View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4459-Insertion-6 (Length: 421)
Name: NF4459-Insertion-6
Description: NF4459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4459-Insertion-6 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 402; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 402; E-Value: 0
Query Start/End: Original strand, 8 - 421
Target Start/End: Original strand, 53249790 - 53250203
Alignment:
| Q |
8 |
catggttgatctgcttgatcgtcagcggaagcaaagtttgactttcgcgattctgaaaaagcaaataataaaccctaaaccacatcaattacatgaaaat |
107 |
Q |
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| T |
53249790 |
catggttgatctgcttgatcgtcagcggaagcaaagtttgactttcgcgattctgaaaaagcaaataataaaccctaaaccacatcaattacatgaaaat |
53249889 |
T |
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| Q |
108 |
caaatcaaaaccctaaatcctaaacctagcgtgtctaattgaagttgcggttaagattattaagaagaaaatggagagtgagaactgagaagaaccttgg |
207 |
Q |
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| T |
53249890 |
caaatcaaaaccctaaatcctaaacctagcgtgtctaattgaagttgcggttaagattattaagaagaaaatggagagtgagaactgagaagaaccttgg |
53249989 |
T |
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| Q |
208 |
agggagtgagagaggattcaccgccttgattgctctgagaaggcatgaaaccgccgccggcgaaggcggcgttgccgtcgaactgattcgcatgcatggt |
307 |
Q |
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| T |
53249990 |
agggagtgagagaggattcaccgccttgattggtctgagaaggcatgaaaccgccgccggcgaaggcggcgttgccgtcgaactgattcgcatgcatggt |
53250089 |
T |
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| Q |
308 |
gccgattttccgcgattgaaatgaagtgattgaacagaagtttcgaatttcacaattcgctgtgtcgatatttaatatctaaataattggtttcccgcca |
407 |
Q |
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| T |
53250090 |
gccgattttccgcgattgaaatgaagtgattgaacagaaatttcgaatttcacatttcgctgtgtcgatatttaatatctaaataattggtttcccgcca |
53250189 |
T |
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| Q |
408 |
tttttcttccctaa |
421 |
Q |
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| T |
53250190 |
tttttcttccctaa |
53250203 |
T |
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