View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4458_high_23 (Length: 362)
Name: NF4458_high_23
Description: NF4458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4458_high_23 |
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Alignment Details
Target: chr1 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 9 - 344
Target Start/End: Complemental strand, 51112245 - 51111911
Alignment:
| Q |
9 |
agcagagatgattcaaatatataagaatgaatgggcatgaaactcaaaatatgaaagacgacgggcttcttttgaagtcttgaatccttcaatgtttttg |
108 |
Q |
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| T |
51112245 |
agcagaaatgattcaaatatataagaatgaatgggcatgaaactcaaaatatgaaagacgacgggcttcttttgaagtct-gaacccttcaatgtttttg |
51112147 |
T |
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| Q |
109 |
agtccgagtcggatcacatcaagagtctagtttaaaattaatgttttgatcaagaattgaagtgtgagataatttttcgtctatctagagtagtaaaata |
208 |
Q |
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| T |
51112146 |
agtccgagtcgaatcacattaagaatctagtttaaaattaatgttttgat-aagaattgaagtgtgagataatttttcgtctatctagagtagtaaaata |
51112048 |
T |
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| Q |
209 |
ataataaaattaagtgaaatcatattaaaactagtgtcaaccttgaagtagttattggaa-aaaatacaactgcacccaataaagcaacgttaagaattg |
307 |
Q |
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| T |
51112047 |
ataataaaattaagtgaaatcatattaaaactagtgtcaaccttgaagtagttattggaaaaaaatacaactgcacccaataaagcaacgttaagaattg |
51111948 |
T |
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| Q |
308 |
acacagtaccaataaatataatttcacactctcagct |
344 |
Q |
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| T |
51111947 |
acacagtaccaataaatataatttcacactctcagct |
51111911 |
T |
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