View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4458_high_27 (Length: 327)
Name: NF4458_high_27
Description: NF4458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4458_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 31583108 - 31582803
Alignment:
| Q |
1 |
ttgcaaggactatgtccaacaaaacttgtcaacacaacattagaccctgacctctttgtttatggtcctgactacaataatcttacactcttctatggtt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31583108 |
ttgcaaggactatgtccaacaaaacttgtcaacacaacattagaccccgacctctttgtttatggtcctgactacaataatcttacactcttctatggtt |
31583009 |
T |
|
| Q |
101 |
gtccaccttcaattaatttccctttgaacgggcgctttctatgtccttcaaatggatattctgatgaatttgtttatacttggtttgggtctaatcttga |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
31583008 |
gtccaccttcaattactttccctttgaacgggcgctttctatgtccttcaaatggatattctgatgaatttgtttatacttggtttgggtataatcttga |
31582909 |
T |
|
| Q |
201 |
ccctcaagctttttcatgccgagaaagtatggttgttccagtcttgaattcgttgattgctgttggtgatttgactagaatacgaagtgcaatcggaggt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31582908 |
tcctcaagctttttcatgccgagaaagtatggttgttccagtcttgaattcgttgattgctgttggtgatttgactagaatacgaagtgcaatcggaggt |
31582809 |
T |
|
| Q |
301 |
ggattt |
306 |
Q |
| |
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| |||| |
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| T |
31582808 |
gaattt |
31582803 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 1 - 306
Target Start/End: Complemental strand, 31641714 - 31641409
Alignment:
| Q |
1 |
ttgcaaggactatgtccaacaaaacttgtcaacacaacattagaccctgacctctttgtttatggtcctgactacaataatcttacactcttctatggtt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31641714 |
ttgcaaggactatgtccaacaaaacttgtcaacacaacattagaccccgacctctttgtttatggtcctgactacaataatcttacactcttctatggtt |
31641615 |
T |
|
| Q |
101 |
gtccaccttcaattaatttccctttgaacgggcgctttctatgtccttcaaatggatattctgatgaatttgtttatacttggtttgggtctaatcttga |
200 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
31641614 |
gtccaccttcaattactttccctttgaacgggcgctttctatgtccttcaaatggatattctgatgaatttgtttatacttggtttgggtataatcttga |
31641515 |
T |
|
| Q |
201 |
ccctcaagctttttcatgccgagaaagtatggttgttccagtcttgaattcgttgattgctgttggtgatttgactagaatacgaagtgcaatcggaggt |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31641514 |
tcctcaagctttttcatgccgagaaagtatggttgttccagtcttgaattcgttgattgctgttggtgatttgactagaatacgaagtgcaatcggaggt |
31641415 |
T |
|
| Q |
301 |
ggattt |
306 |
Q |
| |
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| |||| |
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|
| T |
31641414 |
gaattt |
31641409 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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