View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4458_high_37 (Length: 269)
Name: NF4458_high_37
Description: NF4458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4458_high_37 |
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Alignment Details
Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 43170172 - 43170023
Alignment:
| Q |
1 |
atgtggttataagtattttgattttctaatatgctgccttgtataaattagaaaatagactagttacataatttgaagtaagttactagcgagctgcaag |
100 |
Q |
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| T |
43170172 |
atgtggttataagtatttttattttctaatatgctgtcttgtataaattagaaaatagattagttacataatttgaagtaagttactagcgagctgcaag |
43170073 |
T |
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| Q |
101 |
tttgacagtgtcactgatttgctatttgattaaat-ttttacactctatt |
149 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
43170072 |
tttgacagtgtcactgatttgctatttgattaaattttttacactctatt |
43170023 |
T |
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