View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4458_low_44 (Length: 256)

Name: NF4458_low_44
Description: NF4458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4458_low_44
NF4458_low_44
[»] chr5 (56 HSPs)
chr5 (53-241)||(14980006-14980194)
chr5 (61-241)||(43257815-43257998)
chr5 (20-241)||(36660392-36660623)
chr5 (54-241)||(166604-166803)
chr5 (141-241)||(4967446-4967546)
chr5 (131-241)||(31889807-31889917)
chr5 (54-241)||(34919752-34919933)
chr5 (54-238)||(4011618-4011790)
chr5 (109-241)||(12167565-12167700)
chr5 (54-241)||(31557295-31557489)
chr5 (54-238)||(7388150-7388335)
chr5 (61-241)||(36783361-36783553)
chr5 (57-242)||(16886087-16886268)
chr5 (61-224)||(33693746-33693911)
chr5 (54-184)||(42329556-42329700)
chr5 (61-241)||(15400177-15400370)
chr5 (54-241)||(4751485-4751685)
chr5 (128-225)||(39059890-39059987)
chr5 (21-184)||(793616-793793)
chr5 (131-241)||(27652274-27652384)
chr5 (54-241)||(4742221-4742421)
chr5 (131-220)||(8961011-8961099)
chr5 (54-213)||(27810345-27810517)
chr5 (54-121)||(13066712-13066780)
chr5 (54-121)||(29653600-29653668)
chr5 (136-241)||(1513072-1513177)
chr5 (131-184)||(33822513-33822566)
chr5 (15-205)||(33584964-33585168)
chr5 (131-184)||(34171251-34171304)
chr5 (54-121)||(4371362-4371430)
chr5 (54-121)||(38982231-38982299)
chr5 (20-118)||(33822592-33822691)
chr5 (54-121)||(12992063-12992129)
chr5 (20-121)||(17674173-17674275)
chr5 (134-183)||(29044811-29044860)
chr5 (54-121)||(4833719-4833787)
chr5 (54-97)||(27658682-27658726)
chr5 (132-184)||(36296144-36296196)
chr5 (131-182)||(29653526-29653577)
chr5 (184-238)||(24436498-24436552)
chr5 (15-121)||(32963095-32963199)
chr5 (131-241)||(4371451-4371548)
chr5 (133-170)||(4833657-4833694)
chr5 (57-117)||(32690821-32690882)
chr5 (54-118)||(34171163-34171227)
chr5 (136-173)||(38982168-38982205)
chr5 (54-121)||(39059805-39059872)
chr5 (54-115)||(31889741-31889804)
chr5 (131-174)||(32690753-32690796)
chr5 (54-120)||(33741464-33741531)
chr5 (57-115)||(41845374-41845433)
chr5 (172-245)||(17674329-17674402)
chr5 (61-121)||(28640088-28640149)
chr5 (137-182)||(32963022-32963066)
chr5 (134-175)||(33741556-33741597)
chr5 (164-224)||(8755591-8755651)
[»] chr3 (74 HSPs)
chr3 (20-241)||(26965463-26965687)
chr3 (55-241)||(27483148-27483337)
chr3 (54-238)||(2567970-2568157)
chr3 (20-241)||(34059840-34060063)
chr3 (54-238)||(37225553-37225749)
chr3 (53-241)||(19552538-19552730)
chr3 (53-241)||(36771531-36771722)
chr3 (61-238)||(1340887-1341067)
chr3 (20-241)||(25061670-25061891)
chr3 (54-241)||(44648365-44648555)
chr3 (20-241)||(647547-647779)
chr3 (53-241)||(790094-790270)
chr3 (94-236)||(40048925-40049067)
chr3 (55-241)||(38457460-38457658)
chr3 (54-241)||(46362965-46363165)
chr3 (55-236)||(53716029-53716196)
chr3 (54-241)||(83295-83493)
chr3 (131-242)||(2662446-2662557)
chr3 (61-241)||(31290929-31291111)
chr3 (59-238)||(35239390-35239556)
chr3 (53-241)||(43580473-43580677)
chr3 (137-238)||(44854409-44854508)
chr3 (54-205)||(54933194-54933359)
chr3 (53-224)||(9167661-9167831)
chr3 (145-240)||(38165617-38165712)
chr3 (20-171)||(43599855-43600009)
chr3 (128-220)||(41287163-41287255)
chr3 (61-224)||(42740238-42740403)
chr3 (131-241)||(27039415-27039524)
chr3 (131-241)||(5244673-5244782)
chr3 (143-224)||(43736842-43736922)
chr3 (20-184)||(43169299-43169477)
chr3 (54-184)||(2988620-2988763)
chr3 (61-224)||(4476334-4476498)
chr3 (131-241)||(20512449-20512559)
chr3 (131-241)||(54261505-54261615)
chr3 (57-205)||(25722450-25722612)
chr3 (131-184)||(51381814-51381867)
chr3 (57-238)||(22414757-22414948)
chr3 (54-241)||(27027732-27027933)
chr3 (20-103)||(13485909-13485993)
chr3 (131-205)||(43687872-43687946)
chr3 (61-236)||(45095559-45095723)
chr3 (59-121)||(52222831-52222892)
chr3 (131-236)||(4391992-4392088)
chr3 (54-118)||(22730924-22730989)
chr3 (53-121)||(32303991-32304060)
chr3 (131-184)||(53560754-53560807)
chr3 (146-238)||(22731035-22731126)
chr3 (57-184)||(44645340-44645481)
chr3 (131-173)||(3000841-3000883)
chr3 (56-120)||(35099453-35099518)
chr3 (54-118)||(36310339-36310404)
chr3 (131-234)||(43600152-43600257)
chr3 (54-121)||(54261414-54261482)
chr3 (137-184)||(42007072-42007119)
chr3 (131-173)||(16240664-16240706)
chr3 (20-121)||(36541455-36541558)
chr3 (135-184)||(32303915-32303964)
chr3 (131-184)||(36541581-36541634)
chr3 (54-121)||(43687969-43688040)
chr3 (54-121)||(51381720-51381789)
chr3 (173-224)||(43599520-43599571)
chr3 (54-116)||(49470788-49470851)
chr3 (54-118)||(20512585-20512651)
chr3 (54-115)||(52202383-52202445)
chr3 (53-121)||(5244584-5244652)
chr3 (136-173)||(35099389-35099426)
chr3 (57-121)||(43600277-43600341)
chr3 (61-121)||(41287082-41287145)
chr3 (185-241)||(42857046-42857102)
chr3 (55-118)||(42857148-42857212)
chr3 (54-117)||(50420258-50420321)
chr3 (53-116)||(53560663-53560726)
[»] chr4 (61 HSPs)
chr4 (20-238)||(52732560-52732782)
chr4 (53-241)||(43421082-43421273)
chr4 (77-239)||(34360033-34360197)
chr4 (20-236)||(51930561-51930765)
chr4 (54-224)||(15501129-15501302)
chr4 (61-241)||(54512034-54512217)
chr4 (53-241)||(21045150-21045327)
chr4 (131-241)||(44855328-44855438)
chr4 (54-241)||(32140944-32141119)
chr4 (20-234)||(50072242-50072438)
chr4 (54-241)||(36805408-36805600)
chr4 (20-241)||(31817157-31817365)
chr4 (54-236)||(19849079-19849273)
chr4 (54-224)||(37445655-37445837)
chr4 (142-241)||(56422957-56423056)
chr4 (54-237)||(39671068-39671238)
chr4 (131-241)||(34096100-34096210)
chr4 (54-241)||(22212336-22212535)
chr4 (131-238)||(45520419-45520526)
chr4 (54-205)||(24259606-24259771)
chr4 (53-238)||(30022062-30022258)
chr4 (135-241)||(42672477-42672583)
chr4 (17-208)||(35928449-35928650)
chr4 (54-241)||(56556237-56556410)
chr4 (54-184)||(45889559-45889702)
chr4 (54-122)||(6462004-6462073)
chr4 (131-183)||(54233902-54233954)
chr4 (131-238)||(3093433-3093539)
chr4 (57-238)||(11835105-11835295)
chr4 (54-184)||(31941553-31941697)
chr4 (131-241)||(34124381-34124491)
chr4 (53-241)||(47321138-47321341)
chr4 (54-182)||(17499732-17499874)
chr4 (57-184)||(28116243-28116384)
chr4 (174-238)||(45903377-45903441)
chr4 (131-205)||(4408169-4408243)
chr4 (54-118)||(19282501-19282567)
chr4 (20-121)||(29840036-29840139)
chr4 (127-237)||(38761788-38761898)
chr4 (131-235)||(29289852-29289959)
chr4 (61-173)||(31987306-31987430)
chr4 (131-184)||(51434270-51434323)
chr4 (131-173)||(38692474-38692516)
chr4 (152-241)||(51737280-51737367)
chr4 (53-121)||(34124289-34124358)
chr4 (63-241)||(30492732-30492914)
chr4 (54-121)||(51434346-51434414)
chr4 (133-184)||(6462102-6462153)
chr4 (19-182)||(6510078-6510253)
chr4 (131-241)||(17317805-17317910)
chr4 (133-178)||(34534111-34534157)
chr4 (57-114)||(45903501-45903559)
chr4 (135-184)||(55126587-55126636)
chr4 (61-120)||(45520548-45520607)
chr4 (53-103)||(6232141-6232192)
chr4 (53-115)||(38692408-38692471)
chr4 (55-103)||(17317950-17317999)
chr4 (193-241)||(29840201-29840249)
chr4 (74-121)||(44835350-44835398)
chr4 (54-121)||(54091953-54092021)
chr4 (131-183)||(55548234-55548286)
[»] chr2 (47 HSPs)
chr2 (76-241)||(40410473-40410640)
chr2 (15-239)||(29795156-29795383)
chr2 (61-241)||(40987237-40987418)
chr2 (54-221)||(1381748-1381916)
chr2 (54-241)||(4840682-4840881)
chr2 (56-241)||(7743401-7743598)
chr2 (15-224)||(4766184-4766380)
chr2 (131-238)||(1298738-1298845)
chr2 (59-224)||(36360347-36360522)
chr2 (20-224)||(4536538-4536742)
chr2 (54-238)||(34225771-34225944)
chr2 (131-235)||(43460860-43460961)
chr2 (139-225)||(14378219-14378305)
chr2 (131-241)||(24775276-24775386)
chr2 (131-241)||(37106949-37107061)
chr2 (131-198)||(16316796-16316863)
chr2 (20-241)||(43388612-43388845)
chr2 (61-224)||(42969904-42970069)
chr2 (53-121)||(33093365-33093434)
chr2 (54-121)||(18374850-18374918)
chr2 (54-241)||(14698010-14698187)
chr2 (131-224)||(43344195-43344288)
chr2 (134-205)||(775875-775946)
chr2 (54-184)||(2459771-2459915)
chr2 (131-205)||(4566112-4566186)
chr2 (140-242)||(11171839-11171941)
chr2 (54-173)||(1360175-1360306)
chr2 (54-121)||(10580944-10581012)
chr2 (54-184)||(41984416-41984561)
chr2 (131-184)||(25332659-25332712)
chr2 (131-184)||(39866683-39866736)
chr2 (131-183)||(10580869-10580921)
chr2 (187-237)||(44228609-44228659)
chr2 (57-117)||(16316710-16316771)
chr2 (54-121)||(775972-776039)
chr2 (132-184)||(33093458-33093510)
chr2 (61-115)||(14378316-14378371)
chr2 (54-104)||(45148055-45148106)
chr2 (57-102)||(1298885-1298931)
chr2 (54-103)||(6591963-6592013)
chr2 (61-118)||(39866762-39866820)
chr2 (54-118)||(43344312-43344375)
chr2 (136-173)||(14511552-14511589)
chr2 (53-121)||(24775186-24775255)
chr2 (79-120)||(37106886-37106927)
chr2 (53-116)||(25332568-25332631)
chr2 (131-190)||(45147982-45148042)
[»] scaffold0072 (1 HSPs)
scaffold0072 (61-238)||(12040-12219)
[»] chr7 (48 HSPs)
chr7 (20-236)||(28044101-28044319)
chr7 (53-240)||(36447567-36447757)
chr7 (53-241)||(18886667-18886843)
chr7 (54-241)||(32275203-32275393)
chr7 (53-241)||(41905890-41906089)
chr7 (60-237)||(22627313-22627495)
chr7 (53-238)||(33056242-33056433)
chr7 (54-241)||(42121549-42121740)
chr7 (64-241)||(34002087-34002277)
chr7 (53-241)||(17869235-17869435)
chr7 (20-207)||(40207379-40207566)
chr7 (128-234)||(34733394-34733500)
chr7 (54-241)||(3680878-3681077)
chr7 (53-240)||(1103482-1103681)
chr7 (20-241)||(40298812-40299036)
chr7 (131-224)||(42259521-42259614)
chr7 (54-205)||(26963478-26963643)
chr7 (53-241)||(32345789-32345991)
chr7 (9-118)||(36836013-36836123)
chr7 (54-184)||(19906413-19906555)
chr7 (139-238)||(26527356-26527454)
chr7 (131-218)||(42010553-42010640)
chr7 (20-121)||(22597195-22597297)
chr7 (54-118)||(30514972-30515037)
chr7 (131-241)||(48838635-48838750)
chr7 (131-205)||(10684820-10684894)
chr7 (131-205)||(39117479-39117553)
chr7 (20-121)||(19288434-19288536)
chr7 (53-121)||(43813431-43813500)
chr7 (14-183)||(29001577-29001736)
chr7 (54-183)||(31416763-31416906)
chr7 (131-184)||(6521907-6521960)
chr7 (15-120)||(10684918-10685024)
chr7 (131-184)||(19277057-19277110)
chr7 (128-225)||(30833066-30833162)
chr7 (54-182)||(36447083-36447225)
chr7 (57-121)||(42044066-42044131)
chr7 (132-205)||(47272240-47272313)
chr7 (128-224)||(33845391-33845478)
chr7 (61-121)||(19920358-19920419)
chr7 (128-171)||(18733540-18733583)
chr7 (131-169)||(5723090-5723128)
chr7 (54-103)||(18733452-18733502)
chr7 (20-121)||(42259635-42259736)
chr7 (58-121)||(5723006-5723069)
chr7 (131-182)||(36836148-36836199)
chr7 (61-121)||(26527483-26527544)
chr7 (194-235)||(32873127-32873168)
[»] chr1 (56 HSPs)
chr1 (54-241)||(48259818-48260008)
chr1 (54-240)||(11650056-11650254)
chr1 (57-241)||(40060861-40061048)
chr1 (54-237)||(24040983-24041155)
chr1 (54-241)||(84473-84648)
chr1 (131-240)||(52403563-52403672)
chr1 (55-241)||(1430491-1430666)
chr1 (54-241)||(43929683-43929881)
chr1 (20-238)||(5317535-5317765)
chr1 (98-241)||(30006182-30006327)
chr1 (55-236)||(1428865-1429059)
chr1 (15-241)||(28751363-28751602)
chr1 (131-241)||(10690910-10691020)
chr1 (128-241)||(6332251-6332364)
chr1 (54-241)||(12002244-12002443)
chr1 (57-224)||(17919793-17919971)
chr1 (74-241)||(37437358-37437529)
chr1 (131-236)||(43105562-43105667)
chr1 (20-241)||(50349812-50350046)
chr1 (53-241)||(2459005-2459203)
chr1 (54-184)||(38132202-38132322)
chr1 (57-183)||(44582791-44582931)
chr1 (141-225)||(45749470-45749554)
chr1 (54-184)||(26252116-26252260)
chr1 (136-238)||(2245880-2245982)
chr1 (54-198)||(22664937-22665091)
chr1 (54-181)||(254926-255068)
chr1 (54-173)||(12851739-12851870)
chr1 (20-203)||(43755017-43755187)
chr1 (57-205)||(49894807-49894943)
chr1 (141-241)||(44583869-44583968)
chr1 (54-216)||(48319981-48320144)
chr1 (20-179)||(17806392-17806563)
chr1 (172-238)||(50158276-50158342)
chr1 (61-224)||(40719020-40719195)
chr1 (131-184)||(42650261-42650314)
chr1 (57-121)||(45377236-45377301)
chr1 (131-182)||(5854238-5854289)
chr1 (131-177)||(672300-672346)
chr1 (54-241)||(15698705-15698905)
chr1 (131-184)||(28200234-28200287)
chr1 (131-183)||(9552368-9552420)
chr1 (54-121)||(44024543-44024611)
chr1 (133-236)||(43738214-43738317)
chr1 (139-181)||(35149394-35149436)
chr1 (57-116)||(50158397-50158458)
chr1 (54-101)||(9552436-9552484)
chr1 (133-205)||(50591309-50591381)
chr1 (54-115)||(26582923-26582985)
chr1 (61-121)||(2245791-2245852)
chr1 (53-121)||(5854312-5854381)
chr1 (14-43)||(48260021-48260050)
chr1 (54-120)||(15647150-15647215)
chr1 (74-118)||(42650339-42650383)
chr1 (54-117)||(43738344-43738408)
chr1 (53-120)||(44583769-44583837)
[»] chr6 (29 HSPs)
chr6 (17-236)||(1924634-1924855)
chr6 (54-224)||(12828653-12828835)
chr6 (15-241)||(29915499-29915740)
chr6 (54-241)||(31275596-31275796)
chr6 (59-238)||(26669056-26669247)
chr6 (17-241)||(23936538-23936773)
chr6 (54-241)||(29927205-29927405)
chr6 (54-241)||(32258720-32258910)
chr6 (135-236)||(34439368-34439470)
chr6 (54-184)||(17345146-17345290)
chr6 (54-118)||(6143082-6143147)
chr6 (54-182)||(34576542-34576684)
chr6 (54-121)||(4123941-4124009)
chr6 (54-121)||(11785189-11785255)
chr6 (131-197)||(10494760-10494827)
chr6 (133-241)||(4131903-4132008)
chr6 (9-121)||(30627044-30627157)
chr6 (54-118)||(34439503-34439567)
chr6 (54-121)||(4132061-4132129)
chr6 (54-184)||(26189506-26189651)
chr6 (54-119)||(10494850-10494916)
chr6 (54-118)||(6140598-6140662)
chr6 (131-184)||(25932718-25932771)
chr6 (149-184)||(6992508-6992543)
chr6 (137-224)||(30627184-30627262)
chr6 (59-103)||(3015919-3015964)
chr6 (185-234)||(19689809-19689858)
chr6 (133-236)||(4123815-4123918)
chr6 (54-121)||(8052343-8052410)
[»] chr8 (52 HSPs)
chr8 (54-241)||(7612496-7612694)
chr8 (20-241)||(38329010-38329218)
chr8 (17-241)||(45187251-45187476)
chr8 (20-182)||(1774085-1774248)
chr8 (53-241)||(27109775-27109976)
chr8 (20-224)||(22601100-22601315)
chr8 (132-238)||(2067788-2067894)
chr8 (54-241)||(9022393-9022593)
chr8 (20-213)||(29931224-29931419)
chr8 (128-241)||(32326680-32326793)
chr8 (54-240)||(36915365-36915561)
chr8 (131-241)||(6839294-6839404)
chr8 (57-205)||(16208951-16209102)
chr8 (131-241)||(11335994-11336098)
chr8 (59-184)||(34168224-34168355)
chr8 (57-238)||(7129302-7129476)
chr8 (57-207)||(18666534-18666672)
chr8 (55-224)||(30788934-30789115)
chr8 (54-184)||(8471279-8471399)
chr8 (54-173)||(156239-156358)
chr8 (61-224)||(41414847-41415012)
chr8 (139-240)||(32737861-32737961)
chr8 (175-240)||(24732079-24732144)
chr8 (54-205)||(14541737-14541900)
chr8 (131-241)||(11257627-11257736)
chr8 (131-224)||(41790113-41790206)
chr8 (53-174)||(2803268-2803393)
chr8 (56-183)||(34461595-34461737)
chr8 (61-182)||(26438980-26439102)
chr8 (54-118)||(5588563-5588628)
chr8 (146-238)||(5588426-5588517)
chr8 (56-121)||(3095590-3095656)
chr8 (134-184)||(27416593-27416643)
chr8 (183-236)||(2812915-2812968)
chr8 (61-173)||(8382501-8382625)
chr8 (131-184)||(13109076-13109129)
chr8 (131-224)||(39970412-39970496)
chr8 (133-205)||(5044218-5044290)
chr8 (137-237)||(42709949-42710048)
chr8 (64-174)||(8107191-8107304)
chr8 (57-121)||(27416502-27416565)
chr8 (57-118)||(33870755-33870817)
chr8 (54-115)||(35052469-35052531)
chr8 (58-103)||(2067725-2067770)
chr8 (54-121)||(39970323-39970390)
chr8 (54-121)||(42946120-42946188)
chr8 (187-241)||(32061414-32061468)
chr8 (131-169)||(32661392-32661430)
chr8 (184-241)||(3095468-3095525)
chr8 (57-113)||(13108989-13109045)
chr8 (76-121)||(32661326-32661371)
chr8 (54-116)||(11257540-11257601)
[»] scaffold0119 (1 HSPs)
scaffold0119 (59-238)||(1546-1737)
[»] scaffold0580 (2 HSPs)
scaffold0580 (159-238)||(1689-1768)
scaffold0580 (159-238)||(9428-9507)
[»] scaffold0238 (1 HSPs)
scaffold0238 (131-241)||(15995-16104)
[»] scaffold0047 (1 HSPs)
scaffold0047 (54-184)||(70465-70609)
[»] scaffold0194 (2 HSPs)
scaffold0194 (172-241)||(8277-8346)
scaffold0194 (54-116)||(8156-8221)
[»] scaffold0003 (2 HSPs)
scaffold0003 (54-121)||(321724-321792)
scaffold0003 (131-184)||(321815-321868)
[»] scaffold0886 (2 HSPs)
scaffold0886 (131-241)||(4063-4174)
scaffold0886 (54-121)||(4195-4263)
[»] scaffold0189 (1 HSPs)
scaffold0189 (20-241)||(13023-13247)
[»] scaffold0007 (1 HSPs)
scaffold0007 (139-173)||(158195-158229)
[»] scaffold0519 (1 HSPs)
scaffold0519 (131-164)||(7732-7765)


Alignment Details
Target: chr5 (Bit Score: 154; Significance: 9e-82; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 14980194 - 14980006
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgca 151  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||||    
T  14980194 tttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttccttccaactttaccctctccaactttt-tctcacaattttcaatgca 14980096  T
Q  152 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  14980095 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattccatttcttaatctgtg 14980006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 43257998 - 43257815
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatct--tttctcacacaattttcaatgcaacttta 157  Q
    ||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||| ||||  || ||  |||||||||||||||||||||||||||||    
T  43257998 aaaatgaatgtcactttacatttccaatataactttaatttttttctttcaactttatcctcttcaactgttttctcacacaattttcaatgcaacttta 43257899  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    | ||||||| |||||||||||||||||||||||| ||| ||||||||| || |||||||||||||||  |||  ||||||||||    
T  43257898 agtttgtctatttcttataaagtaagggcagtttagtataagtgttatgtctaatgattatttcatttcattctttaatctgtg 43257815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 36660392 - 36660623
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||| |        |||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||    
T  36660392 gtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttacc 36660491  T
Q  119 ctcc---------ccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatcc 209  Q
    |||          ||| |||||||| |||||||||  || ||||||||| ||||||||||||||||||||||||| || ||| ||||||||||||| ||     
T  36660492 ctcaataaatactccagcttttctctcacaattttttatacaactttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtct 36660591  T
Q  210 aatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||||||||  ||| |||||||||||    
T  36660592 aatgattatttcatttcattccttaatctgtg 36660623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 166803 - 166604
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatctttt--ctcacacaat 141  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||          ||| |||||  ||||||||||    
T  166803 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttttctcacacaat 166704  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||||||||| |||||||||||| |||||   ||||||||||| ||||||||||||| || |||||||||||||||  ||| |||||||||||    
T  166703 tttcaatgcaactttaagtttgtctttttcatataatacaagggcagtttagtaaaagtgttatttctaatgattatttcatttcattccttaatctgtg 166604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 141 - 241
Target Start/End: Complemental strand, 4967546 - 4967446
Alignment:
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  4967546 ttttcaatgcaactttaattttgtcttttttttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcattccatttcttaatctgt 4967447  T
Q  241 g 241  Q
    |    
T  4967446 g 4967446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 31889807 - 31889917
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||  ||||||| |||| |||||||||||| ||||    
T  31889807 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtgaaaacgttatattcaataattatttcattccattt 31889906  T
Q  231 cttaatctgtg 241  Q
    |||||||||||    
T  31889907 cttaatctgtg 31889917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 34919752 - 34919933
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||||||| |||||||||| || |||| || |||||||| ||||||| | |||        
T  34919752 ttgtttcaaaatgaatgtcactttacattcctaatataactttaatttttttcttccaacttgactctcctcaacttttctctcacaattattaat---- 34919847  T
Q  153 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
       ||| |||||||||||||||||||||||||||||||| |||||| || ||| |||||||||||||| |||  ||| |||||||||||    
T  34919848 ---taagtttgtctttttcttataaagtaagggcagtttagtaaaattgctatgtccaatgattattttatttcattccttaatctgtg 34919933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 4011790 - 4011618
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    |||||| |||||||| |||| ||||||||||| ||| |||||||||||||| |||||||||||             ||||||||||||||||||||||||    
T  4011790 ttgttttaaaatgaacgtcactttacatttccgatacaactttaatttttttcttccaacttt-------------tttctcacacaattttcaatgcaa 4011704  T
Q  153 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||||||| ||||||||||||||| |||||||| ||| | ||||  |||||||||||||||||||| |||| ||||||||||||    
T  4011703 ctttaattttatctttttcttataaaataagggcattttagaaaaaacgttatatccaatgattatttgattccatttcttaatct 4011618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 241
Target Start/End: Complemental strand, 12167700 - 12167565
Alignment:
Q  109 caactttaccctccccatcttttctcacaca---attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    ||||||||||||| ||| |||||||| ||||   ||||||||||||||||||| |||| | ||||||||||||||||||||||||| ||||||||||| |    
T  12167700 caactttaccctctccaacttttctctcacacaaattttcaatgcaactttaagtttgaccttttcttataaagtaagggcagtttagtaaaagtgtttt 12167601  T
Q  206 atccaatgattatttcattcaatttcttaatctgtg 241  Q
     || ||||||||||||||||||||||||||| ||||    
T  12167600 gtctaatgattatttcattcaatttcttaatttgtg 12167565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 31557489 - 31557295
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctcccca-----tcttttctcacacaattttcaa 147  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||||||||||   ||   |     | || |||||||||||||||||    
T  31557489 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaatttttttcttccaactttattttcaataaatactattctctcacacaattttcaa 31557390  T
Q  148 tgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||| ||||||||||||||||||||| |||||  ||||  ||||||| ||||||  |||||||||||||||| |||||||||| ||||    
T  31557389 tgcaactttaagtttgtctttttcttataaagtaaagggttgtttactaaaagtattatatttaatgattatttcattctatttcttaatatgtg 31557295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 7388335 - 7388150
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    |||||| ||||||||||||| |||| |||| ||||| || ||||||||||  |||||| ||||| ||||  || |||||||| |||||||||||||||||    
T  7388335 ttgttttaaaatgaatgtcactttatattttcaatacaattttaatttttatcttccatctttatcctcttcaacttttctctcacaattttcaatgcaa 7388236  T
Q  153 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||| ||| ||||||||||||||| ||||| || ||| |||||| | |||| || ||||||||||| |||  |||| |||||||    
T  7388235 ctttaaatttatctttttcttataaaataaggacaatttagtaaaaatattatgtctaatgattattttatttcatttattaatct 7388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 36783361 - 36783553
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctc--acacaattttcaat 148  Q
    ||||| ||||||| ||||||||||||||| |||| ||||||||| |||| |||||||||||         | ||| ||||||||  ||||||||||||||    
T  36783361 aaaattaatgtcactttacatttccaatacaactctaatttttttcttctaactttacccttagtaaattctccaacttttctctcacacaattttcaat 36783460  T
Q  149 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||| |||||||||||| ||  ||||||||||| ||| |||||| |||||| || |||||||||||||||  || ||||||||||||    
T  36783461 gcaactttaaatttgtctttttcataacaagtaagggcaatttagtaaaaatgttatgtctaatgattatttcatttcatctcttaatctgtg 36783553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 57 - 242
Target Start/End: Original strand, 16886087 - 16886268
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttc--tcacacaattttcaatgcaac 153  Q
    |||||||||||| |||  ||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||| ||||||  |||||||||||||||||||||    
T  16886087 tttcaaaatgaacgtcgctttgcattttcaatacaactttaatttttttcttccaactttaccctctccaacttttctatcacacaattttcaatgcaac 16886186  T
Q  154 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtgc 242  Q
    |||||        |||| |||||||||||||||||||| ||||| ||||||  || ||| |||||||||||  ||| ||| ||||||||    
T  16886187 tttaa-------gttttgttataaagtaagggcagtttagtaaatgtgttacgtctaataattatttcatttcattccttgatctgtgc 16886268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 224
Target Start/End: Original strand, 33693746 - 33693911
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatctttt--ctcacacaattttcaatgcaacttta 157  Q
    ||||| ||||||| |||||||||  ||||| ||||||||||||| ||||||| |||||| ||| || |||||  ||||||||||||||||||||||||||    
T  33693746 aaaataaatgtcactttacatttttaatatcactttaatttttttcttccaattttaccttcctcaacttttttctcacacaattttcaatgcaacttta 33693845  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |  || |  |||| ||||||| ||||||||| || ||||||||||||  || |||||||||||||||    
T  33693846 agcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttcatt 33693911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 42329700 - 42329556
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 139  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||         |  || ||||    |||||||||    
T  42329700 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatacttcaacttttctctctcacaca 42329601  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  42329600 attttcaatgcaactttaagtttgtcttattcttataaagtaagg 42329556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 15400177 - 15400370
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctcaca--caattttcaat 148  Q
    ||||||||||||| ||||||||||||||| |||||||||||| | |||||||||||| ||||          | | |||||||| ||  |||||| ||||    
T  15400177 aaaatgaatgtcactttacatttccaatacaactttaattttcttcttccaactttatcctcaataaatactcaaacttttctctcatacaatttccaat 15400276  T
Q  149 gcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    | |||||||| |||  |||||||||||||||||| ||| | ||| |||||||||||||||| ||| ||||||||||||||||| ||||||||||    
T  15400277 gaaactttaagttttcctttttcttataaagtaaagggaattttagtaaaagtgttatatctaataattatttcattcaattttttaatctgtg 15400370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 4751685 - 4751485
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctcc---------ccatctttt--ctcacacaa 140  Q
    |||||||||||||||||||| |||| ||||| |||| ||||||||||||||  |||||||||||||||||          ||| |||||  |||||||||    
T  4751685 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 4751586  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    |||||||| ||||||||| ||||| |||||| ||||||  |||||  |||| ||||||||||||| || |||||||||||||||  ||| |||||| |||    
T  4751585 ttttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaagtgttatgtctaatgattatttcatttcattccttaatatgt 4751486  T
Q  241 g 241  Q
    |    
T  4751485 g 4751485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 39059890 - 39059987
Alignment:
Q  128 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 225  Q
    |||||||| |||||||||||||||||||||| ||||| |||||| ||||||  ||||| ||||| ||||||||||||| || ||||||||||||||||    
T  39059890 ttttctcatacaattttcaatgcaactttaagtttgtttttttcatataaaacaagggtagtttagtaaaagtgttatgtctaatgattatttcattc 39059987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 184
Target Start/End: Complemental strand, 793793 - 793616
Alignment:
Q  21 tttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccc 119  Q
    |||||||||||||||| |||||| |       ||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||| |||||    
T  793793 tttcaaaatgagtgtcgctttagccaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactctaccc 793694  T
Q  120 t---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |         |   | ||||    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  793693 tcaataaatacttaaacttttctctctcacacaattttcaatgcaactttaagtttgtcttgttcttataaagtaagg 793616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 27652384 - 27652274
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||  | ||| |||||| ||||||  |   ||| ||||| |||| ||||    
T  27652384 tctcacacaattttcaatgcaactttaaatttgtctttttcttataaagtaaggttattttagtaaaattgttatgacatttgactattttattccattt 27652285  T
Q  231 cttaatctgtg 241  Q
    |||||||||||    
T  27652284 cttaatctgtg 27652274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 4742421 - 4742221
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctcc---------ccatctttt--ctcacacaa 140  Q
    |||||||||||||||||||| |||| ||||| |||| ||||||||||||||  |||||||||||||||||          ||| |||||  |||||||||    
T  4742421 ttgtttcaaaatgaatgtcactttatatttctaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 4742322  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    |||||||| ||||||||| ||||| |||||| ||||||  |||||  |||| ||||||||||||| ||  ||||||||||||||  ||| |||||| |||    
T  4742321 ttttcaattcaactttaagtttgtttttttcatataaaacaagggttgtttagtaaaagtgttatgtctgatgattatttcatttcattccttaatatgt 4742222  T
Q  241 g 241  Q
    |    
T  4742221 g 4742221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 220
Target Start/End: Complemental strand, 8961099 - 8961011
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattattt 220  Q
    |||||||||||||||| ||||||||||| ||| ||||||||||||||| ||| | |||||| ||||||||||||| || |||||||||||    
T  8961099 tctcacacaattttcattgcaactttaaatttatctttttcttataaaataa-gacagtttagtaaaagtgttatgtctaatgattattt 8961011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 213
Target Start/End: Original strand, 27810345 - 27810517
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc--------ccca---tcttttctcacacaat 141  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||| |||||||| ||||        | ||   | ||||||||||||||    
T  27810345 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactttatcctcaataaatactcaaacttttttctcacacaat 27810444  T
Q  142 tttcaatgcaactttaattttgtc-tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatg 213  Q
    ||||||| ||||||||| ||| || |||||| ||||||  || |||||||| ||||||||||||||| |||||    
T  27810445 tttcaatacaactttaaatttatcttttttcatataaaacaatggcagtttagtaaaagtgttatatgcaatg 27810517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 13066712 - 13066780
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||  ||||||||||||||||    
T  13066712 ttgtttcaaaatgaatgtcattttacatttccaatacaactttaattttttttttccaactttaccctc 13066780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 29653668 - 29653600
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||| ||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||    
T  29653668 ttgttgcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttccaactttaccctc 29653600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 241
Target Start/End: Original strand, 1513072 - 1513177
Alignment:
Q  136 cacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaa 235  Q
    |||||||||||| |||||||||| ||||| ||| |||| ||||||||||| ||||||  |||||| |||| |  |||||||||||||||  |||||||||    
T  1513072 cacaattttcaaagcaactttaagtttgtttttctcttgtaaagtaagggtagtttgaaaaaagtattatgtttaatgattatttcatttcatttcttaa 1513171  T
Q  236 tctgtg 241  Q
    | ||||    
T  1513172 tttgtg 1513177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 33822566 - 33822513
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  33822566 tctcacacaattttcaatgcaactttaagtttgtcttgttcttataaagtaagg 33822513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 205
Target Start/End: Complemental strand, 33585168 - 33584964
Alignment:
Q  15 catctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaact 113  Q
    |||| ||||||||||||||||||||||||          |||||| |||||||| |||| ||||||||| ||||| |||||||||||||| |||||||||    
T  33585168 catccgtttcaaaatgagtgtcactttagataaaaaaaattgttttaaaatgaacgtcactttacattttcaatacaactttaatttttttcttccaact 33585069  T
Q  114 ttaccctcc---------ccatcttttct----cacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagt 200  Q
    ||||| ||          ||| |||||||    ||||||||||||||||||||||||| |||||||| ||| | ||||||||||  | ||| |||||| |    
T  33585068 ttaccttcaataaatactccaacttttctgtctcacacaattttcaatgcaactttaagtttgtcttgttcatgtaaagtaaggttattttagtaaaatt 33584969  T
Q  201 gttat 205  Q
    |||||    
T  33584968 gttat 33584964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 34171251 - 34171304
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||| |||||||||||||||||||| |||||||| ||||||||||||||||    
T  34171251 tctcacagaattttcaatgcaactttaagtttgtcttgttcttataaagtaagg 34171304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 4371362 - 4371430
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||||||| |||| ||||||||||||||| |||||||||||||| || | ||||||||||||    
T  4371362 ttgtttcaaaatgaacgtcactttacatttccaatacaactttaatttttttctccaaactttaccctc 4371430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 38982299 - 38982231
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||| ||||||||||||| |||| |||||||||| |||||||||||||| || ||||||||||||||    
T  38982299 ttgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttctcccaactttaccctc 38982231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 33822691 - 33822592
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||| |||||||||||        ||| |||||||||||||||| ||||||||| ||||| |||||||||||| | ||| ||||||||||    
T  33822691 gtttcaaaatgagtatcactttagtcaaaaaaaattgattcaaaatgaatgtcactttacattttcaatacaactttaattttgttctttcaactttacc 33822592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 12992063 - 12992129
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||||||||||||||||| |||||||||| |||| ||||||||||||||  ||||||||||| ||||    
T  12992063 ttgtttcaaaatgaatgtcattttacatttctaatacaactttaatttttt--ttccaactttatcctc 12992129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 17674173 - 17674275
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||| |||||||||||||||||||||        |||||||||||||||||||| ||||| ||| ||||| |||||||||||||| | || ||||||| |    
T  17674173 gttttaaaatgagtgtcactttagtcaaataaaattgtttcaaaatgaatgtcactttacgttttcaataaaactttaattttttacgtctaactttatc 17674272  T
Q  119 ctc 121  Q
    |||    
T  17674273 ctc 17674275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 29044811 - 29044860
Alignment:
Q  134 cacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 183  Q
    ||||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  29044811 cacacaattttcaatgcaactttaagtttatcttattcttataaagtaag 29044860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 4833787 - 4833719
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||||||||||   ||||||||| ||||  |||||||||||||| |||||||||||||||||    
T  4833787 ttgtttcaaaatgaatgttgctttacattttcaatgcaactttaatttttttcttccaactttaccctc 4833719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 97
Target Start/End: Complemental strand, 27658726 - 27658682
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaa 97  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  27658726 ttgtttcaaaatgaatgtcactttacatttccaatataactttaa 27658682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 36296196 - 36296144
Alignment:
Q  132 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||||||||||| |||||||| ||| |||||| |||||    
T  36296196 ctcacacaattttcaatgcaactttaagtttgtcttgttcctataaattaagg 36296144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 29653577 - 29653526
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 182  Q
    |||||||||||||  ||||||||||||| |||||||| ||||||||||||||    
T  29653577 tctcacacaatttctaatgcaactttaagtttgtcttgttcttataaagtaa 29653526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 24436552 - 24436498
Alignment:
Q  184 ggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||| |||||||||||||||||||| |||||||||||||||  ||| ||||||||    
T  24436552 ggcattttggtaaaagtgttatatctaatgattatttcattttattccttaatct 24436498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 121
Target Start/End: Complemental strand, 32963199 - 32963095
Alignment:
Q  15 catctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaact 113  Q
    |||| |||| |||||||||||||||||||||       |||||||||||||||||  || ||||||||||||||| ||||||| ||||||  ||| ||||    
T  32963199 catccgttttaaaatgagtgtcactttagtcaaaaag-tttgtttcaaaatgaataccactttacatttccaatacaactttattttttt--ttcaaact 32963103  T
Q  114 ttaccctc 121  Q
    ||||||||    
T  32963102 ttaccctc 32963095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 4371451 - 4371548
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||||||||||||||||||||||    ||||||||||||||         |||||||| ||||||||| ||| || |||||||||||||||| |||     
T  4371451 tctcacacaattttcaatgcaacttt----ttgtctttttctta---------ggcagtttagtaaaagtgctatgtctaatgattatttcattccattc 4371537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 4833694 - 4833657
Alignment:
Q  133 tcacacaattttcaatgcaactttaattttgtcttttt 170  Q
    |||||||||||||||||||||||||| |||||||||||    
T  4833694 tcacacaattttcaatgcaactttaagtttgtcttttt 4833657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 117
Target Start/End: Complemental strand, 32690882 - 32690821
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttac 117  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||| ||  |||||||||    
T  32690882 tttcaaaatgaatgtcactttacatttcaaatacaactttaatttttttctctcaactttac 32690821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 34171163 - 34171227
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||| ||||||||||||| ||||||||| ||||| ||||||||||||||  |||||||||||||    
T  34171163 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttt-tttccaactttacc 34171227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 38982205 - 38982168
Alignment:
Q  136 cacaattttcaatgcaactttaattttgtctttttctt 173  Q
    ||||||||||||||||||||||| ||||||||||||||    
T  38982205 cacaattttcaatgcaactttaagtttgtctttttctt 38982168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 39059805 - 39059872
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||||||||||   ||||||||| ||||| |||||||||||||| |||| ||||||||||||    
T  39059805 ttgtttcaaaatgaatgttgctttacattttcaatacaactttaatttttt-cttctaactttaccctc 39059872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 31889741 - 31889804
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaa-ttttttccttccaacttt 115  Q
    |||||||||||| ||||||| ||||||||||||||| |||||||| ||||||  ||||||||||    
T  31889741 ttgtttcaaaataaatgtcactttacatttccaatacaactttaatttttttttttccaacttt 31889804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 174
Target Start/End: Complemental strand, 32690796 - 32690753
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttctta 174  Q
    |||| ||||||||||||||||||||||  |||||||||||||||    
T  32690796 tctcgcacaattttcaatgcaactttaggtttgtctttttctta 32690753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 33741464 - 33741531
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct 120  Q
    ||||||||| |||||||||| ||||||||| ||||  |||||| ||||||| |||| |||||||||||    
T  33741464 ttgtttcaatatgaatgtcactttacattttcaatgcaactttcatttttttcttcaaactttaccct 33741531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 41845433 - 41845374
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaacttt 115  Q
    ||||||||||||||||| ||||||||| ||||| || ||||||||||| ||| |||||||    
T  41845433 tttcaaaatgaatgtcactttacattttcaatacaattttaatttttttctttcaacttt 41845374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 245
Target Start/End: Original strand, 17674329 - 17674402
Alignment:
Q  172 ttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtgctcc 245  Q
    ||||||||||||||||||||  ||||| |||||| |  |||||||||||||||  |||| ||||| ||| ||||    
T  17674329 ttataaagtaagggcagtttaataaaaatgttatgtttaatgattatttcatttcattttttaatatgtactcc 17674402  T

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Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 28640088 - 28640149
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||| ||||||| ||||||||| ||||  |||||||||||||| || ||||||||||||||    
T  28640088 aaaataaatgtcactttacattttcaattcaactttaatttttttctcccaactttaccctc 28640149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 137 - 182
Target Start/End: Complemental strand, 32963066 - 32963022
Alignment:
Q  137 acaattttcaatgcaactttaattttgtctttttcttataaagtaa 182  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  32963066 acaatttccaatgcaa-tttaagtttgtctttttcttataaagtaa 32963022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 175
Target Start/End: Original strand, 33741556 - 33741597
Alignment:
Q  134 cacacaattttcaatgcaactttaattttgtctttttcttat 175  Q
    |||||||||| |||||||||||||| ||| ||||||||||||    
T  33741556 cacacaatttccaatgcaactttaagtttatctttttcttat 33741597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 224
Target Start/End: Complemental strand, 8755651 - 8755591
Alignment:
Q  164 tctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |||||||||||||||  |||| ||||||  |||||||||||| ||  ||||||||||||||    
T  8755651 tctttttcttataaaaaaaggacagtttaataaaagtgttatgtctgatgattatttcatt 8755591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 1e-71; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 26965687 - 26965463
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||| ||||||||||||||||||| |        |||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||    
T  26965687 gttttaaaatgagtgtcactttagccaaaaaatattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttacc 26965588  T
Q  119 ctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgatt 216  Q
    ||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  26965587 ctctccaacttttctctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatccaatgatt 26965488  T
Q  217 atttcattcaatttcttaatctgtg 241  Q
    ||||||||  |||||||||||||||    
T  26965487 atttcattttatttcttaatctgtg 26965463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 55 - 241
Target Start/End: Complemental strand, 27483337 - 27483148
Alignment:
Q  55 tgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacaca--attttcaatgca 151  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| ||| |||||||| ||||  ||||||||||||    
T  27483337 tgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctctccaacttttctctcacataattttcaatgca 27483238  T
Q  152 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||| |||||||||||||||||||||||||| | ||| ||||||||||||| || |||||||||||||||  ||| |||||| ||||    
T  27483237 actttaagtttgtctttttcttataaagtaagggaaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaatttgtg 27483148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 2568157 - 2567970
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcccca--tcttttctcacacaattttcaatgc 150  Q
    |||||| ||||||||||| | ||||||||| ||||| |||||||||||||| ||||||||||||||||  | |  | || ||||||||||||||||||||    
T  2568157 ttgttttaaaatgaatgttactttacattttcaatacaactttaatttttttcttccaactttaccctttctaatttttctctcacacaattttcaatgc 2568058  T
Q  151 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||||| ||||||||||||||||||||||||| || ||| |||||||||||||||| |||||||||||||||||||| ||||||||    
T  2568057 aactttaagtttgtctttttcttataaagtaaggacatttttgtaaaagtgttatatctaatgattatttcattcaattccttaatct 2567970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 34059840 - 34060063
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnn-tttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttac 117  Q
    |||| |||||||||||||||||||||        ||||||| |||||||||||||||| |||||| ||||| |||||||||||||| ||| |||||||||    
T  34059840 gttttaaaatgagtgtcactttagtcaaaaaaaatttgttttaaaatgaatgtcattttacattttcaatacaactttaatttttttctttcaactttac 34059939  T
Q  118 cctccccatcttttctcac--acaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgat 215  Q
    |||| ||| |||||||| |  ||||||||||||||||||||||||  ||||||||||||||||||||||| ||||| ||||||   ||||||||||| ||    
T  34059940 cctctccaacttttctctcgcacaattttcaatgcaactttaatt--gtctttttcttataaagtaagggtagtttagtaaaaactttatatccaattat 34060037  T
Q  216 tatttcattcaatttcttaatctgtg 241  Q
    |||||||||| |||||||||||||||    
T  34060038 tatttcattccatttcttaatctgtg 34060063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 54 - 238
Target Start/End: Complemental strand, 37225749 - 37225553
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaat 141  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||||||||||||||||          | | ||||||||  |||||||    
T  37225749 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattcttttcttccaactttaccctcaataaatacgctaacttttctctcacacaat 37225650  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||  ||||||||||||    
T  37225649 tttcaatgcaactttaattttgtctttttcttataaagtaaggacagtttagtaaaagtattatatccaatgattatttcattgtatttcttaatct 37225553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 19552538 - 19552730
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacaca--attttcaatg 149  Q
    ||||||| ||||||||||||| ||||||||| ||||| |||||||| ||||| ||||||||||||||||| | | |||||||| ||||  ||||||||||    
T  19552538 tttgttttaaaatgaatgtcactttacattttcaatacaactttaaattttttcttccaactttaccctctctaacttttctctcacagaattttcaatg 19552637  T
Q  150 caactttaattttgtctttttcttataaagtaagggcagtttggt-aaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||||||| ||||||||||||||||||| |||||| || ||||  ||||||||||||||||||||||||  |||||||||| ||||    
T  19552638 caactttaattttgtatttttcttataaagtaaggacagtttagtaaaaaacgttatatccaatgattatttcatttcatttcttaatttgtg 19552730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 36771722 - 36771531
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatg 149  Q
    ||||||| ||||||||||||| ||||||||| ||||| |||||||||||||| ||| |||||||| |||| ||| ||||||||  |||||||||||||||    
T  36771722 tttgttttaaaatgaatgtcactttacatttacaatacaactttaattttttactttcaactttatcctctccaacttttctctcacacaattttcaatg 36771623  T
Q  150 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||| ||||||||||||||||||| |||| ||||||| |||||| | |||| || ||| |||||||||||  |||||||||| ||||    
T  36771622 caactttaagtttgtctttttcttataaaataagagcagtttagtaaaaatattatgtctaataattatttcattatatttcttaatatgtg 36771531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 61 - 238
Target Start/End: Complemental strand, 1341067 - 1340887
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaacttta 157  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||| |||||||| |||||||| ||| ||||||||  |||||||||||||||||||||||    
T  1341067 aaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacgttaccctctccaacttttctctcacacaattttcaatgcaacttta 1340968  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    | ||||||||||||||||||||||| | || ||| | ||||||||||| || ||| |||||||||||| |||  |||||||    
T  1340967 agtttgtctttttcttataaagtaaagacactttagaaaaagtgttatgtctaattattatttcattccattctttaatct 1340887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 25061670 - 25061891
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||| |       || |||| |||||||||| || ||||||||||||||| |||||||||||||| || ||||||||||     
T  25061670 gtttcaaaatgagtgtcactttagccaaaaaaatt-gttttaaaatgaatgccactttacatttccaatacaactttaatttttttctcccaactttact 25061768  T
Q  119 ctccccatcttttctcaca--caattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgatt 216  Q
    ||| ||| |||||||| ||  ||||||||||||||||||||| |||||  ||||||||||||||||||| ||||| ||||||||||||| || |||||||    
T  25061769 ctctccaacttttctctcatacaattttcaatgcaactttaagtttgt--ttttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgatt 25061866  T
Q  217 atttcattcaatttcttaatctgtg 241  Q
    ||||||||  ||| |||||| ||||    
T  25061867 atttcatttcattccttaatatgtg 25061891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 44648555 - 44648365
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatctttt--ctcacacaattttcaatgc 150  Q
    |||||| ||||||||||||| ||||||||||||||| ||||||| ||||||  |||||||||||| ||| ||| |||||  ||||||||||||||||| |    
T  44648555 ttgttttaaaatgaatgtcactttacatttccaatacaactttatttttttt-ttccaactttactctctccaacttttttctcacacaattttcaattc 44648457  T
Q  151 aactttaattttgtcttttt-cttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||| ||||||||||| || ||||||||| |||||||| ||||||||||||| || |||||||||||||||  ||| |||||||||||    
T  44648456 aactttaagtttgtcttttttctcataaagtaaaggcagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaatctgtg 44648365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 647779 - 647547
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||  |       ||||||| ||||||| | |||||| |||||| ||||| |||||||||||||| ||||||||||||||    
T  647779 gtttcaaaatgagtgtcactttaaccaaaaaaatttgtttaaaaatga-tatcattttacattttcaatacaactttaatttttttcttccaactttacc 647681  T
Q  119 ctcc---------ccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 207  Q
    |||          | | ||||||||  ||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  647680 ctcaataaatactctaacttttctcttacagaattttcaatgcaactttaagtttgtctttttcttataaagtaagggcagtttagtaaaactgttatat 647581  T
Q  208 ccaatgattatttcattcaatttcttaatctgtg 241  Q
    | |||||||||||||||  |||||||||||||||    
T  647580 ctaatgattatttcatttcatttcttaatctgtg 647547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 790094 - 790270
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgca 151  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||||||| |||| |||||| |             ||||||||||||| |||||||    
T  790094 tttgtttcaaaattaatgtcactttacatttccaatacaactttaatttttttcttcaaacttttc-------------tctcacacaatttccaatgca 790180  T
Q  152 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||  |||||||||| ||||    
T  790181 actttaattttgactttttcttataaagtaagggcagtttagtaaaagcgttatattcaatgattatttcattacatttcttaatatgtg 790270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 94 - 236
Target Start/End: Original strand, 40048925 - 40049067
Alignment:
Q  94 ttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttgg 193  Q
    |||||||||| |||||| |||||||||| ||| |||||||| || |||||||||||||||||||| ||||||||||||||||||||||| |||| |||      
T  40048925 ttaatttttttcttccagctttaccctctccaacttttctctcataattttcaatgcaactttaaatttgtctttttcttataaagtaaaggcaatttaa 40049024  T
Q  194 taaaagtgttatatccaatgattatttcattcaatttcttaat 236  Q
    |||||||||||| || |||||||||||||||| ||| ||||||    
T  40049025 taaaagtgttatgtctaatgattatttcattccattccttaat 40049067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 55 - 241
Target Start/End: Original strand, 38457460 - 38457658
Alignment:
Q  55 tgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaatt 142  Q
    ||||||||||||||| |||||| |||||| ||||| |||||||||||||| | |||||||||||||||          ||| ||||||||  ||||||||    
T  38457460 tgtttcaaaatgaatatcattttacattttcaatacaactttaatttttttcatccaactttaccctcaataaatactccaacttttctctcacacaatt 38457559  T
Q  143 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||| ||||| ||| ||||||||| ||||||||| |||||||| ||||||||||||| |  ||||||||||||||||||||||||||| ||||    
T  38457560 ttcaatgcaattttaagtttatctttttctaataaagtaatggcagtttagtaaaagtgttatgtgtaatgattatttcattcaatttcttaatttgtg 38457658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 46363165 - 46362965
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctcc---------ccatcttttctc--acacaa 140  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||  |||||||||||||||||          ||| ||||||||  ||||||    
T  46363165 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcacacaa 46363066  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    ||| |||||||||||||| ||||| ||||||||||||||||||| |||||| |||||| |||||  || |||||||||||||||||||| |||||| |||    
T  46363065 tttacaatgcaactttaaatttgtatttttcttataaagtaaggacagtttagtaaaaatgttaggtctaatgattatttcattcaattccttaatatgt 46362966  T
Q  241 g 241  Q
    |    
T  46362965 g 46362965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 55 - 236
Target Start/End: Original strand, 53716029 - 53716196
Alignment:
Q  55 tgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaac 153  Q
    ||||| ||||||||||| | ||||||||||||||| |||||||||||||| ||||||||||| |             ||||||||| |||||||||||||    
T  53716029 tgttttaaaatgaatgttactttacatttccaatacaactttaatttttttcttccaacttttc-------------tctcacacagttttcaatgcaac 53716115  T
Q  154 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 236  Q
    |||||||  ||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||  ||||||||||    
T  53716116 tttaatt--gtctttttcttataaagtaagagcagtttagtaaaagcgttatatccaatgattatttcatttcatttcttaat 53716196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 83295 - 83493
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctcacac--aat 141  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||||||||||| ||||||||||||||||          | | |||||||| |||  |||    
T  83295 ttgtttcaaaatgaatgtcattttacattttcaatacaactttaattttttc-ttccaactttaccctcattaaatactctaacttttctctcacgcaat 83393  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| | || |||||||| ||||||  ||| |||||| ||||    
T  83394 tttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttgtgtctaatgattaattcatttcattccttaatttgtg 83493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 2662557 - 2662446
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| ||||||||||||| || |||||||||||||||  |||     
T  2662557 tctcacacaattttcaatgcaactttaaatttgtctttttcttataaaataagggcaatttagtaaaagtgttatgtctaatgattatttcatttgattc 2662458  T
Q  231 cttaatctgtgc 242  Q
     |||||||||||    
T  2662457 tttaatctgtgc 2662446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 31291111 - 31290929
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaacttta 157  Q
    ||||||||| ||| |||||||||| |||| |||||||||||||| ||| ||||||||  |||  || ||||||||  |||||||||||| ||||||||||    
T  31291111 aaaatgaatatcactttacatttctaatacaactttaatttttttctttcaactttatgctcttcaacttttctctcacacaattttcattgcaacttta 31291012  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    | ||| ||||||||| ||||| ||| |||||||| ||||||||||||| || ||| |||||||||||  ||| |||||||||||    
T  31291011 agttt-tctttttctaataaaataaaggcagtttagtaaaagtgttatgtctaataattatttcatttcattccttaatctgtg 31290929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 59 - 238
Target Start/End: Original strand, 35239390 - 35239556
Alignment:
Q  59 tcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaacttta 157  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||||| |||||||||| |             |||||||||||||||| ||||||||||    
T  35239390 tcaaaatgaatgtcactttacatttctaatacaactttaattttttc-ttccaacttttc-------------tctcacacaattttcactgcaacttta 35239475  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    | ||||||||||||||||||||||||| |||||| |||||| ||||||  | ||||||||||| ||||||||| |||||||    
T  35239476 agtttgtctttttcttataaagtaaggacagtttagtaaaaatgttatgcctaatgattattttattcaattttttaatct 35239556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 43580473 - 43580677
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccct---------ccccatctttt---ctcacac 138  Q
    ||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||  ||||||||||||||||         | ||| |||||   |||||||    
T  43580473 tttgtttcaaaataaatgtcactttacattttcaatacaactttaattttttttcttccaactttacccttaataaatactccaactttttttctcacac 43580572  T
Q  139 aattttcaatgcaactttaattttgtctttttc--ttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 236  Q
    |||||||||||||||||||| ||||||||||||   ||||||  ||||||||||| |||||| ||||||||  |||||||||||||||| ||| ||||||    
T  43580573 aattttcaatgcaactttaaatttgtctttttcatatataaaacaagggcagtttagtaaaaatgttatatgtaatgattatttcattctattccttaat 43580672  T
Q  237 ctgtg 241  Q
    |||||    
T  43580673 ctgtg 43580677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 137 - 238
Target Start/End: Original strand, 44854409 - 44854508
Alignment:
Q  137 acaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 236  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||  | || ||||||||||||||||||||  |||||    
T  44854409 acaattttcaatgcaactttaagtttgtatttttcttataaagtaagggcagtttagtaaaagtgt--tgtctaatgattatttcattcaattcattaat 44854506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 54933359 - 54933194
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 139  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||         | ||| ||||    |||||||||    
T  54933359 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 54933260  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||  | ||| |||||| ||||||    
T  54933259 attttcaatgcaactttaagtttgtcattttcttataaagtaaggttattttagtaaaattgttat 54933194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 53 - 224
Target Start/End: Complemental strand, 9167831 - 9167661
Alignment:
Q  53 tttgtttcaaaatgaatgtcatttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    |||||||||||| |||| |  |||| |||| ||||| |||||||||||||| ||||| |||||||| ||  || |||||||  ||| |||||||||||||    
T  9167831 tttgtttcaaaacgaatcttttttatattttcaatacaactttaatttttttcttcctactttaccatcttcaacttttctttcacgattttcaatgcaa 9167732  T
Q  153 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
     ||||| ||| | ||||| | |||||||||||||||||| |||||| |||||| |  |||||||||||||||    
T  9167731 ttttaagttt-tttttttttaataaagtaagggcagtttagtaaaaatgttatgtgaaatgattatttcatt 9167661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 38165712 - 38165617
Alignment:
Q  145 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||| ||||||||||||| |  |||||||||||||||  ||| ||||||||||    
T  38165712 caatgcaactttaagtttgtctttttcttataaagtaaggacagtttagtaaaagtgttatgtttaatgattatttcattacattccttaatctgt 38165617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 171
Target Start/End: Complemental strand, 43600009 - 43599855
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttacc 118  Q
    ||||||||||||| || |||||||||       |||||||||||||||||||| ||| ||||||   ||| |||||||||||||| |||  |||||||||    
T  43600009 gtttcaaaatgagggttactttagtcaaacaaatttgtttcaaaatgaatgtcgttttacatttttcatacaactttaatttttttcttttaactttacc 43599910  T
Q  119 ctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttc 171  Q
    ||| ||| ||||||||  |||||||||| ||||||||||||| ||||||||||||    
T  43599909 ctctccaacttttctctcacacaatttttaatgcaactttaagtttgtctttttc 43599855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 41287163 - 41287255
Alignment:
Q  128 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattattt 220  Q
    ||||||||||||||||||||||||||||||| ||||  |||||| |||||| |||| ||||||| ||||||||||||| || |||||||||||    
T  41287163 ttttctcacacaattttcaatgcaactttaagtttgagtttttcatataaaataagtgcagtttagtaaaagtgttatgtctaatgattattt 41287255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 224
Target Start/End: Original strand, 42740238 - 42740403
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatctttt--ctcacacaattttcaatgcaacttta 157  Q
    ||||| ||||||| |||| ||||  ||||| ||||||||||||| ||||||| |||||| ||| || |||||  ||||||||||||||||||||||||||    
T  42740238 aaaataaatgtcactttatatttttaatatcactttaatttttttcttccaattttaccttcctcaacttttttctcacacaattttcaatgcaacttta 42740337  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |  || |  |||| ||||||| ||||||||| || ||||||||||||  || |||||||||||||||    
T  42740338 agcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttcatt 42740403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 27039415 - 27039524
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtc-tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatt 229  Q
    |||||||||||||||||||||||||||| |||||| ||||| ||||||||||||| || ||| |||||||||||||||  ||||||  |||||||| |||    
T  27039415 tctcacacaattttcaatgcaactttaaatttgtctttttttttataaagtaaggacactttagtaaaagtgttatatttaatgat--tttcattccatt 27039512  T
Q  230 tcttaatctgtg 241  Q
     |||||| ||||    
T  27039513 acttaatatgtg 27039524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 5244673 - 5244782
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||||  ||||||||||||||||||| ||||| |||||||||||| |||| |  | |||  |||||||||||| || |||||||||||||||||||||    
T  5244673 tctcacattattttcaatgcaactttaagtttgtttttttcttataa-gtaaagagactttaataaaagtgttatgtctaatgattatttcattcaattt 5244771  T
Q  231 cttaatctgtg 241  Q
    |||||| ||||    
T  5244772 cttaatatgtg 5244782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 143 - 224
Target Start/End: Complemental strand, 43736922 - 43736842
Alignment:
Q  143 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |||||||||||||||| ||| ||||||||||||||| |||| | ||||| |||||||||||||||| |||||||||||||||    
T  43736922 ttcaatgcaactttaagttt-tctttttcttataaaataagagtagtttagtaaaagtgttatatctaatgattatttcatt 43736842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 184
Target Start/End: Original strand, 43169299 - 43169477
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttacc 118  Q
    |||| |||||||||||| ||||||||        ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||| |||||||||    
T  43169299 gttttaaaatgagtgtcgctttagtcaaaaaaaattgtttcaaaatgaatgtcattttacatttccaatacaactttaatttttttcttctaactttacc 43169398  T
Q  119 ct---------ccccatcttt----tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
     |         | | | ||||    |||||||||||||||||| ||||||||| |||||||| ||||||||||||||||    
T  43169399 ttcaataaatactcaaacttttatctctcacacaattttcaatacaactttaagtttgtcttattcttataaagtaagg 43169477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 2988763 - 2988620
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 139  Q
    |||||||||||||||||||| ||||||||||||||| || ||||||||||| ||||||||||||||||         | | | ||||    |||| ||||    
T  2988763 ttgtttcaaaatgaatgtcactttacatttccaatacaa-tttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcgcaca 2988665  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  2988664 attttcaatgcaactttaagtttgtcttgttcttataaagtaagg 2988620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 224
Target Start/End: Complemental strand, 4476498 - 4476334
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatctttt--ctcacacaattttcaatgcaacttta 157  Q
    ||||| ||||||| |||||||||  ||||| | ||||||||||| ||| ||| |||||| ||| || |||||  ||||||||||||||||||||||||||    
T  4476498 aaaataaatgtcactttacatttttaatatcattttaatttttttctttcaattttaccttcctcaacttttttctcacacaattttcaatgcaacttta 4476399  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |  || | | ||| ||||||| ||||||||| || ||||||||||||  || |||||||||||||||    
T  4476398 agcttat-tattttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttcatt 4476334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 20512559 - 20512449
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| || |||  |   ||| ||||| |||||||||    
T  20512559 tctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgctatgacatttgactattttattcaattt 20512460  T
Q  231 cttaatctgtg 241  Q
    |||||||||||    
T  20512459 cttaatctgtg 20512449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 54261505 - 54261615
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||  |   ||| || || |||||||||    
T  54261505 tctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaattt 54261604  T
Q  231 cttaatctgtg 241  Q
    |||||||||||    
T  54261605 cttaatctgtg 54261615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 205
Target Start/End: Complemental strand, 25722612 - 25722450
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctc----acacaatt 142  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||| ||||  ||||||||||         | ||| ||||||||    ||||||||    
T  25722612 tttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttcatactttaccctaaataaatactccaacttttctctctcacacaatt 25722513  T
Q  143 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    |||||||||||||||| |||||||| ||||| ||||||||||  | ||| |||||| ||||||    
T  25722512 ttcaatgcaactttaagtttgtcttattcttgtaaagtaaggttattttagtaaaattgttat 25722450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 51381814 - 51381867
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  51381814 tctcacacaattttcaatgcaactttaagtttgtctttttattataaagtaagg 51381867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 22414757 - 22414948
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctcc---------ccatcttttctcacacaattttc 145  Q
    ||||||||||||||||| |||||||||  |||||||||||||||||||  |||||||||||||| ||          | | ||| ||| |||||||||||    
T  22414757 tttcaaaatgaatgtcactttacatttttaatataactttaattttttttcttccaactttaccttcaataaatactcaaccttctcttacacaattttc 22414856  T
Q  146 aatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    ||||||||||||| ||| || |||||||||||| ||  || |||||  ||||||| |||| || ||| |||||||||||  ||||||||||||    
T  22414857 aatgcaactttaagtttctc-ttttcttataaactataggtagtttaataaaagtattatgtctaataattatttcatttcatttcttaatct 22414948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 27027732 - 27027933
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctc--acacaat 141  Q
    |||||||||||| ||||||| ||||||||||||||| || ||||||||||| |||| ||||||| |||         | ||| ||||||||  |||||||    
T  27027732 ttgtttcaaaattaatgtcaatttacatttccaatacaaatttaatttttttcttcaaactttatccttaataaatactccaacttttctctcacacaat 27027831  T
Q  142 tttcaatgcaactttaattttgtc----tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 237  Q
    ||||||||||||||||| ||||||    ||||| ||||||||||||| || |||  |||||||||||| |  ||||||  |||||||| ||| ||||||     
T  27027832 tttcaatgcaactttaaatttgtcttttttttttttataaagtaaggacactttattaaaagtgttatgtttaatgat--tttcattccattacttaata 27027929  T
Q  238 tgtg 241  Q
    ||||    
T  27027930 tgtg 27027933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 13485993 - 13485909
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaatttttt 103  Q
    ||||||||||||||||||||||||         ||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  13485993 gtttcaaaatgagtgtcactttagcaaaaacaatttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttt 13485909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 43687946 - 43687872
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  43687946 tctcacacaattttcaatgaaactttaaatttgtcttgttcttataaagtaaggttattttagtaaaattgttat 43687872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 45095559 - 45095723
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactttaat 159  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||  |||||||||||||||| ||| |||||||| ||            || ||||||     
T  45095559 aaaatgaatgtcactttacattttcaatacaactttaatttttt--ttccaactttaccctctccaacttttctctca------------cacctttaag 45095644  T
Q  160 tttgtctttttcttataaagtaa-gggcagtttggtaaaa-gtgttatatccaatgattatttcattcaatttcttaat 236  Q
    |||||| |||||||||||||||| ||||| ||| |||||| ||||||| |  |||||||||||||||| ||| ||||||    
T  45095645 tttgtccttttcttataaagtaaggggcattttagtaaaatgtgttatgtttaatgattatttcattccattccttaat 45095723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 52222892 - 52222831
Alignment:
Q  59 tcaaaatgaatgtcatttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||||||||    
T  52222892 tcaaaatgaatgtcgttt-catttccaatacaactttaatttttttcttccaactttaccctc 52222831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 236
Target Start/End: Original strand, 4391992 - 4392088
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||| ||||||||||||||||||||||| ||||||||||||||         ||||||||| ||||||||||||| || ||| |||||||||||  ||||    
T  4391992 tctcgcacaattttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtgttatgtctaataattatttcatttcattt 4392082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 22730924 - 22730989
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||| ||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  22730924 ttgttttaaactgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 22730989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 32304060 - 32303991
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||||  |||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  32304060 tttgttttgaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctc 32303991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 53560754 - 53560807
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  53560754 tctcacataattttcaatgcaactttaagattgtctttttcttataaagtaagg 53560807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 22731035 - 22731126
Alignment:
Q  146 aatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||| |||||||| ||||||||||||||||||| | ||| |||||| |||||| |||||| |  |||||||||||||||  ||||||||||||    
T  22731035 aatgtaactttaagtttgtctttttcttataaattgagg-cagtttagtaaaaatgttatgtttaatgattatttcattatatttcttaatct 22731126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 44645340 - 44645481
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctc----acacaatt 142  Q
    ||||||||||||||||  ||||||||||| ||  |||||||||||||| ||||||||||||||||         | ||| ||||||||    ||| ||||    
T  44645340 tttcaaaatgaatgtcgctttacatttcccatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcttacataatt 44645439  T
Q  143 ttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||| ||| |||||||| ||||||||||||    
T  44645440 ttcaatgcaactttaagtttatctttttcatataaagtaagg 44645481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 3000841 - 3000883
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttctt 173  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  3000841 tctcacacaattttcaatgcaactttaaatttgtctttttctt 3000883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 56 - 120
Target Start/End: Complemental strand, 35099518 - 35099453
Alignment:
Q  56 gtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccct 120  Q
    |||||| ||| |||||||||| |||||||||||| |||||||||||||| || |||||||||||||    
T  35099518 gtttcataataaatgtcattttacatttccaatacaactttaatttttttctcccaactttaccct 35099453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 36310404 - 36310339
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||| |||||||||| |||||||||||| ||||||| |||||| || |||||||||||    
T  36310404 ttgtttcaaaataaatgtcattttacatttccaatacaactttattttttttctcccaactttacc 36310339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 234
Target Start/End: Complemental strand, 43600257 - 43600152
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtc-tttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaat 228  Q
    ||||||||||||| ||||  |||||||| |||||| ||||| ||||||||| ||||| ||||| |||||| ||||||||| ||| ||||||| |||  ||    
T  43600257 tctcacacaatttccaatataactttaaatttgtcattttttttataaagtaaagggaagtttagtaaaaatgttatatctaataattattttatttcat 43600158  T
Q  229 ttctta 234  Q
    ||||||    
T  43600157 ttctta 43600152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 54261414 - 54261482
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||||||| |||  ||||||||| ||||  |||||||||||||| |||||||||||||||||    
T  54261414 ttgtttcaaaatgaacgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctc 54261482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 184
Target Start/End: Complemental strand, 42007119 - 42007072
Alignment:
Q  137 acaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||||||||| |||||||| |||||||||| |||||    
T  42007119 acaattttcaatgcaactttaagtttgtcttgttcttataaaataagg 42007072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 16240664 - 16240706
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttctt 173  Q
    |||| ||||||||||||||||||||||| ||||||||||||||    
T  16240664 tctcgcacaattttcaatgcaactttaagtttgtctttttctt 16240706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 36541455 - 36541558
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgttt-caaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttac 117  Q
    ||||||||||||||||| |||||||        ||||||| ||||||||||||| ||| |||||| ||||| ||||||| ||| || |||||||||||||    
T  36541455 gtttcaaaatgagtgtcgctttagttaaagaaatttgttttcaaaatgaatgtcgttttacattttcaatacaactttactttatttcttccaactttac 36541554  T
Q  118 cctc 121  Q
    ||||    
T  36541555 cctc 36541558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 32303964 - 32303915
Alignment:
Q  135 acacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||| || |||||| |||| ||||||||||||||||||||    
T  32303964 acacaattttcaatacagctttaagtttgcctttttcttataaagtaagg 32303915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 36541581 - 36541634
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||| |||||||||||| |||||||| ||| ||||||| ||||    
T  36541581 tctcacacaattttcgatgcaactttaagtttgtcttgttcctataaagcaagg 36541634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 43688040 - 43687969
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaatt---ttttccttccaactttaccctc 121  Q
    ||||| |||||| ||||||| ||||||||||||||| ||||||||||   |||| |||||||||||||||||    
T  43688040 ttgttccaaaataaatgtcactttacatttccaatacaactttaattttttttttcttccaactttaccctc 43687969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 51381720 - 51381789
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaa-ttttttccttccaactttaccctc 121  Q
    |||||||||||| ||||||| ||||||||| ||||| |||||||| |||||| |||| ||||||||||||    
T  51381720 ttgtttcaaaataaatgtcactttacatttacaatacaactttaattttttttcttctaactttaccctc 51381789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 224
Target Start/End: Complemental strand, 43599571 - 43599520
Alignment:
Q  173 tataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |||||| |||||||||||| |||||||| |||| || |||||||||||||||    
T  43599571 tataaaataagggcagtttagtaaaagtattatgtctaatgattatttcatt 43599520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 49470788 - 49470851
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaacttta 116  Q
    ||||||||||||||||||| ||| |||||| ||||| |||||||||||||| | ||||| ||||    
T  49470788 ttgtttcaaaatgaatgtcgttttacattttcaatacaactttaatttttttcatccaaattta 49470851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 20512651 - 20512585
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaa-ttttttccttccaactttacc 118  Q
    |||||||||||||||||||  ||||||||| ||||  |||||||| |||||| ||||||||||||||    
T  20512651 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaaatttttttcttccaactttacc 20512585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 52202445 - 52202383
Alignment:
Q  54 ttgtttcaaaatgaatgtcattta-catttccaatataactttaattttttccttccaacttt 115  Q
    |||||| |||||||||||| |||  ||||| ||||| |||||||||||||| |||||||||||    
T  52202445 ttgttttaaaatgaatgtcgttttgcattttcaatacaactttaatttttttcttccaacttt 52202383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 5244584 - 5244652
Alignment:
Q  53 tttgtttcaaaatgaatgtcat-ttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||| |||||||||||||  ||||||||  |||||||||||||||||||   |||||||||||||||    
T  5244584 tttgttttaaaatgaatgtcaccttacatttttaatataactttaatttttt-tatccaactttaccctc 5244652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 35099426 - 35099389
Alignment:
Q  136 cacaattttcaatgcaactttaattttgtctttttctt 173  Q
    ||||||||||||||||| ||||| ||||||||||||||    
T  35099426 cacaattttcaatgcaattttaagtttgtctttttctt 35099389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 43600341 - 43600277
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||| ||||| | ||||||||| ||||| || |||||||||||| ||||||||||||||||    
T  43600341 tttcaaaataaatgttactttacattttcaatacaattttaattttttc-ttccaactttaccctc 43600277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 41287082 - 41287145
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaa--ttttttccttccaactttaccctc 121  Q
    |||||| |||||| ||||||||||||||| ||||||||  |||||| ||||||||||| |||||    
T  41287082 aaaatggatgtcactttacatttccaatacaactttaatttttttttcttccaacttttccctc 41287145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 42857102 - 42857046
Alignment:
Q  185 gcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||| |||||| |||||| || |||||||||||||||  ||| |||||||||||    
T  42857102 gcagtttagtaaaaatgttatgtctaatgattatttcatttgattccttaatctgtg 42857046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 42857212 - 42857148
Alignment:
Q  55 tgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    ||||| |||| |||||||| ||||||||||| ||| ||| |||||||||| |||| |||||||||    
T  42857212 tgttttaaaaggaatgtcactttacatttcccatacaacattaatttttttcttctaactttacc 42857148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 117
Target Start/End: Original strand, 50420258 - 50420321
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttac 117  Q
    |||||| ||||| |||||||||| ||||||  |||| |||||||||||||| |||||||||||||    
T  50420258 ttgtttaaaaataaatgtcattttacatttttaatacaactttaatttttt-cttccaactttac 50420321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 53560663 - 53560726
Alignment:
Q  53 tttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaacttta 116  Q
    ||||||||||||| |||||| ||| |||||| ||||  |||||||||||||| ||||||||||||    
T  53560663 tttgtttcaaaataaatgtcgttttacatttacaatgcaactttaatttttt-cttccaacttta 53560726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 135; Significance: 2e-70; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 238
Target Start/End: Original strand, 52732560 - 52732782
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttac 117  Q
    |||||||||||||||||||||||||         |||||| ||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||    
T  52732560 gtttcaaaatgagtgtcactttagttaaaaaaaattgttttaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttac 52732659  T
Q  118 cctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgat 215  Q
    |||||||| ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  52732660 cctccccaacttttctctcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtgttatatccaatgat 52732759  T
Q  216 tatttcattcaatttcttaatct 238  Q
    |||||||||| |||| |||||||    
T  52732760 tatttcattccattttttaatct 52732782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 43421273 - 43421082
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatg 149  Q
    |||||||||||||||| |||| ||||||||||| ||| |||||||||||||| ||||||||||||||||| |||  |||||||  ||||||| |||||||    
T  43421273 tttgtttcaaaatgaaggtcactttacatttcccatacaactttaatttttttcttccaactttaccctctccaggttttctctcacacaatattcaatg 43421174  T
Q  150 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||||||||||||||||||||||||||| ||| ||| |||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  43421173 caactttaattttgtctttttcttataaagtaagagcaatttagtaaaagtattatatccaatgattatttcattccatttcttaatttgtg 43421082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 239
Target Start/End: Original strand, 34360033 - 34360197
Alignment:
Q  77 acatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttctta 174  Q
    |||||| ||||| ||||||| |||||| ||||||||||||||||| ||| ||||||||  |||||||||||||||||||||||| |||||||||||||||    
T  34360033 acattttcaatacaactttattttttttcttccaactttaccctctccaacttttctctcacacaattttcaatgcaactttaagtttgtctttttctta 34360132  T
Q  175 taaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 239  Q
    ||||||||||||||||| |||||||||||||||| |||||||||||||||  ||| |||||||||    
T  34360133 taaagtaagggcagtttagtaaaagtgttatatctaatgattatttcatttcattccttaatctg 34360197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 20 - 236
Target Start/End: Original strand, 51930561 - 51930765
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||||        ||||||||||||||||||||  ||||||||||||||| || ||||||||||| ||||||||||| |     
T  51930561 gtttcaaaatgagtgtcactttagttaaaaaaatttgtttcaaaatgaatgtcgctttacatttccaatacaattttaatttttttcttccaacttttc- 51930659  T
Q  119 ctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattat 218  Q
                ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| |||||    
T  51930660 ------------tctcacacaattttcaatgcaactttaattttgtcattttcttataaagtaagggcagtttagtaaaagcgttatatccaattattat 51930747  T
Q  219 ttcattcaatttcttaat 236  Q
    ||||||| ||||| ||||    
T  51930748 ttcattccatttcataat 51930765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 15501302 - 15501129
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgc 150  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||||||| |||||||| |||| |||  || ||||||||  |||||||||| |||||    
T  15501302 ttgtttgaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacattactctcttcaacttttctctcacacaatttttaatgc 15501203  T
Q  151 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |||||||| ||||| |||||||||||||||||||||||||| |||||| |||||| || |||||||||||||||    
T  15501202 aactttaagtttgtatttttcttataaagtaagggcagtttagtaaaaatgttatgtctaatgattatttcatt 15501129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 61 - 241
Target Start/End: Original strand, 54512034 - 54512217
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaacttta 157  Q
    ||||||||| ||| |||||||||  ||||||||||||||||||  |||||||||||| |||| ||| ||||||||  ||||||| |||||||||||||||    
T  54512034 aaaatgaatatcactttacatttttaatataactttaatttttatcttccaactttatcctctccaacttttctctcacacaatgttcaatgcaacttta 54512133  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||| ||||||||||||||||| ||||||| ||||||  |||||||||||| |||||||||||  |||||||||| ||||    
T  54512134 attttgtcattttcttataaagtaagagcagtttagtaaaaacgttatatccaattattatttcatttcatttcttaatatgtg 54512217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 21045150 - 21045327
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctccccatcttttctcacacaattttcaatgc 150  Q
    ||||||||||||||||||||| ||||||||| ||||| ||||||||||||||  ||||||||||| |             ||||||||||||||||||||    
T  21045150 tttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaatgc 21045236  T
Q  151 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||| ||| |||||||||||    
T  21045237 aactttaattttgtctttttcttataaagtaagggcagtttaataaaagccttatatccaatgattatttcattccattccttaatctgtg 21045327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 44855328 - 44855438
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||| ||||    
T  44855328 tctcacacaattttcaatgcaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagcgttatattcaatgattatttcattctattt 44855427  T
Q  231 cttaatctgtg 241  Q
    |||||| ||||    
T  44855428 cttaatttgtg 44855438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 32141119 - 32140944
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    ||||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||||||| |             ||||||||||||||||||||||    
T  32141119 ttgtttcaaaatgaatgccactttacatttccaatacaactttaatttttttcttccaacttttc-------------tctcacacaattttcaatgcaa 32141033  T
Q  153 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
     ||||  ||||||||||  |||||||||| ||||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||    
T  32141032 atttatgtttgtcttttgtttataaagtaggggcagtttagtaaaagtgttatgtctaatgattatttcattcaatttcttaatctgtg 32140944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 50072242 - 50072438
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||| |        |||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||       
T  50072242 gtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaacttt--- 50072338  T
Q  119 ctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattat 218  Q
              |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||| ||||||  ||||||||||||||||||    
T  50072339 ----------tttctcacacaattttcaatgcaactttaattttgtctt------ataaagtaagggcagtttagtaaaaacgttatatccaatgattat 50072422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 36805600 - 36805408
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctccc--catctttt--ctcacacaattttcaat 148  Q
    |||||| |||||| |||| |||| |||||| ||||| |||||||||||||| |||||||||||| |||| |  || |||||  |||||||||||||||||    
T  36805600 ttgttttaaaatgtatgttattttacatttgcaatacaactttaatttttttcttccaactttaacctcactccaacttttttctcacacaattttcaat 36805501  T
Q  149 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
     ||||||||| |||||||||||| |||||| ||||| |||||| ||||||||||||| || |||||||||||||||  ||| |||||||||||    
T  36805500 acaactttaagtttgtctttttcatataaactaaggacagtttagtaaaagtgttatgtctaatgattatttcatttcattccttaatctgtg 36805408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 31817365 - 31817157
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    ||||||||||||||||||| |||| |       ||||||||||||||||||||| ||||||||||||||  ||||||  |||||| ||||||||||| |     
T  31817365 gtttcaaaatgagtgtcacattagccaaaaaaatttgtttcaaaatgaatgtcactttacatttccaatgcaacttt--tttttttcttccaacttttc- 31817269  T
Q  119 ctccccatcttttctcacacaattttcaatgcaactttaattttgtcttttt-cttataaagtaagggcagtttggtaaaagtgttatatccaatgatta 217  Q
                |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| ||||||  |||||||||||||||||    
T  31817268 ------------tctcacacaattttcaatgcaactttaattttgtattttttcttataaagtaagggaagtttagtaaaaacgttatatccaatgatta 31817181  T
Q  218 tttcattcaatttcttaatctgtg 241  Q
    |||||||| |||||||||| ||||    
T  31817180 tttcattccatttcttaatttgtg 31817157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 54 - 236
Target Start/End: Original strand, 19849079 - 19849273
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaat 141  Q
    |||||| ||||||||| ||| |||||| |||||||| |||||||||||||| |||||||||||||||||          ||| ||||||||  |||||||    
T  19849079 ttgttttaaaatgaatttcactttacaattccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcacacaat 19849178  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 236  Q
    ||||||||||||||||| ||||| ||||||||||||||| |||||||||| |||||| ||||||||  ||| ||||||| |||  ||||||||||    
T  19849179 tttcaatgcaactttaagtttgtttttttcttataaagtgagggcagtttagtaaaaatgttatatgtaataattattttatttcatttcttaat 19849273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 54 - 224
Target Start/End: Original strand, 37445655 - 37445837
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttct--cacacaat 141  Q
    |||||| |||||||||||||||| ||||||  |||| |||||||||||||| |||||||||||||||||          | |  ||||||  |||| |||    
T  37445655 ttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttcttccaactttaccctcaataaatattcaaatttttctttcacataat 37445754  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  37445755 ttttaatgcaactttaaatttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcatt 37445837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 56423056 - 56422957
Alignment:
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||| |||||||| |||||||||||||||||||| | |||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  56423056 tttcaatgcaattttaatttcgtctttttcttataaagtaaagacagtttagtaaaagcgttatatccaatgattatttcattcgatttcttaatctgtg 56422957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 237
Target Start/End: Complemental strand, 39671238 - 39671068
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||||||||||| ||| |||||| |             ||||||||||||||||||||||    
T  39671238 ttgtttcaaaatgaatgtcgttttacatttccaatacaactttaattttttctttc-aacttttc-------------tctcacacaattttcaatgcaa 39671153  T
Q  153 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 237  Q
    |||||| ||||| ||||||||||||||||| || ||||| ||||| ||||||| || |||||| ||||||||| |||||||||||    
T  39671152 ctttaagtttgtttttttcttataaagtaaaggtagtttagtaaatgtgttatgtctaatgataatttcattccatttcttaatc 39671068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 34096100 - 34096210
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||  || |||||||||||||||  ||||    
T  34096100 tctcacacaattttcaatgaaactttaagtttgtctttttcttataaagtaagggcaatttagtaaaagtgttaagtctaatgattatttcatttcattt 34096199  T
Q  231 cttaatctgtg 241  Q
     ||||| ||||    
T  34096200 tttaatttgtg 34096210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 22212336 - 22212535
Alignment:
Q  54 ttgtttcaaaatgaatgtcat-ttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatc--ttttctcacacaat 141  Q
    |||||| |||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||          ||| |  ||||||||||||||    
T  22212336 ttgttttaaaatgaatgtcaccttacatttccaatataactttaatttttttcttccaactttaccctcaataaatactccaacatttttctcacacaat 22212435  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||| ||||||||| ||||  |||||  ||||||  || |||||||| ||||||||||||| || |||||||||||||||  ||| |||||| ||||    
T  22212436 tttcaatacaactttaagtttgagttttttatataaaacaaaggcagttttgtaaaagtgttatgtctaatgattatttcatttcattccttaatatgtg 22212535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 45520526 - 45520419
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||| |||||||| ||||||||||||| |||||||| ||||||||| |||||||||| || ||||||||||||| || ||||||||||| |||| ||||    
T  45520526 tctcatacaatttttaatgcaactttaagtttgtcttattcttataatgtaagggcagcttagtaaaagtgttatgtctaatgattattttattccattt 45520427  T
Q  231 cttaatct 238  Q
    ||||||||    
T  45520426 cttaatct 45520419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 24259606 - 24259771
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 139  Q
    |||||||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||||||         | ||| ||||    |||||||||    
T  24259606 ttgtttcaaaatgaatgtcactttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 24259705  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||  | ||| |||||| ||||||    
T  24259706 attttcaatgcaactttaagtttgtcattttcttataaagtaaggttattttagtaaaattgttat 24259771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 238
Target Start/End: Original strand, 30022062 - 30022258
Alignment:
Q  53 tttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctccc---------catcttttctc--acacaa 140  Q
    ||||||||||||||||||| | || |||||||||||| |||||||||||||| |||||||||||||||||           || ||||||||  ||||||    
T  30022062 tttgtttcaaaatgaatgttacttgacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctcacacaa 30022161  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||||||||||||| | ||||||||||||||||| |  || || ||||| |||||||||||||||  ||||||||||| |||  ||| ||||||||    
T  30022162 ttttcaatgcaactttgagtttgtctttttcttatacaagaa-ggtagtttagtaaaagtgttatatataatgattattttatttcattccttaatct 30022258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 241
Target Start/End: Original strand, 42672477 - 42672583
Alignment:
Q  135 acacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttctta 234  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| | | ||||| ||||||||||||| || |||||||||||||||  ||| ||||    
T  42672477 acacaattttcaatacaactttaaatttgtctttttcttataaagtatgagtagtttagtaaaagtgttatgtctaatgattatttcattatattcctta 42672576  T
Q  235 atctgtg 241  Q
    || ||||    
T  42672577 atttgtg 42672583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 208
Target Start/End: Original strand, 35928449 - 35928650
Alignment:
Q  17 tctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaacttt 115  Q
    ||||||||| |||||||||||||||| ||        |||||||||||| ||| ||| ||||||||| ||||| |||||||||||||| |||||||||||    
T  35928449 tctgtttcacaatgagtgtcactttaatcaaaaaaaattgtttcaaaataaatatcactttacattttcaatacaactttaatttttttcttccaacttt 35928548  T
Q  116 accct---------ccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttata 206  Q
    |||||         |  || | |||||  ||||||||||||||||| ||||| ||| ||||||||||||||||| | |||| ||| ||||||||| ||||    
T  35928549 accctcaataaatactgcaacgtttctttcacaattttcaatgcaattttaagtttatctttttcttataaagtcatggcaatttagtaaaagtgatata 35928648  T
Q  207 tc 208  Q
    ||    
T  35928649 tc 35928650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 56556410 - 56556237
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctccccatcttttctcacacaattttcaatgca 151  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||  ||||||||||| |             ||||||||||||||||||| |    
T  56556410 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaatgta 56556324  T
Q  152 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |  |||| ||||| |||||||||||||| ||||  | ||| ||||||||||||| || ||||   ||||||||||||| |||||||||||    
T  56556323 atgttaagtttgtatttttcttataaagcaaggataatttagtaaaagtgttatgtctaatg---atttcattcaattccttaatctgtg 56556237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 45889559 - 45889702
Alignment:
Q  54 ttgtttcaaaatgaatgtcatttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc----acacaa 140  Q
    |||||||||||||||||||  |||||||| ||||| |||||||| ||||| ||||| |||||||||||          ||| ||||||||    ||||||    
T  45889559 ttgtttcaaaatgaatgtcgcttacattttcaatacaactttaacttttttcttcctactttaccctcaataaatactccaacttttctctctcacacaa 45889658  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||||| ||||| |||||||||||||||||||    
T  45889659 ttttcaatgcaactttaagtttgtttttttcttataaagtaagg 45889702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 122
Target Start/End: Original strand, 6462004 - 6462073
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc 122  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  6462004 ttgtttcaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctcc 6462073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 54233902 - 54233954
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 183  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54233902 tctcacacaattttcaatgcaactttaagtttgtctttttcttataaagtaag 54233954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 238
Target Start/End: Original strand, 3093433 - 3093539
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||||||||| | |||||||||||| ||| | |||||||||||||| |||| || |||  | |||||||||| || ||||||||||| |||||||||    
T  3093433 tctcacacaatttccgatgcaactttaaatttct-tttttcttataaaggaaggacaatttaatgaaagtgttatgtctaatgattattttattcaattt 3093531  T
Q  231 cttaatct 238  Q
    ||||||||    
T  3093532 cttaatct 3093539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 11835105 - 11835295
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctcacacaattttca 146  Q
    ||||||||||||||||| |||||||||  ||||||||||||||||||| ||| ||| |||||| ||          | | ||| ||||||||||||||||    
T  11835105 tttcaaaatgaatgtcactttacatttttaatataactttaatttttttctttcaaatttaccttcaataaatactcaaccttctctcacacaattttca 11835204  T
Q  147 atgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||||||||| ||| || |||||||||||| ||  || |||||  ||||||||||||  | ||| |||||||||||  ||||||||||||    
T  11835205 atgcaactttaagtttatc-ttttcttataaactataggtagtttaataaaagtgttatgcctaataattatttcatttcatttcttaatct 11835295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 31941553 - 31941697
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatct----tttctcacaca 139  Q
    |||||| ||||||||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||         | ||| ||    | ||||||| |    
T  31941553 ttgttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaactattctctctcacata 31941652  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||    
T  31941653 attttcaatgcaactttaagtttgtcttgttcttataaagtaagg 31941697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 34124381 - 34124491
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||  |   ||| || || |||||||||    
T  34124381 tctcacacaattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaattt 34124480  T
Q  231 cttaatctgtg 241  Q
    |||||||||||    
T  34124481 cttaatctgtg 34124491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 47321138 - 47321341
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctcc---------ccatcttttctcac----a 137  Q
    ||||||| ||||||||||||| ||||||||| ||||| ||||||||||||||  |||||||||||||||||          | | ||||||||||    |    
T  47321138 tttgttttaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaactttaccctcaataaatactctaacttttctcactcgca 47321237  T
Q  138 caattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 237  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||  | ||| |||||| || |||  |   ||| ||||| |||||||| |||||||    
T  47321238 caattttcaatgcaactttaaggttgtctttttcttataaagtaaggttattttagtaaaattgctatgacatttgactattttattcaattccttaatc 47321337  T
Q  238 tgtg 241  Q
    ||||    
T  47321338 tgtg 47321341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 182
Target Start/End: Complemental strand, 17499874 - 17499732
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctcac----aca 139  Q
    |||||||||||||||||||  ||||||||||||||  || ||||||||||| |||||||||||||||||          | | |||||||| |    |||    
T  17499874 ttgtttcaaaatgaatgtcgctttacatttccaatgcaattttaatttttttcttccaactttaccctcaataaatactcaaacttttctctctcataca 17499775  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaa 182  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  17499774 attttcaatgcaactttaagtttgtctttttcttataaagtaa 17499732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 57 - 184
Target Start/End: Original strand, 28116243 - 28116384
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctc----acacaatt 142  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||         | | | ||||||||    ||||||||    
T  28116243 tttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttacccttaataaatactcaaacttttctctcacacacaatt 28116342  T
Q  143 ttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||| || |||||||| |||||||| ||||||||||||||||    
T  28116343 ttcagtgtaactttaagtttgtcttattcttataaagtaagg 28116384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 238
Target Start/End: Complemental strand, 45903441 - 45903377
Alignment:
Q  174 ataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||||||| |||||||  |||||| ||||||||||||||||||||||||| ||||||||||||    
T  45903441 ataaagtaagagcagtttaataaaagcgttatatccaatgattatttcattctatttcttaatct 45903377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 4408243 - 4408169
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||| |||||||  | ||| |||||| ||||||    
T  4408243 tctcacacaattttcaatgcaattttaagtttgtctttttcttatatagtaaggttattttagtaaaattgttat 4408169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 19282567 - 19282501
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaatt-ttttccttccaactttacc 118  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||||    
T  19282567 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttacc 19282501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 29840036 - 29840139
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaa-ttttttccttccaactttac 117  Q
    |||||||||||| ||||||||||| |        |||||||||||||||||||| ||||||||||||||| |||||||| |||||| || ||||||||||    
T  29840036 gtttcaaaatgactgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttctcccaactttac 29840135  T
Q  118 cctc 121  Q
    ||||    
T  29840136 cctc 29840139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 237
Target Start/End: Complemental strand, 38761898 - 38761788
Alignment:
Q  127 cttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattca 226  Q
    |||||||| |||||||||||| | |||||||| | ||||||| ||| ||||||||||||   ||| ||||||||||||| || | | ||||||| ||||     
T  38761898 cttttctctcacaattttcaaggtaactttaagtgtgtctttctctaataaagtaagggtgatttagtaaaagtgttatgtctattaattatttaattct 38761799  T
Q  227 atttcttaatc 237  Q
    |||||||||||    
T  38761798 atttcttaatc 38761788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 235
Target Start/End: Complemental strand, 29289959 - 29289852
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtct---ttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaa 227  Q
    |||||||||||||||||||||| ||||| |||||||   |||| ||||||||||| |||  |||  ||||| | |||| || |||||||||||||||| |    
T  29289959 tctcacacaattttcaatgcaattttaagtttgtctttttttttttataaagtaaaggcgatttattaaaaatattatgtctaatgattatttcattcca 29289860  T
Q  228 tttcttaa 235  Q
    ||||||||    
T  29289859 tttcttaa 29289852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 173
Target Start/End: Original strand, 31987306 - 31987430
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctcacaca--attttcaat 148  Q
    ||||||||||||| |||||||||| |||| |||||||||||||| |||||||||||||||||          ||| |||||||| | ||  |||||||||    
T  31987306 aaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctcgcataattttcaat 31987405  T
Q  149 gcaactttaattttgtctttttctt 173  Q
    |||||||||| ||||||||||||||    
T  31987406 gcaactttaaatttgtctttttctt 31987430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 51434323 - 51434270
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||||||||| || || ||||||||||||||||||||||    
T  51434323 tctcacacaattttcaatgcaacttaaagttagtctttttcttataaagtaagg 51434270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 173
Target Start/End: Original strand, 38692474 - 38692516
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttctt 173  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  38692474 tctcgcacaattttcaatgcaactttaattttgtctttttctt 38692516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 152 - 241
Target Start/End: Complemental strand, 51737367 - 51737280
Alignment:
Q  152 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||| ||||||||||||  |||||||||||| | ||| ||||||||||||| || ||| |||||||||||| ||| |||||| ||||    
T  51737367 actttaagtttgtctttttc--ataaagtaagggtaatttagtaaaagtgttatgtctaattattatttcattctattccttaatttgtg 51737280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 34124289 - 34124358
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||| ||||||||||||  ||||||||| ||||  |||||||||||||| |||||||||||||||||    
T  34124289 tttgttttaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctc 34124358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 241
Target Start/End: Original strand, 30492732 - 30492914
Alignment:
Q  63 aatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctc--acacaa-ttttcaatg 149  Q
    ||||||||||| ||||||||| ||||| |||||||||||||| || |||||||||||||         | ||| ||||||||   ||||| |||| ||||    
T  30492732 aatgaatgtcactttacattttcaatacaactttaatttttttctcccaactttaccctcaataaatactccaacttttctcttgcacaattttttaatg 30492831  T
Q  150 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||| ||||||||||||||         ||||||||  ||||||||||||| || |||||||||||||||| ||| |||||| ||||    
T  30492832 caactttaagtttgtctttttctt---------gggcagttcagtaaaagtgttatgtctaatgattatttcattccattccttaatttgtg 30492914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 51434414 - 51434346
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||| ||||||||||||  |||||||||| |||  ||||||||||||||||||| ||||||||||||    
T  51434414 ttgttttaaaatgaatgtcgctttacatttctaatgcaactttaattttttccttcaaactttaccctc 51434346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 6462102 - 6462153
Alignment:
Q  133 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||| |||||||||||||||| ||||| || ||||||||||||||||    
T  6462102 tcacacaatattcaatgcaactttaagtttgttttgttcttataaagtaagg 6462153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 6510078 - 6510253
Alignment:
Q  19 tgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttac 117  Q
    ||||| ||||||| |||||||||||||       ||||||||||||| ||||||| |||| |||| ||||| |||||||| ||||| ||  |||||||||    
T  6510078 tgttttaaaatgaatgtcactttagtcaaaataatttgtttcaaaataaatgtcactttatattttcaatacaactttaacttttttctctcaactttac 6510177  T
Q  118 cct---------ccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaa 182  Q
    |||         | ||| ||||||||  |||||||||| |||| || ||||| ||||||||||| |||||||||||    
T  6510178 cctcaataaatactccaccttttctcttacacaatttttaatgtaattttaagtttgtctttttattataaagtaa 6510253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 17317910 - 17317805
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||||||||||||||||||     || |||||| ||||||||||||||||| | ||||| ||||||| |  || || ||||||||||| |||  ||||    
T  17317910 tctcacacaattttcaatgca-----aaatttgtccttttcttataaagtaagcgtagtttagtaaaagagcaatgtctaatgattattttattttattt 17317816  T
Q  231 cttaatctgtg 241  Q
     ||||||||||    
T  17317815 tttaatctgtg 17317805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 178
Target Start/End: Complemental strand, 34534157 - 34534111
Alignment:
Q  133 tcacacaattttcaatgcaac-tttaattttgtctttttcttataaa 178  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||    
T  34534157 tcacacaattttcaatgcaacttttaagtttgtctttttcttataaa 34534111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 45903559 - 45903501
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactt 114  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||| || |||||||    
T  45903559 tttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctaccaactt 45903501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 135 - 184
Target Start/End: Original strand, 55126587 - 55126636
Alignment:
Q  135 acacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||  ||||||||||| |||||||| ||||||||||||||||    
T  55126587 acacaattttccttgcaactttaagtttgtcttattcttataaagtaagg 55126636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 120
Target Start/End: Complemental strand, 45520607 - 45520548
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct 120  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||| |||    
T  45520607 aaaatgaatgtcactttacattttcaatacaactttaatttttt-cttccaactttatcct 45520548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 103
Target Start/End: Complemental strand, 6232192 - 6232141
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaatttttt 103  Q
    ||||||||||||| ||||||| ||||||||| ||||| ||||||||||||||    
T  6232192 tttgtttcaaaataaatgtcaatttacattttcaatacaactttaatttttt 6232141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 38692408 - 38692471
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaacttt 115  Q
    ||||||| ||||||||||||| ||||||||| ||||  |||||||||||||| || ||||||||    
T  38692408 tttgttttaaaatgaatgtcactttacattttcaattaaactttaatttttttctcccaacttt 38692471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 55 - 103
Target Start/End: Complemental strand, 17317999 - 17317950
Alignment:
Q  55 tgtttcaaaatgaatgtcat-ttacatttccaatataactttaatttttt 103  Q
    ||||||||| |||||||||  |||||||||||||| ||||||||||||||    
T  17317999 tgtttcaaactgaatgtcacattacatttccaatacaactttaatttttt 17317950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 241
Target Start/End: Original strand, 29840201 - 29840249
Alignment:
Q  193 gtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||||| || |||||||||||||||| ||| |||||| ||||    
T  29840201 gtaaaagtgttatgtctaatgattatttcattccattccttaatttgtg 29840249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 121
Target Start/End: Original strand, 44835350 - 44835398
Alignment:
Q  74 tttacatttccaatataactttaattttttccttcc-aactttaccctc 121  Q
    |||||||||| |||| |||||||||||||| ||||| ||||||||||||    
T  44835350 tttacatttcgaatacaactttaatttttttcttccaaactttaccctc 44835398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 54091953 - 54092021
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||| ||||||||||||| |||| ||||  |||| |||||||||||||| ||  |||||||||||||    
T  54091953 ttgttttaaaatgaatgtcaatttagatttttaatacaactttaatttttttctctcaactttaccctc 54092021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 55548286 - 55548234
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 183  Q
    |||| |||||||| |||||||||||||| ||||||||| ||  ||||||||||    
T  55548286 tctctcacaatttccaatgcaactttaagtttgtctttgtcaaataaagtaag 55548234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 1e-59; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 76 - 241
Target Start/End: Original strand, 40410473 - 40410640
Alignment:
Q  76 tacatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttctt 173  Q
    ||||||||||||| |||||||||||||| || |||||||||||||| ||| ||||||||  |||||||||||||||||||||||||||||||||||||||    
T  40410473 tacatttccaatacaactttaatttttttctcccaactttaccctctccaacttttctctgacacaattttcaatgcaactttaattttgtctttttctt 40410572  T
Q  174 ataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||||||||||  |||||| |||||||||||||||||| |||||| |||||||||||||||    
T  40410573 ataaagtaagggcagtttaataaaagcgttatatccaatgattatgtcattccatttcttaatctgtg 40410640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 15 - 239
Target Start/End: Complemental strand, 29795383 - 29795156
Alignment:
Q  15 catctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaact 113  Q
    |||| |||| ||||||| ||||||||||| |       ||||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||    
T  29795383 catccgttttaaaatgaatgtcactttagccaaaaatatttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaact 29795284  T
Q  114 ttaccctccccatcttttct--cacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaa 211  Q
    |||||||| ||| |||||||  |||||||||||||||||||||||||  |||||||||||||||||| |||||||||||| |||||||| |||| || ||    
T  29795283 ttaccctctccaacttttctttcacacaattttcaatgcaactttaaagttgtctttttcttataaaataagggcagtttagtaaaagtattatgtctaa 29795184  T
Q  212 tgattatttcattcaatttcttaatctg 239  Q
    |||||||||||||| |||  ||||||||    
T  29795183 tgattatttcattccattcattaatctg 29795156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 61 - 241
Target Start/End: Complemental strand, 40987418 - 40987237
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactttaat 159  Q
    ||||||||||||  ||||||||| ||||| |||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||     
T  40987418 aaaatgaatgtcgctttacattttcaatacaactttaatttttttcttccaactttaccctctccaacttttctctcacaattttcaatgcaactttaaa 40987319  T
Q  160 tttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||| ||||||||||||||||||||| || ||| ||||||||||||| || |||||||||||||||  ||| |||||| ||||    
T  40987318 tttatctttttcttataaagtaaggacaatttagtaaaagtgttatgtctaatgattatttcatttcattccttaatatgtg 40987237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 54 - 221
Target Start/End: Original strand, 1381748 - 1381916
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    |||||| ||||||||||| | |||||||||||||||||||||| ||||||| |||||||||||||| || ||| |||||||| |||||||||||||||||    
T  1381748 ttgttttaaaatgaatgttactttacatttccaatataactttgatttttttcttccaactttaccttctccaacttttctctcacaattttcaatgcaa 1381847  T
Q  153 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttc 221  Q
     ||||| ||| |||||||||||||||||||| ||||||| ||||||||||||| || ||||||||||||    
T  1381848 ttttaagtttttctttttcttataaagtaagagcagtttagtaaaagtgttatgtctaatgattatttc 1381916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 4840881 - 4840682
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaat 141  Q
    ||||| |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||          | | ||||||||  ||||| |    
T  4840881 ttgttccaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactcaaacttttctcccacacagt 4840782  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||| ||||    
T  4840781 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatgattatttcattccatttcttaatatgtg 4840682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 56 - 241
Target Start/End: Original strand, 7743401 - 7743598
Alignment:
Q  56 gtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaattt 143  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||||||||          ||| ||||||||  |||||||||    
T  7743401 gttttaaaatgaatgtcactttacatttccaatacaactttaatctttttcttccaactttaccctcaataaatagtccaacttttctctcacacaattt 7743500  T
Q  144 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||||||| ||||||||||||||||||||||||||||  || ||||||||||||||||  |||||||||||||| ||||  ||||||||||    
T  7743501 tcaatgcaactttaaatttgtctttttcttataaagtaagggcaacttagtaaaagtgttatatctgatgattatttcatttaattctttaatctgtg 7743598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 4766380 - 4766184
Alignment:
Q  15 catctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaact 113  Q
    |||| |||||||||||||||||||||||| |       | ||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||    
T  4766380 catccgtttcaaaatgagtgtcactttag-caaaaaaatctgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttttcttccaact 4766282  T
Q  114 ttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatg 213  Q
    || |             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| |  |||||||||||||    
T  4766281 tttc-------------tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaaaggcagtttagtaataacgttatatccaatg 4766195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 1298845 - 1298738
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||  ||||||| ||||||||||||||||  ||||    
T  1298845 tctcacataattttcaatgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatattcaatgattatttcattttattt 1298746  T
Q  231 cttaatct 238  Q
    ||||||||    
T  1298745 cttaatct 1298738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 59 - 224
Target Start/End: Complemental strand, 36360522 - 36360347
Alignment:
Q  59 tcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccat---------cttttctcacacaattttcaat 148  Q
    ||||||||||| ||| ||| ||||| ||||| |||||||||||||| ||| |||||||||||||   ||         ||||||||||||||||||||||    
T  36360522 tcaaaatgaatatcactttgcattttcaatacaactttaatttttttctttcaactttaccctcaatatatactcaaacttttctcacacaattttcaat 36360423  T
Q  149 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
     ||||||||| ||| ||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||||    
T  36360422 acaactttaagtttatctttttcttataaaataagggcagtttagtaaaagtgttatgtctaatgattatttcatt 36360347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 4536538 - 4536742
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||| |        |||||||||||||||||||| ||||||||||||||| |||||||||||||| || |||||||||||    
T  4536538 gtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttctcccaactttacc 4536637  T
Q  119 ctcccca-----tct---tttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatcca 210  Q
    |||  ||     |||   |||||||||||||||||||||||||||||| ||||||||||||||         ||||||||| ||||||||| ||| || |    
T  4536638 ctcaacaaatactctaactttctcacacaattttcaatgcaactttaaatttgtctttttctt---------gggcagtttagtaaaagtgatatgtcta 4536728  T
Q  211 atgattatttcatt 224  Q
    ||||||||||||||    
T  4536729 atgattatttcatt 4536742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 238
Target Start/End: Original strand, 34225771 - 34225944
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctccccatcttttctcacacaattttcaatgca 151  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||  ||||||||||| |             |||||||||||||||||||||    
T  34225771 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaatgca 34225857  T
Q  152 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||| | |||| || |||||||||||||||  ||| ||||||||    
T  34225858 actttaagtttgtctttttcttataaagtaagggcaatttagtaaaattattatgtctaatgattatttcatttcattccttaatct 34225944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 235
Target Start/End: Original strand, 43460860 - 43460961
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||   ||||||||||||||||||||| ||||    
T  43460860 tctcacataattttcaatacaactttaattttgtcttttccttataaagtaagggcagtttagtaaaagtg---tatccaatgattatttcattccattt 43460956  T
Q  231 cttaa 235  Q
    |||||    
T  43460957 cttaa 43460961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 139 - 225
Target Start/End: Complemental strand, 14378305 - 14378219
Alignment:
Q  139 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 225  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||    
T  14378305 aattttcaatgcaactttaaatttatctttttcttataaagtaagggcagtttagtaaaagtgttatattaaatgattatttcattc 14378219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 24775276 - 24775386
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||||||||||||||  |||||||| ||||| |||||||||||||||||| ||| ||| |||||||||||||||| |||||||||||||||||||      
T  24775276 tctcacacaattttcaatataactttaagtttgtttttttcttataaagtaagagcattttagtaaaagtgttatatctaatgattatttcattcaatac 24775375  T
Q  231 cttaatctgtg 241  Q
    |||||| ||||    
T  24775376 cttaatttgtg 24775386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 37106949 - 37107061
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtcttttt--cttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaat 228  Q
    |||||||||||||||||||||||||||| ||| |||||||  ||||||||||||||||| ||| ||||||||||| | || ||| |||||||||||| ||    
T  37106949 tctcacacaattttcaatgcaactttaagtttttcttttttgcttataaagtaagggcaatttagtaaaagtgttgtgtcaaataattatttcattccat 37107048  T
Q  229 ttcttaatctgtg 241  Q
    |||||||| ||||    
T  37107049 ttcttaatgtgtg 37107061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 16316796 - 16316863
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaa 198  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  16316796 tctcacacaattttcaatgcaactttaattttgtctttttcttatacagtaagggcaatttagtaaaa 16316863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 43388845 - 43388612
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||| ||||| |       ||||||||||||||||||||  ||||||||| ||||  |||||||||||||| ||||||||||||||    
T  43388845 gtttcaaaatgagtgtcattttagccaaaaaaatttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttacc 43388746  T
Q  119 ctc--------ccca---tcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 207  Q
    |||        | ||   | || ||||||| |||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||      
T  43388745 ctcaataaatactcaaacttttctctcacataattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatga 43388646  T
Q  208 ccaatgattatttcattcaatttcttaatctgtg 241  Q
    |   ||| || || ||||||||||||||||||||    
T  43388645 catttgactactttattcaatttcttaatctgtg 43388612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 224
Target Start/End: Original strand, 42969904 - 42970069
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatctttt--ctcacacaattttcaatgcaacttta 157  Q
    ||||| ||||||| |||||||||  ||||  ||||||||||||| |||| || |||||| |||||| |||||  ||||||||||||||||||||||||||    
T  42969904 aaaataaatgtcactttacatttttaataccactttaatttttttcttctaattttaccttccccaacttttttctcacacaattttcaatgcaacttta 42970003  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |  || || |||| ||||||| |||| |||| || ||||||||||||  || ||| |||||||||||    
T  42970004 aggttatcatttttttataaaataagagcag-ttagtaaaagtgttacgtctaataattatttcatt 42970069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 33093365 - 33093434
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  33093365 tttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctc 33093434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 18374918 - 18374850
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||    
T  18374918 ttgtttgaaaatgaatgtcactttacatttccaatataattttaatttttttcttccaactttaccctc 18374850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 14698010 - 14698187
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    |||||||||||||||||||  ||||||||| ||||  |||||||||||||| ||||||||||| | |||           |||||||||||||||| |||    
T  14698010 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaacttttctctc-----------tcacacaattttcaatacaa 14698098  T
Q  153 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||| ||||| |||||||||||||||||||  | ||| |||||| || |||  |   ||| || || ||||||||||||||||||||    
T  14698099 ctttaagtttgtatttttcttataaagtaaggttattttagtaaaattgctatgacatttgactactttattcaatttcttaatctgtg 14698187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 43344288 - 43344195
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    ||||||| |||||||||| |||||||||  || ||||||||||||||||||||||  ||||  ||||| |||||| || |||||||||||||||    
T  43344288 tctcacataattttcaatacaactttaaacttatctttttcttataaagtaagggtggtttaataaaattgttatgtctaatgattatttcatt 43344195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 205
Target Start/End: Complemental strand, 775946 - 775875
Alignment:
Q  134 cacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||||  | ||| |||||| ||||||    
T  775946 cacacaattttcaatgcaactttaagtttgtctttttcttataaattaaggttattttagtaaaattgttat 775875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 2459771 - 2459915
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 139  Q
    |||||| ||||||||||||  ||||||||||||||  |||||||||||||| ||||||||||||||||         | ||| ||||    |||||||||    
T  2459771 ttgttttaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 2459870  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||| |||||| | |||||||||| |||||    
T  2459871 attttcaatgcaactttaagtttgtcctattcttataaaataagg 2459915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 4566186 - 4566112
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||| |||||  | ||| |||||| ||||||    
T  4566186 tctcacacaattttcaatgcaactttaaatttatctttttcttataaaataaggttattttagtaaaattgttat 4566112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 140 - 242
Target Start/End: Original strand, 11171839 - 11171941
Alignment:
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 239  Q
    |||| ||||| |||||||| ||||||||||||  ||||||| |||  | ||| ||||||||||||| || | ||||||||| ||||||||||||||| ||    
T  11171839 atttccaatgtaactttaagtttgtctttttcgcataaagttaggataatttagtaaaagtgttatgtctattgattattttattcaatttcttaatttg 11171938  T
Q  240 tgc 242  Q
    |||    
T  11171939 tgc 11171941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 1360175 - 1360306
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccc---------catcttttctc--acacaat 141  Q
    |||||||||||||||||||| ||| ||||||||||| |||||||||||||| || |||| |||||||||           || ||||||||  | |||||    
T  1360175 ttgtttcaaaatgaatgtcactttgcatttccaatacaactttaatttttttctcccaattttaccctcaataaatacttcaacttttctcttaaacaat 1360274  T
Q  142 tttcaatgcaactttaattttgtctttttctt 173  Q
    ||||||||||||||||| ||||||||||||||    
T  1360275 tttcaatgcaactttaagtttgtctttttctt 1360306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 10581012 - 10580944
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||||||||||||| ||| |||| |||| ||||| |||||||||||||| |||||||||||||||||    
T  10581012 ttgtttcaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccctc 10580944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 41984416 - 41984561
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctc----acaca 139  Q
    |||||||||||| ||| ||  ||||||||| ||||| |||||||||||||| |||||||||||||| |         | ||| ||||||||    |||||    
T  41984416 ttgtttcaaaataaatatcgctttacattttcaatacaactttaatttttttcttccaactttacctttaataaatactccaacttttctctcacacaca 41984515  T
Q  140 attttcaatgcaactttaa-ttttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  41984516 attttcaatgcaactttaagttttgtcttattcttataaagtaagg 41984561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 25332659 - 25332712
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||| |||||||||||| ||||| ||| |||||||||||||||||||||||||    
T  25332659 tctcatacaattttcaatacaactctaagtttgtctttttcttataaagtaagg 25332712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 39866736 - 39866683
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||||| ||||||||| |||||| ||||||| ||||||||||    
T  39866736 tctcacacaattttcaatacaactttaagtttgtcattttcttgtaaagtaagg 39866683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 10580921 - 10580869
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 183  Q
    |||||||||||||||||| |||||||||  ||||||| |||||||||||||||    
T  10580921 tctcacacaattttcaatacaactttaagattgtcttgttcttataaagtaag 10580869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 237
Target Start/End: Original strand, 44228609 - 44228659
Alignment:
Q  187 agtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 237  Q
    ||||| |||||||||||||||| |||||||||||||||| |||| ||||||    
T  44228609 agtttagtaaaagtgttatatctaatgattatttcattccattttttaatc 44228659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 16316710 - 16316771
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttac 117  Q
    ||||||| ||||||||| |||| |||||||||| |||||||||||||| ||||||| |||||    
T  16316710 tttcaaattgaatgtcactttatatttccaatacaactttaatttttttcttccaaatttac 16316771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 776039 - 775972
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||||||||||||||||  ||||||||| ||||  |||||||||||||| |||| ||||||||||||    
T  776039 ttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttt-cttctaactttaccctc 775972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 33093458 - 33093510
Alignment:
Q  132 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||||||||||| ||| ||||  | |||||||||||||    
T  33093458 ctcacacaattttcaatgcaactttaagtttatcttgatgttataaagtaagg 33093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 61 - 115
Target Start/End: Complemental strand, 14378371 - 14378316
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaacttt 115  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||| || ||||||||    
T  14378371 aaaatgaatgtcactttacattttcaatacaactttaatttttttctcccaacttt 14378316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 104
Target Start/End: Complemental strand, 45148106 - 45148055
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc 104  Q
    |||||| ||||||||||||| ||||||||| ||||| |||||||||||||||    
T  45148106 ttgttttaaaatgaatgtcactttacattttcaataaaactttaattttttc 45148055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 1298931 - 1298885
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttt 102  Q
    ||||||||||||||||| |||||||||| |||| |||||||||||||    
T  1298931 tttcaaaatgaatgtcactttacatttctaatacaactttaattttt 1298885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 6591963 - 6592013
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaatttttt 103  Q
    |||||| ||||||||| |||||| |||||||||||| ||||||||||||||    
T  6591963 ttgttttaaaatgaatatcattttacatttccaatacaactttaatttttt 6592013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 39866820 - 39866762
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    ||||||||||||  ||||||||||||||  || ||||||||||| ||||||||||||||    
T  39866820 aaaatgaatgtcgctttacatttccaatgcaaatttaatttttttcttccaactttacc 39866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 43344375 - 43344312
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    ||||||||||||||||||||  ||| |||| ||||| |||||||||||||  ||||||||||||||    
T  43344375 ttgtttcaaaatgaatgtcaccttatattttcaatacaactttaattttt--cttccaactttacc 43344312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 14511552 - 14511589
Alignment:
Q  136 cacaattttcaatgcaactttaattttgtctttttctt 173  Q
    |||||||||||||| |||||||| ||||||||||||||    
T  14511552 cacaattttcaatgtaactttaaatttgtctttttctt 14511589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 24775186 - 24775255
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||| ||||||| ||||| ||||||||| ||||| || ||||||||||| || |||| |||||||||    
T  24775186 tttgttttaaaatgattgtcactttacattttcaatacaattttaatttttttctcccaagtttaccctc 24775255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 79 - 120
Target Start/End: Original strand, 37106886 - 37106927
Alignment:
Q  79 atttccaatataactttaattttttccttccaactttaccct 120  Q
    |||| ||||| |||||||||||||| ||||||||||||||||    
T  37106886 attttcaatacaactttaatttttttcttccaactttaccct 37106927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 25332568 - 25332631
Alignment:
Q  53 tttgtttcaaaatgaatgtcat-ttacatttccaatataactttaattttttccttccaacttta 116  Q
    |||||||||||||||| |||   |||||||||||||  |||||||||||||| ||||||||||||    
T  25332568 tttgtttcaaaatgaacgtcgccttacatttccaatgcaactttaatttttt-cttccaacttta 25332631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 190
Target Start/End: Complemental strand, 45148042 - 45147982
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgt-ctttttcttataaagtaagggcagtt 190  Q
    |||||||||||||| |||||||||||||  ||||  ||||| |||||||||||| ||||||    
T  45148042 tctcacacaatttttaatgcaactttaagattgtatttttttttataaagtaagagcagtt 45147982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 114; Significance: 6e-58; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 61 - 238
Target Start/End: Complemental strand, 12219 - 12040
Alignment:
Q  61 aaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaacttta 157  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| | | ||||||||  |||||||||||||||||||||||    
T  12219 aaaatgaatgtcattttacatttccaatataactttaatttttttcttccaactttaccctctcaaacttttctctcacacaattttcaatgcaacttta 12120  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    | ||||||||||||||||||||||| |||||||| ||||||||||||| || |||||||||||||||| ||| ||||||||    
T  12119 agtttgtctttttcttataaagtaa-ggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatct 12040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 1e-56; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 236
Target Start/End: Complemental strand, 28044319 - 28044101
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||||        || |||| ||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||| |    
T  28044319 gtttcaaaatgagtgtcactttagtaaaaaaaatt-gttttaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttatc 28044221  T
Q  119 ctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgatt 216  Q
    ||| |||  |||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  28044220 ctctccaatttttctctcacacaattttcaatacaactttaattttgtctttttcttataaagtaagggcagtttagtaaaaacgttatatccaatgatt 28044121  T
Q  217 atttcattcaatttcttaat 236  Q
    ||||||||  ||||||||||    
T  28044120 atttcattttatttcttaat 28044101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 53 - 240
Target Start/End: Complemental strand, 36447757 - 36447567
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacaca--attttcaatg 149  Q
    ||||||| ||||||||| ||| |||| |||| ||||| |||||||||||||| ||||||||||||||||  ||| |||||||| ||||  |||||||||     
T  36447757 tttgttttaaaatgaatatcactttatattttcaatacaactttaatttttttcttccaactttaccctttccaacttttctctcacataattttcaatt 36447658  T
Q  150 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    ||||||||||||| ||||||||||||||||||| | ||||||  |||||| |||||||||| | |||||||||||| ||||||||||||||    
T  36447657 caactttaattttatctttttcttataaagtaaagacagtttaataaaagagttatatccagtaattatttcattccatttcttaatctgt 36447567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 18886667 - 18886843
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgca 151  Q
    ||||||| ||||||||| ||| ||||||||| ||||| |||||||||||||| |||||||||||          |||||   ||||||||||||||||||    
T  18886667 tttgttttaaaatgaatctcactttacattttcaatacaactttaatttttttcttccaacttt----------tcttt---cacacaattttcaatgca 18886753  T
Q  152 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| |||||||| ||||||    
T  18886754 actttaattttgtcttttccttataaagtaagggcagtttagtaaaagcgttatatctaatgattatttcattccatttcttagtctgtg 18886843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 32275203 - 32275393
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttc--tcacacaattttcaatgc 150  Q
    ||||||||||||||||| || |||||||||| |||| |||||||||||||| ||||||||||||||||| | | ||||||  ||||||||||||||||||    
T  32275203 ttgtttcaaaatgaatgccactttacatttctaatacaactttaatttttttcttccaactttaccctctcaaacttttccttcacacaattttcaatgc 32275302  T
Q  151 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||| ||||  ||||||||||||||||| |||||||| ||||||  || || |  |||||||||||||||  |||||||||| ||||    
T  32275303 aactttaagtttgattttttcttataaagtaaaggcagtttagtaaaaacgtcatgtttaatgattatttcatttcatttcttaatatgtg 32275393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 41906089 - 41905890
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct--------ccccatcttttctc--acacaat 141  Q
    ||||||| ||||| ||||||| |||||||||| |||| |||||||| ||||  ||||||||||||||          | ||| ||||||||  |||||||    
T  41906089 tttgttttaaaataaatgtcactttacatttctaatacaactttaagttttctcttccaactttacctcaataaatactccaacttttctcttacacaat 41905990  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |  |||||||||||||||    
T  41905989 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagtaaaagcgttatatccaatgattatttcagttcatttcttaatctgtg 41905890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 22627495 - 22627313
Alignment:
Q  60 caaaatgaatgtca-tttacatttccaatataactttaattttttc--cttccaactttaccctccccatcttttctc--acacaattttcaatgcaact 154  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||   ||||||||||||||||| ||| ||||||||  ||||||||||||||||||||    
T  22627495 caaaatgaatgtcactttacatttccaatacaactttaatttttttttcttccaactttaccctctccaacttttctctcacacaattttcaatgcaact 22627396  T
Q  155 ttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 237  Q
    |||| |||||||| || ||||||||||| |||||||| ||||| ||||||| |  || ||||||||||||  ||| |||||||    
T  22627395 ttaagtttgtcttatttttataaagtaaaggcagtttagtaaatgtgttatgtttaacgattatttcatttcattccttaatc 22627313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 53 - 238
Target Start/End: Complemental strand, 33056433 - 33056242
Alignment:
Q  53 tttgtttcaaaatgaatgtcattt----acatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttca 146  Q
    ||||||||||||| ||||||||||    |||||||||||| ||||||||||||||| ||| ||||||| |||| ||| ||||||||  ||||||||||||    
T  33056433 tttgtttcaaaataaatgtcattttacaacatttccaatacaactttaattttttctttc-aactttatcctctccaacttttctctcacacaattttca 33056335  T
Q  147 atgcaactttaattttgtctttttctta-taaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||  ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||| |  |||||||||||||||  ||| ||||||||    
T  33056334 atgcagttttaaatttgtctttttcttaataaagtaagggcagtttagtaaaagtgttatgtttaatgattatttcatttcattccttaatct 33056242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 42121549 - 42121740
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctccccatcttttctcaca--caattttcaatg 149  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||||||||  ||||||||||||| ||| ||| |||||||| ||  ||||||||||||    
T  42121549 ttgtttcaaaatgaatgtcactttatatttccaatacaactttaattttttttcttccaactttactctctccaacttttctctcaaacaattttcaatg 42121648  T
Q  150 caactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||| | | ||||||||| ||||||||||| |||||| ||||||||| ||| || ||||||||||| |||  ||| |||||||||||    
T  42121649 caactttaagtgtatctttttctaataaagtaaggtcagtttagtaaaagtgatatgtctaatgattatttgatttcattccttaatctgtg 42121740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 64 - 241
Target Start/End: Complemental strand, 34002277 - 34002087
Alignment:
Q  64 atgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaattttcaatgca 151  Q
    |||||||||| ||||||||||||||| || ||||||||| | |||||||||||||||||          ||| ||||||||  |||||||||||||||||    
T  34002277 atgaatgtcactttacatttccaatacaagtttaattttattcttccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgca 34002178  T
Q  152 actttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||||||||||||||||||||| ||| ||||||| | ||| ||||||||||||||||||||||||||  |||||||||||||||    
T  34002177 actttaattttgtctttttcttataaagtaaagtgcagtttagcaaaggtgttatatccaatgattatttcatttcatttcttaatctgtg 34002087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 17869235 - 17869435
Alignment:
Q  53 tttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaa 140  Q
    |||||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| ||||          | ||||||||||  ||||||    
T  17869235 tttgtttcaaaatgaatgtcattttacatttccaatgcaactttaattttttccttccaactttatcctcaataaatactcaatcttttctctcacacaa 17869334  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    |||||||||||||||||| ||||| ||||||||||||||||| | || |||  |||||||||||| || |||||||||||||||  ||| ||||||||||    
T  17869335 ttttcaatgcaactttaagtttgtatttttcttataaagtaaagacaatttaataaaagtgttatgtctaatgattatttcatttcattccttaatctgt 17869434  T
Q  241 g 241  Q
    |    
T  17869435 g 17869435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 40207566 - 40207379
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||| |        ||| ||||||||||||||||||| | ||||  |||| |||||||||||||| ||| |||||||| |    
T  40207566 gtttcaaaatgagtgtcactttagccaaaaaaaattgcttcaaaatgaatgtcattttatatttttaatacaactttaatttttttctttcaactttatc 40207467  T
Q  119 ctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 207  Q
    |||  || |||||| | ||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||| |||||||||||||||    
T  40207466 ctcttcaacttttc-ctcacaattttcaatgcaattttaagtttgtcattttcttataaagtaagggcagtttagtaaaagtgttatat 40207379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 34733394 - 34733500
Alignment:
Q  128 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaa 227  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||| || |||||||||||||||  |    
T  34733394 ttttctctcacaattttcaatgcaactttaagtttgtctttttcttataaagtaagggtagtttagtaaaagtgttatgtctaatgattatttcatttca 34733493  T
Q  228 tttctta 234  Q
    |||||||    
T  34733494 tttctta 34733500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 3681077 - 3680878
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctcacaca--at 141  Q
    |||||| ||||||||||||| ||||||||| ||||| |||||||||||| | |||||||||||||| |         | | | |||||||| ||||  ||    
T  3681077 ttgttttaaaatgaatgtcactttacattttcaatacaactttaattttgttcttccaactttaccattaataaatacactaacttttctctcacagaat 3680978  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||||||| |||| || |||||||||||||||| |||| ||||||||||    
T  3680977 tttaaatgcaactttaaatttgtctttttcttataaagtaagagcagtttagtaaaagttttatgtctaatgattatttcattccattttttaatctgtg 3680878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 53 - 240
Target Start/End: Original strand, 1103482 - 1103681
Alignment:
Q  53 tttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctccc---------catcttttctc--acacaa 140  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||| ||| |||||||||||||||||           || ||||||||  ||||||    
T  1103482 tttgtttcaaaatgaatgtcattttacatttccaatacaactttaattgttttcttccaactttaccctcaataaatacttcaacttttctctcacacaa 1103581  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    ||||||||| |||||||| ||||| ||||| |||||||||||||| ||||| |||||| |||| | ||   |||||||||||||  ||||||||||||||    
T  1103582 ttttcaatgtaactttaaatttgttttttttttataaagtaagggtagtttagtaaaaatgttttgtctggtgattatttcattttatttcttaatctgt 1103681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 20 - 241
Target Start/End: Original strand, 40298812 - 40299036
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||| |        |||||||||||||||||||| ||||||||| ||||| |||||||||||||| || |||||||||||    
T  40298812 gtttcaaaatgagtgtcactttagccaaaaaaaattgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctcccaactttacc 40298911  T
Q  119 ct---------ccccatcttt--tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 207  Q
    ||         | ||| ||||  ||||||||||||||||||| |||||||| ||||||||||||||         ||||||||| ||||||||||||| |    
T  40298912 ctcaataaatactccaacttttctctcacacaattttcaatgtaactttaagtttgtctttttctt---------gggcagtttagtaaaagtgttatgt 40299002  T
Q  208 ccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||| |||||||||||  ||| |||||| ||||    
T  40299003 ccaattattatttcatttcattccttaatttgtg 40299036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 42259614 - 42259521
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    ||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||| ||| ||||||||||||| || ||| ||||| |||||    
T  42259614 tctcacataattttcaatgcaactttaagcttgtctttttcttataaagtaagggcattttagtaaaagtgttatgtctaataattatctcatt 42259521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 205
Target Start/End: Original strand, 26963478 - 26963643
Alignment:
Q  54 ttgtttcaaaatgaatgtc-atttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc----acaca 139  Q
    |||||||||||| |||||| |||||||||||||||  |||||||||||||| |||||||||||||||||          ||| ||||||||    ||| |    
T  26963478 ttgtttcaaaataaatgtctatttacatttccaatgcaactttaatttttttcttccaactttaccctcaatgaatactccaacttttctctctcacata 26963577  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    ||||||||||||||||||| |||||||||||||||||||||||||  | ||| |||||| ||||||    
T  26963578 attttcaatgcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaattgttat 26963643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 32345991 - 32345789
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc----acac 138  Q
    ||||||||||||||||||||  ||||||||| ||||  |||||||||||||| |||||||||||||||||          ||| ||||||||    ||||    
T  32345991 tttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacac 32345892  T
Q  139 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||  |   ||| || || |||||||||||||||||    
T  32345891 aattttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactactttattcaatttcttaatct 32345792  T
Q  239 gtg 241  Q
    |||    
T  32345791 gtg 32345789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 36836013 - 36836123
Alignment:
Q  9 tatactcatctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttcctt 107  Q
    ||||||| || ||||||||||||||||| ||||||||       ||||||||||||||||||||  ||||||||| ||||| |||||||||||||| |||    
T  36836013 tatactcctccgtttcaaaatgagtgtcgctttagtcaaaataatttgtttcaaaatgaatgtcgctttacattttcaatacaactttaatttttttctt 36836112  T
Q  108 ccaactttacc 118  Q
    |||||||||||    
T  36836113 ccaactttacc 36836123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 19906413 - 19906555
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc---------cccatcttt--tctcacacaat 141  Q
    |||||||||||||||||||  ||||||||||||||| |||||| ||||||| |||||||||||||||||          ||| ||||  |||| ||||||    
T  19906413 ttgtttcaaaatgaatgtcgctttacatttccaatacaacttttatttttttcttccaactttaccctcaataaatattccaacttttctctctcacaat 19906512  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||| |||||||| ||| ||||||||||||    
T  19906513 tttcaatgcaactttaagtttgtcttgttcctataaagtaagg 19906555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 238
Target Start/End: Complemental strand, 26527454 - 26527356
Alignment:
Q  139 aattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||||||||||||||||| ||| | |||||||||||||||||  ||||||| ||||| ||||||| || |||||||||| ||||| ||||||||||||    
T  26527454 aattttcaatgcaactttaaattttt-tttttcttataaagtaaaagcagtttagtaaaggtgttatgtctaatgattattgcattccatttcttaatct 26527356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 218
Target Start/End: Complemental strand, 42010640 - 42010553
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattat 218  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||||| |||||||||||| |||||| | |||| || |||||||||    
T  42010640 tctcatacaattttcaatgtaactttaagtttgtctttttcttataaaataagggcagtttagtaaaaatattatgtctaatgattat 42010553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 22597195 - 22597297
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||| |       ||||||||||||||||||||| ||||||||| ||||| |||||||||||||| ||| |||||||| |    
T  22597195 gtttcaaaatgagtgtcactttagccaaaagaatttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttcaactttaac 22597294  T
Q  119 ctc 121  Q
    |||    
T  22597295 ctc 22597297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 30514972 - 30515037
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  30514972 ttgtttcaaaatgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 30515037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 48838750 - 48838635
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtcttt-----ttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 225  Q
    |||||||||||||||||||||||||||| |||||||||     || ||||||||||||| |||||| ||| || |||||| || |||||||||||||||     
T  48838750 tctcacacaattttcaatgcaactttaaatttgtctttttttatttttataaagtaaggtcagtttagtataaatgttatgtctaatgattatttcattt 48838651  T
Q  226 aatttcttaatctgtg 241  Q
     ||| |||||| ||||    
T  48838650 tattccttaatttgtg 48838635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 10684894 - 10684820
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||||||||  | ||| |||||| ||||||    
T  10684894 tctcacacaattttcaattcaactttaagtttgtctttttcttataaagtaaggttattttagtaaaattgttat 10684820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 39117553 - 39117479
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  39117553 tctcacacaattttcaatgcaactttaagtttgtcttattcttataaagtaaggttattttagtaaaattgttat 39117479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 19288536 - 19288434
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||||         || ||||||||||||||||| |||||||||| |||| |||||||||||||| |||| |||||||||    
T  19288536 gtttcaaaatgagtgtcactttagtaaaaaaaaattatttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttctaactttacc 19288437  T
Q  119 ctc 121  Q
    |||    
T  19288436 ctc 19288434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 43813500 - 43813431
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||| ||||||||||||| |||| |||||||||| |||||||||||||| |||||||||||||||||    
T  43813500 tttgttttaaaatgaatgtcactttatatttccaatacaactttaatttttttcttccaactttaccctc 43813431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 183
Target Start/End: Complemental strand, 29001736 - 29001577
Alignment:
Q  14 tcatctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaac 112  Q
    ||||| |||| |||||||||||||||||||||        |||||||||||| |||||| ||| |||||||||||||||| |||||||| | ||||||||    
T  29001736 tcatccgttttaaaatgagtgtcactttagtcaaaaataattgtttcaaaattaatgtcgttttacatttccaatataaccttaattttattcttccaac 29001637  T
Q  113 tttaccctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 183  Q
    |||             |||||||||||||||||||||||||||||| ||||| || ||| |||||| ||||    
T  29001636 tttta-----------tttctcacacaattttcaatgcaactttaagtttgttttgttcctataaaataag 29001577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 183
Target Start/End: Complemental strand, 31416906 - 31416763
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc----------ccatcttt---tctcacaca 139  Q
    |||||| ||||||||| ||| ||||||||| ||||| |||||||||||||| |||||||||||||||||           | || |||   |||||||||    
T  31416906 ttgttttaaaatgaatatcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatacttcaatttttctctctcacaca 31416807  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaag 183  Q
    ||||||||||||||||||| |||||||| |||||||||| ||||    
T  31416806 attttcaatgcaactttaaatttgtcttgttcttataaaataag 31416763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 6521907 - 6521960
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||||| ||| ||||| |||||||||||||||||||||||||    
T  6521907 tctcacacaattttcaatacaattttaagtttgtctttttcttataaagtaagg 6521960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 120
Target Start/End: Complemental strand, 10685024 - 10684918
Alignment:
Q  15 catctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatg-tcatttacatttccaatataactttaattttttccttccaact 113  Q
    ||||| |||||||||||||||| |||||| |       |||||||||||||||||| |  ||||||||| ||||  |||||||||||||| |||||||||    
T  10685024 catctctttcaaaatgagtgtcgctttagccaaaataatttgtttcaaaatgaatgctgctttacattttcaatgcaactttaatttttttcttccaact 10684925  T
Q  114 ttaccct 120  Q
    |||||||    
T  10684924 ttaccct 10684918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 19277110 - 19277057
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||||||||||||||| |||||||| ||| ||||||||||||    
T  19277110 tctcacacaattttcaatgcaactttaagtttgtcttgttcatataaagtaagg 19277057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 30833162 - 30833066
Alignment:
Q  128 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 225  Q
    ||||||||||||||||||| || |||| ||| |||||||||||| ||||||  || | || ||| |||||||||||||||| ||| ||||||||||||    
T  30833162 ttttctcacacaattttcagtgtaactctaagtttgtctttttcatataaaacaa-gacaatttagtaaaagtgttatatctaataattatttcattc 30833066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 182
Target Start/End: Complemental strand, 36447225 - 36447083
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc----acaca 139  Q
    ||||||||||||||||||||||| |||||| ||||| || ||||||||||  |||||||||||| ||||          ||| ||||||||    |||||    
T  36447225 ttgtttcaaaatgaatgtcattttacattttcaatacaattttaatttttctcttccaactttatcctcattaaatactccaacttttctctctcacaca 36447126  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaa 182  Q
    |||||||||||||||||||  ||||||| ||||||||||||||    
T  36447125 attttcaatgcaactttaagcttgtcttattcttataaagtaa 36447083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 42044131 - 42044066
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||| ||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||    
T  42044131 tttcaaaattaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctc 42044066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 205
Target Start/End: Original strand, 47272240 - 47272313
Alignment:
Q  132 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||||||  ||||||||||| |||||| ||||||    
T  47272240 ctcacacaattttcaatgcaattttatgtttgtctttttcatataaaacaagggcagtttagtaaaattgttat 47272313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 224
Target Start/End: Complemental strand, 33845478 - 33845391
Alignment:
Q  128 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||         ||||||||| |||||||||||| ||  |||||||||||||||    
T  33845478 ttttctcgcacaattttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtgttacatgtaatgattatttcatt 33845391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 19920419 - 19920358
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||||| ||||||||||||||| |||||||||||||| ||  |||||||||||||    
T  19920419 aaaatgaatgtcactttacatttccaatacaactttaatttttttctctcaactttaccctc 19920358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 18733540 - 18733583
Alignment:
Q  128 ttttctcacacaattttcaatgcaactttaattttgtctttttc 171  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||    
T  18733540 ttttctcacacaactttcaatgcaactttaaatttgtctttttc 18733583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 5723090 - 5723128
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttt 169  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  5723090 tctcacacaattttcaatgcaactttaagtttgtctttt 5723128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 103
Target Start/End: Original strand, 18733452 - 18733502
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaatttttt 103  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  18733452 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttt 18733502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 121
Target Start/End: Complemental strand, 42259736 - 42259635
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||| ||||||||||||||         |||||| ||||||||||| |||| || ||| ||||| ||||||||||||||| |||||||||||||    
T  42259736 gtttcaaaataagtgtcactttagttaaaaaaaattgttttaaaatgaatgttattttacgttttcaatacaactttaattttttc-ttccaactttacc 42259638  T
Q  119 ctc 121  Q
    |||    
T  42259637 ctc 42259635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 5723006 - 5723069
Alignment:
Q  58 ttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||||| || | ||||||||||||    
T  5723006 ttcaaaatgaatgtcactttacattttcaatacaactttaatttttt-ctcctaactttaccctc 5723069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 182
Target Start/End: Original strand, 36836148 - 36836199
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 182  Q
    ||||||| |||||||||||||||||||| |||||||| ||  ||||||||||    
T  36836148 tctcacataattttcaatgcaactttaaatttgtcttgtttctataaagtaa 36836199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 121
Target Start/End: Complemental strand, 26527544 - 26527483
Alignment:
Q  61 aaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||| |||| |||||| ||||| |||||||||||||| |||| ||||||| ||||    
T  26527544 aaaatgaatgttattttacattttcaatacaactttaatttttttcttctaactttaacctc 26527483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 32873168 - 32873127
Alignment:
Q  194 taaaagtgttatatccaatgattatttcattcaatttcttaa 235  Q
    ||||| ||||||||| |||||||||| |||||||||||||||    
T  32873168 taaaaatgttatatctaatgattattgcattcaatttcttaa 32873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 112; Significance: 1e-56; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 48260008 - 48259818
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttct--cacacaattttcaatgc 150  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||| | | |||||||  |||||||||||||||||    
T  48260008 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctctcaaacttttctttcacacaattttcaatgc 48259909  T
Q  151 aactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||| ||| |||||||||||||||| |||||||||||  |||||||||||| || || ||||||||||||| ||| |||||||||||    
T  48259908 aactttaagtttatctttttcttataaagcaagggcagtttaataaaagtgttatgtctaacgattatttcattctattccttaatctgtg 48259818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 54 - 240
Target Start/End: Original strand, 11650056 - 11650254
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc----------cccatcttt-tctcacacaat 141  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||||||          || || ||| |||||||||||    
T  11650056 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccctcaataaatactccaatttttctctcacacaat 11650155  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    || |||||||||||||| |||||||||||||| ||||||||||||||||| |||||| |  |||||| |||| ||||||||||||||||||||||||||    
T  11650156 ttccaatgcaactttaagtttgtctttttcttttaaagtaagggcagtttagtaaaaatactatatctaatggttatttcattcaatttcttaatctgt 11650254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 57 - 241
Target Start/End: Complemental strand, 40061048 - 40060861
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctc--acacaattttcaatgcaac 153  Q
    ||||||||||||||||| ||||||||| ||||| ||||||||||||||  ||| |||||||||||| ||| ||||||||  ||| |||||||||||||||    
T  40061048 tttcaaaatgaatgtcactttacattttcaatacaactttaattttttttttcaaactttaccctctccaacttttctcttacaaaattttcaatgcaac 40060949  T
Q  154 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    | |||  || |||||||||||||||||||||||| ||| ||||||||||||| || ||| |||||||||||  |||||||||| ||||    
T  40060948 tataaaattatctttttcttataaagtaagggcaatttagtaaaagtgttatgtctaatcattatttcatttcatttcttaatatgtg 40060861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 54 - 237
Target Start/End: Complemental strand, 24041155 - 24040983
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctccccatcttttctcacacaattttcaatgca 151  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||||||||  ||||||||||| |             |||||||||||||||||||||    
T  24041155 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttttc-------------tctcacacaattttcaatgca 24041069  T
Q  152 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 237  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||| ||| |||||||    
T  24041068 actttaagtttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcattccattccttaatc 24040983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 84648 - 84473
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    |||||| ||||||||||||| ||||||||||||||| |||||||||||||| ||||||| ||| |             |||| |||||||||||||||||    
T  84648 ttgttttaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaatttttc-------------tctcgcacaattttcaatgcaa 84562  T
Q  153 ctttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||| ||||||||||||||||||||||||| || ||| ||||||||||||| || |||||||||||||||||||| |||||||||||    
T  84561 ctttaagtttgtctttttcttataaagtaaggacattttagtaaaagtgttatgtctaatgattatttcattcaattccttaatctgtg 84473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 52403563 - 52403672
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||||    
T  52403563 tctcacataattttcagtgcaactttaattttgtcttttccttataaagtaagggcagtttaataacagtgttatatccaatgattatttcattccattt 52403662  T
Q  231 cttaatctgt 240  Q
    ||||||||||    
T  52403663 cttaatctgt 52403672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 241
Target Start/End: Complemental strand, 1430666 - 1430491
Alignment:
Q  55 tgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaac 153  Q
    ||||||||||||||||||| |||||||||| |||| |||||||||||||| ||||||||||| |             || |||||||||| |||||||||    
T  1430666 tgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaacttttc-------------tcacacacaatttccaatgcaac 1430580  T
Q  154 tttaattttgtctttttcttataaagtaagg-gcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||| ||||||||||||||||||||||| | ||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||    
T  1430579 tttaagtttgtctttttcttataaagtaaagtgcagtttagtaaaagtgttatatctaattattatttcattaaatttcttaatctgtg 1430491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 43929683 - 43929881
Alignment:
Q  54 ttgtttcaaaatgaatgtcatttaca-tttccaatataactttaattttttccttccaactttaccctc----------cccatcttttctcacacaatt 142  Q
    |||||||||||||||||||| || || ||||||||| ||||||||||||||||||||||||||||||||          ||  | || ||||||| ||||    
T  43929683 ttgtttcaaaatgaatgtcaatttcagtttccaatacaactttaattttttccttccaactttaccctcaataaatactccacttttctctcacataatt 43929782  T
Q  143 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||| || ||||||||| || |||||||||||||||||||| || ||| | ||||||||||||| || ||||||||||||||||||||||||||| ||||    
T  43929783 ttcgatacaactttaagttagtctttttcttataaagtaatggaagtatagtaaaagtgttatgtctaatgattatttcattcaatttcttaatttgtg 43929881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 238
Target Start/End: Complemental strand, 5317765 - 5317535
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||  |       ||||||||||||||||||||| |||||| || ||||| |||||||||||||| ||||||||||||||    
T  5317765 gtttcaaaatgagtgtcactttatccaacaaaatttgtttcaaaatgaatgtcactttacaatttcaatacaactttaatttttttcttccaactttacc 5317666  T
Q  119 ctccc---------catcttttctcac-acaattttcaatgcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgttatat 207  Q
    |||           || |||||||| | |||||||||||||||||||||| ||||||||||||||||||| ||| ||||| ||| ||||||||||||| |    
T  5317665 ctcaataaatactacaacttttctctccacaattttcaatgcaactttaagtttgtctttttcttataaaataaggggcaatttagtaaaagtgttatgt 5317566  T
Q  208 ccaatgattatttcattcaatttcttaatct 238  Q
    | |||||||||||||||  ||| ||||||||    
T  5317565 ctaatgattatttcatttcattccttaatct 5317535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 98 - 241
Target Start/End: Original strand, 30006182 - 30006327
Alignment:
Q  98 ttttttccttccaactttaccctccccatcttttctcaca--caattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggta 195  Q
    |||||| ||| ||||||||||||| ||| |||||||| ||  ||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||| |||    
T  30006182 tttttttctttcaactttaccctctccaacttttctctcaaacaattttcaatgcaactttaaatttatctttttcttataaagtaagagcaatttagta 30006281  T
Q  196 aaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    | |||||||| || ||||||||||||||||||||  ||||||||||    
T  30006282 atagtgttatgtctaatgattatttcattcaattcattaatctgtg 30006327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 55 - 236
Target Start/End: Original strand, 1428865 - 1429059
Alignment:
Q  55 tgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaatt 142  Q
    ||||| ||||||||||||| |||||||||| |||| ||||| |||||||| ||| |||||||||||||          | | ||||||||  ||||||||    
T  1428865 tgttttaaaatgaatgtcactttacatttctaatacaacttaaatttttttcttgcaactttaccctcaataaatactcaaacttttctctcacacaatt 1428964  T
Q  143 ttcaatgcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 236  Q
    | |||| ||||||||| |||||| |||||||||||||||| ||||||||| |||||||||||||||| ||| |||||||||||||||||||||||    
T  1428965 tccaattcaactttaagtttgtccttttcttataaagtaaagggcagtttagtaaaagtgttatatctaataattatttcattcaatttcttaat 1429059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 15 - 241
Target Start/End: Complemental strand, 28751602 - 28751363
Alignment:
Q  15 catctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaa-tgtca-tttacatttccaatataactttaattttttccttccaac 112  Q
    |||| |||||||||||||||||||||||| |        || |||||||||||| ||||| ||||||||| ||||| |||||||||||||| ||||||||    
T  28751602 catccgtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaaatgtcactttacattttcaatacaactttaatttttttcttccaac 28751503  T
Q  113 tttaccctcc---------ccatcttttctcac--acaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtg 201  Q
    |||||||||          | | |||||||| |  ||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| |||||| ||    
T  28751502 tttaccctcaataaatactcaaacttttctctcgcacaattttcaatgtaactttaagtttgtccttttcttataaagtaagggcagtttagtaaaaatg 28751403  T
Q  202 ttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||| || ||||||||||| |||  ||| |||||||||||    
T  28751402 ttatgtctaatgattattttatttcattccttaatctgtg 28751363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 10691020 - 10690910
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||||||| ||||||| |||||| ||||||||| |||||||||||||||  ||||    
T  10691020 tctcacacaattttcaatgcaactttaagtttgtctttttcttacgaagtaagtgcagtttagtaaaaatgttatatctaatgattatttcatttcattt 10690921  T
Q  231 cttaatctgtg 241  Q
    |||||| ||||    
T  10690920 cttaatatgtg 10690910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 6332251 - 6332364
Alignment:
Q  128 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaa 227  Q
    |||||||||||||||||||||| |||||||  |||||||||||| ||||||  || |||||||| ||||||||||||| || ||||||||||||||||||    
T  6332251 ttttctcacacaattttcaatgtaactttatgtttgtctttttcatataaaacaaaggcagtttagtaaaagtgttatgtctaatgattatttcattcaa 6332350  T
Q  228 tttcttaatctgtg 241  Q
    ||||||||| ||||    
T  6332351 tttcttaatttgtg 6332364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 12002244 - 12002443
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttacc-----------ctccccatcttttctcacacaat 141  Q
    |||||| |||||||||||||||| |||||||||||| |||||||||||||| |||||| |||||||           ||||   | ||||||||||||||    
T  12002244 ttgttttaaaatgaatgtcattttacatttccaatacaactttaatttttttcttccagctttaccttcaataaatactccaacttttttctcacacaat 12002343  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||||||||| |||||||||||| ||||||  ||||||||||| |||||||| |||| ||  ||||||||||||||  ||| |||||| ||||    
T  12002344 tttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttagtaaaagtattatgtctgatgattatttcatttcattccttaatatgtg 12002443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 224
Target Start/End: Complemental strand, 17919971 - 17919793
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatct-----------tttctcacacaatttt 144  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||   || |           ||||||||||||||||    
T  17919971 tttcaaaatgaatatcactttacatttccaatacaactttaatttttttcttccaactttaccctcaatatatactctaacttttttctcacacaatttt 17919872  T
Q  145 caatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |||||||||||||| |||||||||||  ||||||  ||||||||||| ||||||||||||| |  |||||||||||||||    
T  17919871 caatgcaactttaagtttgtctttttaatataaaacaagggcagtttagtaaaagtgttatgt-taatgattatttcatt 17919793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 37437529 - 37437358
Alignment:
Q  74 tttacatttccaatataactttaattttttccttccaactttaccctccccatctttt---ctcacacaattttcaatgcaactttaattttgtcttttt 170  Q
    ||||||||| ||||| || ||||||| ||| ||| |||||||| |||| | |  ||||   ||||||||||||||||||||||||||| |||||||||||    
T  37437529 tttacattttcaatacaattttaattattttctttcaactttatcctctctaattttttctctcacacaattttcaatgcaactttaagtttgtcttttt 37437430  T
Q  171 cttataaagtaagggcagtttggt-aaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||||||||||||||| ||| || ||||||||||| || ||||| |||||||||  ||| |||||| ||||    
T  37437429 cttataaagtaagggcaatttagtaaaaagtgttatgtctaatgaatatttcatttcattccttaatatgtg 37437358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 43105667 - 43105562
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||| ||||||||||||||| ||||| ||||||||||||||||||| ||| || | ||| ||||||||||||| || |||||||||||||||||||||    
T  43105667 tctcacgcaattttcaatgcaattttaagtttgtctttttcttataaaataatggtaatttagtaaaagtgttatgtctaatgattatttcattcaattt 43105568  T
Q  231 cttaat 236  Q
    ||||||    
T  43105567 cttaat 43105562  T

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Target: chr1; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 50350046 - 50349812
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaat--gtca-tttacatttccaatataactttaattttttccttccaact--t 114  Q
    |||||||||||||| ||||||||| |        ||||||||||||||||  |||| ||||||||||||||| |||||||||||||| |||||| ||       
T  50350046 gtttcaaaatgagtatcactttagccaaaaaaaattgtttcaaaatgaatatgtcactttacatttccaatacaactttaatttttttcttccacctcaa 50349947  T
Q  115 taccctccccatcttt--tctcacacaattttcaatgcaactttaattttgtctttttc------ttataaagtaagggcagtttggtaaaagtgttata 206  Q
    ||    | | | ||||  |||||||||||||||||||||||||||| ||||||||||||      |||||||||||||||||||| |||||||||||||     
T  50349946 taaatactcaaacttttctctcacacaattttcaatgcaactttaagtttgtctttttcttataattataaagtaagggcagtttagtaaaagtgttatg 50349847  T
Q  207 tccaatgattatttcattcaatttcttaatctgtg 241  Q
    || |||||||||||||||| ||| |||||| ||||    
T  50349846 tctaatgattatttcattccattccttaatttgtg 50349812  T

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Target: chr1; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 241
Target Start/End: Original strand, 2459005 - 2459203
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccat---------cttttctcacacaatt 142  Q
    ||||||||||||||||||||  ||||||||| ||||  |||||||||||||| |||||||||||||||||  ||          |||||||| |||||||    
T  2459005 tttgtttcaaaatgaatgtcgctttacattttcaatgcaactttaatttttttcttccaactttaccctcaacaaatactcaaacttttctctcacaatt 2459104  T
Q  143 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||| ||||||||| ||||| |||||||||||||||||||  | ||| |||||| ||||||  |   ||| || |||||| ||||||||||||||||    
T  2459105 ttcaatacaactttaagtttgtatttttcttataaagtaaggttattttagtaaaattgttatgacatttgactacttcatttaatttcttaatctgtg 2459203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 38132322 - 38132202
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||| |           ||||||||||||||||||||||||    
T  38132322 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaatttttttcttccaacttttc-----------tttctcacacaattttcaatgcaa 38132234  T
Q  153 ctttaattttgtctttttcttataaagtaagg 184  Q
    |||||| | |||||| ||| ||||||||||||    
T  38132233 ctttaagtatgtcttgttcctataaagtaagg 38132202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 57 - 183
Target Start/End: Complemental strand, 44582931 - 44582791
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttt----tctcacacaatt 142  Q
    ||||||||| ||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||         | ||| ||||    ||||||| ||||    
T  44582931 tttcaaaataaatgtcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttctatctcacataatt 44582832  T
Q  143 ttcaatgcaactttaattttgtctttttcttataaagtaag 183  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  44582831 ttcaatgcaactttaagtttgtctttttcttataaagtaag 44582791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 45749554 - 45749470
Alignment:
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattc 225  Q
    ||||||||| || ||||| ||||||||||||||||||||||||||| |||| ||||||||||||| || ||||||||||| ||||    
T  45749554 ttttcaatgtaaatttaagtttgtctttttcttataaagtaagggcggtttagtaaaagtgttatgtctaatgattattttattc 45749470  T

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Target: chr1; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 26252116 - 26252260
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 139  Q
    |||||||||||||||||||| ||||||||||||||| ||||| |||||||| ||||||||||||||||         | | | ||||    |||||||||    
T  26252116 ttgtttcaaaatgaatgtcactttacatttccaatacaacttaaatttttttcttccaactttacccttaataaatactctaacttttttctctcacaca 26252215  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||| |||||||| |||||||||| |||||    
T  26252216 attttcaatgcaactttaagtttgtcttgttcttataaaataagg 26252260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 2245880 - 2245982
Alignment:
Q  136 cacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaa 235  Q
    |||||||||||||||| |||||| |||||||||||||||||||| || | |||||| |||||| | |||| |  |||||||| ||||||| |||||||||    
T  2245880 cacaattttcaatgcatctttaagtttgtctttttcttataaaggaatgacagtttagtaaaaatattatgtttaatgattacttcattccatttcttaa 2245979  T
Q  236 tct 238  Q
    |||    
T  2245980 tct 2245982  T

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Target: chr1; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 198
Target Start/End: Original strand, 22664937 - 22665091
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctcacacaattt 143  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||  || ||||||||||||||||         | ||| ||| |||| ||||||||    
T  22664937 ttgtttcaaaatgaatgtcactttacatttccaatacaacgttaattaatttcttccaactttaccctcaataaatactccaacttctctctcacaattt 22665036  T
Q  144 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaa 198  Q
    | ||| ||||||||| |||||||| ||||||||||||||||  ||||| ||||||    
T  22665037 ttaattcaactttaagtttgtcttgttcttataaagtaaggttagtttagtaaaa 22665091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 54 - 181
Target Start/End: Complemental strand, 255068 - 254926
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctcc---------ccatcttttctcac----ac 138  Q
    |||||||||||||||||||  ||||||||||||||  ||||||||||||||  |||||||||||||||||          ||| ||||||||||    ||    
T  255068 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaattttttttcttccaactttaccctcaataaatactccaacttttctcactcacac 254969  T
Q  139 aattttcaatgcaactttaattttgtctttttcttataaagta 181  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  254968 aattttcaatgcaactttaagtttgtctttttcttataaagta 254926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 12851739 - 12851870
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccat---------cttttc--tcacacaat 141  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||   ||         ||||||  ||| |||||    
T  12851739 ttgtttcaaaatgaatgtcactttacatttccaatagaactttaatttttttctcccaactttaccctcaatatatactcaaacttttcattcatacaat 12851838  T
Q  142 tttcaatgcaactttaattttgtctttttctt 173  Q
    ||| ||||||||||||||||||||||||||||    
T  12851839 ttttaatgcaactttaattttgtctttttctt 12851870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 203
Target Start/End: Original strand, 43755017 - 43755187
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||| |        || |||||||||||| |||| ||||||||| ||||| ||||||||||||||| |||||||||| |     
T  43755017 gtttcaaaatgagtgtcactttagccaaaaaaaattatttcaaaatgaacgtcactttacattttcaatacaactttaattttttc-ttccaacttttc- 43755114  T
Q  119 ctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgtt 203  Q
                |||||||||||||||||  ||||||||| |||||||||||||||| ||||||||||  ||| |||||||||||    
T  43755115 ------------tctcacacaattttcaaaacaactttaagtttgtctttttcttattaagtaagggcgatttagtaaaagtgtt 43755187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 205
Target Start/End: Original strand, 49894807 - 49894943
Alignment:
Q  57 tttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactt 155  Q
    ||||||||||||||| |||| |||||||||||| |||||||||||||| |||| |||||| |             ||||||||||||||||||| |||||    
T  49894807 tttcaaaatgaatgttattttacatttccaatacaactttaatttttttcttctaacttttc-------------tctcacacaattttcaatgtaactt 49894893  T
Q  156 taattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    ||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  49894894 taagtttgtcttattcttataaagtaaggttattttagtaaaattgttat 49894943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 241
Target Start/End: Original strand, 44583869 - 44583968
Alignment:
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    ||||||||||||| |||| ||||||||||||||||||| ||| |||||||| | |||| |||||| || ||||||||||| |||  |||||||||| |||    
T  44583869 ttttcaatgcaacattaagtttgtctttttcttataaaataa-ggcagtttaggaaaattgttatgtctaatgattattttatttcatttcttaatttgt 44583967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 216
Target Start/End: Complemental strand, 48320144 - 48319981
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacaca-attttcaatgca 151  Q
    |||||| ||||| ||||| | |||| |||| ||||| || |||||||||||| ||| |||||||| ||| |||  || |||| |||| | |||| |||||    
T  48320144 ttgttttaaaataaatgttactttatattttcaatacaaatttaattttttctttc-aactttactctctccaatttatctctcacacaatttcgatgca 48320046  T
Q  152 actttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgatt 216  Q
    ||||||| ||||||||| | |||||||||||||||| ||| |||||||| |||| || |||||||    
T  48320045 actttaagtttgtctttcttttataaagtaagggcaatttagtaaaagtcttatgtctaatgatt 48319981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 17806563 - 17806392
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||| |        |||||| ||||||| ||||  ||||||||||||||| |||||||||||||| ||||||| ||||||    
T  17806563 gtttcaaaatgagtgtcactttagccaaaaaaaattgttttaaaatgagtgtcgctttacatttccaatacaactttaattttttacttccaattttacc 17806464  T
Q  119 ctcc---------ccatcttttctcaca--caattttcaatgcaactttaattttgtctttttcttataaag 179  Q
     ||          ||| |||||||| ||  ||||||||||||||| ||||| ||||||||||||||||||||    
T  17806463 ttcaataaatactccaacttttctctcatacaattttcaatgcaattttaagtttgtctttttcttataaag 17806392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 50158342 - 50158276
Alignment:
Q  172 ttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||  ||||||||||||    
T  50158342 ttataaagcaagggaagtttagtaaaagtgttatatccaatgattattgcattatatttcttaatct 50158276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 224
Target Start/End: Original strand, 40719020 - 40719195
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc-----------ctccccatcttttctcacacaattttcaat 148  Q
    ||||||||||||| |||||||||  |||| |||||||||||||| ||||||||||||||           ||||   | |||||| |||||||| |||||    
T  40719020 aaaatgaatgtcaatttacatttttaatacaactttaatttttttcttccaactttaccttcaataaatactccaacttttttcttacacaattctcaat 40719119  T
Q  149 gcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
     ||||||||| ||| |||||||| ||||||  || |||||||| |||||| ||| || || |||||||||||||||    
T  40719120 acaactttaaatttatctttttcatataaaacaatggcagtttagtaaaaatgtgatgtctaatgattatttcatt 40719195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 42650314 - 42650261
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  42650314 tctcacacaattttcaatgcaattttaagtttgtctttttcttataaactaagg 42650261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 57 - 121
Target Start/End: Complemental strand, 45377301 - 45377236
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||| || ||||||||||||||    
T  45377301 tttcaaaatgaatgtcactttacatttccaatacaactttactttttttctcccaactttaccctc 45377236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 182
Target Start/End: Complemental strand, 5854289 - 5854238
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 182  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  5854289 tctcacacaattttcaatgcaaccttaaggttgtctttttcttataaagtaa 5854238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 672346 - 672300
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataa 177  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||    
T  672346 tctcacacaattttcaatgcaaatttaagtttgtctttttcttataa 672300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 15698905 - 15698705
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc--------ccca---tcttttctcacacaat 141  Q
    |||||| ||||||||||||| |||| |||||||||| |||||||||||| | ||||||||||||| |||        | ||   | || ||||||| |||    
T  15698905 ttgttttaaaatgaatgtcactttatatttccaatacaactttaattttcttcttccaactttactctcaataaatactcaaacttttctctcacataat 15698806  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagta-agggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    |||||||  |||||||| ||| |||||||||||||||||| | || |||||  | |||||||||| || ||||||||||| |||  ||| |||||| |||    
T  15698805 tttcaatagaactttaagtttatctttttcttataaagtacatggtagtttatttaaagtgttatgtctaatgattatttaattttattccttaatttgt 15698706  T
Q  241 g 241  Q
    |    
T  15698705 g 15698705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Complemental strand, 28200287 - 28200234
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||| ||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  28200287 tctcgcacaattttcaatacaactttaagtttgtatttttcttataaagtaagg 28200234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 9552420 - 9552368
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaag 183  Q
    ||||||| ||||||||||||||||||||  ||||||| |||||||||||||||    
T  9552420 tctcacataattttcaatgcaactttaagattgtcttgttcttataaagtaag 9552368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 44024543 - 44024611
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||||||||| |  ||||||||| ||||  |||||||||||||| |||||||||||||||||    
T  44024543 ttgtttcaaaatgaatgccgctttacattttcaatgcaactttaatttttttcttccaactttaccctc 44024611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 43738317 - 43738214
Alignment:
Q  133 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttct 232  Q
    |||| |||||||||| | |||||||  ||| ||||||||||||||||||| || ||||| |||||| | |||| || ||| ||||||| |||  ||||||    
T  43738317 tcacgcaattttcaaagtaactttatatttatctttttcttataaagtaaaggtagtttagtaaaaatattatgtctaataattattttatttcatttct 43738218  T
Q  233 taat 236  Q
    ||||    
T  43738217 taat 43738214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 181
Target Start/End: Complemental strand, 35149436 - 35149394
Alignment:
Q  139 aattttcaatgcaactttaattttgtctttttcttataaagta 181  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  35149436 aattatcaatgcaactttaattttatctttttcttataaagta 35149394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 57 - 116
Target Start/End: Complemental strand, 50158458 - 50158397
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaatt-ttttccttccaacttta 116  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||| |||| ||||||||||||    
T  50158458 tttcaaaatgaatgtcactttacattttcaatacaactttaattttttttcttccaacttta 50158397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 101
Target Start/End: Complemental strand, 9552484 - 9552436
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaatttt 101  Q
    |||||| |||||||||||||||| |||||||||||| ||||||||||||    
T  9552484 ttgttttaaaatgaatgtcattttacatttccaatacaactttaatttt 9552436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 50591381 - 50591309
Alignment:
Q  133 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    |||||||||||||||||||| ||||| |||||||| ||| |||||| |||||  | ||| |||||| ||||||    
T  50591381 tcacacaattttcaatgcaattttaagtttgtcttgttcctataaaataaggttattttagtaaaattgttat 50591309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 26582923 - 26582985
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaacttt 115  Q
    |||||| ||||| ||||| | ||||||||||||||| |||||||||||||| |||| ||||||    
T  26582923 ttgttttaaaataaatgttactttacatttccaatacaactttaatttttttcttcgaacttt 26582985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 2245791 - 2245852
Alignment:
Q  61 aaaatgaatgtcat-ttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||||||||||  |||||||| ||||| ||||||||| |||| ||| |||||||||||||    
T  2245791 aaaatgaatgtcaccttacattttcaatacaactttaatctttttctttcaactttaccctc 2245852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 5854381 - 5854312
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||| ||| ||||||  ||||||||||||||  ||||||||||||||  ||||||||||| ||||    
T  5854381 tttgtttcagaataaatgtcgctttacatttccaatgcaactttaatttttttattccaactttatcctc 5854312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 14 - 43
Target Start/End: Complemental strand, 48260050 - 48260021
Alignment:
Q  14 tcatctgtttcaaaatgagtgtcactttag 43  Q
    ||||||||||||||||||||||||||||||    
T  48260050 tcatctgtttcaaaatgagtgtcactttag 48260021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 15647215 - 15647150
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct 120  Q
    |||||||||||||||||||| ||||||||| ||||| || |||  |||||| || |||||||||||||    
T  15647215 ttgtttcaaaatgaatgtcactttacattttcaatacaaattt--tttttttctcccaactttaccct 15647150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 118
Target Start/End: Complemental strand, 42650383 - 42650339
Alignment:
Q  74 tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||| |||| |||||||||||||| |||||| |||||||    
T  42650383 tttacatttctaatacaactttaatttttttcttccagctttacc 42650339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 117
Target Start/End: Complemental strand, 43738408 - 43738344
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttac 117  Q
    |||||| ||||||||||||| || |||||| ||||| ||||| |||||||| ||| |||||||||    
T  43738408 ttgttttaaaatgaatgtcacttcacattttcaatacaacttaaatttttttctttcaactttac 43738344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 120
Target Start/End: Original strand, 44583769 - 44583837
Alignment:
Q  53 tttgtttcaaaatgaatgtcat-ttacatttccaatataactttaattttttccttccaactttaccct 120  Q
    ||||||| |||||||||||||  ||||||||  |||| |||||||||||||| ||||  ||||||||||    
T  44583769 tttgttttaaaatgaatgtcaccttacatttttaatacaactttaatttttttcttctgactttaccct 44583837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 2e-51; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 236
Target Start/End: Complemental strand, 1924855 - 1924634
Alignment:
Q  17 tctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaacttt 115  Q
    ||||||||||||||||||||||||||| |       ||||||| |||||||||||||||| |||||| ||||| ||||||||||||||  ||| |||||     
T  1924855 tctgtttcaaaatgagtgtcactttagccaaaaaaatttgttttaaaatgaatgtcattttacattttcaatacaactttaattttttttttc-aacttc 1924757  T
Q  116 accctccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatg 213  Q
    |||||| ||| ||||||||  |||||||||||||||||||||||||||||| |||| ||||||||||||| | ||||| ||||||  |||||||||||||    
T  1924756 accctctccaacttttctctcacacaattttcaatgcaactttaattttgtattttccttataaagtaagagaagtttagtaaaaacgttatatccaatg 1924657  T
Q  214 attatttcattcaatttcttaat 236  Q
    |||||||||||  ||||||||||    
T  1924656 attatttcattatatttcttaat 1924634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 224
Target Start/End: Complemental strand, 12828835 - 12828653
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccc---------catcttttctc--acacaat 141  Q
    |||||||||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||           || ||||||||  |||||||    
T  12828835 ttgtttcaaaatgaatttcactttacatttccaatacaactttaatttttttcttccaactttaccctcaataaatacttcaacttttctctcacacaat 12828736  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||    
T  12828735 tttcaatgcaactttaagcttgtctttttcttataaagtaagggcagtttagtaaaagtgttatgtctaatgattatttcatt 12828653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 241
Target Start/End: Original strand, 29915499 - 29915740
Alignment:
Q  15 catctgtttcaaaatgagtgtcactttagtcnnnnnnnt-ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaa 111  Q
    |||| ||||||||||||||||||||||||||         |||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||    
T  29915499 catccgtttcaaaatgagtgtcactttagtcaaaaaaaaattgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaa 29915598  T
Q  112 ctttaccctcc---------ccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaag 199  Q
    ||||||||||          ||| ||||||||  ||||||||| |||||||||||||  ||||||||||||||||||||| || |||||||| |||||||    
T  29915599 ctttaccctcaataaatactccaacttttctctcacacaatttccaatgcaactttatgtttgtctttttcttataaagtaaatggcagtttagtaaaag 29915698  T
Q  200 tgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||| || ||| ||||||||||||||||||||||| ||||    
T  29915699 tgttatttctaattattatttcattcaatttcttaatatgtg 29915740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 54 - 241
Target Start/End: Complemental strand, 31275796 - 31275596
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctcc---------ccatctttt--ctcacacaa 140  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||          ||| |||||  |||||||||    
T  31275796 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttttctcacacaa 31275697  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    |||||||||||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||  || |||| ||||||||||   || ||||||||||    
T  31275696 ttttcaatgcaactttaagtttgtctttttcatataaaacaagggcagtttggtaaaagtgttacgtctaatggttatttcatttctttccttaatctgt 31275597  T
Q  241 g 241  Q
    |    
T  31275596 g 31275596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 238
Target Start/End: Complemental strand, 26669247 - 26669056
Alignment:
Q  59 tcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctcacaca--attttca 146  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||  | |||||||||| ||||          ||| |||||||| ||||  |||||||    
T  26669247 tcaaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttca 26669148  T
Q  147 atgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||| |||||||||||  ||||||||||||    
T  26669147 atgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaatct 26669056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 23936773 - 23936538
Alignment:
Q  17 tctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaacttt 115  Q
    |||||||||||||||||||||||||||           ||||||||||||||||| | ||||||||| ||||  |||||| ||||||| |||||||||||    
T  23936773 tctgtttcaaaatgagtgtcactttagcaaaaaaaaactgtttcaaaatgaatgttactttacattttcaatgcaactttcatttttttcttccaacttt 23936674  T
Q  116 accctcc---------ccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttat 205  Q
    ||||||          ||| | |||||| ||||||||||||||||||||||| ||||| ||||||||||||||| ||||||| ||  |||||| ||||||    
T  23936673 accctcaatatatactccaacctttctctcacaattttcaatgcaactttaaatttgtttttttcttataaagtaaagggcaattcagtaaaaatgttat 23936574  T
Q  206 atccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||| |||||||||||||||| |||||||||| ||||    
T  23936573 atctaatgattatttcattccatttcttaatatgtg 23936538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 29927205 - 29927405
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctcc---------ccatcttttctcacac--aa 140  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||  |||||||||||||||||          ||| |||||||| ||   |     
T  29927205 ttgtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaatactccaacttttctctcatgtag 29927304  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    |||||||||||||||||| |||||||||||||||||||||||||  |  || ||||||||||||| || |||||||||||||||| |||| |||||||||    
T  29927305 ttttcaatgcaactttaagtttgtctttttcttataaagtaaggatatgttagtaaaagtgttatgtctaatgattatttcattctattttttaatctgt 29927404  T
Q  241 g 241  Q
    |    
T  29927405 g 29927405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 32258720 - 32258910
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct----------ccccatctttt---ctcacaca 139  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||| |||          | ||| |||||   ||||||||    
T  32258720 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaacctaaaaaaaatactccaactttttctctcacaca 32258819  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 239  Q
    |||||||||||||||||||||||           |||||| ||||||||||| ||||||| |||||||||||||||||||||| || |||||||||||||    
T  32258820 attttcaatgcaactttaatttt-----------ataaagcaagggcagtttagtaaaagcgttatatccaatgattatttcaatcgatttcttaatctg 32258908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 34439470 - 34439368
Alignment:
Q  135 acacaattttcaatgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttctt 233  Q
    ||||||||| |||||||||||||  ||||||||||||||||||| | ||||||| |||  ||||| ||||||||| |||||||||||||||  |||||||    
T  34439470 acacaatttccaatgcaactttatgtttgtctttttcttataaaataaagggcaatttaataaaaatgttatatctaatgattatttcatttcatttctt 34439371  T
Q  234 aat 236  Q
    |||    
T  34439370 aat 34439368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 17345290 - 17345146
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc----acaca 139  Q
    |||||| ||||||||| ||| |||||||||| |||| ||||||||| |||| |||||||||||||||||          ||| ||||||||    |||||    
T  17345290 ttgttttaaaatgaatatcactttacatttctaatacaactttaatatttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 17345191  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||| || |||||||| ||||||||||||||||    
T  17345190 attttcaatgcaacttgaagtttgtcttgttcttataaagtaagg 17345146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 6143082 - 6143147
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||| |||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||    
T  6143082 ttgttttaaaatgaatgtcattttacatttccaattcaactttaatttttttcttccaactttacc 6143147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 182
Target Start/End: Original strand, 34576542 - 34576684
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 139  Q
    |||||| ||||||||| |||||| |||||||||||| |||||||||||||| |||||||||||| |||         |  || ||||    |||||||||    
T  34576542 ttgttttaaaatgaatatcattttacatttccaatacaactttaatttttttcttccaactttatcctcaataaatacttcaacttttctctctcacaca 34576641  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaa 182  Q
    ||||||||||||||||||| |||||||| ||||| ||||||||    
T  34576642 attttcaatgcaactttaagtttgtcttgttcttgtaaagtaa 34576684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 4124009 - 4123941
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||||||||||||||||| |||||||||  |||| |||||||||||||| ||| |||||||||||||    
T  4124009 ttgtttcaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctc 4123941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 11785255 - 11785189
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||||||||||| ||||| ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  11785255 ttgtttcaaaatga-tgtcactttacatttccaatacaactttaatttttt-cttccaactttaccctc 11785189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 10494827 - 10494760
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtct-ttttcttataaagtaagggcagtttggtaaa 197  Q
    ||||| ||||||||||||||||||| || ||||||| ||||||||||||||||||| ||||| |||||    
T  10494827 tctcatacaattttcaatgcaacttaaagtttgtcttttttcttataaagtaagggtagtttagtaaa 10494760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 4132008 - 4131903
Alignment:
Q  133 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttct 232  Q
    |||||||||||||||||||| || | ||||   ||||||||||||| ||| || ||||| |||||| ||||||||  ||||||||||| |||  ||||||    
T  4132008 tcacacaattttcaatgcaatttaagtttt---tttttcttataaaataaaggtagtttagtaaaaatgttatatataatgattatttaattttatttct 4131912  T
Q  233 taatctgtg 241  Q
    |||| ||||    
T  4131911 taatatgtg 4131903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 121
Target Start/End: Original strand, 30627044 - 30627157
Alignment:
Q  9 tatactcat-ctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttcct 106  Q
    ||||||||| |||||||| ||||||||||||||||| |       ||||||||||||| ||||||| |||| |||| ||||| |||||||||||||| ||    
T  30627044 tatactcattctgtttcataatgagtgtcactttag-ctaaaaaatttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttttct 30627142  T
Q  107 tccaactttaccctc 121  Q
      |||||||||||||    
T  30627143 ctcaactttaccctc 30627157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 34439567 - 34439503
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||| ||| ||||||||||||||    
T  34439567 ttgtttcaaaatgaatgtcattttacatttccaatacaactttcattcttt-cttccaactttacc 34439503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 4132129 - 4132061
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||| ||||||||||||| |||||||||  |||| |||||||||||||| ||| |||||||||||||    
T  4132129 ttgttttaaaatgaatgtcactttacatttttaatacaactttaatttttttctttcaactttaccctc 4132061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 26189506 - 26189651
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc----acaca 139  Q
    ||||||||||||||||||  ||| |||||||||||  ||||||||| |||| |||||||||||||||||          |||  |||||||    |||||    
T  26189506 ttgtttcaaaatgaatgttgttttacatttccaatgcaactttaatatttttcttccaactttaccctcaataaatactccaatttttctctcacacaca 26189605  T
Q  140 attttcaatgcaactttaattttg-tctttttcttataaagtaagg 184  Q
    ||||||||||||||||||| |||| | |||||||||||||||||||    
T  26189606 attttcaatgcaactttaagtttgttttttttcttataaagtaagg 26189651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 10494916 - 10494850
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccc 119  Q
    |||||| ||||||||||||| ||||||||||||||  |||||||||||||| ||| ||||||| |||    
T  10494916 ttgttttaaaatgaatgtcagtttacatttccaattcaactttaatttttttctttcaactttgccc 10494850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 118
Target Start/End: Original strand, 6140598 - 6140662
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||| ||||||||||||  ||||||||||||||  |||||||||||||| ||||||||||||||    
T  6140598 ttgttttaaaatgaatgtcgctttacatttccaattcaactttaatttttt-cttccaactttacc 6140662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 25932718 - 25932771
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||| |||||||| |||||||| ||  ||||||||||||    
T  25932718 tctcacacaattttcaatgtaactttaagtttgtcttgttgctataaagtaagg 25932771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 184
Target Start/End: Original strand, 6992508 - 6992543
Alignment:
Q  149 gcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||| |||||||||||||||||||||||||    
T  6992508 gcaactttaagtttgtctttttcttataaagtaagg 6992543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 224
Target Start/End: Original strand, 30627184 - 30627262
Alignment:
Q  137 acaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |||||||||||||||||||||| ||||| ||||||||         || || ||| |||||||||||||||| |||||||||||||||    
T  30627184 acaattttcaatgcaactttaaatttgtttttttctt---------ggacactttagtaaaagtgttatatctaatgattatttcatt 30627262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 103
Target Start/End: Original strand, 3015919 - 3015964
Alignment:
Q  59 tcaaaatgaatgtca-tttacatttccaatataactttaatttttt 103  Q
    ||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  3015919 tcaaaatgaatgtcactttacattttcaatacaactttaatttttt 3015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 234
Target Start/End: Complemental strand, 19689858 - 19689809
Alignment:
Q  185 gcagtttggtaaaagtgttatatccaatgattatttcattcaatttctta 234  Q
    ||||||| |||||| ||||||||| ||| |||||||||||| ||||||||    
T  19689858 gcagtttagtaaaattgttatatctaataattatttcattccatttctta 19689809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 4123918 - 4123815
Alignment:
Q  133 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgatt-atttcattcaatttc 231  Q
    |||||||||||||||||||| ||||| ||||| |||| |||||||| |||||  |||||  ||||| | |||| |  ||||||| |||| |||| |||||    
T  4123918 tcacacaattttcaatgcaa-tttaagtttgttttttccttataaaataaggatagtttaataaaattattatgtgtaatgattaatttaattctatttc 4123820  T
Q  232 ttaat 236  Q
    |||||    
T  4123819 ttaat 4123815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 8052343 - 8052410
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||| ||||||||||||| |||| ||||| |||| |||||||||||||| || |||| |||||||||    
T  8052343 ttgttttaaaatgaatgtcactttatatttctaatacaactttaatttttt-ctcccaattttaccctc 8052410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 2e-45; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 7612496 - 7612694
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctc--acacaat 141  Q
    |||||| ||||||||||||| ||||||||| ||||| ||| |||| ||||  ||||||||||||||||         | ||| ||||||||  |||||||    
T  7612496 ttgttttaaaatgaatgtcactttacattttcaatacaacattaagttttctcttccaactttaccctaaataaatactccaacttttctctcacacaat 7612595  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||| |||||||||||||||    
T  7612596 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttagt-aaagcgttatatccaatgattatttcattctatttcttaatctgtg 7612694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 38329218 - 38329010
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    ||||||||||||||||||||||||||       ||||||| ||||||||||||| |||| |||| ||||| |||||||||||||| ||| ||||||||||    
T  38329218 gtttcaaaatgagtgtcactttagtcaaaaaaatttgttttaaaatgaatgtcactttatattttcaatacaactttaatttttttctttcaactttacc 38329119  T
Q  119 ctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattat 218  Q
    |||             |||||||||||||||||||||||| ||||||||||  ||||||||||| |||||||| ||||||||||||| || |||||||||    
T  38329118 ctc-------------acacaattttcaatgcaactttaagtttgtcttttgattataaagtaa-ggcagtttagtaaaagtgttatgtctaatgattat 38329033  T
Q  219 ttcattcaatttcttaatctgtg 241  Q
    ||||||| ||| |||||||||||    
T  38329032 ttcattccattccttaatctgtg 38329010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 241
Target Start/End: Complemental strand, 45187476 - 45187251
Alignment:
Q  17 tctgtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaacttt 115  Q
    ||||||||||||| ||| ||||||||| |       ||||||||||||| ||||||| |||| |||| ||||| |||||||||||||| |||  ||| ||    
T  45187476 tctgtttcaaaataagtctcactttagccaaaaatatttgtttcaaaataaatgtcactttatattttcaatacaactttaatttttttcttttaacatt 45187377  T
Q  116 accctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgat 215  Q
    | |||| | | |||||||| |||||||||||| |||||||||| |||||||||||||||||||  |||| |||||| |||||||||| || || ||||||    
T  45187376 atcctctctaacttttctctcacaattttcaaagcaactttaagtttgtctttttcttataaaacaaggacagtttagtaaaagtgtcatgtctaatgat 45187277  T
Q  216 tatttcattcaatttcttaatctgtg 241  Q
    |||||||||  ||| |||||||||||    
T  45187276 tatttcattatattccttaatctgtg 45187251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 1774248 - 1774085
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||| ||||||||||||||||||| |        |||||| ||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||     
T  1774248 gttttaaaatgagtgtcactttagccaaaaaaaattgttttaaaatgaatgtcaatttacattttcaatacaactttaatttttttcttccaactttacg 1774149  T
Q  119 ctccccatcttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa 182  Q
    ||| | | ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  1774148 ctctctaacttttctcttacaattttcaatgcaactttaattttgtctttttcttataaagtaa 1774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 53 - 241
Target Start/End: Complemental strand, 27109976 - 27109775
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaa 140  Q
    ||||||||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||||||||          | | ||||||||  ||||||    
T  27109976 tttgtttcaaaatgaatgtcactttccatttccaatacaactttaatttttttcttccaactttaccctcaataaatactctaacttttctctcacacaa 27109877  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagt-aagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctg 239  Q
    ||| |||||||||||||| |||||| |||||||||||||| || | || ||| |||||||||||||||| |||||||||||||||| |||||||||| ||    
T  27109876 tttccaatgcaactttaagtttgtccttttcttataaagtaaaagacaatttagtaaaagtgttatatctaatgattatttcattctatttcttaatatg 27109777  T
Q  240 tg 241  Q
    ||    
T  27109776 tg 27109775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 22601100 - 22601315
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    ||||||| |||||||||||||||| |       ||||||||||||||||||||| ||||||||||||||| |||||||||| |||| |||||||||||||    
T  22601100 gtttcaagatgagtgtcactttagccaaaaagttttgtttcaaaatgaatgtcactttacatttccaatacaactttaattgtttc-ttccaactttacc 22601198  T
Q  119 ctc----------cccatcttt-tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 207  Q
    |||          || | |||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||| | || ||| ||||||| ||||| |    
T  22601199 ctcgataaatactccaacctttctctcacagaattttcaatgcaactttaagtttgtctttttcttataaagtaaagacaatttagtaaaagagttatgt 22601298  T
Q  208 ccaatgattatttcatt 224  Q
    | |||||||||||||||    
T  22601299 ctaatgattatttcatt 22601315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 132 - 238
Target Start/End: Original strand, 2067788 - 2067894
Alignment:
Q  132 ctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttc 231  Q
    ||||||||||||| |||||||||||||||| ||||||| |||||||||||||||||||||  |||||| |||||||| |||||||||||||||| |||||    
T  2067788 ctcacacaatttttaatgcaactttaatttggtcttttccttataaagtaagggcagtttaataaaagcgttatatcaaatgattatttcattccatttc 2067887  T
Q  232 ttaatct 238  Q
    |||||||    
T  2067888 ttaatct 2067894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 54 - 241
Target Start/End: Original strand, 9022393 - 9022593
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatctttt--ctcacacaat 141  Q
    |||||| ||||||||||||| ||||| ||||||||| |||||||||||||| |||||||||||||||||          ||| |||||  ||||||||||    
T  9022393 ttgttttaaaatgaatgtcactttacgtttccaatacaactttaatttttttcttccaactttaccctcaataaatactccaacttttttctcacacaat 9022492  T
Q  142 tttcaatgcaacttt-aattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    ||||||||||||||| || |||||||||||| ||||||  ||| ||||||| ||||||||||||| || |||||||| ||||||| |||| |||||||||    
T  9022493 tttcaatgcaacttttaagtttgtctttttcatataaaacaagtgcagtttagtaaaagtgttatgtctaatgattaattcattccattttttaatctgt 9022592  T
Q  241 g 241  Q
    |    
T  9022593 g 9022593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 29931419 - 29931224
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||| |        |||||| ||||| ||| ||| ||||||||||||||| |||||||||||||| |||| ||||||||     
T  29931419 gtttcaaaatgagtgtcactttag-caaaaaaaattgttttaaaataaatatcactttacatttccaatacaactttaatttttttcttctaactttact 29931321  T
Q  119 ctccccatcttttctcacaca--attttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatg 213  Q
    ||| | | |||||||| ||||  ||||||||||||||||||||||| ||||| ||||||||| ||| ||||||||  |||||||||||||| |||||    
T  29931320 ctctcaaacttttctctcacataattttcaatgcaactttaattttttctttctcttataaaataaaggcagtttaataaaagtgttatattcaatg 29931224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 32326793 - 32326680
Alignment:
Q  128 ttttctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaa 227  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||  ||||||||||| ||||||||||||  || |||||||||||||||  |    
T  32326793 ttttctcacacaattttcaatgcaactttaaatttgtctttttcatataaaacaagggcagtttagtaaaagtgttacgtctaatgattatttcatttca 32326694  T
Q  228 tttcttaatctgtg 241  Q
    || |||||||||||    
T  32326693 ttccttaatctgtg 32326680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 54 - 240
Target Start/End: Original strand, 36915365 - 36915561
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctcacacaattt 143  Q
    |||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||||||||||||| ||          | |  |||| || ||||||||    
T  36915365 ttgtttcaaaatgaatgtcactttacattttcaatacaactttaatttttttcttccaactttaccttcaataaatattcaacattttttctcacaattt 36915464  T
Q  144 tcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    ||||||||||||||| |||||||||||| ||||||  ||||||| ||| |||||| | |||| || |||||||||||||||| ||| ||||||||||    
T  36915465 tcaatgcaactttaagtttgtctttttcatataaaacaagggcaatttagtaaaaatattatgtctaatgattatttcattccattccttaatctgt 36915561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 6839294 - 6839404
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||| |||||||||||||| ||||  ||||||||||||||||||||||| |||| ||| ||||||||||||| || |||||||||||||||| ||||    
T  6839294 tctcacataattttcaatgcaattttatgtttgtctttttcttataaagtaaaggcaatttagtaaaagtgttatgtctaatgattatttcattccattt 6839393  T
Q  231 cttaatctgtg 241  Q
     ||||||||||    
T  6839394 tttaatctgtg 6839404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 57 - 205
Target Start/End: Original strand, 16208951 - 16209102
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacaca--attttcaatgcaac 153  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||||||| |||  || |||||||||  || |||||||| ||||  ||||||||||||||    
T  16208951 tttcaaaatgaatgtcactttacattttcaatacaactttaatttttttctttaaattttaccctctacaacttttctctcacataattttcaatgcaac 16209050  T
Q  154 tttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    ||||| |||||||||||| |||||| ||||| ||| ||  ||||||||||||    
T  16209051 tttaagtttgtctttttcctataaaataaggacagattaataaaagtgttat 16209102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 11336098 - 11335994
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||      ||| |||||||||||||||| |||| ||| ||||||  ||||    
T  11336098 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaa------tttagtaaaagtgttatatcgaatggttacttcattacattt 11336005  T
Q  231 cttaatctgtg 241  Q
    |||||||||||    
T  11336004 cttaatctgtg 11335994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 59 - 184
Target Start/End: Complemental strand, 34168355 - 34168224
Alignment:
Q  59 tcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcccca-----tcttttctcacacaattttcaatgcaa 152  Q
    ||||||||||||||| ||||||||| ||||| |||||||| ||||| |||||||||||||||||   |     |||| ||||||||||||||||||||||    
T  34168355 tcaaaatgaatgtcactttacattttcaatacaactttaacttttttcttccaactttaccctcaagaaatactcttctctcacacaattttcaatgcaa 34168256  T
Q  153 ctttaattttgtctttttcttataaagtaagg 184  Q
    |||||| |||||||| ||||||||||||||||    
T  34168255 ctttaagtttgtcttgttcttataaagtaagg 34168224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 238
Target Start/End: Original strand, 7129302 - 7129476
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactt 155  Q
    ||||||||||||||||| ||||||||| ||||  |||||||||||||| ||||||||||| |             ||||||||||||| |||||||||||    
T  7129302 tttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttccaacttttc-------------tctcacacaatttccaatgcaactt 7129388  T
Q  156 taattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgat-----tatttcattcaatttcttaatct 238  Q
    |||||||||||| ||||||||||||||   |||||| ||||||| ||||||| |||||||     |||||||||| ||||||||||||    
T  7129389 taattttgtcttattcttataaagtaaaatcagtttagtaaaagcgttatattcaatgattatactatttcattccatttcttaatct 7129476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 207
Target Start/End: Complemental strand, 18666672 - 18666534
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaactt 155  Q
    ||||||||||||||||| ||||||||||||||  ||||||| |||||| ||||||||||| |             |||||||||||||| ||||||||||    
T  18666672 tttcaaaatgaatgtcactttacatttccaatgcaactttagtttttttcttccaacttttc-------------tctcacacaatttttaatgcaactt 18666586  T
Q  156 taattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 207  Q
    || | |||||||||||||||||||||||| |||||| |||||||||||||||    
T  18666585 tagtgttgtctttttcttataaagtaaggacagtttagtaaaagtgttatat 18666534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 224
Target Start/End: Original strand, 30788934 - 30789115
Alignment:
Q  55 tgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttttctcacaca--att 142  Q
    ||||| ||||| ||||||| ||||||| | ||||| |||||||||||||| |||| |||||||||||         | ||| |||||||| ||||  |||    
T  30788934 tgttttaaaataaatgtcactttacatattcaatacaactttaatttttttcttctaactttacccttagtaaatactccaacttttctctcacataatt 30789033  T
Q  143 ttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |||||| ||||||||| ||||||||||||||||||||||||| || |||  |||||||||||| || |||||||||||||||    
T  30789034 ttcaatacaactttaaatttgtctttttcttataaagtaaggacaatttaataaaagtgttatgtctaatgattatttcatt 30789115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 184
Target Start/End: Original strand, 8471279 - 8471399
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    |||||||||||||||||||  ||||||||||||||  |||||||||||||| ||||||||||| | |||           ||||||||||||||||||||    
T  8471279 ttgtttcaaaatgaatgtcgctttacatttccaatgcaactttaatttttttcttccaacttttctctc-----------tcacacaattttcaatgcaa 8471367  T
Q  153 ctttaattttgtctttttcttataaagtaagg 184  Q
    |||||| |||||||||||||||||||||||||    
T  8471368 ctttaagtttgtctttttcttataaagtaagg 8471399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 54 - 173
Target Start/End: Original strand, 156239 - 156358
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttttctcacacaattttcaatgcaa 152  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||  ||| | | || |||| ||||||||||||| |||    
T  156239 ttgtttcaaaatgaatgtcactttacattcccaatataactttaatttttttctcccaactttactttccac-ttttctctcgcacaattttcaatacaa 156337  T
Q  153 ctttaattttgtctttttctt 173  Q
    |||||| |||||| |||||||    
T  156338 ctttaagtttgtccttttctt 156358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 224
Target Start/End: Original strand, 41414847 - 41415012
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatctttt--ctcacacaattttcaatgcaacttta 157  Q
    ||||| ||||||| |||| ||||  ||||| ||||||||||||| ||||||| |||||| ||| || |||||  ||||||||||||||||||||||||||    
T  41414847 aaaataaatgtcactttatatttttaatatcactttaatttttttcttccaattttaccttcctcaacttttttctcacacaattttcaatgcaacttta 41414946  T
Q  158 attttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |  || |  |||| ||||||| ||||||||| || ||||||||||||  || |||||||||||||||    
T  41414947 agcttattatttttttataaaataagggcag-ttagtaaaagtgttacgtctaatgattatttcatt 41415012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 240
Target Start/End: Original strand, 32737861 - 32737961
Alignment:
Q  139 aattttcaatgcaactttaattttgtctttttcttataaagtaa-gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatc 237  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||| |||||||||   |||||||||||||| |||||| |||||||||||||||||||||    
T  32737861 aattttcaatgcaa-tttaagtttttctttttcttataaagtaaagggcagtttaacaaaagtgttatatctaatgat-atttcattcaatttcttaatc 32737958  T
Q  238 tgt 240  Q
    |||    
T  32737959 tgt 32737961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 24732079 - 24732144
Alignment:
Q  175 taaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgt 240  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  24732079 taaagtaggggcagtttagtaaaagtgttatatccaatgactatttcattcaatttcttaatctgt 24732144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 54 - 205
Target Start/End: Complemental strand, 14541900 - 14541737
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttt--tctcacacaat 141  Q
    |||||||||||||||||||| |||||||||| |||| |||||||||||||| |||||||||||| |||         |  || ||||  |||| ||||||    
T  14541900 ttgtttcaaaatgaatgtcactttacatttctaatacaactttaatttttttcttccaactttatccttaataaatacttcaacttttctctctcacaat 14541801  T
Q  142 tttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    ||||||||||||||||| |||||||| ||||||||||||||||  | ||| |||||| ||||||    
T  14541800 tttcaatgcaactttaagtttgtcttgttcttataaagtaaggttattttagtaaaattgttat 14541737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 241
Target Start/End: Original strand, 11257627 - 11257736
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||| ||| || ||||| |||||| |||| | |  ||| |||||||||||| ||||    
T  11257627 tctcacacaattttcaatgcaactttaagtttgtctgtttcttataaaataaaggtagtttagtaaaaatgtt-tttttaataattatttcattccattt 11257725  T
Q  231 cttaatctgtg 241  Q
    |||||| ||||    
T  11257726 cttaatttgtg 11257736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 41790206 - 41790113
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| || | || |||  ||||||| |||| || |||||||||||||||    
T  41790206 tctcacacaattttcaatccaactttaaatttgtctttttcttataaagcaaagacaatttaataaaagtattatgtctaatgattatttcatt 41790113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 2803393 - 2803268
Alignment:
Q  53 tttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttc---cttccaactttaccctccccatcttttctcacacaattttcaat 148  Q
    ||||||||||||| ||||||| ||||||||| ||||| || ||||||||||||   || |||||||||||||||   | || |||  |||||||||||||    
T  2803393 tttgtttcaaaataaatgtcactttacattttcaatacaattttaattttttctccctcccaactttaccctccaacttttctcttgcacaattttcaat 2803294  T
Q  149 gcaactttaattttgtctttttctta 174  Q
     ||||||||| |||||||||||||||    
T  2803293 tcaactttaagtttgtctttttctta 2803268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 183
Target Start/End: Complemental strand, 34461737 - 34461595
Alignment:
Q  56 gtttcaaaatgaatgtca-tttacatttccaatataactttaatt-ttttccttccaactttaccct---------ccccatcttt----tctcacacaa 140  Q
    |||||||||||||||||| ||||||||||||||| |||||||||| |||| ||||||||||||||||         | ||| ||||    ||||||||||    
T  34461737 gtttcaaaatgaatgtcactttacatttccaatacaactttaattttttttcttccaactttaccctcaataaaaactccaacttttctgtctcacacaa 34461638  T
Q  141 ttttcaatgcaactttaattttgtctttttcttataaagtaag 183  Q
    |||||||||||||||||| |||||||| ||| | |||||||||    
T  34461637 ttttcaatgcaactttaagtttgtcttgttcatgtaaagtaag 34461595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 182
Target Start/End: Original strand, 26438980 - 26439102
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttc-cttccaactttaccctccccatcttttctc--acacaattttcaatgcaacttt 156  Q
    |||||||||| || |||||||||||| || ||||||||||||||  |||||||||||| |||| | | ||||||||  ||||||||||||||||||||||    
T  26438980 aaaatgaatgccactttacatttcca-tacaactttaattttttttcttccaactttatcctctcaaacttttctctcacacaattttcaatgcaacttt 26439078  T
Q  157 aattttgtctttttcttataaagtaa 182  Q
    || ||||  ||||| |||||||||||    
T  26439079 aagtttg--tttttgttataaagtaa 26439102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 118
Target Start/End: Complemental strand, 5588628 - 5588563
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||| ||| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||    
T  5588628 ttgttttaaactgaatgtcaatttacatttccaatacaactttaatttttttcttccaactttacc 5588563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 5588517 - 5588426
Alignment:
Q  146 aatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||| |||||||| ||||||||||||||||||| | ||| |||||| |||||| |||||| |  |||||||||||||||  ||||||||||||    
T  5588517 aatgtaactttaagtttgtctttttcttataaattgagg-cagtttagtaaaaatgttatgtttaatgattatttcattatatttcttaatct 5588426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 3095656 - 3095590
Alignment:
Q  56 gtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||| ||||||||||| | ||||||||| ||||| ||||||||||||||||| ||||||||||||||    
T  3095656 gttttaaaatgaatgttactttacattttcaatacaactttaattttttcctcccaactttaccctc 3095590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 184
Target Start/End: Original strand, 27416593 - 27416643
Alignment:
Q  134 cacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||    
T  27416593 cacacaattttcaatgcaattctaagtttgtctttttcttataaagtaagg 27416643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 2812915 - 2812968
Alignment:
Q  183 gggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 236  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||| ||||||    
T  2812915 gggcagtttagtaaaagtgttatgtctaatgattatttcattcaattacttaat 2812968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 173
Target Start/End: Complemental strand, 8382625 - 8382501
Alignment:
Q  61 aaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctc--acacaattttcaat 148  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||| ||  |||||||||||||          ||| ||||||||  ||||||||||||||    
T  8382625 aaaatgaatgtcactttacattttcaatacaactttaatttttttctctcaactttaccctcaatatatactccaacttttctctcacacaattttcaat 8382526  T
Q  149 gcaactttaattttgtctttttctt 173  Q
    |||||| ||| ||||||||||||||    
T  8382525 gcaactataagtttgtctttttctt 8382501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 13109076 - 13109129
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||    
T  13109076 tctcacacaatttttaatgcaaatttaaatttgtctttttcttataaaataagg 13109129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 224
Target Start/End: Original strand, 39970412 - 39970496
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcatt 224  Q
    |||| ||||||||||||||||||||||| ||||||||||||||         ||||||||| ||||||||| ||| || |||||||||||||||    
T  39970412 tctcgcacaattttcaatgcaactttaagtttgtctttttctt---------gggcagtttagtaaaagtggtatgtctaatgattatttcatt 39970496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 205
Target Start/End: Complemental strand, 5044290 - 5044218
Alignment:
Q  133 tcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttat 205  Q
    |||||||||||| ||| ||||||||| ||||| ||||| |||||||||||| |||||||  ||||||| ||||    
T  5044290 tcacacaatttttaatacaactttaaatttgtattttttttataaagtaagagcagtttaataaaagtattat 5044218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 137 - 237
Target Start/End: Complemental strand, 42710048 - 42709949
Alignment:
Q  137 acaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaat 236  Q
    ||||||||||| |||||||||||||| ||||||| | |||||||||||  ||||| ||  |||||| || || |||||| |||| ||| |||||||||||    
T  42710048 acaattttcaacgcaactttaattttatctttttttaataaagtaaggatagtttagt-caagtgtcatgtctaatgataattttatttaatttcttaat 42709950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 64 - 174
Target Start/End: Complemental strand, 8107304 - 8107191
Alignment:
Q  64 atgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctccccatcttt--tctcacacaattttcaatgcaactttaatt 160  Q
    |||||||||| ||||||||| ||||| ||||||||||||||  ||  || ||||  ||| ||| ||||  ||||| ||||||||||||  |||||||| |    
T  8107304 atgaatgtcactttacattttcaatacaactttaatttttttttttaaattttattctctccaacttttctctcagacaattttcaatagaactttaaat 8107205  T
Q  161 ttgtctttttctta 174  Q
    ||||||||||||||    
T  8107204 ttgtctttttctta 8107191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 121
Target Start/End: Original strand, 27416502 - 27416565
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||||||||||||| ||||||||||||||| ||||||| |||||  | |||||||||||||||    
T  27416502 tttcaaaatgaatgtcactttacatttccaatacaactttagttttt--cgtccaactttaccctc 27416565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 118
Target Start/End: Original strand, 33870755 - 33870817
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||| |||||| |||| |||| ||||| |||||||||||||| ||||||||||||||    
T  33870755 tttcaaaatggatgtcactttatattttcaatacaactttaatttttttcttccaactttacc 33870817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 115
Target Start/End: Original strand, 35052469 - 35052531
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaacttt 115  Q
    |||||| |||||||||||| ||| |||||||||||| |||||||||||||| ||| |||||||    
T  35052469 ttgttttaaaatgaatgtcgttttacatttccaatacaactttaatttttttctttcaacttt 35052531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 2067725 - 2067770
Alignment:
Q  58 ttcaaaatgaatgtcatttacatttccaatataactttaatttttt 103  Q
    ||||||||||||||||||||||||| ||||| || |||||||||||    
T  2067725 ttcaaaatgaatgtcatttacattttcaatacaattttaatttttt 2067770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 39970323 - 39970390
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||||||||||||||| | ||||||||||||||| ||| ||| |||||| || ||||||||||||||    
T  39970323 ttgtttcaaaatgaatgttactttacatttccaatacaacattagtttttt-ctcccaactttaccctc 39970390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 42946120 - 42946188
Alignment:
Q  54 ttgtttcaaaatgaatgtcattt-acatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||| |||||||||||||||| ||||||  |||| |||||||||||||| ||| ||| |||||||||    
T  42946120 ttgttttaaaatgaatgtcattttacatttttaatacaactttaatttttttctttcaattttaccctc 42946188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 32061468 - 32061414
Alignment:
Q  187 agtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    ||||| ||||||||||||| ||  ||||||||||| |||||||||||||| ||||    
T  32061468 agtttagtaaaagtgttatgtctgatgattatttcgttcaatttcttaatatgtg 32061414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 169
Target Start/End: Original strand, 32661392 - 32661430
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttt 169  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  32661392 tctcacacaattttcaatacaactttaagtttgtctttt 32661430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 3095525 - 3095468
Alignment:
Q  184 ggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||| |||||||||| ||||  |||||||||||||||| |||| ||||| ||||    
T  3095525 ggcagtttagtaaaagtgtcatatttaatgattatttcattctattttttaatttgtg 3095468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 13108989 - 13109045
Alignment:
Q  57 tttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaact 113  Q
    ||||||||||||||||| ||||||||| ||||  |||||||||||||| |||||||||    
T  13108989 tttcaaaatgaatgtcattttacattttcaatgcaactttaatttttt-cttccaact 13109045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 76 - 121
Target Start/End: Original strand, 32661326 - 32661371
Alignment:
Q  76 tacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    ||||||| ||||| |||||||||||||| || ||||||||||||||    
T  32661326 tacattttcaatacaactttaatttttttctcccaactttaccctc 32661371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 11257540 - 11257601
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaacttta 116  Q
    |||||| ||||||||||||| |||||||||  |||| |||||||||||||  ||||||||||||    
T  11257540 ttgttttaaaatgaatgtcactttacatttttaatacaactttaattttt--cttccaacttta 11257601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 59 - 238
Target Start/End: Original strand, 1546 - 1737
Alignment:
Q  59 tcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctcc---------ccatcttttctcacaca--attttca 146  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||  | |||||||||| ||||          ||| |||||||| ||||  |||||||    
T  1546 tcaaaatgaatgtcactttatatttccaatacaactttaatttttgtcatccaactttatcctcaataaaatctccaacttttctctcacataattttca 1645  T
Q  147 atgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||| |||||||||||  ||||||||||||    
T  1646 atgcaactttaattttgtctttttcttataaagtaagggcaatttagtaaaaacgttatatccaataattatttcattatatttcttaatct 1737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 1689 - 1768
Alignment:
Q  159 ttttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||  ||||||||||||    
T  1689 ttttgtctttttcttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaatct 1768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 9428 - 9507
Alignment:
Q  159 ttttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatct 238  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||  ||||||||||||    
T  9428 ttttgtctttttcttataaagtaaggtcagtttagtaaaaatgttatatccaatgattatttcatttcatttcttaatct 9507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 16104 - 15995
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaattt 230  Q
    |||||||||||||||||||||||||||| |||||| |||| ||||||||||| || ||||| |||||| ||||||||  ||||||||||||||| |||||    
T  16104 tctcacacaattttcaatgcaactttaagtttgtcatttt-ttataaagtaaaggtagtttagtaaaaatgttatatataatgattatttcatttaattt 16006  T
Q  231 cttaatctgtg 241  Q
     ||||| ||||    
T  16005 tttaatatgtg 15995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 54 - 184
Target Start/End: Complemental strand, 70609 - 70465
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccct---------ccccatcttt----tctcacaca 139  Q
    |||||||||||||||||||| ||||||||| ||||  |||||||||||||| ||||||||||||||||         | ||| ||||    |||||||||    
T  70609 ttgtttcaaaatgaatgtcactttacattttcaatgcaactttaatttttttcttccaactttaccctcaataaatactccaacttttctctctcacaca 70510  T
Q  140 attttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||||    
T  70509 attttcaatacaactttaagtttgtatttttcttataaagtaagg 70465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 172 - 241
Target Start/End: Original strand, 8277 - 8346
Alignment:
Q  172 ttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatttcttaatctgtg 241  Q
    |||||||| ||||||||||| |||||||  |||||||||||||||||||||||| |||| ||||||||||    
T  8277 ttataaagcaagggcagtttagtaaaagccttatatccaatgattatttcattccattttttaatctgtg 8346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 116
Target Start/End: Original strand, 8156 - 8221
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaa--ttttttccttccaacttta 116  Q
    |||||||||||||||||||| ||||||||| ||||| ||||||||  |||||| ||| ||||||||    
T  8156 ttgtttcaaaatgaatgtcaatttacattttcaatacaactttaatttttttttctttcaacttta 8221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 321724 - 321792
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||| ||||||||||||  ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  321724 ttgttttaaaatgaatgtcgctttacatttccaatacaactttaatttttttcttccaactttaccctc 321792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 321815 - 321868
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtctttttcttataaagtaagg 184  Q
    |||||||||||||||||||||| ||||| |||||||| ||| ||||||||||||    
T  321815 tctcacacaattttcaatgcaattttaagtttgtcttgttcctataaagtaagg 321868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 131 - 241
Target Start/End: Complemental strand, 4174 - 4063
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgtc-tttttcttataaagtaagggcagtttggtaaaagtgttatatccaatgattatttcattcaatt 229  Q
    ||||||| ||||||||||  |||||||| |||||| ||||| ||||||||||||| || ||| |||||| |||||| |  ||||||| |||||||| |||    
T  4174 tctcacataattttcaatcaaactttaagtttgtcattttttttataaagtaaggacaatttcgtaaaaatgttatgtataatgattgtttcattccatt 4075  T
Q  230 tcttaatctgtg 241  Q
    ||||||| ||||    
T  4074 tcttaatatgtg 4063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 121
Target Start/End: Complemental strand, 4263 - 4195
Alignment:
Q  54 ttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttaccctc 121  Q
    |||||| ||||| ||||| | |||||||||| |||| || ||||||||||| |||||||||||| ||||    
T  4263 ttgttttaaaataaatgttactttacatttctaatacaattttaatttttttcttccaactttatcctc 4195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 241
Target Start/End: Complemental strand, 13247 - 13023
Alignment:
Q  20 gtttcaaaatgagtgtcactttagtcnnnnnnntttgtttcaaaatgaatgtca-tttacatttccaatataactttaattttttccttccaactttacc 118  Q
    |||||||||||||||||||||||  |        |||||| |||||||| |||| ||||||||||||||| || ||||||||||| || |||||||||||    
T  13247 gtttcaaaatgagtgtcactttaaccaaaaaaaattgttttaaaatgaacgtcactttacatttccaatacaattttaatttttttctcccaactttacc 13148  T
Q  119 ct---------ccccatcttttctc--acacaattttcaatgcaactttaattttgtctttttcttataaagtaagggcagtttggtaaaagtgttatat 207  Q
    ||         |  || ||||||||   |||||||||||||| ||||||||||||||||||||||||          ||| ||| ||||||||||||| |    
T  13147 ctcaataaatacttcaacttttctccggcacaattttcaatgtaactttaattttgtctttttctta---------agcattttagtaaaagtgttatgt 13057  T
Q  208 ccaatgattatttcattcaatttcttaatctgtg 241  Q
    | |||||||||||||||  ||| |||||||||||    
T  13056 ctaatgattatttcatttcattccttaatctgtg 13023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 158195 - 158229
Alignment:
Q  139 aattttcaatgcaactttaattttgtctttttctt 173  Q
    |||||||||||||||||||| ||||||||||||||    
T  158195 aattttcaatgcaactttaagtttgtctttttctt 158229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 7765 - 7732
Alignment:
Q  131 tctcacacaattttcaatgcaactttaattttgt 164  Q
    |||||||||||||||||||||||||||| |||||    
T  7765 tctcacacaattttcaatgcaactttaagtttgt 7732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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