||(9575420-9575489)
chr7 (344-413)||(40840169-40840238)
chr7 (328-379)||(9268840-9268888)
chr7 (193-230)||(39603663-39603700)
chr7 (329-379)||(1738446-1738493)
chr7 (329-379)||(7240833-7240880)
chr7 (329-379)||(7482309-7482356)
[»] chr4 (39 HSPs)
chr4 (19-145)||(21827774-21827905)
chr4 (344-413)||(3372132-3372201)
chr4 (344-413)||(3904733-3904802)
chr4 (344-413)||(20538736-20538805)
chr4 (344-413)||(24704381-24704450)
chr4 (344-413)||(47833622-47833691)
chr4 (344-413)||(48336274-48336343)
chr4 (344-413)||(53337381-53337450)
chr4 (347-413)||(5986890-5986956)
chr4 (347-413)||(33621810-33621876)
chr4 (329-413)||(43900548-43900629)
chr4 (344-413)||(3992987-3993056)
chr4 (344-413)||(6121943-6122012)
chr4 (344-413)||(33551212-33551281)
chr4 (344-413)||(42797743-42797812)
chr4 (344-413)||(52756686-52756755)
chr4 (328-406)||(40913246-40913321)
chr4 (347-407)||(46797739-46797799)
chr4 (345-413)||(47838667-47838735)
chr4 (344-407)||(26231588-26231651)
chr4 (344-413)||(7579321-7579390)
chr4 (344-413)||(41469816-41469885)
chr4 (345-413)||(41615726-41615794)
chr4 (344-405)||(51894640-51894701)
chr4 (345-413)||(3422073-3422140)
chr4 (344-413)||(25855094-25855163)
chr4 (344-408)||(29845656-29845720)
chr4 (344-411)||(17236839-17236907)
chr4 (344-387)||(4780371-4780414)
chr4 (348-405)||(50430476-50430533)
chr4 (325-387)||(24704446-24704505)
chr4 (344-379)||(42797816-42797851)
chr4 (344-389)||(5986950-5986995)
chr4 (344-401)||(6924746-6924802)
chr4 (347-404)||(17344227-17344284)
chr4 (329-379)||(3422144-3422191)
chr4 (347-387)||(32822285-32822325)
chr4 (329-379)||(41469765-41469812)
chr4 (329-379)||(47838616-47838663)
[»] scaffold0009 (2 HSPs)
scaffold0009 (344-413)||(49516-49585)
scaffold0009 (344-389)||(49579-49624)
[»] scaffold1707 (1 HSPs)
scaffold1707 (344-413)||(1346-1415)
[»] scaffold0482 (1 HSPs)
scaffold0482 (344-413)||(12871-12940)
[»] scaffold0204 (1 HSPs)
scaffold0204 (344-413)||(23796-23865)
[»] chr8 (35 HSPs)
chr8 (344-413)||(54662-54731)
chr8 (344-413)||(2890212-2890281)
chr8 (344-413)||(3304328-3304397)
chr8 (344-413)||(6552666-6552735)
chr8 (344-413)||(7785828-7785897)
chr8 (344-413)||(7805749-7805818)
chr8 (344-413)||(12343190-12343259)
chr8 (344-413)||(31654624-31654693)
chr8 (344-413)||(32114525-32114594)
chr8 (344-413)||(43199404-43199473)
chr8 (344-413)||(44498237-44498306)
chr8 (345-413)||(25601050-25601118)
chr8 (348-413)||(12763704-12763769)
chr8 (344-413)||(15888402-15888471)
chr8 (344-413)||(32211413-32211482)
chr8 (344-413)||(39571253-39571322)
chr8 (344-413)||(7012182-7012251)
chr8 (344-413)||(33289311-33289380)
chr8 (347-413)||(13578871-13578937)
chr8 (344-395)||(4245649-4245700)
chr8 (344-413)||(8587181-8587250)
chr8 (344-401)||(28463622-28463679)
chr8 (344-387)||(27422266-27422309)
chr8 (345-390)||(13246806-13246851)
chr8 (328-387)||(25600998-25601054)
chr8 (345-401)||(24692040-24692096)
chr8 (345-404)||(17006923-17006982)
chr8 (345-404)||(17570265-17570324)
chr8 (327-379)||(54609-54658)
chr8 (328-379)||(2890160-2890208)
chr8 (345-390)||(24203046-24203091)
chr8 (329-379)||(7785777-7785824)
chr8 (348-412)||(28999099-28999163)
chr8 (329-379)||(39571202-39571249)
chr8 (329-379)||(43199353-43199400)
[»] chr6 (30 HSPs)
chr6 (344-413)||(2830346-2830415)
chr6 (344-413)||(6330126-6330195)
chr6 (344-413)||(8383019-8383088)
chr6 (344-413)||(11572195-11572264)
chr6 (344-413)||(13853643-13853712)
chr6 (344-413)||(26602334-26602403)
chr6 (344-413)||(33052844-33052913)
chr6 (344-413)||(8099541-8099610)
chr6 (344-413)||(35031051-35031120)
chr6 (345-413)||(6143566-6143634)
chr6 (348-413)||(8417843-8417908)
chr6 (344-413)||(9644707-9644776)
chr6 (344-413)||(9650724-9650793)
chr6 (344-413)||(6068577-6068646)
chr6 (349-413)||(28747184-28747248)
chr6 (347-413)||(13043772-13043838)
chr6 (344-406)||(6068997-6069059)
chr6 (363-413)||(17992018-17992068)
chr6 (352-390)||(6549902-6549940)
chr6 (328-389)||(3788111-3788169)
chr6 (327-379)||(13853590-13853639)
chr6 (328-379)||(6330199-6330247)
chr6 (348-413)||(7597027-7597092)
chr6 (328-379)||(11572143-11572191)
chr6 (344-377)||(12473651-12473684)
chr6 (344-413)||(14936507-14936576)
chr6 (329-379)||(8099614-8099661)
chr6 (329-379)||(9644780-9644827)
chr6 (329-379)||(9650797-9650844)
chr6 (329-379)||(26602407-26602454)
[»] chr5 (28 HSPs)
chr5 (344-413)||(9395361-9395430)
chr5 (344-413)||(23359953-23360022)
chr5 (344-413)||(37149005-37149074)
chr5 (345-413)||(11795180-11795248)
chr5 (345-413)||(26350400-26350468)
chr5 (345-413)||(36563588-36563656)
chr5 (344-413)||(583000-583069)
chr5 (344-413)||(13033062-13033131)
chr5 (344-413)||(13103035-13103104)
chr5 (344-413)||(20848085-20848154)
chr5 (344-413)||(41989457-41989526)
chr5 (344-413)||(4443971-4444040)
chr5 (344-413)||(17025635-17025704)
chr5 (345-404)||(38361750-38361809)
chr5 (344-413)||(37641964-37642034)
chr5 (357-413)||(21575970-21576026)
chr5 (354-413)||(6126845-6126904)
chr5 (344-413)||(13539917-13539982)
chr5 (344-387)||(966224-966267)
chr5 (382-413)||(35904448-35904479)
chr5 (327-379)||(17025708-17025757)
chr5 (344-377)||(11574166-11574199)
chr5 (347-391)||(2366352-2366396)
chr5 (329-379)||(9395434-9395481)
chr5 (329-379)||(13103108-13103155)
chr5 (345-389)||(27081014-27081058)
chr5 (329-379)||(36563537-36563584)
chr5 (329-379)||(41989406-41989453)
[»] chr3 (36 HSPs)
chr3 (344-413)||(2787882-2787951)
chr3 (344-413)||(4238605-4238674)
chr3 (344-413)||(8817436-8817505)
chr3 (344-413)||(10297990-10298059)
chr3 (344-413)||(17653723-17653792)
chr3 (344-413)||(19557102-19557171)
chr3 (344-413)||(22721942-22722011)
chr3 (344-413)||(35513484-35513553)
chr3 (344-413)||(37508932-37509001)
chr3 (344-413)||(44785446-44785515)
chr3 (344-413)||(49823431-49823500)
chr3 (327-413)||(46208027-46208110)
chr3 (328-413)||(36095730-36095812)
chr3 (344-413)||(8437436-8437505)
chr3 (344-413)||(9111544-9111613)
chr3 (344-413)||(21295376-21295445)
chr3 (344-405)||(34080088-34080149)
chr3 (344-413)||(38964403-38964472)
chr3 (344-413)||(40691046-40691115)
chr3 (344-413)||(48340408-48340477)
chr3 (348-413)||(51406688-51406753)
chr3 (344-407)||(6013392-6013455)
chr3 (344-413)||(42507405-42507474)
chr3 (348-405)||(42170404-42170461)
chr3 (345-413)||(33942982-33943050)
chr3 (344-388)||(33128217-33128261)
chr3 (345-413)||(43323072-43323140)
chr3 (325-379)||(46208114-46208165)
chr3 (350-413)||(8951946-8952009)
chr3 (343-391)||(9213588-9213636)
chr3 (344-379)||(21295337-21295372)
chr3 (348-383)||(29285838-29285873)
chr3 (348-386)||(26001141-26001179)
chr3 (327-379)||(49823378-49823427)
chr3 (329-379)||(10298063-10298110)
chr3 (329-379)||(40690995-40691042)
[»] chr2 (35 HSPs)
chr2 (344-413)||(3055569-3055638)
chr2 (344-413)||(4683982-4684051)
chr2 (344-413)||(13197760-13197829)
chr2 (344-413)||(15896853-15896922)
chr2 (344-413)||(37990063-37990132)
chr2 (344-413)||(41478689-41478758)
chr2 (344-413)||(44397558-44397627)
chr2 (344-413)||(44398697-44398766)
chr2 (344-405)||(15372237-15372298)
chr2 (344-413)||(16044367-16044436)
chr2 (344-413)||(16243833-16243902)
chr2 (344-413)||(37666660-37666729)
chr2 (347-413)||(13344498-13344564)
chr2 (344-413)||(6648569-6648638)
chr2 (348-413)||(9047805-9047870)
chr2 (344-413)||(38917572-38917641)
chr2 (344-413)||(41492946-41493015)
chr2 (347-413)||(12337987-12338053)
chr2 (345-413)||(12170449-12170517)
chr2 (345-413)||(30099232-30099300)
chr2 (345-413)||(31150665-31150733)
chr2 (361-413)||(44804628-44804680)
chr2 (352-413)||(16734802-16734863)
chr2 (364-413)||(41453090-41453139)
chr2 (348-404)||(4553069-4553125)
chr2 (329-379)||(41492895-41492942)
chr2 (344-391)||(23227344-23227391)
chr2 (327-379)||(38917519-38917568)
chr2 (328-379)||(44398770-44398818)
chr2 (329-379)||(3055642-3055689)
chr2 (329-379)||(6648518-6648565)
chr2 (329-379)||(9047754-9047801)
chr2 (347-379)||(36089457-36089489)
chr2 (329-379)||(37990012-37990059)
chr2 (329-379)||(41478638-41478685)
[»] chr1 (31 HSPs)
chr1 (344-413)||(9981658-9981727)
chr1 (344-413)||(14984848-14984917)
chr1 (344-413)||(26471115-26471184)
chr1 (344-413)||(27159408-27159477)
chr1 (344-413)||(31842845-31842914)
chr1 (344-413)||(39402016-39402085)
chr1 (344-413)||(44668143-44668212)
chr1 (344-413)||(47216749-47216818)
chr1 (344-413)||(1050899-1050968)
chr1 (344-413)||(11795944-11796013)
chr1 (344-413)||(12483678-12483747)
chr1 (344-413)||(23278051-23278120)
chr1 (344-413)||(34042707-34042776)
chr1 (344-413)||(44955256-44955325)
chr1 (344-413)||(47777531-47777600)
chr1 (348-413)||(47588387-47588452)
chr1 (345-413)||(25694331-25694399)
chr1 (344-413)||(17556763-17556833)
chr1 (344-413)||(47969705-47969775)
chr1 (329-405)||(11897053-11897126)
chr1 (327-401)||(16448170-16448241)
chr1 (348-411)||(12213526-12213589)
chr1 (348-413)||(11989796-11989861)
chr1 (344-387)||(37552217-37552260)
chr1 (329-379)||(11897138-11897185)
chr1 (344-379)||(44955217-44955252)
chr1 (329-389)||(12483627-12483684)
chr1 (328-379)||(25694403-25694451)
chr1 (344-405)||(37552152-37552213)
chr1 (329-379)||(14984921-14984968)
chr1 (329-379)||(17556837-17556884)
[»] scaffold0464 (1 HSPs)
scaffold0464 (344-413)||(6181-6250)
[»] scaffold0415 (1 HSPs)
scaffold0415 (344-408)||(13781-13845)
[»] scaffold0650 (1 HSPs)
scaffold0650 (328-413)||(35-116)
[»] scaffold0011 (1 HSPs)
scaffold0011 (345-407)||(231359-231421)


Alignment Details
Target: chr7 (Bit Score: 98; Significance: 4e-48; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 39603525 - 39603658
Alignment:
Q  12 cacaaatttcttgttccataaataggtttcaaagctacaatttacaattcatacaatagacataaggaaaatataaacataaacacacatcctataaata 111  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||| |||||||||||||||| |||    
T  39603525 cacaaaattcttgttccatacataggtttcaaagctacaatttataattcatacaatagacataatgaaaatgtagacacaaacacacatcctatacata 39603624  T
Q  112 tattttgtgtagcaaaactcagcacctcaaaaac 145  Q
    |||||||||||| |||||||||||||||||||||    
T  39603625 tattttgtgtagaaaaactcagcacctcaaaaac 39603658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 1565848 - 1565779
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1565848 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 1565779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 1738566 - 1738497
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1738566 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 1738497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 7240760 - 7240829
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7240760 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 7240829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 9268767 - 9268836
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9268767 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 9268836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 31319518 - 31319449
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31319518 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 31319449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 38064032 - 38063963
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38064032 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 38063963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 46840871 - 46840940
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46840871 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 46840940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 23314258 - 23314195
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23314258 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 23314195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 22285698 - 22285779
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  22285698 atactccctccggtc---ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagataca 22285779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 94437 - 94368
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  94437 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagataca 94368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 7482236 - 7482305
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  7482236 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagataca 7482305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 28536870 - 28536801
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  28536870 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggaatgaatttttaactagataca 28536801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 36016315 - 36016246
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  36016315 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagataca 36016246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 36583406 - 36583475
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  36583406 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacttaatttttaactagataca 36583475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 38441471 - 38441540
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||    
T  38441471 gtcctatttataagagaaatttatgtcaacaaaagtgaatgtatttgaactgaatttttaactagataca 38441540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 4790259 - 4790328
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| |||||    
T  4790259 gtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaaatttttaactagataca 4790328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 413
Target Start/End: Original strand, 33418392 - 33418456
Alignment:
Q  349 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  33418392 atttttaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagataca 33418456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 9575420 - 9575489
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||| ||||||||| || ||||||||||||| || |||||| ||||||||||||||||| |||||    
T  9575420 gtcctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagataca 9575489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 40840238 - 40840169
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||| |||||||| ||| || ||||||| | |||||||||||||||||||||||||||| ||||    
T  40840238 gtcctatttagaagagaaagttaagttaacaaaaatcaatgtatttggactgaatttttaactaagtaca 40840169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 9268888 - 9268840
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  9268888 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 9268840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 39603663 - 39603700
Alignment:
Q  193 gcaaaaacaacaagatgcaagtacaacactcacttgta 230  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  39603663 gcaaaaacaaagagatgcaagtacaacactcacttgta 39603700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 1738446 - 1738493
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  1738446 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 1738493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 7240880 - 7240833
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  7240880 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 7240833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 7482356 - 7482309
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  7482356 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 7482309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 21827774 - 21827905
Alignment:
Q  19 ttcttgttccataaataggtttcaaagctacaatttacaattcatacaatagacataaggaaaatataaacataaacacac----atcctataaatatat 114  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||| ||||||||    |||||||| ||||||    
T  21827774 ttcttgttccatacataggtttcaaagctacaatttacagttcatacaatagacataaagaaaatgtagacacaaacacacatcgatcctatacatatat 21827873  T
Q  115 tttgtgtagc-aaaactcagcacctcaaaaac 145  Q
    |||||||||| |||| ||||||||||||||||    
T  21827874 tttgtgtagcaaaaaatcagcacctcaaaaac 21827905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 3372132 - 3372201
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3372132 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 3372201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 3904802 - 3904733
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3904802 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 3904733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 20538805 - 20538736
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  20538805 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 20538736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 24704381 - 24704450
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24704381 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 24704450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 47833622 - 47833691
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47833622 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 47833691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 48336274 - 48336343
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48336274 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 48336343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 53337381 - 53337450
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  53337381 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 53337450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 5986890 - 5986956
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  5986890 ctatttataagagaaatataggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 5986956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 33621810 - 33621876
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33621810 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 33621876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 329 - 413
Target Start/End: Original strand, 43900548 - 43900629
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  43900548 atactccctccggtc---ctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagataca 43900629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 3992987 - 3993056
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  3992987 gtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 3993056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 6122012 - 6121943
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  6122012 gtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagataca 6121943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 33551212 - 33551281
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  33551212 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagataca 33551281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 42797743 - 42797812
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42797743 gtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 42797812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 52756686 - 52756755
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  52756686 gtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagataca 52756755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 40913321 - 40913246
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact 406  Q
    ||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40913321 tatactccctccggtc---ctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaact 40913246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 347 - 407
Target Start/End: Original strand, 46797739 - 46797799
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46797739 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 46797799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 47838735 - 47838667
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  47838735 tcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 47838667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 407
Target Start/End: Original strand, 26231588 - 26231651
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 407  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  26231588 gtcctatttataagagaaatttaggtcaacaaaagcgaatgtatttggactgaatttttaacta 26231651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 7579321 - 7579390
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||    
T  7579321 gtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagataca 7579390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 41469885 - 41469816
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  41469885 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagataca 41469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 41615794 - 41615726
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  41615794 tcctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaataca 41615726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 344 - 405
Target Start/End: Complemental strand, 51894701 - 51894640
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaac 405  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  51894701 gtcctatttataagaaaaatttaggtcaacaaaagtgaatgtttttggactgaatttttaac 51894640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 3422073 - 3422140
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||    
T  3422073 tcctatttataagagaaatttaggtcaacaaaa-tgaatgtatttgaactgaatttttaactagataca 3422140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 25855094 - 25855163
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||| ||||||| ||  |||||||||||| ||||||||||||||||||||||||| |||||||    
T  25855094 gtcctatttatgagagaaagttgagtcaacaaaagttaatgtatttggactgaatttttaaccaaataca 25855163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 29845656 - 29845720
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaa 408  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||    
T  29845656 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaactaa 29845720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 411
Target Start/End: Complemental strand, 17236907 - 17236839
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgta-tttggactgaatttttaactaaata 411  Q
    ||||||||||||||| |||||| |||||||||||||  ||||| ||| ||||||||||||||| |||||    
T  17236907 gtcctatttataagaaaaatttgggtcaacaaaagttgatgtattttagactgaatttttaaccaaata 17236839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 4780414 - 4780371
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  4780414 gtcctatttataagagaaattttggtcaacaaaagttaatgtat 4780371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 50430533 - 50430476
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaac 405  Q
    |||||||||||| || || |||||||||||||  ||||||||||| ||||||||||||    
T  50430533 tatttataagagcaagttgggtcaacaaaagttgatgtatttggattgaatttttaac 50430476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 387
Target Start/End: Complemental strand, 24704505 - 24704446
Alignment:
Q  325 agttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||||||| ||   ||||||||||||||| ||| ||||||||||||| |||||||    
T  24704505 agttatactccctccgatc---ctatttataagagaattttgggtcaacaaaagttaatgtat 24704446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 379
Target Start/End: Complemental strand, 42797851 - 42797816
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||| |||||||||||||||||    
T  42797851 gtcctatttataagagaattttaggtcaacaaaagt 42797816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 5986995 - 5986950
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 389  Q
    |||||||||||||||||| ||| |||||||||||||  ||||||||    
T  5986995 gtcctatttataagagaattttgggtcaacaaaagttgatgtattt 5986950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 6924802 - 6924746
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttt 401  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||||||||| || ||||||    
T  6924802 gtcctatatataaga-aaagttaggtcaacaaaagttaatgtatttggtctaaatttt 6924746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 17344227 - 17344284
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 404  Q
    |||||||||||||||| |||  |||||||||||  |||||| || |||||||||||||    
T  17344227 ctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaa 17344284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 3422191 - 3422144
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  3422191 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 3422144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 387
Target Start/End: Complemental strand, 32822325 - 32822285
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||| |||||||||||||||||| || ||||||    
T  32822325 ctatttataagaaaaatttaggtcaacaaaaatggatgtat 32822285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 41469765 - 41469812
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  41469765 atactccctccggtc---ctatttataagagaatttttggtcaacaaaagt 41469812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 47838616 - 47838663
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  47838616 atactccctccggtc---ctatttataagagaatttttggtcaacaaaagt 47838663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 70; Significance: 2e-31; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 49516 - 49585
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49516 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 49585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 49624 - 49579
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 389  Q
    |||||||||||||||||| ||| |||||||||||||  ||||||||    
T  49624 gtcctatttataagagaattttgggtcaacaaaagttgatgtattt 49579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 1346 - 1415
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1346 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 1415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 12871 - 12940
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12871 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 12940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 23796 - 23865
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23796 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 23865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 5e-29; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 54731 - 54662
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  54731 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 54662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 2890281 - 2890212
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2890281 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 2890212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 3304397 - 3304328
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3304397 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 3304328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 6552666 - 6552735
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6552666 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 6552735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 7785897 - 7785828
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7785897 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 7785828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 7805818 - 7805749
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7805818 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 7805749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 12343259 - 12343190
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12343259 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 12343190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 31654624 - 31654693
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31654624 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 31654693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 32114594 - 32114525
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32114594 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 32114525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 43199473 - 43199404
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43199473 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 43199404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 44498306 - 44498237
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44498306 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 44498237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 25601118 - 25601050
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25601118 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 25601050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 12763769 - 12763704
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  12763769 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 12763704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 15888471 - 15888402
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  15888471 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagataca 15888402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 32211482 - 32211413
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  32211482 gtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagataca 32211413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 39571322 - 39571253
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  39571322 gtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagataca 39571253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 7012182 - 7012251
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||    
T  7012182 gtcctatttataagagaaatttagatcaacaaaagtgaatatatttggactgaatttttaactagataca 7012251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 33289380 - 33289311
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||    
T  33289380 gtcctatttataagagaaatttagatcaacataagtgaatgtatttggactgaatttttaactagataca 33289311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 13578871 - 13578937
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||    
T  13578871 ctatttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagataca 13578937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 4245700 - 4245649
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4245700 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 4245649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 8587181 - 8587250
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||| || |||||||||||||  |||||||| |||| |||||||||||| |||||    
T  8587181 gtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagataca 8587250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 28463622 - 28463679
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttt 401  Q
    ||||||||||||||||||| || |||||||||||||  ||||||||||||||||||||    
T  28463622 gtcctatttataagagaaagttgggtcaacaaaagttgatgtatttggactgaatttt 28463679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 27422309 - 27422266
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  27422309 gtcctatttataagagaaatttgggtcaacaaaaatgaatgtat 27422266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 13246806 - 13246851
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttg 390  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||    
T  13246806 tcctatttataagagaaatttggatcaacaaaaatgaatgtatttg 13246851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 25600998 - 25601054
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    ||||||||||||||||   ||||||||||||||| ||| ||||||||||||| |||||||    
T  25600998 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagttaatgtat 25601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 345 - 401
Target Start/End: Complemental strand, 24692096 - 24692040
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttt 401  Q
    |||||||||||||| ||| ||||||||||||||||  |||||| || ||||||||||    
T  24692096 tcctatttataagaaaaagttaggtcaacaaaagttgatgtatctgaactgaatttt 24692040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 17006923 - 17006982
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 404  Q
    |||||||||||||||||| || |||||||||||||  ||| || ||||||||||| ||||    
T  17006923 tcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaa 17006982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 17570324 - 17570265
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 404  Q
    |||||||||||||||||| || |||||||||||||  ||| || ||||||||||| ||||    
T  17570324 tcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaa 17570265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 54609 - 54658
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  54609 ttatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 54658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 2890160 - 2890208
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  2890160 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 2890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 345 - 390
Target Start/End: Complemental strand, 24203091 - 24203046
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttg 390  Q
    |||||||||||||||||||||| ||||| ||||||| || ||||||    
T  24203091 tcctatttataagagaaatttatgtcaataaaagtggatatatttg 24203046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 7785777 - 7785824
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  7785777 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 7785824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 412
Target Start/End: Complemental strand, 28999163 - 28999099
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatac 412  Q
    ||||||||| ||||| || ||||||||||| |  |||||| | ||||||||||||||||| ||||    
T  28999163 tatttataaaagaaagtttggtcaacaaaaattgatgtatctagactgaatttttaactacatac 28999099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 39571202 - 39571249
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  39571202 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 39571249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 43199353 - 43199400
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  43199353 atactccctccggtc---ctatttataagagaatttttggtcaacaaaagt 43199400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 5e-29; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 2830346 - 2830415
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2830346 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 2830415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 6330126 - 6330195
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6330126 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 6330195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 8383088 - 8383019
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8383088 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 8383019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 11572264 - 11572195
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11572264 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 11572195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 13853712 - 13853643
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13853712 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 13853643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 26602334 - 26602403
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26602334 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 26602403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 33052913 - 33052844
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33052913 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 33052844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 8099541 - 8099610
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  8099541 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagataca 8099610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 35031120 - 35031051
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35031120 gtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 35031051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 6143566 - 6143634
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  6143566 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagataca 6143634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 8417908 - 8417843
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  8417908 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagataca 8417843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 9644707 - 9644776
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  9644707 gtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagataca 9644776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 9650724 - 9650793
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  9650724 gtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagataca 9650793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 6068577 - 6068646
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| |||||    
T  6068577 gtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagataca 6068646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 349 - 413
Target Start/End: Complemental strand, 28747248 - 28747184
Alignment:
Q  349 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||    
T  28747248 atttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaattagataca 28747184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 13043772 - 13043838
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| |||||    
T  13043772 ctatttataagagaaatttaggtcaacaaaaatgaatgtatttgaattgaatttttaactagataca 13043838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 406
Target Start/End: Complemental strand, 6069059 - 6068997
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact 406  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||| || |||||||||||    
T  6069059 gtcctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaact 6068997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 363 - 413
Target Start/End: Original strand, 17992018 - 17992068
Alignment:
Q  363 tttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| |||||    
T  17992018 tttaggtcaataaaagtgaatgtatttggattgaatttttaactagataca 17992068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 352 - 390
Target Start/End: Original strand, 6549902 - 6549940
Alignment:
Q  352 tataagagaaatttaggtcaacaaaagtgaatgtatttg 390  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  6549902 tataagagaaatttaggtcaacaaaagttaatgtatttg 6549940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 3788169 - 3788111
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 389  Q
    |||||||||||||||| |   |||||||||| ||||||||||||||||||||  ||||||||    
T  3788169 tatactccctccggtctt---atttataagataaatttaggtcaacaaaagttgatgtattt 3788111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 13853590 - 13853639
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  13853590 ttatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 13853639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 6330247 - 6330199
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  6330247 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 6330199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 7597092 - 7597027
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||| ||  || |||||||||  ||||||  | ||||||||||||||||||||||    
T  7597092 tatttataagagaaagttgtgttaacaaaagttgatgtatccgaactgaatttttaactaaataca 7597027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 11572143 - 11572191
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  11572143 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 11572191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 377
Target Start/End: Original strand, 12473651 - 12473684
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaa 377  Q
    ||||||||||||||||||||||||||||| ||||    
T  12473651 gtcctatttataagagaaatttaggtcaataaaa 12473684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 14936576 - 14936507
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||| |||| ||||||||| |||  |||||||||||   |||| ||||||| |||||    
T  14936576 gtcctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagataca 14936507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 8099661 - 8099614
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  8099661 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 8099614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 9644827 - 9644780
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  9644827 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 9644780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 9650844 - 9650797
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  9650844 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 9650797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 26602454 - 26602407
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  26602454 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 26602407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 5e-29; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 9395361 - 9395430
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9395361 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 9395430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 23359953 - 23360022
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23359953 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 23360022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 37149074 - 37149005
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37149074 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 37149005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 11795180 - 11795248
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11795180 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 11795248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 26350468 - 26350400
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26350468 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 26350400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 36563656 - 36563588
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36563656 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 36563588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 583000 - 583069
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  583000 gtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagataca 583069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 13033062 - 13033131
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  13033062 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagataca 13033131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 13103035 - 13103104
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  13103035 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagataca 13103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 20848085 - 20848154
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  20848085 gtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagataca 20848154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 41989526 - 41989457
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41989526 gtcctatttgtaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 41989457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 4443971 - 4444040
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||    
T  4443971 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagataca 4444040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 17025635 - 17025704
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| |||||    
T  17025635 gtcctatttataagagaaatttaggtccacaaaagtgaatgtatttaaactgaatttttaactagataca 17025704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 38361809 - 38361750
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 404  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  38361809 tcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaa 38361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 37641964 - 37642034
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| |||||    
T  37641964 gtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagataca 37642034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 357 - 413
Target Start/End: Original strand, 21575970 - 21576026
Alignment:
Q  357 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  21575970 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagataca 21576026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 354 - 413
Target Start/End: Original strand, 6126845 - 6126904
Alignment:
Q  354 taagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||||||| |||||    
T  6126845 taagagaaatttagatcaacaaaaatgaatgtatttggactaaatttttaactagataca 6126904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 13539982 - 13539917
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||    |||  |||| ||||||||||||||||| |||||    
T  13539982 gtcctatttataagagaaatttaggtcaacaaa----aataaatttagactgaatttttaactagataca 13539917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 966267 - 966224
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||||||||||||| | ||||||||| |||||||||    
T  966267 gtcctatttataagagaaatttggatcaacaaaaatgaatgtat 966224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 382 - 413
Target Start/End: Original strand, 35904448 - 35904479
Alignment:
Q  382 atgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||    
T  35904448 atgtatttggactgaatttttaactaaataca 35904479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 17025757 - 17025708
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  17025757 ttatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 17025708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 377
Target Start/End: Complemental strand, 11574199 - 11574166
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaa 377  Q
    ||||||||||||||||| ||||||||||||||||    
T  11574199 gtcctatttataagagacatttaggtcaacaaaa 11574166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 2366352 - 2366396
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 391  Q
    ||||||||||||||||||| ||||||||| |||  ||||||||||    
T  2366352 ctatttataagagaaatttgggtcaacaagagttcatgtatttgg 2366396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 9395481 - 9395434
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  9395481 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 9395434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 13103155 - 13103108
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  13103155 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 13103108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 389
Target Start/End: Complemental strand, 27081058 - 27081014
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 389  Q
    ||||||||| |||||| ||||||||||||||||||  ||||||||    
T  27081058 tcctatttacaagagacatttaggtcaacaaaagttgatgtattt 27081014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 36563537 - 36563584
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  36563537 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 36563584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 41989406 - 41989453
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  41989406 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 41989453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 5e-29; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 2787951 - 2787882
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2787951 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 2787882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 4238605 - 4238674
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4238605 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 4238674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 8817505 - 8817436
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8817505 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 8817436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 10297990 - 10298059
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10297990 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 10298059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 17653723 - 17653792
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17653723 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 17653792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 19557171 - 19557102
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19557171 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 19557102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 22721942 - 22722011
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22721942 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 22722011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 35513484 - 35513553
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35513484 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 35513553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 37508932 - 37509001
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37508932 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 37509001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 44785515 - 44785446
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44785515 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 44785446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 49823500 - 49823431
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49823500 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 49823431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 327 - 413
Target Start/End: Original strand, 46208027 - 46208110
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  46208027 ttatactccctccggtc---ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagataca 46208110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 328 - 413
Target Start/End: Complemental strand, 36095812 - 36095730
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36095812 tatactccctccggtc---ctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 36095730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 8437436 - 8437505
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  8437436 gtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagataca 8437505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 9111613 - 9111544
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  9111613 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagataca 9111544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 21295445 - 21295376
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  21295445 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagataca 21295376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 405
Target Start/End: Complemental strand, 34080149 - 34080088
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaac 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34080149 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaac 34080088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 38964403 - 38964472
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  38964403 gtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagataca 38964472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 40691115 - 40691046
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  40691115 gtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagataca 40691046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 48340408 - 48340477
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48340408 gtcctatttacaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 48340477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 348 - 413
Target Start/End: Original strand, 51406688 - 51406753
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51406688 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 51406753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 6013455 - 6013392
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 407  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6013455 gtccaatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 6013392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 42507474 - 42507405
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  42507474 gtcctatttataatagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagataca 42507405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 348 - 405
Target Start/End: Complemental strand, 42170461 - 42170404
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaac 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42170461 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaac 42170404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 33943050 - 33942982
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  33943050 tcctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagataca 33942982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 33128217 - 33128261
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatt 388  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  33128217 gtcctaattataagagaaatttaggtcaacaaaagttaatgtatt 33128261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 43323072 - 43323140
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||| ||| || |||||||||||||  ||||||||||| | |||||||||| |||||||    
T  43323072 tcctatttataagaaaaaattgggtcaacaaaagttgatgtatttggattaaatttttaaccaaataca 43323140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 46208165 - 46208114
Alignment:
Q  325 agttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||||   ||||||||||||||| |||||||||||||||||    
T  46208165 agttatactccctccggtc---ctatttataagagaattttaggtcaacaaaagt 46208114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 413
Target Start/End: Complemental strand, 8952009 - 8951946
Alignment:
Q  350 tttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||| ||   || |||||||| ||||||||||||||||||||||||| |||||||    
T  8952009 tttataagagaaagttgaatcgacaaaagttaatgtatttggactgaatttttaacaaaataca 8951946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 9213636 - 9213588
Alignment:
Q  343 cgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 391  Q
    |||||||||||| |||||||||||||||||||||| |  ||||||||||    
T  9213636 cgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttgg 9213588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 379
Target Start/End: Original strand, 21295337 - 21295372
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||| |||||||||||||||||    
T  21295337 gtcctatttataagagaattttaggtcaacaaaagt 21295372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 383
Target Start/End: Complemental strand, 29285873 - 29285838
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaat 383  Q
    ||||||||||| ||||||||||||||||||||||||    
T  29285873 tatttataagataaatttaggtcaacaaaagtgaat 29285838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 386
Target Start/End: Complemental strand, 26001179 - 26001141
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgta 386  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  26001179 tatttataagagaaatttaagtcaacaaaagttaatgta 26001141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 49823378 - 49823427
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  49823378 ttatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 49823427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 10298110 - 10298063
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  10298110 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 10298063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 40690995 - 40691042
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  40690995 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 40691042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 5e-29; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 3055569 - 3055638
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3055569 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 3055638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 4684051 - 4683982
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4684051 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 4683982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 13197829 - 13197760
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13197829 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 13197760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 15896853 - 15896922
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15896853 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 15896922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 37990132 - 37990063
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37990132 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 37990063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 41478758 - 41478689
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41478758 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 41478689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 44397558 - 44397627
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44397558 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 44397627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 44398697 - 44398766
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44398697 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 44398766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 15372237 - 15372298
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaac 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15372237 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaac 15372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 16044436 - 16044367
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  16044436 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagataca 16044367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 16243902 - 16243833
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  16243902 gtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 16243833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 37666729 - 37666660
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  37666729 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagataca 37666660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 347 - 413
Target Start/End: Original strand, 13344498 - 13344564
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  13344498 ctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagataca 13344564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 6648638 - 6648569
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  6648638 gtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagataca 6648569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 9047870 - 9047805
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  9047870 tatttataagagaaatttaggtcaaaaaaagtgaatgtatttggactgaatttttaactagataca 9047805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 38917641 - 38917572
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  38917641 gtcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagataca 38917572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 41493015 - 41492946
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  41493015 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagataca 41492946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 347 - 413
Target Start/End: Complemental strand, 12338053 - 12337987
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  12338053 ctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagataca 12337987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 12170517 - 12170449
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||| |||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  12170517 tcctatttacaagagaaaattaggtcaataaaagttaatgtatttggactgaatttttaactaaataca 12170449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 30099300 - 30099232
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || |||||    
T  30099300 tcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggattgaatttttaattagataca 30099232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 31150665 - 31150733
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||| ||  ||||||||||||  ||||||||||||| |||||||||||| |||||    
T  31150665 tcctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca 31150733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 44804680 - 44804628
Alignment:
Q  361 aatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| |||||    
T  44804680 aatttaggtcaacataaatgaatgtatttggactgaatttttaactagataca 44804628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 352 - 413
Target Start/End: Original strand, 16734802 - 16734863
Alignment:
Q  352 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||| || |||||||||||||  |||||| ||||||||||||||||| |||||||    
T  16734802 tataagagaaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaataca 16734863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 364 - 413
Target Start/End: Original strand, 41453090 - 41453139
Alignment:
Q  364 ttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||| |||||| ||||||||||||||||||||||||| |||||||    
T  41453090 ttaggtcaataaaagttaatgtatttggactgaatttttaacaaaataca 41453139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 4553125 - 4553069
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 404  Q
    ||||||||||||||| || ||||||||||| |  ||||||||||| |||||||||||    
T  4553125 tatttataagagaaagtttggtcaacaaaaatagatgtatttggattgaatttttaa 4553069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 41492895 - 41492942
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||||||| |||||||||||||    
T  41492895 atactccctccggtc---ctatttataagagaaatttgggtcaacaaaagt 41492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 391
Target Start/End: Complemental strand, 23227391 - 23227344
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 391  Q
    ||||||||||||||||| |||| |||||||||||||  ||||||||||    
T  23227391 gtcctatttataagagacattttggtcaacaaaagttgatgtatttgg 23227344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 38917519 - 38917568
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  38917519 ttatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 38917568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 44398818 - 44398770
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  44398818 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 44398770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 3055689 - 3055642
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  3055689 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 3055642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 6648518 - 6648565
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  6648518 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 6648565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 9047754 - 9047801
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  9047754 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 9047801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 379
Target Start/End: Original strand, 36089457 - 36089489
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||| ||||||||||||||||||    
T  36089457 ctatttataagagatatttaggtcaacaaaagt 36089489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 37990012 - 37990059
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  37990012 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 37990059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 41478638 - 41478685
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  41478638 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 41478685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 9981658 - 9981727
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  9981658 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 9981727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 14984848 - 14984917
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14984848 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 14984917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 26471184 - 26471115
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26471184 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 26471115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 27159477 - 27159408
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27159477 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 27159408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 31842914 - 31842845
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  31842914 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 31842845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 39402085 - 39402016
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  39402085 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 39402016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 44668212 - 44668143
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44668212 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 44668143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 47216818 - 47216749
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47216818 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 47216749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 1050899 - 1050968
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  1050899 gtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagataca 1050968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 11795944 - 11796013
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  11795944 gtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagataca 11796013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 12483747 - 12483678
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  12483747 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaataca 12483678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 23278120 - 23278051
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  23278120 gtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagataca 23278051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 34042707 - 34042776
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  34042707 gtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagataca 34042776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 44955325 - 44955256
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44955325 gtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagataca 44955256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 47777600 - 47777531
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  47777600 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagataca 47777531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 348 - 413
Target Start/End: Complemental strand, 47588452 - 47588387
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  47588452 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagataca 47588387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 25694331 - 25694399
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| |||||    
T  25694331 tcctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagataca 25694399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 17556763 - 17556833
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaag-tgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  17556763 gtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagataca 17556833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 344 - 413
Target Start/End: Original strand, 47969705 - 47969775
Alignment:
Q  344 gtcctatttataa-gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||    
T  47969705 gtcctatttataaagagaaatttaggtcaacaaaagtaaatgtatttagactgaatttttaactagataca 47969775  T

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Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 11897053 - 11897126
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaac 405  Q
    |||||||||||||||   |||||||||||||||| ||||||||||||||||  |||||| || ||||||||||||||    
T  11897053 atactccctccggtc---ctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaac 11897126  T

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Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 401
Target Start/End: Complemental strand, 16448241 - 16448170
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttt 401  Q
    |||||||||||||||||   |||||||||||||||| || |||||||||||||  |||||| |||||||||||||    
T  16448241 ttatactccctccggtc---ctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaatttt 16448170  T

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Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 12213589 - 12213526
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaata 411  Q
    ||||||||||||||  |||||||||||||| | ||||||||| || ||||||||||||||||||    
T  12213589 tatttataagagaatgttaggtcaacaaaaattaatgtatttagattgaatttttaactaaata 12213526  T

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Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 348 - 413
Target Start/End: Original strand, 11989796 - 11989861
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    ||||||||||||||| || |||||||||||   ||| ||||||||||||||||||||| |||||||    
T  11989796 tatttataagagaaagttgggtcaacaaaaactaatatatttggactgaatttttaaccaaataca 11989861  T

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Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 37552260 - 37552217
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  37552260 gtcctatttataagagaaatttgggtcaacaaaaatgaatgtat 37552217  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 11897185 - 11897138
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||||||| |||||||||||||    
T  11897185 atactccctccggtc---ctatttataagagaaatttgggtcaacaaaagt 11897138  T

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Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 379
Target Start/End: Original strand, 44955217 - 44955252
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||| |||||||||||||||||    
T  44955217 gtcctatttataagagaattttaggtcaacaaaagt 44955252  T

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Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 12483627 - 12483684
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 389  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||  ||||||||    
T  12483627 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagttgatgtattt 12483684  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 25694451 - 25694403
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  25694451 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 25694403  T

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Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 405
Target Start/End: Original strand, 37552152 - 37552213
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaac 405  Q
    ||||||||||||||| ||| ||  |||||||| |||  |||||| |||||||||||||||||    
T  37552152 gtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaac 37552213  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 14984968 - 14984921
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  14984968 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 14984921  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 17556884 - 17556837
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   |||||||||||||||| || |||||||||||||    
T  17556884 atactccctccggtc---ctatttataagagaaacttgggtcaacaaaagt 17556837  T

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Target: scaffold0464 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 344 - 413
Target Start/End: Complemental strand, 6250 - 6181
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  6250 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatgtggactgaatttttaactagataca 6181  T

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Target: scaffold0415 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 13845 - 13781
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaa 408  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||    
T  13845 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaactaa 13781  T

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Target: scaffold0650 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 413
Target Start/End: Complemental strand, 116 - 35
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||    ||||||||| ||||||  | |||||||||||||  ||||||||||||| |||||||||| |||||||    
T  116 tatactccctccggtt---ctatttata-gagaaagattggtcaacaaaagttgatgtatttggactaaatttttaaccaaataca 35  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 407
Target Start/End: Complemental strand, 231421 - 231359
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 407  Q
    ||||| |||||||||||| || | |||||||||||  |||||| ||||||||||||| |||||    
T  231421 tcctaattataagagaaagttggatcaacaaaagtttatgtatctggactgaattttgaacta 231359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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