View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4458_low_23 (Length: 392)

Name: NF4458_low_23
Description: NF4458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4458_low_23
NF4458_low_23
[»] chr7 (40 HSPs)
chr7 (18-119)||(45152811-45152912)
chr7 (187-290)||(45149713-45149816)
chr7 (187-294)||(8267743-8267849)
chr7 (187-294)||(46474127-46474234)
chr7 (187-294)||(28390438-28390544)
chr7 (187-294)||(9723822-9723928)
chr7 (117-191)||(45152427-45152501)
chr7 (185-294)||(15358923-15359031)
chr7 (187-294)||(13448842-13448948)
chr7 (185-291)||(20583567-20583672)
chr7 (187-291)||(28722239-28722342)
chr7 (187-291)||(38424348-38424451)
chr7 (187-291)||(14935489-14935592)
chr7 (187-291)||(15363082-15363185)
chr7 (188-291)||(4484856-4484958)
chr7 (187-270)||(9319578-9319661)
chr7 (185-267)||(9611460-9611542)
chr7 (185-267)||(9839031-9839113)
chr7 (188-294)||(33559773-33559878)
chr7 (185-267)||(48356796-48356878)
chr7 (187-291)||(4446341-4446444)
chr7 (187-291)||(8563362-8563466)
chr7 (187-294)||(17947607-17947713)
chr7 (185-284)||(31501309-31501407)
chr7 (185-267)||(16914941-16915023)
chr7 (187-291)||(4438912-4439015)
chr7 (185-267)||(34241220-34241302)
chr7 (185-270)||(14271912-14271997)
chr7 (185-291)||(14940884-14940986)
chr7 (185-291)||(15368477-15368579)
chr7 (185-255)||(13377693-13377763)
chr7 (185-255)||(49047687-49047757)
chr7 (193-253)||(39291538-39291598)
chr7 (193-255)||(15977870-15977932)
chr7 (185-255)||(17223951-17224021)
chr7 (187-228)||(9250630-9250671)
chr7 (200-233)||(17947546-17947579)
chr7 (185-255)||(13274941-13275011)
chr7 (193-255)||(44305034-44305096)
chr7 (190-255)||(13037048-13037112)
[»] chr3 (41 HSPs)
chr3 (187-294)||(10913011-10913118)
chr3 (187-290)||(38375711-38375814)
chr3 (185-290)||(15517760-15517865)
chr3 (187-274)||(8604970-8605057)
chr3 (187-290)||(31412348-31412450)
chr3 (185-291)||(14814778-14814883)
chr3 (185-294)||(6228638-6228746)
chr3 (187-294)||(50313313-50313419)
chr3 (202-294)||(43427546-43427637)
chr3 (188-294)||(41661691-41661796)
chr3 (185-294)||(4145827-4145934)
chr3 (185-274)||(13301482-13301571)
chr3 (185-274)||(13312138-13312227)
chr3 (185-294)||(4162218-4162326)
chr3 (185-274)||(11882231-11882320)
chr3 (185-266)||(34560052-34560133)
chr3 (193-290)||(33368948-33369044)
chr3 (187-290)||(11515505-11515609)
chr3 (193-291)||(11402718-11402816)
chr3 (193-291)||(12539090-12539188)
chr3 (185-255)||(12953128-12953198)
chr3 (222-290)||(11638487-11638554)
chr3 (188-267)||(9590770-9590849)
chr3 (185-255)||(3576451-3576521)
chr3 (185-255)||(17191705-17191775)
chr3 (185-255)||(17204845-17204915)
chr3 (185-255)||(47784779-47784849)
chr3 (185-271)||(17139656-17139742)
chr3 (185-255)||(39656690-39656760)
chr3 (193-291)||(15550726-15550824)
chr3 (185-255)||(30207380-30207450)
chr3 (193-255)||(48421741-48421803)
chr3 (208-255)||(12488762-12488809)
chr3 (188-255)||(14080673-14080740)
chr3 (209-291)||(1990931-1991012)
chr3 (185-270)||(14059226-14059311)
chr3 (219-255)||(14177065-14177101)
chr3 (185-255)||(16880287-16880357)
chr3 (193-291)||(18970049-18970147)
chr3 (188-222)||(21167097-21167131)
chr3 (185-246)||(15876241-15876302)
[»] scaffold0022 (4 HSPs)
scaffold0022 (187-294)||(67972-68079)
scaffold0022 (187-294)||(131941-132047)
scaffold0022 (188-253)||(109756-109821)
scaffold0022 (185-255)||(102935-103005)
[»] chr6 (36 HSPs)
chr6 (187-294)||(23222877-23222983)
chr6 (187-294)||(22462112-22462218)
chr6 (187-294)||(23222042-23222148)
chr6 (186-291)||(19672415-19672519)
chr6 (186-287)||(31467611-31467712)
chr6 (187-294)||(19854281-19854387)
chr6 (187-290)||(17013654-17013756)
chr6 (187-294)||(34966993-34967099)
chr6 (185-292)||(18629621-18629727)
chr6 (187-290)||(19175280-19175383)
chr6 (191-290)||(21931333-21931432)
chr6 (185-291)||(22848144-22848249)
chr6 (185-267)||(17557031-17557112)
chr6 (185-294)||(17083211-17083318)
chr6 (187-290)||(16136392-16136495)
chr6 (188-294)||(32352173-32352278)
chr6 (195-267)||(25651389-25651461)
chr6 (185-255)||(22361778-22361848)
chr6 (185-291)||(29605579-29605683)
chr6 (212-294)||(29160343-29160424)
chr6 (188-294)||(33538386-33538490)
chr6 (185-255)||(18381696-18381766)
chr6 (185-255)||(21623332-21623402)
chr6 (193-255)||(22585575-22585637)
chr6 (193-255)||(22590406-22590468)
chr6 (185-271)||(28195106-28195192)
chr6 (185-269)||(18399088-18399172)
chr6 (191-255)||(33324857-33324920)
chr6 (191-255)||(35136032-35136095)
chr6 (188-255)||(16887808-16887875)
chr6 (193-255)||(15889735-15889797)
chr6 (194-255)||(25640585-25640646)
chr6 (194-291)||(26512270-26512367)
chr6 (194-291)||(26517386-26517483)
chr6 (194-291)||(26089863-26089960)
chr6 (187-216)||(29158399-29158428)
[»] chr8 (40 HSPs)
chr8 (187-294)||(22497224-22497330)
chr8 (187-294)||(24552585-24552691)
chr8 (187-294)||(18261486-18261592)
chr8 (187-294)||(33172354-33172460)
chr8 (187-294)||(45558952-45559058)
chr8 (186-294)||(22742890-22742997)
chr8 (187-293)||(45465141-45465246)
chr8 (187-294)||(16002123-16002230)
chr8 (187-287)||(18041547-18041646)
chr8 (185-267)||(15933450-15933532)
chr8 (187-285)||(38635663-38635760)
chr8 (185-294)||(37653629-37653737)
chr8 (185-267)||(26011646-26011728)
chr8 (187-290)||(22887893-22887993)
chr8 (185-294)||(33528551-33528659)
chr8 (185-255)||(5854778-5854848)
chr8 (195-291)||(19331340-19331432)
chr8 (194-290)||(18118311-18118407)
chr8 (185-244)||(27233103-27233162)
chr8 (185-267)||(23149930-23150013)
chr8 (188-255)||(25296322-25296389)
chr8 (188-255)||(25758342-25758409)
chr8 (185-255)||(17285368-17285438)
chr8 (185-255)||(21198165-21198235)
chr8 (185-255)||(23151846-23151916)
chr8 (185-267)||(23158312-23158395)
chr8 (193-291)||(21259520-21259618)
chr8 (185-255)||(23837362-23837432)
chr8 (188-270)||(29306566-29306648)
chr8 (188-252)||(23226092-23226156)
chr8 (188-267)||(33611069-33611148)
chr8 (185-255)||(22981437-22981507)
chr8 (185-271)||(38533797-38533883)
chr8 (211-270)||(15969970-15970029)
chr8 (193-255)||(17502325-17502387)
chr8 (193-255)||(20175795-20175857)
chr8 (193-255)||(20220522-20220584)
chr8 (193-253)||(4234021-4234081)
chr8 (219-291)||(16038936-16039008)
chr8 (193-253)||(23218043-23218103)
[»] chr5 (29 HSPs)
chr5 (187-294)||(23417367-23417474)
chr5 (187-294)||(16835314-16835420)
chr5 (190-294)||(21109876-21109979)
chr5 (185-291)||(22885771-22885876)
chr5 (188-294)||(26559831-26559936)
chr5 (187-294)||(23234500-23234606)
chr5 (185-294)||(24084203-24084311)
chr5 (185-294)||(29918091-29918199)
chr5 (187-247)||(19873933-19873993)
chr5 (188-270)||(21310725-21310807)
chr5 (191-294)||(11763523-11763626)
chr5 (185-255)||(21222621-21222691)
chr5 (188-270)||(21297191-21297273)
chr5 (188-294)||(37983490-37983595)
chr5 (185-255)||(23981529-23981599)
chr5 (185-254)||(21617181-21617250)
chr5 (185-291)||(6456753-6456855)
chr5 (185-255)||(19862373-19862443)
chr5 (185-255)||(5450856-5450926)
chr5 (185-270)||(432612-432697)
chr5 (183-237)||(3674044-3674098)
chr5 (239-294)||(24225383-24225438)
chr5 (209-255)||(7728584-7728630)
chr5 (219-255)||(22662730-22662766)
chr5 (185-269)||(32966162-32966246)
chr5 (185-244)||(28902366-28902425)
chr5 (185-244)||(28938761-28938820)
chr5 (188-222)||(5621810-5621844)
chr5 (185-235)||(16595691-16595741)
[»] chr1 (23 HSPs)
chr1 (187-294)||(20194150-20194258)
chr1 (187-294)||(33397478-33397584)
chr1 (187-294)||(40436284-40436390)
chr1 (187-294)||(5768184-5768290)
chr1 (187-294)||(25093985-25094091)
chr1 (185-290)||(52400761-52400865)
chr1 (186-290)||(8537924-8538027)
chr1 (186-290)||(8603163-8603266)
chr1 (187-294)||(49997296-49997402)
chr1 (185-291)||(21195143-21195248)
chr1 (187-255)||(37233875-37233943)
chr1 (185-255)||(17609092-17609162)
chr1 (185-270)||(19603246-19603331)
chr1 (188-255)||(22143377-22143444)
chr1 (185-255)||(13376872-13376942)
chr1 (185-255)||(20177339-20177409)
chr1 (185-247)||(20955452-20955514)
chr1 (185-271)||(51627677-51627763)
chr1 (258-294)||(76458-76494)
chr1 (186-270)||(38033688-38033772)
chr1 (185-244)||(16656813-16656872)
chr1 (185-247)||(22829438-22829500)
chr1 (185-247)||(27674968-27675030)
[»] scaffold0561 (1 HSPs)
scaffold0561 (187-294)||(2787-2893)
[»] scaffold0148 (1 HSPs)
scaffold0148 (187-294)||(37684-37790)
[»] chr2 (23 HSPs)
chr2 (187-294)||(18536881-18536988)
chr2 (187-294)||(25595146-25595252)
chr2 (187-294)||(9636871-9636977)
chr2 (185-290)||(24087400-24087505)
chr2 (187-290)||(16292816-16292918)
chr2 (187-294)||(24277887-24277993)
chr2 (194-290)||(20279540-20279636)
chr2 (185-275)||(19660024-19660114)
chr2 (188-294)||(24884812-24884917)
chr2 (192-255)||(19666692-19666755)
chr2 (185-255)||(68156-68226)
chr2 (117-190)||(38256247-38256320)
chr2 (188-254)||(19669125-19669191)
chr2 (185-270)||(722540-722625)
chr2 (185-253)||(43646059-43646127)
chr2 (239-294)||(6094842-6094896)
chr2 (185-255)||(22775218-22775288)
chr2 (185-255)||(22780596-22780666)
chr2 (185-237)||(31146194-31146246)
chr2 (185-240)||(23821652-23821707)
chr2 (185-240)||(23830731-23830786)
chr2 (219-274)||(28031293-28031348)
chr2 (187-217)||(6094888-6094918)
[»] scaffold0153 (1 HSPs)
scaffold0153 (190-294)||(8616-8719)
[»] scaffold0670 (1 HSPs)
scaffold0670 (187-294)||(7690-7796)
[»] scaffold0601 (1 HSPs)
scaffold0601 (187-281)||(895-989)
[»] scaffold0165 (2 HSPs)
scaffold0165 (188-294)||(22125-22230)
scaffold0165 (188-294)||(30090-30195)
[»] scaffold0387 (1 HSPs)
scaffold0387 (185-294)||(975-1083)
[»] scaffold0598 (1 HSPs)
scaffold0598 (187-294)||(3377-3483)
[»] scaffold0406 (1 HSPs)
scaffold0406 (187-294)||(14162-14268)
[»] scaffold0065 (1 HSPs)
scaffold0065 (187-290)||(67912-68014)
[»] scaffold0020 (1 HSPs)
scaffold0020 (187-294)||(108135-108241)
[»] chr4 (24 HSPs)
chr4 (187-294)||(13590089-13590195)
chr4 (187-294)||(18238172-18238278)
chr4 (187-294)||(54398509-54398615)
chr4 (187-294)||(13442691-13442797)
chr4 (187-294)||(47468363-47468469)
chr4 (191-294)||(50219959-50220061)
chr4 (187-270)||(40904949-40905032)
chr4 (185-255)||(7964725-7964795)
chr4 (187-294)||(41916741-41916847)
chr4 (185-291)||(38764838-38764943)
chr4 (185-291)||(41256383-41256487)
chr4 (185-270)||(7185857-7185942)
chr4 (185-291)||(15013296-15013400)
chr4 (188-255)||(18276598-18276665)
chr4 (185-255)||(47535078-47535148)
chr4 (194-291)||(21417435-21417532)
chr4 (185-271)||(13809523-13809609)
chr4 (185-255)||(15044992-15045062)
chr4 (185-255)||(15109362-15109432)
chr4 (193-291)||(19559487-19559585)
chr4 (185-255)||(41165959-41166029)
chr4 (185-237)||(52265521-52265573)
chr4 (193-255)||(49071851-49071913)
chr4 (219-255)||(34177695-34177731)
[»] scaffold0193 (1 HSPs)
scaffold0193 (185-294)||(4731-4839)
[»] scaffold0133 (1 HSPs)
scaffold0133 (187-290)||(25476-25578)
[»] scaffold0004 (2 HSPs)
scaffold0004 (187-294)||(27623-27729)
scaffold0004 (187-294)||(86483-86589)
[»] scaffold0049 (1 HSPs)
scaffold0049 (187-294)||(33428-33535)
[»] scaffold0025 (2 HSPs)
scaffold0025 (185-291)||(85662-85766)
scaffold0025 (189-266)||(53499-53576)
[»] scaffold0253 (2 HSPs)
scaffold0253 (185-290)||(7532-7636)
scaffold0253 (185-290)||(16957-17061)
[»] scaffold0231 (1 HSPs)
scaffold0231 (193-294)||(12754-12855)
[»] scaffold0080 (2 HSPs)
scaffold0080 (185-294)||(23685-23793)
scaffold0080 (185-255)||(43811-43881)
[»] scaffold0700 (1 HSPs)
scaffold0700 (185-255)||(2689-2759)
[»] scaffold0031 (1 HSPs)
scaffold0031 (185-267)||(97211-97293)
[»] scaffold0010 (1 HSPs)
scaffold0010 (185-267)||(31172-31254)
[»] scaffold0077 (1 HSPs)
scaffold0077 (185-270)||(6693-6778)
[»] scaffold0057 (1 HSPs)
scaffold0057 (193-291)||(6011-6109)
[»] scaffold0053 (1 HSPs)
scaffold0053 (185-255)||(76860-76930)
[»] scaffold0006 (1 HSPs)
scaffold0006 (185-267)||(197266-197348)
[»] scaffold0483 (1 HSPs)
scaffold0483 (185-255)||(6825-6895)
[»] scaffold0409 (2 HSPs)
scaffold0409 (188-270)||(1364-1446)
scaffold0409 (188-270)||(9619-9701)
[»] scaffold0081 (1 HSPs)
scaffold0081 (185-255)||(1349-1418)
[»] scaffold0009 (1 HSPs)
scaffold0009 (185-267)||(69609-69691)
[»] scaffold0634 (1 HSPs)
scaffold0634 (185-236)||(5595-5646)
[»] scaffold0151 (1 HSPs)
scaffold0151 (188-263)||(22438-22513)
[»] scaffold0123 (1 HSPs)
scaffold0123 (188-255)||(8174-8241)
[»] scaffold0521 (1 HSPs)
scaffold0521 (185-255)||(11258-11328)
[»] scaffold0243 (1 HSPs)
scaffold0243 (185-255)||(2329-2399)
[»] scaffold0130 (1 HSPs)
scaffold0130 (185-233)||(27003-27051)
[»] scaffold1295 (1 HSPs)
scaffold1295 (193-255)||(270-332)
[»] scaffold0507 (1 HSPs)
scaffold0507 (193-255)||(1530-1592)
[»] scaffold0162 (1 HSPs)
scaffold0162 (185-255)||(7038-7108)
[»] scaffold0150 (1 HSPs)
scaffold0150 (185-255)||(28700-28770)
[»] scaffold0028 (1 HSPs)
scaffold0028 (188-254)||(79704-79770)
[»] scaffold0456 (2 HSPs)
scaffold0456 (188-253)||(1562-1627)
scaffold0456 (188-253)||(8707-8772)
[»] scaffold0017 (1 HSPs)
scaffold0017 (209-294)||(12891-12976)
[»] scaffold0138 (1 HSPs)
scaffold0138 (195-255)||(22452-22512)
[»] scaffold0032 (1 HSPs)
scaffold0032 (188-255)||(104639-104706)
[»] scaffold0063 (1 HSPs)
scaffold0063 (193-255)||(44143-44205)
[»] scaffold0013 (2 HSPs)
scaffold0013 (189-255)||(35642-35708)
scaffold0013 (219-255)||(7125-7161)
[»] scaffold0389 (1 HSPs)
scaffold0389 (188-255)||(10826-10893)
[»] scaffold0118 (1 HSPs)
scaffold0118 (219-274)||(34467-34522)
[»] scaffold0058 (1 HSPs)
scaffold0058 (188-255)||(70323-70389)
[»] scaffold0026 (1 HSPs)
scaffold0026 (188-255)||(89880-89946)
[»] scaffold0079 (1 HSPs)
scaffold0079 (195-285)||(3872-3962)
[»] scaffold0047 (1 HSPs)
scaffold0047 (196-253)||(19959-20016)
[»] scaffold0317 (1 HSPs)
scaffold0317 (219-255)||(12650-12686)
[»] scaffold0016 (1 HSPs)
scaffold0016 (185-233)||(116571-116619)


Alignment Details
Target: chr7 (Bit Score: 102; Significance: 1e-50; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 45152912 - 45152811
Alignment:
Q  18 agaatcgtcatttaaaagttaagctgaaatattataacatttatttcatcatttaaaaatatgttttcttcaaattattattttgggtacattataattc 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45152912 agaatcgtcatttaaaagttaagctgaaatattataacatttatttcatcatttaaaaatatgttttcttcaaattattattttgggtacattataattc 45152813  T
Q  118 ca 119  Q
    ||    
T  45152812 ca 45152811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 45149816 - 45149713
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45149816 ttataatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 45149717  T
Q  287 tgct 290  Q
    ||||    
T  45149716 tgct 45149713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 8267743 - 8267849
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| | ||||||||||||||    
T  8267743 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 8267841  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  8267842 tgctctaa 8267849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 46474234 - 46474127
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||    
T  46474234 ttatgatgatatgttagagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcataatatgtggaaatgtgtatattgttaattg 46474135  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  46474134 tgctctaa 46474127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 28390544 - 28390438
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||||||    
T  28390544 ttatgatgttatgtttgagtacatgaaattggtgataattaaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-ggtatattgtgaattg 28390446  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  28390445 tgctctaa 28390438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 9723822 - 9723928
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||| | ||||||||||||||    
T  9723822 ttatgatgatatgtttgggtacatgaaattggtgataattcaattgatgttgatgaaactgcatgttcataatatgtgaaaat-gatatattgtgaattg 9723920  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  9723921 tgctctaa 9723928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 45152501 - 45152427
Alignment:
Q  117 ccatgtttggatgttgtataatcatgtcctgcacatccagcaacaaagccagccacactagccgtgcaaattatg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45152501 ccatgtttggatgttgtataatcatgtcctgcacatccagcaacaaagccagccacactagccgtgcaaattatg 45152427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 15359031 - 15358923
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  15359031 aattatggtgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 15358933  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  15358932 tgtgctctaa 15358923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 13448842 - 13448948
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  13448842 ttatcatgttatgtttgagtacatgaaattggtgataattgaattattgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 13448940  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  13448941 tgctctaa 13448948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 185 - 291
Target Start/End: Original strand, 20583567 - 20583672
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||||| | ||||||||||||    
T  20583567 aattatgaagatatgtttgaatacatgaaattggtgataattgaattattgttgatgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 20583665  T
Q  285 tgtgctc 291  Q
    | |||||    
T  20583666 tatgctc 20583672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 28722342 - 28722239
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||     
T  28722342 ttatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaatta 28722244  T
Q  287 tgctc 291  Q
    |||||    
T  28722243 tgctc 28722239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 38424451 - 38424348
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||     
T  38424451 ttatgatgatatgtttgaatacataaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaatta 38424353  T
Q  287 tgctc 291  Q
    |||||    
T  38424352 tgctc 38424348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 14935592 - 14935489
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||     
T  14935592 ttatggtgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaatta 14935494  T
Q  287 tgctc 291  Q
    |||||    
T  14935493 tgctc 14935489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 15363185 - 15363082
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||     
T  15363185 ttatggtgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaatta 15363087  T
Q  287 tgctc 291  Q
    |||||    
T  15363086 tgctc 15363082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 188 - 291
Target Start/End: Complemental strand, 4484958 - 4484856
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgt 287  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||   ||||||||||| | ||||||||||||| |    
T  4484958 tatgatgatatgtttgaatacatgaaattggtgataattgaattgttgttggagaaattgcatgttcattgtatgtgaaaat-gatatattgtgaattat 4484860  T
Q  288 gctc 291  Q
    ||||    
T  4484859 gctc 4484856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 9319578 - 9319661
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  9319578 ttatgatgatatgtttgaatacaagaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaatg 9319661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 9611542 - 9611460
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  9611542 aattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcaaagtatgtgaaa 9611460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 9839113 - 9839031
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  9839113 aattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcaaagtatgtgaaa 9839031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 188 - 294
Target Start/End: Complemental strand, 33559878 - 33559773
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgt 287  Q
    ||||||||||||||  | ||||||||||||||||||||||||||||||||| |||||||||||||||| | |||| |||||| | ||||||||||||||     
T  33559878 tatgatgatatgttaaaatacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgagaaaat-gatatattgtgaattgg 33559780  T
Q  288 gctctaa 294  Q
    |||||||    
T  33559779 gctctaa 33559773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 48356878 - 48356796
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  48356878 aattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcaaagtatgtgaaa 48356796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 4446444 - 4446341
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||| || ||||    
T  4446444 ttatgatgatatgtttgcacacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattatgtattg 4446346  T
Q  287 tgctc 291  Q
    |||||    
T  4446345 tgctc 4446341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 187 - 291
Target Start/End: Original strand, 8563362 - 8563466
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||  |||| |  ||||| ||||||||||| ||     
T  8563362 ttatgatgatatgtttgagtatatgaatttgatgataattgaattgttgttgatgaaattgcatgttcatgatatatataaatgagtatattgtgagtta 8563461  T
Q  287 tgctc 291  Q
    |||||    
T  8563462 tgctc 8563466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 17947607 - 17947713
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||| || |||| || | ||||||||||| | |||||||| |||||    
T  17947607 ttatgatgatatgtttgagtgcatgaaattggtgataattgaattgttgttggttaaactgaatgtgcatagtatgtgaaaat-gatatattgtaaattg 17947705  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  17947706 tgctctaa 17947713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 185 - 284
Target Start/End: Complemental strand, 31501407 - 31501309
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||| ||||||||| | ||||||||||||||||||||||||||||| ||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  31501407 aattatgaagatatgtttaaatacatgaaattggtgataattgaattgttattggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 31501309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 16914941 - 16915023
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||||||| |||||||||||||||| | |||||||||    
T  16914941 aattatgatgatatgtttgaatgcatgaaattgatgataattgaattgttgttggtgaaattgcatgttcaaagtatgtgaaa 16915023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 291
Target Start/End: Complemental strand, 4439015 - 4438912
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||||||||||| | ||||| ||||| | ||||||||||||||    
T  4439015 ttatgataatatgtttgcacacatgaaattggtgataattgaattgttattggtgaaattgcatgttcatagtatgttaaaat-gatatattgtgaattg 4438917  T
Q  287 tgctc 291  Q
    |||||    
T  4438916 tgctc 4438912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 34241220 - 34241302
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||| | | |||||||||    
T  34241220 aattatgatgttatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttaaaagtatgtgaaa 34241302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 14271912 - 14271997
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    ||||||| |||||||||||| | |||||||||| |||||||| ||||||||||| |||||||||||||||| | ||||||||||||    
T  14271912 aattatggtgatatgtttgaatgcatgaaattgttgataattcaattgttgttggtgaaattgcatgttcaaagtatgtgaaaatg 14271997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 14940986 - 14940884
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| | ||||||||| ||||||||| ||   |||||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  14940986 aattatggtgatatgtttgaatgcatgaaatttgtgataattaaa---ttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 14940891  T
Q  285 tgtgctc 291  Q
    | |||||    
T  14940890 tatgctc 14940884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 15368579 - 15368477
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| | ||||||||| ||||||||| ||   |||||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  15368579 aattatggtgatatgtttgaatgcatgaaatttgtgataattaaa---ttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 15368484  T
Q  285 tgtgctc 291  Q
    | |||||    
T  15368483 tatgctc 15368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 13377763 - 13377693
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  13377763 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 13377693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 49047687 - 49047757
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||| |||| |||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  49047687 aattataatgacatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 49047757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 193 - 253
Target Start/End: Original strand, 39291538 - 39291598
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgtt 253  Q
    |||||||||||||||  | || ||| ||||||||||||||||| |||||||||||||||||    
T  39291538 tgatatgtttgagtatgttaatttgatgataattgaattgttgatgatgaaattgcatgtt 39291598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 15977870 - 15977932
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||  | || ||| ||||||||||||| ||| |||||||||||||||||||    
T  15977870 tgatatgtttgagtatgttaatttgttgataattgaattattgatgatgaaattgcatgttca 15977932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 17223951 - 17224021
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | || ||| |||  ||||||||||||||||||  ||||||| ||||||||    
T  17223951 aattatgatgatatgtttgaatgcacgaagttgtggataattgaattgttgtttgtgaaatttcatgttca 17224021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 9250671 - 9250630
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattga 228  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  9250671 ttatgatgatatgtttgaatacaagaaattggtgataattga 9250630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 17947546 - 17947579
Alignment:
Q  200 tttgagtacatgaaattggtgataattgaattgt 233  Q
    ||||||||||||||||||||||||||||||||||    
T  17947546 tttgagtacatgaaattggtgataattgaattgt 17947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 13275011 - 13274941
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | || ||| ||| || ||||||||||||||||  | ||||| ||||||||    
T  13275011 aattatgatgatatgtttgaatgcaagaagttgttggtaattgaattgttgttagtaaaatttcatgttca 13274941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 44305034 - 44305096
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||  |||  |||||||| ||||||||||||||||| ||  |||||||||||||||    
T  44305034 tgatatgtttcggtatgtgaaattgatgataattgaattgttgatgtagaaattgcatgttca 44305096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 13037048 - 13037112
Alignment:
Q  190 tgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||  | |||||| ||| ||||||||| ||  |||||||||||||||||||||||    
T  13037048 tgatgatatgtttgtatgcatgaa-ttgatgataattgtatgattgttgatgaaattgcatgttca 13037112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 6e-47; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 10913118 - 10913011
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  10913118 ttatgatgatatgtttgagtacatgaatttggtgataattgaattgttgttgatgaaattgcatgtccataatatgtgaaaatgggtatattgtgaattg 10913019  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  10913018 tgctctaa 10913011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 38375711 - 38375814
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  38375711 ttatgatgatatgtttgagtacatgaatttgatgataattgaattgttgtagatgaaattgcatgttcataatttgtgaaaatgggtatattgtgaattg 38375810  T
Q  287 tgct 290  Q
    ||||    
T  38375811 tgct 38375814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 185 - 290
Target Start/End: Complemental strand, 15517865 - 15517760
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   |||||  |||||||||||||||||||    
T  15517865 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatggtatgtataaatgggtatattgtgaat 15517766  T
Q  285 tgtgct 290  Q
    ||||||    
T  15517765 tgtgct 15517760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 274
Target Start/End: Complemental strand, 8605057 - 8604970
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggta 274  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  8605057 ttatgatgatatgtttgagtacatgaaattggtaataattgaattgttgttgatgaaattgcatgttcatagtatgtgaaaatgggta 8604970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 31412348 - 31412450
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  31412348 ttatgatgatatgtttgaatacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 31412446  T
Q  287 tgct 290  Q
    ||||    
T  31412447 tgct 31412450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 291
Target Start/End: Original strand, 14814778 - 14814883
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  14814778 aattatggtgatatgtttgaatacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 14814876  T
Q  285 tgtgctc 291  Q
    |||||||    
T  14814877 tgtgctc 14814883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 6228638 - 6228746
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||| | ||||||||||||    
T  6228638 aattatggtgatatgtttgaatacatgaaattggtgataattgaattgttgttggtgaaattacatgttcatagtatgtgaaaat-gatatattgtgaat 6228736  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  6228737 tgtgctctaa 6228746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 50313419 - 50313313
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||| ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  50313419 ttataatgatatgtttgagtgcatgaaattagtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 50313321  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  50313320 tgctctaa 50313313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 202 - 294
Target Start/End: Original strand, 43427546 - 43427637
Alignment:
Q  202 tgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctctaa 294  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| | |||||||| |||||||||||||    
T  43427546 tgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcatagtatgtgaaaat-gatatattgtaaattgtgctctaa 43427637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 188 - 294
Target Start/End: Complemental strand, 41661796 - 41661691
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgt 287  Q
    ||||||||||||||||| |||||| || || |||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||||    
T  41661796 tatgatgatatgtttgaatacatggaaatgatgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattgt 41661698  T
Q  288 gctctaa 294  Q
    |||||||    
T  41661697 gctctaa 41661691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 4145827 - 4145934
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||||| | |||||||||||     
T  4145827 aattatggtgatatgtttgaatacatgaa-ttggtgataattgaattgttgttgatgaaattacatgttcatagtatgtgaaaat-gatatattgtgaac 4145924  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  4145925 tgtgctctaa 4145934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 13301482 - 13301571
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggta 274  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||||||||    
T  13301482 aattatgatggtatgtttgaatacatgaaattggtgataattgaattattgttggtgaaattgcatgttcatagtatgtgaaaatgggta 13301571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 13312138 - 13312227
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggta 274  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||||| | ||||||||||||||||    
T  13312138 aattatgatggtatgtttgaatacatgaaattggtgataattgaattattgttggtgaaattgcatgttcatagtatgtgaaaatgggta 13312227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 4162218 - 4162326
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||||| ||||| ||||||| || ||||| | ||||||||||| | ||||||||||||    
T  4162218 aattatggtgatatgtttgaatacataaaattggtgataattgaattgctgttggtgaaattacaagttcatagtatgtgaaaat-gatatattgtgaat 4162316  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  4162317 tgtgctctaa 4162326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 185 - 274
Target Start/End: Original strand, 11882231 - 11882320
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggta 274  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||| |||||||| ||||||| | ||||||||||||||||    
T  11882231 aattatgatggtatgtttgaatacatgaaattggtgataattgaattattgttggtgaaattgaatgttcatagtatgtgaaaatgggta 11882320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 185 - 266
Target Start/End: Complemental strand, 34560133 - 34560052
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaa 266  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  34560133 aattataatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcaaaatatgtgaa 34560052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 193 - 290
Target Start/End: Original strand, 33368948 - 33369044
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgct 290  Q
    |||||||||||| | |||||||||||||||||||||||||| |||| |||||||||||||||| | ||||||||||| | |||| |||||||||||||    
T  33368948 tgatatgtttgaatgcatgaaattggtgataattgaattgtggttggtgaaattgcatgttcatagtatgtgaaaat-gttatactgtgaattgtgct 33369044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 11515505 - 11515609
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttga-tgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaatt 285  Q
    ||||||||||||||||||||| ||| | ||| ||||||||||||||||||||| | |||||||| |||||  ||||||  ||||||||||||||||||||    
T  11515505 ttatgatgatatgtttgagtatatggatttgatgataattgaattgttgttgattcaaattgcacgttcatgatatgtataaatgggtatattgtgaatt 11515604  T
Q  286 gtgct 290  Q
    |||||    
T  11515605 gtgct 11515609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 11402816 - 11402718
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||| ||||||||     |||  |||| |||||||||||||||||||||    
T  11402816 tgatatgtttgagtatatgaatttgatgataattgaattgttgttgatgaaatttcatgttcatggggtgtataaataggtatattgtgaattgtgctc 11402718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 12539090 - 12539188
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    ||||||| |||||||  |||| ||| ||||||||||||||||| |||||||||||||||||||  ||| ||  ||||| ||||||||||||||||||||    
T  12539090 tgatatggttgagtatgtgaatttgttgataattgaattgttgatgatgaaattgcatgttcatgataagtataaatgagtatattgtgaattgtgctc 12539188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 12953198 - 12953128
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||||||||||||||||  |||||||||| ||||||||||||||||    
T  12953198 aattatgatgatatgtttgaatgcatgaaattggtgataattagattgttgttggtgaaattgcatgttca 12953128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 11638554 - 11638487
Alignment:
Q  222 taattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgct 290  Q
    ||||||||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||||||||||    
T  11638554 taattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-ggtatattgtgaattgtgct 11638487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 9590770 - 9590849
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||| ||||| | |||||||| | |||||||||    
T  9590770 tatgatgatatgtttgaatgcattaaattggtgataattgaattgttgttggtgaaacttcatgttcaaagtatgtgaaa 9590849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 3576451 - 3576521
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  3576451 aattatgatgatatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 3576521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 17191775 - 17191705
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||||||||||| ||||||| ||||||||    
T  17191775 aattatgatgatatgtttgaatgcatgaaattgttgataatcgaattgttgttggtgaaatttcatgttca 17191705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 17204915 - 17204845
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||||||| ||||||| |||||||||||| ||||||| ||||||||    
T  17204915 aattatgatgatatgtttgaatgcatgaaattgttgataatcgaattgttgttggtgaaatttcatgttca 17204845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 47784779 - 47784849
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  47784779 aattatgatgatatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 47784849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 17139742 - 17139656
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgg 271  Q
    ||||||||||| |||||||| | |||||| ||| || ||||||||||||||||| ||||||| |||||||| | |||| ||||||||    
T  17139742 aattatgatgacatgtttgaatgcatgaagttgttggtaattgaattgttgttggtgaaatttcatgttcaaactatgagaaaatgg 17139656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 39656760 - 39656690
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| |  |||||||||||||||||||||||||||||  ||||||| ||||||||    
T  39656760 aattatgatgttatgtttgaatttatgaaattggtgataattgaattgttgttagtgaaatttcatgttca 39656690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 15550824 - 15550726
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    |||||||||||||||  | || ||| ||||||||||||| ||| |||||||||||||||||||  || | |  |||||||||  |||||||||||||||    
T  15550824 tgatatgtttgagtatgttaatttgatgataattgaatttttgatgatgaaattgcatgttcatgatgtatataaatgggtagtttgtgaattgtgctc 15550726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 30207450 - 30207380
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||| ||||| | ||||||||    
T  30207450 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaacttcatgttca 30207380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 48421803 - 48421741
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||  | || ||| ||||||||||||||||| |||||||||||||||||||    
T  48421803 tgatatgtttgagtatgttaatttgatgataattgaattgttggtgatgaaattgcatgttca 48421741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 12488762 - 12488809
Alignment:
Q  208 catgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||| ||| |||||||||||||||||||||||||||| ||||||||    
T  12488762 catgaagttgttgataattgaattgttgttgatgaaatttcatgttca 12488809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 14080740 - 14080673
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||  | |||||||||| ||||||||||||||| |||  |||| |||||||||||    
T  14080740 tatgatgatatgtttgtatgcatgaaattgatgataattgaattgtggttagtgaatttgcatgttca 14080673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 291
Target Start/End: Complemental strand, 1991012 - 1990931
Alignment:
Q  209 atgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    ||||||||||| ||||||||||| |||||  |||||||||||||||| | ||  ||||||| | ||||||||||||| |||||    
T  1991012 atgaaattggtaataattgaattattgtttgtgaaattgcatgttcatagtagatgaaaat-gatatattgtgaattatgctc 1990931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 14059226 - 14059311
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||| ||   |||||| |||||||| | |||| |||||||    
T  14059226 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgtttttagagaaatttcatgttcaaagtatgagaaaatg 14059311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 14177065 - 14177101
Alignment:
Q  219 tgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||| |||||||||||||||||||    
T  14177065 tgataattgaattgttgatgatgaaattgcatgttca 14177101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 16880357 - 16880287
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||| |||||||||||||| | || ||| ||| |||||||||||||||||||  | ||||| ||||||||    
T  16880357 aattacgatgatatgtttgaatgcaagaagttgttgataattgaattgttgttagtaaaatttcatgttca 16880287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 18970147 - 18970049
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    |||||||||| ||||  | || ||| || |||||||||||||| |||||||||| ||||||||  || | || |||||||||  ||||||||| |||||    
T  18970147 tgatatgtttaagtatgttaatttgatgttaattgaattgttgatgatgaaatttcatgttcatgatgtatgtaaatgggtagtttgtgaattatgctc 18970049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 21167097 - 21167131
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgat 222  Q
    ||||||||||||||||| |||||||||||||||||    
T  21167097 tatgatgatatgtttgaatacatgaaattggtgat 21167131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 15876302 - 15876241
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaatt 246  Q
    ||||||||| |||||||| | | |||||  ||| |||||| |||||||||||||||||||||    
T  15876302 aattatgataatatgtttaaatgcatgatgttgttgataactgaattgttgttgatgaaatt 15876241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 92; Significance: 1e-44; HSPs: 4)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 67972 - 68079
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  67972 ttatgatgatatgtttaagtacatgaatttggtgataattgaattgttgtagatgaaattgcatgttcataatatgtgaaaatgggtatattgtgaattg 68071  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  68072 tgctctaa 68079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 132047 - 131941
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||  | ||||||||||| | ||||||||||||||    
T  132047 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttggtaaaattgcatgttcgtagtatgtgaaaat-gatatattgtgaattg 131949  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  131948 tgctctaa 131941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 188 - 253
Target Start/End: Complemental strand, 109821 - 109756
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgtt 253  Q
    ||||||||||||||||| | |||||| ||| ||||||||||||||||||| |||||||| ||||||    
T  109821 tatgatgatatgtttgaatccatgaagttgttgataattgaattgttgttaatgaaatttcatgtt 109756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 102935 - 103005
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||| ||  |||||||||||||||||||  ||||||| ||||||||    
T  102935 aattatgatgatatgtttgaatgcatgaagtttttgataattgaattgttgttagtgaaatttcatgttca 103005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 23222983 - 23222877
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  23222983 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcataatatgtgaaaat-gatatattgtgaattg 23222885  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  23222884 tgctctaa 23222877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 22462112 - 22462218
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||     
T  22462112 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcataatatgtgaaagt-ggtatattgtgaattt 22462210  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  22462211 tgctctaa 22462218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 23222148 - 23222042
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||     
T  23222148 ttatgatgatatgttagagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcataatatgtgaaaat-ggtatattgtgaatta 23222050  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  23222049 tgctctaa 23222042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 186 - 291
Target Start/End: Complemental strand, 19672519 - 19672415
Alignment:
Q  186 attatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaatt 285  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| | |||||||||||||    
T  19672519 attatgatgttatgtttgagtacatgaaattggtgataattgaattgttgttaatgaaattgcatgttcataatatgtgaaaat-gatatattgtgaatt 19672421  T
Q  286 gtgctc 291  Q
    ||||||    
T  19672420 gtgctc 19672415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 186 - 287
Target Start/End: Original strand, 31467611 - 31467712
Alignment:
Q  186 attatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaatt 285  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||  ||||||||||||||||||||    
T  31467611 attatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttaatgaaattgcatgttcatggtatgtataaatgggtatattgtgaatt 31467710  T
Q  286 gt 287  Q
    ||    
T  31467711 gt 31467712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 19854387 - 19854281
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||||| |||    
T  19854387 ttatgatgttatgtttgagtacatgaaattgatgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-ggtatattgtgagttg 19854289  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  19854288 tgctctaa 19854281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 17013654 - 17013756
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| | ||||||||||| | ||||||||||||||    
T  17013654 ttatgatgatatgtttgagtacatgaaattggtgaaaattgaattgttgttggtgaaattgcctgttcatagtatgtgaaaat-gatatattgtgaattg 17013752  T
Q  287 tgct 290  Q
    ||||    
T  17013753 tgct 17013756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 34967099 - 34966993
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||  | ||||||||||||||    
T  34967099 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttcgtgaaattgcatgttcatagtatgtgaaaa-agatatattgtgaattg 34967001  T
Q  287 tgctctaa 294  Q
    | ||||||    
T  34967000 tactctaa 34966993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 185 - 292
Target Start/End: Original strand, 18629621 - 18629727
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||| | ||||||||||||||    
T  18629621 aattatgatgatatgtttgaatgcatgaaattgatgataattgaattgttgttggtgaaattgcatgttcaaagtatgtgaaagt-ggtatattgtgaat 18629719  T
Q  285 tgtgctct 292  Q
    | ||||||    
T  18629720 tatgctct 18629727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 19175383 - 19175280
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||| || |||||| |||||||||||||||||||||| ||||||||||||||  ||||||  ||||| |||||||||||||||    
T  19175383 ttatgatgatatgtttgagtatataaaattgatgataattgaattgttgttgataaaattgcatgttcatgatatgtataaatgagtatattgtgaattg 19175284  T
Q  287 tgct 290  Q
    ||||    
T  19175283 tgct 19175280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 191 - 290
Target Start/End: Complemental strand, 21931432 - 21931333
Alignment:
Q  191 gatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgct 290  Q
    |||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||| ||||    
T  21931432 gatgatatgtttgaatatatgaaattgatgataattgaattgttgttgatgaaattgcatgttcatgatatgtataaatgggtatattgtgaattatgct 21931333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 22848249 - 22848144
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||| | | || |||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||| | ||||||||||||    
T  22848249 aattatgatgatatgtttaaatgcaagaaattggtgataattgaattgttgttggtgaaatttcatgttcatagtatgtgaaaat-gttatattgtgaat 22848151  T
Q  285 tgtgctc 291  Q
    |||||||    
T  22848150 tgtgctc 22848144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 17557031 - 17557112
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  17557031 aattatgatgatatgtttga-tgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcaaagtatgtgaaa 17557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 17083211 - 17083318
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||||| | |||||| |||||||||||||||||||||||| |||||||| ||||||| | ||||||||||| | |||||  |||||    
T  17083211 aattatgatgatatgtttgaatgcatgaa-ttggtgataattgaattgttgttggtgaaattgtatgttcatagtatgtgaaaat-gatatatgttgaat 17083308  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  17083309 tgtgctctaa 17083318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 16136495 - 16136392
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||| |||||||||| || ||||||||| |||||||||||| ||| ||||||||||||||||||||  ||||||  | ||||||||||||| |||||    
T  16136495 ttatgataatatgtttgaatatatgaaattgatgataattgaatagtttttgatgaaattgcatgttcatgatatgtatagatgggtatattgtaaattg 16136396  T
Q  287 tgct 290  Q
    ||||    
T  16136395 tgct 16136392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 294
Target Start/End: Complemental strand, 32352278 - 32352173
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgt 287  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||||  || |||||||| ||||||| | ||||||||||| | |||||||||||||||    
T  32352278 tatgatggtatatttgaatacatgaaattggtgataattgaattgtttatggtgaaattgtatgttcatagtatgtgaaaat-gatatattgtgaattgt 32352180  T
Q  288 gctctaa 294  Q
    | |||||    
T  32352179 gttctaa 32352173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 25651461 - 25651389
Alignment:
Q  195 atatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  25651461 atatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcaaagtatgtgaaa 25651389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 22361778 - 22361848
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  22361778 aattatgatgatatgtttgaatgcatgaaattgttgataattgaattgttgttgctgaaatttcatgttca 22361848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 29605683 - 29605579
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| | |||||| || ||||||||||||||||||||| ||||||| |||||||| | ||||||||||| |  |||||||||||    
T  29605683 aattatggtgatatgtttgaatgcatgaa-ttagtgataattgaattgttgttggtgaaattacatgttcatagtatgtgaaaat-gaaatattgtgaat 29605586  T
Q  285 tgtgctc 291  Q
    |||||||    
T  29605585 tgtgctc 29605579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 29160343 - 29160424
Alignment:
Q  212 aaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctctaa 294  Q
    ||||||||||||||||||||||||||  ||||||||||||||||   ||||||||||| | |||||||||| |||||||||||    
T  29160343 aaattggtgataattgaattgttgttagtgaaattgcatgttcatggtatgtgaaaat-gatatattgtgagttgtgctctaa 29160424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 294
Target Start/End: Original strand, 33538386 - 33538490
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgt 287  Q
    |||| |||||| ||||| | |||||||||||||| |||||||||||||||| |||||||||||||||| | ||||||||| | | ||| ||||||||| |    
T  33538386 tatggtgatatatttgaatgcatgaaattggtga-aattgaattgttgttggtgaaattgcatgttcaaagtatgtgaaagt-gatatgttgtgaattat 33538483  T
Q  288 gctctaa 294  Q
    |||||||    
T  33538484 gctctaa 33538490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 18381696 - 18381766
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||| ||||| |||||||| ||| |||||||||||| ||||||| ||||||| ||||||||    
T  18381696 aattatgatgatatttttgaatacatgaagttgttgataattgaatggttgttggtgaaatttcatgttca 18381766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 21623402 - 21623332
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  21623402 aattatgatggtatgtttgaatgcatgaagttgttgataattgaattgttgttgctgaaatttcatgttca 21623332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 22585575 - 22585637
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||  | || ||| ||||||||||||||||| |||||||||||||||||||    
T  22585575 tgatatgtttgagtattttaatttgatgataattgaattgttgatgatgaaattgcatgttca 22585637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 22590406 - 22590468
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||  | || ||| ||||||||||||||||| |||||||||||||||||||    
T  22590406 tgatatgtttgagtattttaatttgatgataattgaattgttgatgatgaaattgcatgttca 22590468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 28195106 - 28195192
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgg 271  Q
    |||||||||||||||||||| |  ||||| ||| |||||||||||||||||||  | ||||| |||||||| | |||| ||||||||    
T  28195106 aattatgatgatatgtttgaatgtatgaagttgttgataattgaattgttgttagtaaaatttcatgttcatagtatgagaaaatgg 28195192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 269
Target Start/End: Complemental strand, 18399172 - 18399088
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaat 269  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||   |||||| |||||||| | |||| ||||||    
T  18399172 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttagagaaatttcatgttcaaagtatgagaaaat 18399088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Complemental strand, 33324920 - 33324857
Alignment:
Q  191 gatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||  | |||||||||| |||||||||||||||||||| |||| |||||||||||    
T  33324920 gatgatatgtttgtatgcatgaaattgttgataattgaattgttgttg-tgaatttgcatgttca 33324857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 191 - 255
Target Start/End: Original strand, 35136032 - 35136095
Alignment:
Q  191 gatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||  | |||||||||| |||||||||||||||||||| |||| |||||||||||    
T  35136032 gatgatatgtttgtatgcatgaaattgatgataattgaattgttgttg-tgaatttgcatgttca 35136095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 16887808 - 16887875
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||| |||||||||  | |||||||||| ||||||||||| |||||||| |||| |||||||||||    
T  16887808 tatgataatatgtttgtatgcatgaaattgatgataattgaactgttgttggtgaatttgcatgttca 16887875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 15889735 - 15889797
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||  | || ||| |||||||||| |||||| |||||||||||||||||||    
T  15889735 tgatatgtttgagtatgttaatttgatgataattgatttgttgatgatgaaattgcatgttca 15889797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 25640585 - 25640646
Alignment:
Q  194 gatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||  | || ||| ||||||||||||| ||| |||||||||||||||||||    
T  25640585 gatatgtttgagtatgttaatttgatgataattgaatttttgatgatgaaattgcatgttca 25640646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 26512367 - 26512270
Alignment:
Q  194 gatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    |||||||||| ||||| ||| ||| ||||| |||||||||||||| ||||||| |||||| |  |||| |  |||||||||  ||||||||| |||||    
T  26512367 gatatgtttgggtacaagaatttgatgatatttgaattgttgttgttgaaattacatgtttatgatatatataaatgggtagtttgtgaattatgctc 26512270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 26517483 - 26517386
Alignment:
Q  194 gatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    |||||||||| ||||| ||| ||| ||||| |||||||||||||| ||||||| |||||| |  |||| |  |||||||||  ||||||||| |||||    
T  26517483 gatatgtttgggtacaagaatttgatgatatttgaattgttgttgttgaaattacatgtttatgatatatataaatgggtagtttgtgaattatgctc 26517386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 26089960 - 26089863
Alignment:
Q  194 gatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    ||||||||||| ||  | || ||| || ||| |||||||||| ||||||||||||| ||||| ||| | ||||||||||||  |||| |||| |||||    
T  26089960 gatatgtttgaatatgttaatttgatgttaaatgaattgttgatgatgaaattgcaagttcataatgtatgaaaatgggtagtttgtaaattatgctc 26089863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 216
Target Start/End: Original strand, 29158399 - 29158428
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaatt 216  Q
    ||||||||||||||||||||||||||||||    
T  29158399 ttatgatgatatgtttgagtacatgaaatt 29158428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 22497224 - 22497330
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  22497224 ttatgatgatatgtttgagtagatgaaattggtgataattgaattgttgttgatgaaattgcatgttcataatatgtgaaaat-gatatattgtgaattg 22497322  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  22497323 tgctctaa 22497330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 24552585 - 24552691
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  24552585 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 24552683  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  24552684 tgctctaa 24552691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 18261486 - 18261592
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||||| | ||||||||||||||    
T  18261486 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttggtgaaattgcatcttcatagtatgtgaaaat-gatatattgtgaattg 18261584  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  18261585 tgctctaa 18261592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 33172460 - 33172354
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  33172460 ttatgatgatatgtttgaatacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 33172362  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  33172361 tgctctaa 33172354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 45558952 - 45559058
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  45558952 ttatgatgatatgtttgagtacatgaaattagtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 45559050  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  45559051 tgctctaa 45559058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 22742997 - 22742890
Alignment:
Q  186 attatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaatt 285  Q
    |||||| |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||    
T  22742997 attatggtgatatgtttgagtgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaatt 22742899  T
Q  286 gtgctctaa 294  Q
    |||||||||    
T  22742898 gtgctctaa 22742890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 187 - 293
Target Start/End: Original strand, 45465141 - 45465246
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||     
T  45465141 ttatgatgttatgtttgagtacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gttatattgtgaatta 45465239  T
Q  287 tgctcta 293  Q
    |||||||    
T  45465240 tgctcta 45465246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 16002230 - 16002123
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||| ||||| ||| |||||||| |||||||||||||||||||| |||||||  ||||||||||||| ||||||||| |||||    
T  16002230 ttatgatgatatgtttgagtatatgaatttgatgataatttaattgttgttgatgaaattgtatgttcatgatatgtgaaaatgagtatattgtaaattg 16002131  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  16002130 tgctctaa 16002123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 187 - 287
Target Start/End: Original strand, 18041547 - 18041646
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  18041547 ttatgacgatatgtttgagtacaagaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 18041645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 15933532 - 15933450
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||    
T  15933532 aattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcaaagtatgtgaaa 15933450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 187 - 285
Target Start/End: Original strand, 38635663 - 38635760
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaatt 285  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||| |||||| |||||| | |||||||||||||    
T  38635663 ttatcatgatatgtttgaatacatgaaattagtgataattgaattgttgttggtgaaattgcatgttcataatatgcgaaaat-gatatattgtgaatt 38635760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 37653629 - 37653737
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||| ||||||  | |||||| |||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  37653629 aattatggtgatgtgtttgtatgcatgaatttggtgataattgaattgttgttgctgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 37653727  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  37653728 tgtgctctaa 37653737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 26011728 - 26011646
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||    
T  26011728 aattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattacatgttcaaagtatgtgaaa 26011646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 22887993 - 22887893
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||| ||||| ||| ||||| |||||||||||   |||||||||||||||||  ||||||  ||||| |||||||||||||||    
T  22887993 ttatgatgatatgtttgagtatatgaatttgatgatatttgaattgttg---atgaaattgcatgttcatgatatgtataaatgagtatattgtgaattg 22887897  T
Q  287 tgct 290  Q
    ||||    
T  22887896 tgct 22887893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 33528659 - 33528551
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| || |||  | ||| ||||||| | |||||  |||||    
T  33528659 aattatgatgatatgtttgaatgcatgaaattgttgataattgaattgttgttgatgaaattgtatcttcttagtatatgaaaat-gatatatgttgaat 33528561  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  33528560 tgtgctctaa 33528551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 5854848 - 5854778
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||||||||| |||||| |||||||||    
T  5854848 aattatgatgatatgtttgaatgcatgaaattggcgataattgaattgttgttggtgaaatagcatgttca 5854778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 195 - 291
Target Start/End: Original strand, 19331340 - 19331432
Alignment:
Q  195 atatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    |||||||||| ||||||||||||||||||||||||   |||||| |||||||||||||||| | ||||||||||| | ||||||||||||| |||||    
T  19331340 atatgtttgaatacatgaaattggtgataattgaa---ttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattatgctc 19331432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 194 - 290
Target Start/End: Original strand, 18118311 - 18118407
Alignment:
Q  194 gatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgct 290  Q
    |||||||||| ||| || || ||| |||||||||||||||||||||||||||||||||||||  |||||   |||| ||||||| ||||||||||||    
T  18118311 gatatgtttgcgtatataaatttgatgataattgaattgttgttgatgaaattgcatgttcatgatatgcataaattggtatatggtgaattgtgct 18118407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 244
Target Start/End: Original strand, 27233103 - 27233162
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaa 244  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||    
T  27233103 aattatgatgatatgtttgaatacatgaaattggtgataattgaattgtttttggtgaaa 27233162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 23150013 - 23149930
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatg-ttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| | ||||||| | ||||||| ||||||||||||| ||||||| |||| |||| |||||||||||    
T  23150013 aattatgatgatatgtttgaatgcatgaaactagtgataaatgaattgttgttggtgaaatttcatgattcaaaatatgtgaaa 23149930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 25296389 - 25296322
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||| | |||||||||  |||||||||||||| ||||| ||||||||||||||||    
T  25296389 tatgatgatatgtttgaatgcatgaaattaatgataattgaattgctgttggtgaaattgcatgttca 25296322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 25758409 - 25758342
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||| | |||||||||  |||||||||||||| ||||| ||||||||||||||||    
T  25758409 tatgatgatatgtttgaatgcatgaaattaatgataattgaattgctgttggtgaaattgcatgttca 25758342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 17285438 - 17285368
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||| | | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  17285438 aattatgatgatatgtttaaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 17285368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 21198165 - 21198235
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||| |||  ||||||||||||||||||| ||||||| ||||||||    
T  21198165 aattatgatgatatgtttgaatgcatgaagttgtagataattgaattgttgttggtgaaatttcatgttca 21198235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 23151846 - 23151916
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||| ||||| | ||||||| | ||||||||||||||||||||| ||||||| ||||||||    
T  23151846 aattatgatgatatatttgaatgcatgaaactagtgataattgaattgttgttggtgaaatttcatgttca 23151916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 23158395 - 23158312
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatg-ttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| | ||||||| | ||||||| ||||||||||||| ||||||| |||| |||| |||| ||||||    
T  23158395 aattatgatgatatgtttgaatgcatgaaactagtgataaatgaattgttgttggtgaaatttcatgattcaaaatacgtgaaa 23158312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 21259520 - 21259618
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    |||||||||||||||  | || ||| ||||||||||||| ||| |||||||||||||||||||  || | |  |||||||||  |||||||||||||||    
T  21259520 tgatatgtttgagtatgttaatttgatgataattgaatttttgatgatgaaattgcatgttcatgatgtatataaatgggtagtttgtgaattgtgctc 21259618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 23837432 - 23837362
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||| | | |||||| ||| |||||||||||||||||||  ||||||| ||||||||    
T  23837432 aattatgatgatatgtttaaatgcatgaagttgttgataattgaattgttgttattgaaatttcatgttca 23837362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 270
Target Start/End: Complemental strand, 29306648 - 29306566
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    ||||||||||||||  | | ||||||||| ||||||||||||||||||||| |||| ||| ||||||| | | ||||||||||    
T  29306648 tatgatgatatgttctaatgcatgaaattagtgataattgaattgttgttggtgaatttgtatgttcaaagtttgtgaaaatg 29306566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 188 - 252
Target Start/End: Original strand, 23226092 - 23226156
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgt 252  Q
    ||||||||||||||||  | |||||||||| |||||||||| ||||||||| |||| ||||||||    
T  23226092 tatgatgatatgtttgtatgcatgaaattgatgataattgagttgttgttggtgaatttgcatgt 23226156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 267
Target Start/End: Original strand, 33611069 - 33611148
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    ||||||||||| ||||| | ||||||||||||||| |||  |||||||||| ||||| | |||||||| | |||||||||    
T  33611069 tatgatgatatatttgaatgcatgaaattggtgatcattagattgttgttggtgaaaattcatgttcaaagtatgtgaaa 33611148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 22981507 - 22981437
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||   |||||| ||||||||    
T  22981507 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttagagaaatttcatgttca 22981437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 38533883 - 38533797
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgg 271  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||   |||||  |||||||| | |||| ||||||||    
T  38533883 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttagagaaatctcatgttcaaagtatgagaaaatgg 38533797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 15970029 - 15969970
Alignment:
Q  211 gaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    |||||||||||||||||| ||||||||| |||||||| ||| ||| | ||| ||||||||    
T  15970029 gaaattggtgataattgatttgttgttggtgaaattgaatgatcaaagtatatgaaaatg 15969970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 17502387 - 17502325
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||  | || ||| |||| |||||||||||  |||||||||||||||||||    
T  17502387 tgatatgtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgttca 17502325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 20175795 - 20175857
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||  |||  |||||||| ||||||||||||||||| ||  |||||||||||||||    
T  20175795 tgatatgtttcggtatgtgaaattgatgataattgaattgttgatgtagaaattgcatgttca 20175857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 20220522 - 20220584
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||  |||  |||||||| ||||||||||||||||| ||  |||||||||||||||    
T  20220522 tgatatgtttcggtatgtgaaattgatgataattgaattgttgatgtagaaattgcatgttca 20220584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 4234081 - 4234021
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgtt 253  Q
    |||||||||||||||  | || ||| |||| |||||||||||  |||||||||||||||||    
T  4234081 tgatatgtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgtt 4234021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 16038936 - 16039008
Alignment:
Q  219 tgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    |||||| |||||||||| ||||||||||||| |||||  || | ||||||||||||  |||| |||| |||||    
T  16038936 tgataaatgaattgttgatgatgaaattgcaagttcatgatgtatgaaaatgggtagtttgtaaattatgctc 16039008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 23218103 - 23218043
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgtt 253  Q
    |||||||||||||||  | || ||| |||| |||||||||||  |||||||||||||||||    
T  23218103 tgatatgtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgtt 23218043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 23417474 - 23417367
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  23417474 ttatgatgatttgtttgagtacatgaatttggtgatgattgaattgttgttgatgaaattgcatgttcataatatgtgaaaattggtatattgtgaattg 23417375  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  23417374 tgctctaa 23417367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 16835314 - 16835420
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  16835314 ttatgatgatatgtttgggtacatgaaattggtgataattgatttgttgttgatgaaattgcatgttcataatatgtgaaaat-agtatattgtgaattg 16835412  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  16835413 tgctctaa 16835420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 21109979 - 21109876
Alignment:
Q  190 tgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgc 289  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||||||    
T  21109979 tgatgatatgtttgagtacatgaaattggtaataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattgtgc 21109881  T
Q  290 tctaa 294  Q
    |||||    
T  21109880 tctaa 21109876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 22885876 - 22885771
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  22885876 aattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gttatattgtgaat 22885778  T
Q  285 tgtgctc 291  Q
    |||||||    
T  22885777 tgtgctc 22885771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 188 - 294
Target Start/End: Original strand, 26559831 - 26559936
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgt 287  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||||    
T  26559831 tatgattatatgtttgaatacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattgt 26559929  T
Q  288 gctctaa 294  Q
    |||||||    
T  26559930 gctctaa 26559936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 23234500 - 23234606
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||||||||||| | | ||||||||||| | ||||||||||||||    
T  23234500 ttatgatgatatgtttaagtacatgaaattggtgataattgaattgttgttggtgtaattgcatgtttatagtatgtgaaaat-gatatattgtgaattg 23234598  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  23234599 tgctctaa 23234606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 24084311 - 24084203
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||| | ||||||||||| | ||||||||||||    
T  24084311 aattatggtgatatgtttgaatacatgaaattggtgataattgaattgttgttggtaaaattacatgttcatagtatgtgaaaat-gatatattgtgaat 24084213  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  24084212 tgtgctctaa 24084203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 29918199 - 29918091
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||| | |||||||| | || ||||||||||||    
T  29918199 aattatgatgatatgtttgaatacatgaaattgatgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaca-ggatatattgtgaat 29918101  T
Q  285 tgtgctctaa 294  Q
    | ||||||||    
T  29918100 tatgctctaa 29918091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 187 - 247
Target Start/End: Complemental strand, 19873993 - 19873933
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattg 247  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19873993 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattg 19873933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 21310725 - 21310807
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | | ||||||||||    
T  21310725 tatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcaaagtttgtgaaaatg 21310807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 11763523 - 11763626
Alignment:
Q  191 gatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgct 290  Q
    ||||||||||||||||| ||||| ||| |||||||||| ||| ||||||||||||| ||||||||  |  |||  |||||||||||||||||||||||||    
T  11763523 gatgatatgtttgagtagatgaatttgatgataattgagttgatgttgatgaaatttcatgttcatgaggtgtataaatgggtatattgtgaattgtgct 11763622  T
Q  291 ctaa 294  Q
    ||||    
T  11763623 ctaa 11763626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 21222621 - 21222691
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  21222621 aattatgatgatatgtttgaatgcatgaaattggtgataattaaattgttgttggtgaaattgcatgttca 21222691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 21297191 - 21297273
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||||| |||||||||||||||| | | ||||||||||    
T  21297191 tatgatgatatgtttgaacgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcaaagtttgtgaaaatg 21297273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 188 - 294
Target Start/End: Complemental strand, 37983595 - 37983490
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgt 287  Q
    |||| |||||| ||||| | ||||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||| | | ||||||||||||| |    
T  37983595 tatggtgatatatttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatattcaaagtatgtgaaagt-gatatattgtgaattat 37983497  T
Q  288 gctctaa 294  Q
    |||||||    
T  37983496 gctctaa 37983490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 23981529 - 23981599
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  23981529 aattatgatgatatgtttgtatgcatgaaattggtgataattgaattgttgttggtgaatttgcatgttca 23981599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 185 - 254
Target Start/End: Complemental strand, 21617250 - 21617181
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttc 254  Q
    |||||||||||||||||||| | |||||||||||||||||||| |||||||||  |||||||||||||||    
T  21617250 aattatgatgatatgtttgaatgcatgaaattggtgataattggattgttgttagtgaaattgcatgttc 21617181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 6456855 - 6456753
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||| |||| |||||| ||||||||||||| ||||||||||||   |||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  6456855 aattatgaagatacgtttgaatacatgaaattggcgataattgaatt---gttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 6456760  T
Q  285 tgtgctc 291  Q
    | |||||    
T  6456759 tatgctc 6456753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 19862443 - 19862373
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  19862443 aattatgatgatatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 19862373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 5450856 - 5450926
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  5450856 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 5450926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 432697 - 432612
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    |||||||||||||||||||| | |||| | ||| |||||||||||||||||||| ||||| | |||||||| | |||| |||||||    
T  432697 aattatgatgatatgtttgaatgcatgtagttgttgataattgaattgttgttggtgaaacttcatgttcaaagtatgagaaaatg 432612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 3674098 - 3674044
Alignment:
Q  183 caaattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgtt 237  Q
    |||||||||||||||||||||| ||||| || ||| |||||||||||||||||||    
T  3674098 caaattatgatgatatgtttgaatacattaagttgttgataattgaattgttgtt 3674044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 24225383 - 24225438
Alignment:
Q  239 atgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctctaa 294  Q
    |||||||||||||||||  ||||||  ||||||||||||||||| |||||||||||    
T  24225383 atgaaattgcatgttcatgatatgtataaatgggtatattgtgatttgtgctctaa 24225438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 7728630 - 7728584
Alignment:
Q  209 atgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  7728630 atgaaattggtgataattgatttgttgttggtgaaatttcatgttca 7728584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 22662730 - 22662766
Alignment:
Q  219 tgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||| |||||||||||||||||||    
T  22662730 tgataattgaattgttgatgatgaaattgcatgttca 22662766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 269
Target Start/End: Original strand, 32966162 - 32966246
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaat 269  Q
    |||||||||| |||||| || |  | |||||||||||||||||| ||||||||| |||||||| ||| ||| | ||| |||||||    
T  32966162 aattatgatgttatgttggaatgtaagaaattggtgataattgatttgttgttggtgaaattgaatgatcaaagtatatgaaaat 32966246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 28902425 - 28902366
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaa 244  Q
    |||||||||| ||||||||| | ||| || ||| |||||||||||||||||||| |||||    
T  28902425 aattatgatgttatgtttgaatgcataaagttgttgataattgaattgttgttggtgaaa 28902366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 28938820 - 28938761
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaa 244  Q
    |||||||||| ||||||||| | ||| || ||| |||||||||||||||||||| |||||    
T  28938820 aattatgatgttatgtttgaatgcataaagttgttgataattgaattgttgttggtgaaa 28938761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 222
Target Start/End: Original strand, 5621810 - 5621844
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgat 222  Q
    ||||||||||||||||| |||||||||||||||||    
T  5621810 tatgatgatatgtttgaatacatgaaattggtgat 5621844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 16595741 - 16595691
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttg 235  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||    
T  16595741 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttg 16595691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 2e-40; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 20194258 - 20194150
Alignment:
Q  187 ttatgatgatatgttt-gagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaatt 285  Q
    |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  20194258 ttatgatgatatgttttgagtatatgaatttggtgataattgaattgttgttgatgaaattgcatgttcataatatgtgataatgggtatattgtgaatt 20194159  T
Q  286 gtgctctaa 294  Q
    |||||||||    
T  20194158 gtgctctaa 20194150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 33397584 - 33397478
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||   ||||||||||||||    
T  33397584 ttatgatgatatgtttgagtacatgaaattggtgataattgagttgttgttgatgaaattgcatgttcataatatgtgaaaat-aatatattgtgaattg 33397486  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  33397485 tgctctaa 33397478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 40436284 - 40436390
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||||||    
T  40436284 ttatgatgatatgtttgaatatatgaaattggtgataattgaattgttgttgatgaaattgcatgttcataatatgtgaaaat-gatatattgtgaattg 40436382  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  40436383 tgctctaa 40436390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 5768184 - 5768290
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||| | ||||||||||||||    
T  5768184 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttggtgaaattgtatgttcatagtatgtgaaaat-gatatattgtgaattg 5768282  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  5768283 tgctctaa 5768290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 25094091 - 25093985
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| |||||| | ||||||||||||||    
T  25094091 ttatgatgatatgtttgagtacatgaatttggtgataattgaattgttgttgatgaaattgcatgtccataatatgagaaaat-gatatattgtgaattg 25093993  T
Q  287 tgctctaa 294  Q
    || |||||    
T  25093992 tgttctaa 25093985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 185 - 290
Target Start/End: Complemental strand, 52400865 - 52400761
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  52400865 aattatggtgatatgtttgaatacatgaaattggtgatagttgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 52400767  T
Q  285 tgtgct 290  Q
    ||||||    
T  52400766 tgtgct 52400761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 290
Target Start/End: Original strand, 8537924 - 8538027
Alignment:
Q  186 attatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaatt 285  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||    
T  8537924 attatgatgatatgtttgaatgcatgaaattagtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gttatattgtgaatt 8538022  T
Q  286 gtgct 290  Q
    |||||    
T  8538023 gtgct 8538027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 186 - 290
Target Start/End: Original strand, 8603163 - 8603266
Alignment:
Q  186 attatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaatt 285  Q
    ||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||    
T  8603163 attatgatgatatgtttgaatgcatgaaattagtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gttatattgtgaatt 8603261  T
Q  286 gtgct 290  Q
    |||||    
T  8603262 gtgct 8603266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 49997296 - 49997402
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||| |||||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  49997296 ttatggtgatatgtttgaatatatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 49997394  T
Q  287 tgctctaa 294  Q
    | ||||||    
T  49997395 tactctaa 49997402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 21195248 - 21195143
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||| ||||||| | ||||||||||| | ||||||||||||    
T  21195248 aattatggtgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgtatgttcatagtatgtgaaaat-gatatattgtgaat 21195150  T
Q  285 tgtgctc 291  Q
    | |||||    
T  21195149 tatgctc 21195143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 187 - 255
Target Start/End: Original strand, 37233875 - 37233943
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  37233875 ttatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtaaaattgcatgttca 37233943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 17609162 - 17609092
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||| ||||| | |||||||||||||||||||| |||||||||| ||||||||||||||||    
T  17609162 aattatgatgatatatttgaatgcatgaaattggtgataattggattgttgttggtgaaattgcatgttca 17609092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 19603331 - 19603246
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    |||||||||| ||||||||| |  |||||||||||||||||||| ||||||||| |||||||| ||| ||| | ||| ||||||||    
T  19603331 aattatgatgttatgtttgaatgtatgaaattggtgataattgatttgttgttggtgaaattgaatgatcaaagtatatgaaaatg 19603246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 22143377 - 22143444
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||| ||||||  | ||||||||| ||||||||||||||||||||| |||| |||||||||||    
T  22143377 tatgatgatgtgtttgtatgcatgaaatttgtgataattgaattgttgttggtgaatttgcatgttca 22143444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 13376872 - 13376942
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||| ||| |||||||| ||||||||| | ||||||| ||||||||    
T  13376872 aattatgatgatatgtttgaatgcatgaagttgttgataattaaattgttgtcgttgaaatttcatgttca 13376942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 20177409 - 20177339
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||| | | || ||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  20177409 aattatgatgatatgttttaatgcacgaagttgttgataattgaattgttgttggtgaaatttcatgttca 20177339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 20955452 - 20955514
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattg 247  Q
    |||||||||| ||||||||| |  ||||||||||||||||||||  |||||||| ||||||||    
T  20955452 aattatgatgttatgtttgaatgtatgaaattggtgataattgatctgttgttggtgaaattg 20955514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 51627677 - 51627763
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgg 271  Q
    ||||||||||||||| |||| | |||||| ||| |||| ||||||||||||||  ||||| | |||||||| | |||| ||||||||    
T  51627677 aattatgatgatatgcttgaatgcatgaatttgttgatgattgaattgttgttagtgaaacttcatgttcaaagtatgagaaaatgg 51627763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 294
Target Start/End: Original strand, 76458 - 76494
Alignment:
Q  258 atatgtgaaaatgggtatattgtgaattgtgctctaa 294  Q
    ||||||||||| |||||||||||||||||||||||||    
T  76458 atatgtgaaaaagggtatattgtgaattgtgctctaa 76494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 38033688 - 38033772
Alignment:
Q  186 attatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    ||||||||| ||||||||  |  | ||||||| |||||||||||||||||||| |||||||| ||| ||| | ||| ||||||||    
T  38033688 attatgatgttatgtttgtatgtaagaaattgatgataattgaattgttgttggtgaaattgaatgatcaaagtatatgaaaatg 38033772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 244
Target Start/End: Complemental strand, 16656872 - 16656813
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaa 244  Q
    |||||||||| ||||||||| | ||| || ||| |||||||||||||||||||| |||||    
T  16656872 aattatgatgttatgtttgaatgcataaagttgttgataattgaattgttgttggtgaaa 16656813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 22829438 - 22829500
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattg 247  Q
    |||||||||| ||||||||| |  |||||| ||||||||||||| ||||||||  ||||||||    
T  22829438 aattatgatgttatgtttgaatgtatgaaactggtgataattgatttgttgttagtgaaattg 22829500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 27675030 - 27674968
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattg 247  Q
    |||||||||| ||||||||| |  | |||||||||||||||||| ||||| ||| ||||||||    
T  27675030 aattatgatgttatgtttgaatgtaagaaattggtgataattgatttgttattggtgaaattg 27674968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 2787 - 2893
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||||||| ||||||||||||||||    
T  2787 ttatgatgatatgtttgagtacatgaaattggtgataattgaatcgttgttgataaaattgcattttcataatatgtgaaaat-ggtatattgtgaattg 2885  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  2886 tgctctaa 2893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 37790 - 37684
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| | ||||||||||| ||||||||||||||||    
T  37790 ttatgatgatatgtttgagtacatgaaattggtgaaaattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-ggtatattgtgaattg 37692  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  37691 tgctctaa 37684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 8e-40; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 18536988 - 18536881
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||||||||||| |||||||||||||||||||||||| |||||    
T  18536988 ttatgatgatatgtttgagtacatgaatttggtgataattaaattgctgtagatgaaattgcatgttcataatatgtgaaaatgggtatattgtaaattg 18536889  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  18536888 tgctctaa 18536881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 25595252 - 25595146
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  25595252 ttatgatgatatgtttgagtacatgaatttggtgataaatgaattgttgttgatgaaattgcatgtccataatatgtgaaaat-ggtatattgtgaattg 25595154  T
Q  287 tgctctaa 294  Q
    | ||||||    
T  25595153 tactctaa 25595146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 9636977 - 9636871
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||||||||||     
T  9636977 ttatgatgatatgtttgaatacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaatta 9636879  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  9636878 tgctctaa 9636871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 185 - 290
Target Start/End: Original strand, 24087400 - 24087505
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||   |||||  ||||||||||||| |||||    
T  24087400 aattatgatgatatgtttgagcacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatggtatgtataaatgggtatattatgaat 24087499  T
Q  285 tgtgct 290  Q
    ||||||    
T  24087500 tgtgct 24087505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 16292816 - 16292918
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| | |||| |||||| |||||||||| |||||    
T  16292816 ttatgatgatatgtttgagtacatgaaattggtgataattgaactgttgttggtgaaattgcatgttcatagtatgcgaaaat-ggtatattgtcaattg 16292914  T
Q  287 tgct 290  Q
    ||||    
T  16292915 tgct 16292918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 24277993 - 24277887
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  24277993 ttatgatgatatgtttgaatacatgatattggtgacaattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 24277895  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  24277894 tgctctaa 24277887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 194 - 290
Target Start/End: Complemental strand, 20279636 - 20279540
Alignment:
Q  194 gatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgct 290  Q
    |||||||||| ||| ||||| ||| |||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||    
T  20279636 gatatgtttgggtatatgaatttgatgataattgaattgttgttgatgaaattgcatgttcatgatatgtataaatgggtatattgtgaattgtgct 20279540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 275
Target Start/End: Complemental strand, 19660114 - 19660024
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtat 275  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||| |||||| |||||||||||||||| | |||||||||||||||||    
T  19660114 aattatgatgatatgttcgtatacatgaaattggtgataattgaattattgttggtgaaattgcatgttcatagtatgtgaaaatgggtat 19660024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 188 - 294
Target Start/End: Complemental strand, 24884917 - 24884812
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgt 287  Q
    ||||||||||||||||| | |||| |||||||||||||||||||||||||| |||||||||||||||| | ||||||||| | | |||||||||| || |    
T  24884917 tatgatgatatgtttgaatgcatggaattggtgataattgaattgttgttggtgaaattgcatgttcaaagtatgtgaaagt-gatatattgtgagttat 24884819  T
Q  288 gctctaa 294  Q
    |||||||    
T  24884818 gctctaa 24884812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 19666755 - 19666692
Alignment:
Q  192 atgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||| |||| |||||||||||    
T  19666755 atgatatgtttgaatgcatgaaattggtgataattgaattgtttttggtgaatttgcatgttca 19666692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 68226 - 68156
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  68226 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 68156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 38256320 - 38256247
Alignment:
Q  117 ccatgtttggatgttgtataatcatgtcctgcacatccagcaacaaagccagccacactagccgtgcaaattat 190  Q
    |||||||| |||| ||||||||||||||||||||||| | ||||||| ||||| ||||| || |||||||||||    
T  38256320 ccatgttttgatgctgtataatcatgtcctgcacatctaccaacaaaaccagctacactggctgtgcaaattat 38256247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 254
Target Start/End: Original strand, 19669125 - 19669191
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttc 254  Q
    |||| |||||||||||  | |||||||||| |||||||||| ||||||||| |||||||||||||||    
T  19669125 tatggtgatatgtttgtatgcatgaaattgatgataattgagttgttgttggtgaaattgcatgttc 19669191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 722625 - 722540
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    |||||||||  ||||||||| |  |||||||||||||||||||| ||||||||| |||||||| ||| ||| | ||| ||||||||    
T  722625 aattatgatattatgtttgaatgtatgaaattggtgataattgatttgttgttggtgaaattgaatgatcaaagtatatgaaaatg 722540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 253
Target Start/End: Complemental strand, 43646127 - 43646059
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgtt 253  Q
    ||||||| |||||||||||| | |||||| ||| ||||||||| |||||||||| ||||||| ||||||    
T  43646127 aattatgttgatatgtttgaatgcatgaagttgttgataattggattgttgttggtgaaatttcatgtt 43646059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 294
Target Start/End: Complemental strand, 6094896 - 6094842
Alignment:
Q  239 atgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctctaa 294  Q
    ||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||    
T  6094896 atgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattgtgctctaa 6094842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 22775218 - 22775288
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| || ||||||||||||||||| ||||| | ||||||||    
T  22775218 aattatgatgttatgtttgaatgcatgaagttgttggtaattgaattgttgttggtgaaacttcatgttca 22775288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 22780596 - 22780666
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| || ||||||||||||||||| ||||| | ||||||||    
T  22780596 aattatgatgttatgtttgaatgcatgaagttgttggtaattgaattgttgttggtgaaacttcatgttca 22780666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 31146194 - 31146246
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgtt 237  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||    
T  31146194 aattatgatggtatgtttgaatgcatgaagttgttgataattgaattgttgtt 31146246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 23821652 - 23821707
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgat 240  Q
    |||||||||| ||||||||| | || ||| ||| ||||||||||||||||||||||    
T  23821652 aattatgatgttatgtttgaatgcaggaagttgttgataattgaattgttgttgat 23821707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 23830731 - 23830786
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgat 240  Q
    |||||||||| ||||||||| | || ||| ||| ||||||||||||||||||||||    
T  23830731 aattatgatgttatgtttgaatgcaggaagttgttgataattgaattgttgttgat 23830786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 28031293 - 28031348
Alignment:
Q  219 tgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggta 274  Q
    |||||| |||||||||| |||||||||  |||||||| ||| ||||||||||||||    
T  28031293 tgataaatgaattgttggtgatgaaataacatgttcataatgtgtgaaaatgggta 28031348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 217
Target Start/End: Complemental strand, 6094918 - 6094888
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattg 217  Q
    |||||||||||||||||||||||||||||||    
T  6094918 ttatgatgatatgtttgagtacatgaaattg 6094888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 190 - 294
Target Start/End: Complemental strand, 8719 - 8616
Alignment:
Q  190 tgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgc 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| | |||||| ||||||||||    
T  8719 tgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcatagtatgtgaaaat-gatatattatgaattgtgc 8621  T
Q  290 tctaa 294  Q
    |||||    
T  8620 tctaa 8616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0670 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0670
Description:

Target: scaffold0670; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 7690 - 7796
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  7690 ttatgatgatatgtttgactacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 7788  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  7789 tgctctaa 7796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 187 - 281
Target Start/End: Original strand, 895 - 989
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtg 281  Q
    ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  895 ttatgatgatatgtttgagtaaatgaatttggtgataattgaattgttgttgatgaaattgcatgttcataatatgtgaaaatgggtgtattgtg 989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 188 - 294
Target Start/End: Complemental strand, 22230 - 22125
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgt 287  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||||||||||||    
T  22230 tatgatgttatgtttgagtatatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-ggtatattgtgaattgt 22132  T
Q  288 gctctaa 294  Q
    |||||||    
T  22131 gctctaa 22125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 188 - 294
Target Start/End: Complemental strand, 30195 - 30090
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgt 287  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||||| | ||||||||||| | ||||||||||||| |    
T  30195 tatgatgatatgtttgaatacatgaaattggtgataattgaattgttgtaggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaatttt 30097  T
Q  288 gctctaa 294  Q
    |||||||    
T  30096 gctctaa 30090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 975 - 1083
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||| ||||    
T  975 aattatgatgatatgtttgaatacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgggaat 1073  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  1074 tgtgctctaa 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 3483 - 3377
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  3483 ttatgatgatatgtttgaatacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 3385  T
Q  287 tgctctaa 294  Q
     |||||||    
T  3384 ggctctaa 3377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0406 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 14268 - 14162
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||| | ||||||||||| ||||||||||||||||    
T  14268 ttatgatgttatgtttgagtacatgaaattggtgataattgaattattgctggtgaaattgcatgttcatagtatgtgaaaat-ggtatattgtgaattg 14170  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  14169 tgctctaa 14162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 290
Target Start/End: Original strand, 67912 - 68014
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  67912 ttatgatgatatgtttgagtacgtgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 68010  T
Q  287 tgct 290  Q
    ||||    
T  68011 tgct 68014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 108241 - 108135
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| |||||||| ||||||     
T  108241 ttatgatgttatgtttgagtacatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-ggtatattatgaatta 108143  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  108142 tgctctaa 108135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 13590089 - 13590195
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||||||||||| | ||||||||||||||    
T  13590089 ttatgatgatatgtttgggtacatgaaattggtgataattcaattgatgttgatgaaactgcatgttcataatatgtgaaaat-gatatattgtgaattg 13590187  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  13590188 tgctctaa 13590195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 18238172 - 18238278
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||||    
T  18238172 ttatgatgatatgtttgaatacatgatattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaattg 18238270  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  18238271 tgctctaa 18238278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 54398615 - 54398509
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||   ||||||||||||||    
T  54398615 ttatgttgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcatagtatatgaaaat-aatatattgtgaattg 54398517  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  54398516 tgctctaa 54398509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 13442691 - 13442797
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| | ||||||||||| | |||||||||||||     
T  13442691 ttatgatgttatgtttgagtacatgaaattggtgataattgaattgttgtttgtgaaattgcatgttcatagtatgtgaaaat-gttatattgtgaatta 13442789  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  13442790 tgctctaa 13442797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 47468363 - 47468469
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||| | ||||||||||| | |||| |||||||||    
T  47468363 ttatgatgatatgtttgagtacatgaaattgatgataattgaattgttgttggtgaaattgtatgttcatagtatgtgaaaat-gatatagtgtgaattg 47468461  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  47468462 tgctctaa 47468469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 191 - 294
Target Start/End: Original strand, 50219959 - 50220061
Alignment:
Q  191 gatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgct 290  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||| | |||||| |||||||||||    
T  50219959 gatgatatgtttgagtacatgaaattagtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattttgaattgtgct 50220057  T
Q  291 ctaa 294  Q
    ||||    
T  50220058 ctaa 50220061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 187 - 270
Target Start/End: Original strand, 40904949 - 40905032
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||||    
T  40904949 ttatgatgatatgtttgaatacatgaaattgctgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaatg 40905032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 7964725 - 7964795
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  7964725 aattatgatgatatgtttgaatacatgaaattggtgataattgaattgttgttggtgaaattgcatgttca 7964795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 41916741 - 41916847
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| ||||| ||||||||||||||  ||||||||||| |||||||||||||||| | |||||||| || | |||||||||| |||    
T  41916741 ttatgatgatatgtttgaatacataaaattggtgataatataattgttgttggtgaaattgcatgttcatagtatgtgaagat-gatatattgtgagttg 41916839  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  41916840 tgctctaa 41916847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 38764943 - 38764838
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||  ||||||||||| |  |||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||| | ||||||||||||    
T  38764943 aattatggggatatgtttgaatgaatgaaattggtgataattgaattgttgttggtgaaattacatgttcatagtatgtgaaaat-gttatattgtgaat 38764845  T
Q  285 tgtgctc 291  Q
    |||||||    
T  38764844 tgtgctc 38764838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 185 - 291
Target Start/End: Original strand, 41256383 - 41256487
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||||||| ||||| || | ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  41256383 aattatgatgaaatgtt-gaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 41256480  T
Q  285 tgtgctc 291  Q
    | |||||    
T  41256481 tatgctc 41256487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 7185857 - 7185942
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||||||| ||||||| | ||||||||||||    
T  7185857 aattatgatgatatgtttgaatgcatgaaattagtgataattgaattgttgttggtgaaattgtatgttcatagtatgtgaaaatg 7185942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 291
Target Start/End: Original strand, 15013296 - 15013400
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||||||||||||| || | |||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||||||| |  |||||||||||    
T  15013296 aattatgatgatatgtt-gaatgcatgaaattgatgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gacatattgtgaat 15013393  T
Q  285 tgtgctc 291  Q
    | |||||    
T  15013394 tatgctc 15013400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 18276665 - 18276598
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  18276665 tatgatgatatgtttgaatgcatgaaattggtgataattaaattgttgttggtgaaattgcatgttca 18276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 47535078 - 47535148
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||| || |||||    
T  47535078 aattatgatgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaatttcaagttca 47535148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 291
Target Start/End: Complemental strand, 21417532 - 21417435
Alignment:
Q  194 gatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    ||||||||||| ||  |||| ||| ||||||||||||||||| |||||||||| ||||||||| ||||||  ||||  ||||||||||||||||||||    
T  21417532 gatatgtttgaatatgtgaatttgttgataattgaattgttgatgatgaaatttcatgttcacgatatgtataaatatgtatattgtgaattgtgctc 21417435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 271
Target Start/End: Original strand, 13809523 - 13809609
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgg 271  Q
    |||||||||||||||||||| | |||||| ||| || ||||||||||||||||| ||| ||| |||||||| | |||| ||||||||    
T  13809523 aattatgatgatatgtttgaatgcatgaagttgttggtaattgaattgttgttggtgagatttcatgttcaaagtatgagaaaatgg 13809609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 15045062 - 15044992
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  15045062 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 15044992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 15109362 - 15109432
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  15109362 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 15109432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 19559585 - 19559487
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    ||||||||||||| |  | || ||| || |||||||||||||| |||||||||||||||||||  || | || |||||||||  ||||||||| |||||    
T  19559585 tgatatgtttgagcatgttaatttgatgttaattgaattgttgatgatgaaattgcatgttcatgatgtatgtaaatgggtagtttgtgaattatgctc 19559487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 41165959 - 41166029
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||| |||| ||||| | |||||| ||| |||||||||||||||||||  ||||||| ||||||||    
T  41165959 aattatgataatatatttgaatgcatgaagttgttgataattgaattgttgttagtgaaatttcatgttca 41166029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 52265521 - 52265573
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgtt 237  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||    
T  52265521 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgtt 52265573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 49071913 - 49071851
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||  | || ||| || |||||||||| ||| |||||||||||||||||||    
T  49071913 tgatatgtttgagtatgttaatttgatgttaattgaattattgatgatgaaattgcatgttca 49071851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 34177695 - 34177731
Alignment:
Q  219 tgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  34177695 tgataattgaattgttgatgataaaattgcatgttca 34177731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 185 - 294
Target Start/End: Complemental strand, 4839 - 4731
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  4839 aattatggtgatatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 4741  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  4740 tgtgctctaa 4731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 290
Target Start/End: Complemental strand, 25578 - 25476
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| |||||| | ||||||||||| | ||||||||||||||    
T  25578 ttatgatgatatgtttgagtacatgaaattggtgaaaattgaattgttgttggtgaaattgcctgttcatagtatgtgaaaat-gatatattgtgaattg 25480  T
Q  287 tgct 290  Q
    ||||    
T  25479 tgct 25476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 27729 - 27623
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| | ||||||||||| | ||||||||||||||    
T  27729 ttatgatgatatgtttgaatacatgaaattggtgataattgaattgttgttggtgaaatttcatgttcatagtatgtgaaaat-gatatattgtgaattg 27631  T
Q  287 tgctctaa 294  Q
    ||| ||||    
T  27630 tgccctaa 27623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 294
Target Start/End: Complemental strand, 86589 - 86483
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||| |||||||||||||||||||||||| |||||||||||||| |||||| |||||||| ||||||| | ||||||||||| | ||||||||||||||    
T  86589 ttatgttgatatgtttgagtacatgaaatttgtgataattgaatttttgttggtgaaattggatgttcatagtatgtgaaaat-gttatattgtgaattg 86491  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  86490 tgctctaa 86483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 187 - 294
Target Start/End: Original strand, 33428 - 33535
Alignment:
Q  187 ttatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattg 286  Q
    ||||||||||||||||||||||||||| |||||||||||| ||||| ||| |||||||||| ||||||| |||||| |||||| |||||||| | |||||    
T  33428 ttatgatgatatgtttgagtacatgaatttggtgataattaaattgatgtagatgaaattgaatgttcataatatgagaaaataggtatattataaattg 33527  T
Q  287 tgctctaa 294  Q
    ||||||||    
T  33528 tgctctaa 33535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 185 - 291
Target Start/End: Complemental strand, 85766 - 85662
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||| | | ||||||||||||||||||||||||||||||| |||||||||||||||| | ||||||||||| | ||||||||||||    
T  85766 aattatgatgatatgtttaa-tgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 85669  T
Q  285 tgtgctc 291  Q
    | |||||    
T  85668 tatgctc 85662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 189 - 266
Target Start/End: Complemental strand, 53576 - 53499
Alignment:
Q  189 atgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaa 266  Q
    |||||||||||||||| | ||||| ||||||||||||||||||||||||| |||||||||||||||| | ||||||||    
T  53576 atgatgatatgtttgaatgcatgatattggtgataattgaattgttgttggtgaaattgcatgttcaaagtatgtgaa 53499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0253
Description:

Target: scaffold0253; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 185 - 290
Target Start/End: Complemental strand, 7636 - 7532
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||||  ||| | ||||||||||| | ||||||||||||    
T  7636 aattatgatgatatgtttgaatacatgaaattagtgataattgaattattgttggtgaaattgcattctcatagtatgtgaaaat-gatatattgtgaat 7538  T
Q  285 tgtgct 290  Q
    ||||||    
T  7537 tgtgct 7532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0253; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 185 - 290
Target Start/End: Complemental strand, 17061 - 16957
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||| |||||| |||||||||||  ||| | ||||||||||| | ||||||||||||    
T  17061 aattatgatgatatgtttgaatacatgaaattagtgataattgaattattgttggtgaaattgcattctcatagtatgtgaaaat-gatatattgtgaat 16963  T
Q  285 tgtgct 290  Q
    ||||||    
T  16962 tgtgct 16957  T

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Target: scaffold0231 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 12754 - 12855
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctct 292  Q
    ||||||||||||| | ||||||||  | ||||||||||||||| ||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||||    
T  12754 tgatatgtttgaggatatgaaattattcataattgaattgttgatgatgaaattgcatgttcataatatgttaaaatggatatgttgtgaattgtgctct 12853  T
Q  293 aa 294  Q
    ||    
T  12854 aa 12855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 185 - 294
Target Start/End: Original strand, 23685 - 23793
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaat 284  Q
    ||||||| |||||||||||  |||||||||||  ||||||||||||||||||||  ||||||||||||||| | ||||||||||| | ||||||||||||    
T  23685 aattatggtgatatgtttgtatacatgaaatttttgataattgaattgttgttggagaaattgcatgttcatagtatgtgaaaat-gatatattgtgaat 23783  T
Q  285 tgtgctctaa 294  Q
    ||||||||||    
T  23784 tgtgctctaa 23793  T

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Target: scaffold0080; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 43811 - 43881
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  43811 aattatgatgctatgtttgaatgcatgaaattggtgataattgaattgttgttggtgaaatttcatgttca 43881  T

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Target: scaffold0700 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 2759 - 2689
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2759 aattatgatgatatgtttggatgcatgaaattggtgataattgaattgttgttggtgaaattgcatgttca 2689  T

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Target: scaffold0031 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 97211 - 97293
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| | ||| ||||||||||||||||||||||||||| || ||||||||||||| | |||||||||    
T  97211 aattatgatgatatgtttgaatgcataaaattggtgataattgaattgttgttggtggaattgcatgttcaaagtatgtgaaa 97293  T

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Target: scaffold0010 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 31254 - 31172
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||| ||||| | |||||||||||||||||||| |||||||||| |||||||||||||||| | |||||||||    
T  31254 aattatgatgatatatttgaatgcatgaaattggtgataattggattgttgttggtgaaattgcatgttcatagtatgtgaaa 31172  T

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Target: scaffold0077 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 6778 - 6693
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    ||||||| |||||||||| | |||||| |||||||||||||||||||||| ||| |||||||||||||||| | ||||||||||||    
T  6778 aattatggtgatatgtttaaatacatggaattggtgataattgaattgttattggtgaaattgcatgttcatagtatgtgaaaatg 6693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 6109 - 6011
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctc 291  Q
    |||||||||||||||  | |||||| ||||||||||||||||| |||||||||||||||||||  ||||  | |||||||||  |||||||||||||||    
T  6109 tgatatgtttgagtatgttaaattgatgataattgaattgttgatgatgaaattgcatgttcatgatataagtaaatgggtagtttgtgaattgtgctc 6011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 76860 - 76930
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  76860 aattatgatgatatgtttgaatgcatgaaattgttgataattgaattgttgttggtgaaatttcatgttca 76930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 185 - 267
Target Start/End: Original strand, 197266 - 197348
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||||||||||| |||||||||| ||||| | |||||||||    
T  197266 aattatgatgatatgtttgaatgtatgaaattgttgataattgaattgttgttggtgaaattgcaagttcaaagtatgtgaaa 197348  T

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Target: scaffold0483 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 6895 - 6825
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  6895 aattatgatgatatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 6825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 1364 - 1446
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    ||||||||||||||||  | ||| |||||||||||||||| |||||||||| |||||||||||| ||| | ||||||||||||    
T  1364 tatgatgatatgtttgtatgcataaaattggtgataattggattgttgttggtgaaattgcatggtcaaagtatgtgaaaatg 1446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 188 - 270
Target Start/End: Original strand, 9619 - 9701
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatg 270  Q
    ||||||||||||||||  | ||| |||||||||||||||| |||||||||| |||||||||||| ||| | ||||||||||||    
T  9619 tatgatgatatgtttgtatgcataaaattggtgataattggattgttgttggtgaaattgcatggtcaaagtatgtgaaaatg 9701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 1418 - 1349
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| ||||||||||| ||||||||||| |||||||||  |||||||||||||||    
T  1418 aattatgatgatatgtttga-tacatgaaattagtgataattgagttgttgttggggaaattgcatgttca 1349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 185 - 267
Target Start/End: Complemental strand, 69691 - 69609
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaa 267  Q
    |||||||||||||||||| | | |||||||||||| |||||||||||||||| | |||||||||||||| | | |||||||||    
T  69691 aattatgatgatatgtttaaatgcatgaaattggttataattgaattgttgtaggtgaaattgcatgtttaaagtatgtgaaa 69609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 5646 - 5595
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgt 236  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  5646 aattatggtgatatgtttgaatacatgaaattggtgataattgaattgttgt 5595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 263
Target Start/End: Original strand, 22438 - 22513
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgt 263  Q
    ||||||||||||||||  | |||||||||| |||||||| ||||||||||| |||| ||||||||||| |||||||    
T  22438 tatgatgatatgtttgtatgcatgaaattgatgataatttaattgttgttggtgaatttgcatgttcaaaatatgt 22513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 8241 - 8174
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||  | |||||||||| |||||||||||||||||||| |||| |||||||||||    
T  8241 tatgatgatatgtttgtatgcatgaaattgatgataattgaattgttgttggtgaatttgcatgttca 8174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0521 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0521
Description:

Target: scaffold0521; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 11328 - 11258
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | ||||||| | ||||||||||||||||||||  ||||||| ||||||||    
T  11328 aattatgatgatatgtttgaatgcatgaaactagtgataattgaattgttgtttgtgaaatttcatgttca 11258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 2329 - 2399
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||| ||||||||| | |||||| ||| |||||||||||||||||||| ||||||| ||||||||    
T  2329 aattatgatgttatgtttgaatgcatgaagttgttgataattgaattgttgttggtgaaatttcatgttca 2399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 27003 - 27051
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgt 233  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  27003 aattatggtgatatgtttgaatacatgaaattggtgataattgaattgt 27051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1295 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1295
Description:

Target: scaffold1295; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Complemental strand, 332 - 270
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||  | || ||| ||||||||||||||||| |||||||||||||||||||    
T  332 tgatatgtttgagtatgttaatttgatgataattgaattgttgatgatgaaattgcatgttca 270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 1530 - 1592
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||  | || ||| ||||||||||||||||| |||||||||||||||||||    
T  1530 tgatatgtttgagtatgttaatttgatgataattgaattgttgatgatgaaattgcatgttca 1592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 255
Target Start/End: Original strand, 7038 - 7108
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||| ||| |||||||||||||||||||  |||||||  |||||||    
T  7038 aattatgatgatatgtttgaatgcatgaagttgttgataattgaattgttgttagtgaaatttaatgttca 7108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 255
Target Start/End: Complemental strand, 28770 - 28700
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||||||| | |||||| ||| |||||| ||||||||||||| |||||||  |||||||    
T  28770 aattatgatgatatgtttgaatgcatgaacttgttgataactgaattgttgttggtgaaattatatgttca 28700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 188 - 254
Target Start/End: Complemental strand, 79770 - 79704
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttc 254  Q
    ||||||||||||||||  | |||||||||| |||||||||| |||||| || |||||||||||||||    
T  79770 tatgatgatatgtttgtatgcatgaaattgatgataattgagttgttggtggtgaaattgcatgttc 79704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 1562 - 1627
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgtt 253  Q
    ||||||||||||||||  | ||||||||| ||||||||||||||||||||| |||| |||| ||||    
T  1562 tatgatgatatgtttgtatgcatgaaattagtgataattgaattgttgttggtgaatttgcttgtt 1627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 253
Target Start/End: Original strand, 8707 - 8772
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgtt 253  Q
    ||||||||||||||||  | ||||||||| ||||||||||||||||||||| |||| |||| ||||    
T  8707 tatgatgatatgtttgtatgcatgaaattagtgataattgaattgttgttggtgaatttgcttgtt 8772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 209 - 294
Target Start/End: Complemental strand, 12976 - 12891
Alignment:
Q  209 atgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaattgtgctctaa 294  Q
    ||||||||| | ||| |||||||| |  |||||||||||||||||||  ||||||  ||||||||||||| ||| |||||||||||    
T  12976 atgaaattgttcatacttgaattgctaatgatgaaattgcatgttcatgatatgtataaatgggtatattttgatttgtgctctaa 12891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 195 - 255
Target Start/End: Original strand, 22452 - 22512
Alignment:
Q  195 atatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||  | |||||||||| |||||||||||||||||||| |||| |||||||||||    
T  22452 atatgtttgtatgcatgaaattgatgataattgaattgttgttggtgaatttgcatgttca 22512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 104639 - 104706
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||  | ||| |||||| |||||||||||||||||||| |||| ||||| |||||    
T  104639 tatgatgatatgtttgtatgcattaaattgatgataattgaattgttgttggtgaatttgcaggttca 104706  T

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Target: scaffold0063 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 44143 - 44205
Alignment:
Q  193 tgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||  | || ||| || |||||||||||||| |||||||||||||||||||    
T  44143 tgatatgtttgagtatgttaatttgatggtaattgaattgttgatgatgaaattgcatgttca 44205  T

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Target: scaffold0013 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 255
Target Start/End: Complemental strand, 35708 - 35642
Alignment:
Q  189 atgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    |||||||||||||||| | |||||| ||  |||||||||||||||||||  ||||||| ||||||||    
T  35708 atgatgatatgtttgaatgcatgaagttattgataattgaattgttgttagtgaaatttcatgttca 35642  T

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Target: scaffold0013; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 7125 - 7161
Alignment:
Q  219 tgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  7125 tgataattgaattgttgatgatgaatttgcatgttca 7161  T

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Target: scaffold0389 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 255
Target Start/End: Complemental strand, 10893 - 10826
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||  | |||||||||| |||||||||| ||||||| |  ||| |||||||||||    
T  10893 tatgatgatatgtttgtatgcatgaaattgatgataattgagttgttgtcggagaatttgcatgttca 10826  T

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Target: scaffold0118 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 219 - 274
Target Start/End: Original strand, 34467 - 34522
Alignment:
Q  219 tgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggta 274  Q
    |||||| |||||||||| |||||||||  |||||||| ||| ||||||||||||||    
T  34467 tgataaatgaattgttggtgatgaaataacatgttcataatgtgtgaaaatgggta 34522  T

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Target: scaffold0058 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 70323 - 70389
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||  | |||||||||| |||||||| |||| |||||| |||| |||||||||||    
T  70323 tatgatgatatgtttgtatgcatgaaattgatgataattcaattattgttg-tgaatttgcatgttca 70389  T

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Target: scaffold0026 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 188 - 255
Target Start/End: Original strand, 89880 - 89946
Alignment:
Q  188 tatgatgatatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||||||  | |||||||||| ||||| |||||||||||||| |||| ||| |||||||    
T  89880 tatgatgatatgtttgtatgcatgaaattgatgatacttgaattgttgttg-tgaatttgtatgttca 89946  T

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Target: scaffold0079 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 285
Target Start/End: Original strand, 3872 - 3962
Alignment:
Q  195 atatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgttcacaatatgtgaaaatgggtatattgtgaatt 285  Q
    |||||||||||||  | || ||| |||| |||||||||||  |||||||||||||||||||  |||| |  |||||||||  |||||||||    
T  3872 atatgtttgagtatgttaatttgatgatgattgaattgttaatgatgaaattgcatgttcatgatatatataaatgggtagtttgtgaatt 3962  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 253
Target Start/End: Original strand, 19959 - 20016
Alignment:
Q  196 tatgtttgagtacatgaaattggtgataattgaattgttgttgatgaaattgcatgtt 253  Q
    |||||||| |||  |||||||| ||||||||||||||||| ||  |||||||||||||    
T  19959 tatgtttgggtatgtgaaattgatgataattgaattgttgatgtggaaattgcatgtt 20016  T

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Target: scaffold0317 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 255
Target Start/End: Original strand, 12650 - 12686
Alignment:
Q  219 tgataattgaattgttgttgatgaaattgcatgttca 255  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  12650 tgataattgaattattgatgatgaaattgcatgttca 12686  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 116571 - 116619
Alignment:
Q  185 aattatgatgatatgtttgagtacatgaaattggtgataattgaattgt 233  Q
    |||||||||| |||||||||   |||||||||| |||||||||||||||    
T  116571 aattatgatgttatgtttgaaggcatgaaattgttgataattgaattgt 116619  T

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