View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4458_low_55 (Length: 229)
Name: NF4458_low_55
Description: NF4458
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4458_low_55 |
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Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 14 - 212
Target Start/End: Complemental strand, 52732870 - 52732672
Alignment:
| Q |
14 |
gaggaggagtgaaacgaatgataacaagaggaggaggtgtgtgtgagtgaagattctctcgtgcacacaaaatcttaattttagctgtcagctttgtgta |
113 |
Q |
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| T |
52732870 |
gaggaggagtgaaacgaatgataacaagaggaggaggtgtgtgtgagtgaagattctctcgtgcacacaaaatcttaattttagctgtcagctttgtgta |
52732771 |
T |
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| Q |
114 |
cttgtttatttattcgtggaaacgcaattaagactccaactggcttggtctgggtggtatccgaccggttcatgcaggccgggtctgacccacaaactt |
212 |
Q |
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| T |
52732770 |
cttatttatttattcgtggaaacgcaattaagactccaactggcttggtctgggtggtatccgaccggttcatgcaggccgggtctgacccacaaactt |
52732672 |
T |
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