View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4459-Insertion-7 (Length: 354)

Name: NF4459-Insertion-7
Description: NF4459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4459-Insertion-7
NF4459-Insertion-7
[»] chr3 (38 HSPs)
chr3 (175-354)||(19139135-19139314)
chr3 (8-91)||(19139399-19139482)
chr3 (8-63)||(48531288-48531342)
chr3 (9-63)||(48022310-48022364)
chr3 (9-58)||(1743991-1744040)
chr3 (8-57)||(16663238-16663287)
chr3 (8-57)||(27185487-27185536)
chr3 (8-57)||(38034811-38034860)
chr3 (8-57)||(45431958-45432007)
chr3 (7-63)||(552183-552239)
chr3 (7-63)||(1111837-1111893)
chr3 (7-63)||(7464487-7464543)
chr3 (7-55)||(7738678-7738726)
chr3 (7-63)||(10922304-10922360)
chr3 (8-56)||(10926479-10926527)
chr3 (18-58)||(21567688-21567728)
chr3 (8-56)||(48315027-48315075)
chr3 (8-60)||(50037321-50037373)
chr3 (7-63)||(52337342-52337398)
chr3 (7-58)||(2078249-2078300)
chr3 (8-63)||(17755131-17755186)
chr3 (8-63)||(19056451-19056506)
chr3 (8-63)||(34899107-34899162)
chr3 (7-57)||(8127472-8127522)
chr3 (7-57)||(38130961-38131011)
chr3 (20-62)||(42276395-42276437)
chr3 (11-61)||(47536478-47536528)
chr3 (8-57)||(25340926-25340975)
chr3 (8-57)||(29631196-29631245)
chr3 (7-56)||(35126272-35126321)
chr3 (8-57)||(35863815-35863864)
chr3 (12-57)||(39779038-39779083)
chr3 (7-64)||(48517680-48517737)
chr3 (8-53)||(52119386-52119431)
chr3 (9-57)||(759596-759644)
chr3 (7-63)||(2186423-2186479)
chr3 (34-62)||(26941736-26941764)
chr3 (8-56)||(47099038-47099086)
[»] chr5 (29 HSPs)
chr5 (7-63)||(38495151-38495207)
chr5 (7-63)||(20721059-20721115)
chr5 (8-63)||(2839808-2839863)
chr5 (8-63)||(37054265-37054320)
chr5 (9-63)||(27903124-27903178)
chr5 (8-57)||(18789046-18789095)
chr5 (7-63)||(11637568-11637624)
chr5 (7-63)||(13864353-13864409)
chr5 (8-44)||(20211290-20211326)
chr5 (8-56)||(27679508-27679556)
chr5 (7-63)||(40837899-40837955)
chr5 (9-60)||(5591271-5591321)
chr5 (8-63)||(17210705-17210760)
chr5 (8-63)||(34987147-34987202)
chr5 (8-63)||(39980518-39980573)
chr5 (7-57)||(866029-866079)
chr5 (7-61)||(10032272-10032326)
chr5 (8-58)||(10704332-10704382)
chr5 (8-62)||(10705969-10706023)
chr5 (7-57)||(11720903-11720952)
chr5 (8-62)||(19068437-19068490)
chr5 (7-61)||(35131124-35131178)
chr5 (8-57)||(6489017-6489066)
chr5 (7-63)||(29904429-29904486)
chr5 (8-57)||(34191443-34191492)
chr5 (8-57)||(34436861-34436910)
chr5 (8-48)||(1808604-1808644)
chr5 (8-44)||(11017186-11017222)
chr5 (8-56)||(17861989-17862037)
[»] chr2 (33 HSPs)
chr2 (7-63)||(5168575-5168631)
chr2 (7-64)||(34376895-34376952)
chr2 (7-63)||(31815883-31815939)
chr2 (7-69)||(26400760-26400822)
chr2 (7-57)||(43067675-43067725)
chr2 (8-57)||(20565077-20565126)
chr2 (7-56)||(28874555-28874604)
chr2 (8-56)||(20120724-20120772)
chr2 (8-56)||(22523015-22523063)
chr2 (8-56)||(31476981-31477029)
chr2 (8-63)||(29599949-29600004)
chr2 (13-63)||(4180712-4180762)
chr2 (29-63)||(18290683-18290717)
chr2 (7-53)||(27152362-27152408)
chr2 (13-63)||(36264475-36264525)
chr2 (8-53)||(9842208-9842253)
chr2 (8-53)||(10156027-10156072)
chr2 (8-57)||(10735833-10735882)
chr2 (8-57)||(11560508-11560557)
chr2 (8-57)||(24592848-24592897)
chr2 (8-57)||(29544637-29544686)
chr2 (8-57)||(30089059-30089108)
chr2 (8-57)||(30125663-30125712)
chr2 (8-57)||(30243260-30243309)
chr2 (8-57)||(31543022-31543071)
chr2 (8-57)||(35820303-35820352)
chr2 (8-61)||(36474772-36474825)
chr2 (8-48)||(3197090-3197130)
chr2 (7-63)||(9064585-9064641)
chr2 (7-63)||(9547405-9547461)
chr2 (7-63)||(13100260-13100316)
chr2 (7-63)||(19159950-19160006)
chr2 (11-63)||(41939104-41939156)
[»] chr1 (37 HSPs)
chr1 (9-63)||(27533254-27533308)
chr1 (8-57)||(41763157-41763206)
chr1 (8-63)||(8269364-8269419)
chr1 (7-61)||(17669654-17669708)
chr1 (7-56)||(51067897-51067946)
chr1 (7-63)||(12212304-12212360)
chr1 (8-56)||(19620586-19620634)
chr1 (11-63)||(34899622-34899674)
chr1 (11-63)||(39387787-39387839)
chr1 (8-56)||(52043283-52043331)
chr1 (8-63)||(17139513-17139568)
chr1 (8-63)||(23203332-23203387)
chr1 (8-63)||(41769811-41769866)
chr1 (8-62)||(5503762-5503816)
chr1 (9-63)||(12268980-12269034)
chr1 (7-61)||(16033448-16033502)
chr1 (7-45)||(19396205-19396243)
chr1 (7-57)||(29800542-29800592)
chr1 (7-53)||(47719113-47719159)
chr1 (12-57)||(13778575-13778620)
chr1 (7-56)||(24978253-24978302)
chr1 (8-57)||(29739347-29739396)
chr1 (8-57)||(34521192-34521241)
chr1 (8-61)||(46012394-46012447)
chr1 (8-57)||(48100732-48100781)
chr1 (7-59)||(1091188-1091240)
chr1 (7-63)||(12852198-12852254)
chr1 (7-63)||(15670638-15670694)
chr1 (8-56)||(22346686-22346734)
chr1 (9-57)||(25532984-25533032)
chr1 (24-60)||(39252145-39252181)
chr1 (9-57)||(41974772-41974820)
chr1 (8-48)||(43426190-43426230)
chr1 (8-64)||(43611434-43611490)
chr1 (9-57)||(45190271-45190319)
chr1 (7-63)||(51046151-51046207)
chr1 (7-63)||(52262162-52262218)
[»] chr7 (28 HSPs)
chr7 (7-60)||(48103673-48103726)
chr7 (8-57)||(16577862-16577911)
chr7 (8-57)||(16587751-16587800)
chr7 (8-61)||(47607908-47607961)
chr7 (7-59)||(5082313-5082365)
chr7 (7-63)||(19599154-19599210)
chr7 (7-63)||(28200381-28200437)
chr7 (7-57)||(3265485-3265535)
chr7 (7-57)||(41237926-41237976)
chr7 (7-61)||(42829232-42829286)
chr7 (7-45)||(44941427-44941465)
chr7 (8-57)||(10244737-10244786)
chr7 (8-57)||(16537538-16537587)
chr7 (8-57)||(16628075-16628124)
chr7 (8-57)||(18714458-18714507)
chr7 (8-57)||(19416524-19416573)
chr7 (7-60)||(23221401-23221454)
chr7 (8-57)||(27462438-27462487)
chr7 (7-56)||(34000271-34000320)
chr7 (7-63)||(7388035-7388091)
chr7 (7-63)||(7994880-7994936)
chr7 (9-53)||(10467122-10467166)
chr7 (7-59)||(22564142-22564194)
chr7 (12-56)||(36033467-36033511)
chr7 (7-63)||(36755024-36755079)
chr7 (7-63)||(36760821-36760876)
chr7 (8-60)||(42753526-42753578)
chr7 (7-63)||(47342430-47342486)
[»] chr6 (22 HSPs)
chr6 (8-61)||(26356079-26356132)
chr6 (8-56)||(14429131-14429179)
chr6 (17-63)||(29680607-29680653)
chr6 (7-56)||(8916477-8916526)
chr6 (8-61)||(10018410-10018462)
chr6 (8-53)||(21847204-21847249)
chr6 (8-61)||(32053798-32053851)
chr6 (8-63)||(788876-788931)
chr6 (7-57)||(8629698-8629748)
chr6 (7-57)||(12735245-12735295)
chr6 (8-58)||(30579869-30579919)
chr6 (8-49)||(5655317-5655358)
chr6 (8-57)||(8639056-8639105)
chr6 (8-57)||(16390439-16390488)
chr6 (8-61)||(16966398-16966451)
chr6 (8-56)||(21029369-21029418)
chr6 (10-55)||(24248177-24248222)
chr6 (8-61)||(28231423-28231476)
chr6 (9-57)||(291378-291426)
chr6 (8-56)||(8211601-8211649)
chr6 (9-57)||(8637439-8637487)
chr6 (11-63)||(12602038-12602089)
[»] chr4 (32 HSPs)
chr4 (8-61)||(32006510-32006563)
chr4 (8-63)||(25115059-25115114)
chr4 (9-63)||(19997360-19997414)
chr4 (7-60)||(17423176-17423229)
chr4 (8-57)||(20799396-20799445)
chr4 (12-61)||(25783447-25783496)
chr4 (8-57)||(28435250-28435299)
chr4 (7-63)||(25783160-25783216)
chr4 (11-63)||(38767030-38767082)
chr4 (7-63)||(41520963-41521019)
chr4 (8-63)||(836231-836286)
chr4 (8-63)||(9946437-9946492)
chr4 (8-63)||(11949759-11949814)
chr4 (8-59)||(22411774-22411825)
chr4 (8-63)||(23619111-23619166)
chr4 (8-63)||(35021463-35021518)
chr4 (7-57)||(23225874-23225924)
chr4 (7-57)||(47490709-47490759)
chr4 (8-57)||(4360646-4360695)
chr4 (8-57)||(7230290-7230339)
chr4 (7-44)||(20096285-20096322)
chr4 (8-57)||(20383498-20383547)
chr4 (8-57)||(22040660-22040709)
chr4 (8-57)||(47814253-47814302)
chr4 (8-57)||(50362141-50362190)
chr4 (9-57)||(1753354-1753402)
chr4 (8-44)||(21052572-21052608)
chr4 (7-63)||(21318249-21318305)
chr4 (9-57)||(39489617-39489665)
chr4 (7-63)||(42845034-42845090)
chr4 (8-44)||(50442762-50442798)
chr4 (9-57)||(50668351-50668399)
[»] scaffold0021 (1 HSPs)
scaffold0021 (7-63)||(161150-161206)
[»] chr8 (26 HSPs)
chr8 (7-63)||(26799193-26799249)
chr8 (9-61)||(37141368-37141420)
chr8 (9-63)||(12800896-12800950)
chr8 (9-63)||(33996080-33996134)
chr8 (8-57)||(8717477-8717526)
chr8 (7-56)||(10982735-10982784)
chr8 (8-56)||(12714373-12714421)
chr8 (8-58)||(5179803-5179853)
chr8 (7-61)||(7553688-7553742)
chr8 (8-69)||(18942928-18942990)
chr8 (7-57)||(18959158-18959208)
chr8 (28-62)||(22504287-22504321)
chr8 (24-62)||(24195275-24195313)
chr8 (7-61)||(29716698-29716752)
chr8 (11-65)||(32192907-32192961)
chr8 (7-57)||(32421578-32421628)
chr8 (9-63)||(35700391-35700445)
chr8 (13-63)||(38826478-38826528)
chr8 (7-57)||(45049584-45049634)
chr8 (7-63)||(36310085-36310142)
chr8 (22-63)||(39138994-39139035)
chr8 (8-57)||(39821894-39821943)
chr8 (11-64)||(40482352-40482405)
chr8 (9-53)||(4830019-4830063)
chr8 (7-59)||(14279571-14279623)
chr8 (8-56)||(28580954-28581002)
[»] scaffold0983 (1 HSPs)
scaffold0983 (8-57)||(3317-3366)
[»] scaffold0016 (1 HSPs)
scaffold0016 (7-64)||(99046-99103)
[»] scaffold0007 (1 HSPs)
scaffold0007 (8-63)||(221009-221064)
[»] scaffold0071 (1 HSPs)
scaffold0071 (9-63)||(53436-53490)
[»] scaffold1160 (1 HSPs)
scaffold1160 (7-52)||(1719-1764)
[»] scaffold1149 (1 HSPs)
scaffold1149 (12-57)||(2346-2391)
[»] scaffold0038 (1 HSPs)
scaffold0038 (8-61)||(31920-31973)
[»] scaffold0050 (1 HSPs)
scaffold0050 (7-63)||(53376-53432)
[»] scaffold0003 (1 HSPs)
scaffold0003 (9-57)||(361250-361298)


Alignment Details
Target: chr3 (Bit Score: 164; Significance: 1e-87; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 175 - 354
Target Start/End: Complemental strand, 19139314 - 19139135
Alignment:
Q  175 gtttcattaccaaattatagaaggtgcaaggagatccataagatttacgtaaaaaccactttaaagataagaacttattattattcacaaatggataaac 274  Q
    |||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19139314 gtttcattaccaaattatagaaggtgcaagaagacccataaggtttacgtaaaaaccactttaaagataagaacttattattattcacaaatggataaac 19139215  T
Q  275 attataagtcaaatgacataaccatctcccactcaaactggttaaaaatcttatgcaacacttaaagcgagatctcacat 354  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19139214 attataagtcaaatgacataaccatctcccactcaaactggttaaaaatcttatgcaacacttaaagtgagatctcacat 19139135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 19139482 - 19139399
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgacacgaccgcttaatctgatctagactctc 91  Q
    ||||||||||||| | ||| ||||||||||| || |||| |||||||||| |||||||||||||||||||||||||||||||||    
T  19139482 ctcagttggtaggaacaatgcataacatatgtaaagttcagggttcaaaccccgacacgaccgcttaatctgatctagactctc 19139399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 48531288 - 48531342
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||| |||||||||||||| ||||||||||||| |||||||||| |||||    
T  48531288 ctcagttggttgggataatacataaaatatgcaaggttc-gggttcaaaccccgac 48531342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 48022364 - 48022310
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| || ||| ||||| |||||||| |||||||||||||||||||||    
T  48022364 tcagttggtagagacaatgcataatatatgcaaagttcggggttcaaactccgac 48022310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 58
Target Start/End: Complemental strand, 1744040 - 1743991
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaact 58  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||| ||||    
T  1744040 tcagttggtatggacaatacataatatatgcaaggttcggggttcgaact 1743991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 16663287 - 16663238
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||||||| ||||| ||||||||||| ||||||||||||    
T  16663287 ctcagttggtatggataatgcataatatatgcaaggtccggggttcaaac 16663238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 27185487 - 27185536
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||||||||| |||||||||||  |||||||||||    
T  27185487 ctcagttggtagggacaatacataatatatgcaaggtctggggttcaaac 27185536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 38034860 - 38034811
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||| |||| ||||||||| ||||||||||| ||||||||||||    
T  38034860 ctcagttggttgggacaatacataaaatatgcaaggtccggggttcaaac 38034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 45431958 - 45432007
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| ||||||||||| ||||||||||||    
T  45431958 ctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaac 45432007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 552183 - 552239
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||||| | ||||| ||||||||||| | |||||||||| |||||    
T  552183 actcagttggtagggatattgcataatatatgcaaggtccagggttcaaaccccgac 552239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 1111893 - 1111837
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||| |||||| ||||||||| |||||||||||  ||||||||||| |||||    
T  1111893 actcagttgatagggacaatacataatatatgcaaggtctggggttcaaaccccgac 1111837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 7464543 - 7464487
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||| ||| ||||| ||||| ||||| |||||||||||| |||||    
T  7464543 actcagttggtagggacaatgcataatatatgtaaggtccggggttcaaaccccgac 7464487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 7738678 - 7738726
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaa 55  Q
    |||||||||||||||| ||| ||||| ||||||||||| ||||||||||    
T  7738678 actcagttggtagggacaatgcataaaatatgcaaggtccggggttcaa 7738726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 10922360 - 10922304
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||| ||| ||||| ||||||||| | |||||||||||| |||||    
T  10922360 actcagttggtagggacaatgcataatatatgcaagatccggggttcaaaccccgac 10922304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 10926479 - 10926527
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||| ||| ||| ||||| |||||||||||||||||||||||    
T  10926479 ctcagttggtaaggacaatgcataatatatgcaaggttcggggttcaaa 10926527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 58
Target Start/End: Complemental strand, 21567728 - 21567688
Alignment:
Q  18 agggataatacataacatatgcaaggttcggggttcaaact 58  Q
    ||||||||||||||| ||||||||||||| |||||||||||    
T  21567728 agggataatacataatatatgcaaggttcagggttcaaact 21567688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 48315075 - 48315027
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  48315075 ctcagttggtaaggataatgcataatatatgcaaggtccggggttcaaa 48315027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 50037321 - 50037373
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactcc 60  Q
    ||||||||||| ||| ||| |||||  ||||||||||||||||||||||||||    
T  50037321 ctcagttggtatggacaatgcataatgtatgcaaggttcggggttcaaactcc 50037373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 52337398 - 52337342
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| || |||||  |||| |||||||||||||||| |||||||||||||    
T  52337398 actcagttggtcggaataatgtataaaatatgcaaggttcgggtttcaaactccgac 52337342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 2078249 - 2078300
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaact 58  Q
    ||||||||||||| || ||| ||||| |||||||||||| ||||||||||||    
T  2078249 actcagttggtagagacaatgcataatatatgcaaggtttggggttcaaact 2078300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 17755131 - 17755186
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||| |||| | ||||||||| ||||| ||||||||||||||||| ||||||    
T  17755131 ctcagttgataggaacaatacataatatatgtaaggttcggggttcaaattccgac 17755186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 19056451 - 19056506
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||| |||| | ||||||||| ||||| ||||||||||||||||| ||||||    
T  19056451 ctcagttgataggaacaatacataatatatgtaaggttcggggttcaaattccgac 19056506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 34899107 - 34899162
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||| ||||||| ||| ||||| ||||||||||| |||||||||||| |||||    
T  34899107 ctcagttcgtagggacaatgcataatatatgcaaggtccggggttcaaaccccgac 34899162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 8127472 - 8127522
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||| ||| ||| ||||| |||||||||||| |||||||||||    
T  8127472 actcagttggtaaggacaatgcataaaatatgcaaggtttggggttcaaac 8127522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 38131011 - 38130961
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  38131011 actcagttggtatggacaatgcataatatatgcaaggtccggggttcaaac 38130961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 62
Target Start/End: Complemental strand, 42276437 - 42276395
Alignment:
Q  20 ggataatacataacatatgcaaggttcggggttcaaactccga 62  Q
    |||||||  |||| |||||||||||||||||||||||||||||    
T  42276437 ggataatgtataaaatatgcaaggttcggggttcaaactccga 42276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 47536528 - 47536478
Alignment:
Q  11 agttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    |||||||||||| ||| ||||| ||||||||||| || |||||||||||||    
T  47536528 agttggtagggacaatgcataaaatatgcaaggtccgaggttcaaactccg 47536478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 25340975 - 25340926
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  25340975 ctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaac 25340926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 29631196 - 29631245
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| |||||||||||||||| |||||||    
T  29631196 ctcagttggtatggacaatgcataatatatgcaaggttcgggattcaaac 29631245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 35126321 - 35126272
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    |||||||||||||||||||| ||||| ||||||||| |  ||||||||||    
T  35126321 actcagttggtagggataatgcataatatatgcaagatctggggttcaaa 35126272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 35863864 - 35863815
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||||||||| |||||||||||  |||||||||||    
T  35863864 ctcagttggtaaggacaatacataatatatgcaaggtctggggttcaaac 35863815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 39779038 - 39779083
Alignment:
Q  12 gttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||| ||| ||| ||||| ||||||||||||||||||||||||    
T  39779038 gttggtatggacaatgcataatatatgcaaggttcggggttcaaac 39779083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 48517680 - 48517737
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgaca 64  Q
    ||||||||| |||| | ||| ||||| |||| |||||||||| |||||||||||||||    
T  48517680 actcagttgataggaacaatgcataatatatacaaggttcggagttcaaactccgaca 48517737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 52119386 - 52119431
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttc 53  Q
    ||||||||||| ||| ||| ||||| ||||||||||||||||||||    
T  52119386 ctcagttggtaaggacaatgcataatatatgcaaggttcggggttc 52119431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 759644 - 759596
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||||| ||| ||||| |||||||| |||| ||||||||||    
T  759644 tcagttggtagggacaatgcataatatatgcaaagttcagggttcaaac 759596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 2186479 - 2186423
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| ||| ||||||||| ||||| |||||  ||||||||||| |||||    
T  2186479 actcagttggtatggacaatacataatatatgtaaggtctggggttcaaaccccgac 2186423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 62
Target Start/End: Original strand, 26941736 - 26941764
Alignment:
Q  34 atatgcaaggttcggggttcaaactccga 62  Q
    |||||||||||||||||||||||||||||    
T  26941736 atatgcaaggttcggggttcaaactccga 26941764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 47099086 - 47099038
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    |||||||| || | ||||| ||||| |||||||||||||||||||||||    
T  47099086 ctcagttgataagaataatgcataatatatgcaaggttcggggttcaaa 47099038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 38495151 - 38495207
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||||||||| |||||    
T  38495151 actcagttggtatggataatgcataaaatatgcaaggttcggggttcaaaccccgac 38495207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 20721059 - 20721115
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| ||| ||||||||| ||||||||||| |||||||||||| |||||    
T  20721059 actcagttggtatggacaatacataatatatgcaaggtccggggttcaaaccccgac 20721115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 2839808 - 2839863
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||  ||||||| ||||| |||| |||||||||||||||||||||||||    
T  2839808 ctcagttggtttggataatgcataatatatccaaggttcggggttcaaactccgac 2839863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 37054320 - 37054265
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||||||| ||| ||||| ||||  ||||||||||||||||||||||||    
T  37054320 ctcagttggtagggacaatgcataatatatataaggttcggggttcaaactccgac 37054265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 27903124 - 27903178
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||| | | ||| ||||| ||||||||||||||||||||||||||||||    
T  27903124 tcagttggtatgaacaatgcataatatatgcaaggttcggggttcaaactccgac 27903178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 18789046 - 18789095
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||| || ||| ||||| ||||||||||||||||||||||||    
T  18789046 ctcagttggtagagacaatgcataaaatatgcaaggttcggggttcaaac 18789095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 11637624 - 11637568
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| ||| ||| ||||| |||||||||||||||||||| ||| |||||    
T  11637624 actcagttggtatggacaatgcataaaatatgcaaggttcggggttcgaaccccgac 11637568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 13864353 - 13864409
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| | | ||||||||| ||||||||||| |||||||||||| |||||    
T  13864353 actcagttggtatgaacaatacataatatatgcaaggtccggggttcaaaccccgac 13864409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 20211290 - 20211326
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggt 44  Q
    ||||||||||||||||||||||||| |||||||||||    
T  20211290 ctcagttggtagggataatacataatatatgcaaggt 20211326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 27679508 - 27679556
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    |||||||||||  |||||| ||||| |||||||||||||||||||||||    
T  27679508 ctcagttggtaaagataatgcataatatatgcaaggttcggggttcaaa 27679556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 40837955 - 40837899
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| ||| |||| |||| ||||||||||| |||||||||||| |||||    
T  40837955 actcagttggtatggacaatatataaaatatgcaaggtccggggttcaaaccccgac 40837899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 5591271 - 5591321
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactcc 60  Q
    ||||||||||| |||||||||||| ||||| ||||||| |||||||||||||    
T  5591271 tcagttggtagagataatacataatatatggaaggttc-gggttcaaactcc 5591321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 17210760 - 17210705
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||||||| | | ||||| |||||||||||  |||||||||||||||||    
T  17210760 ctcagttggtagggacagtgcataatatatgcaaggtgtggggttcaaactccgac 17210705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 34987202 - 34987147
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||  ||||||| ||||| |||| |||||||||||||||||| ||||||    
T  34987202 ctcagttggtgtggataatgcataatatatccaaggttcggggttcaaattccgac 34987147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 39980518 - 39980573
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| ||||||| ||||| ||||||||||| ||| |||||||| |||||    
T  39980518 ctcagttggtatggataatgcataaaatatgcaaggtccggagttcaaaccccgac 39980573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 866079 - 866029
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||| |||||||  |||| ||||||||||| ||||||||||||    
T  866079 actcagttggtatggataatgtataaaatatgcaaggtccggggttcaaac 866029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 10032326 - 10032272
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    |||||||||||| ||| ||| |||||||||||||||||| ||||||  |||||||    
T  10032326 actcagttggtatggacaatgcataacatatgcaaggtttggggtttgaactccg 10032272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Complemental strand, 10704382 - 10704332
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaact 58  Q
    ||||||||||| ||| ||| ||||| ||||||||||| |||||||||||||    
T  10704382 ctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaact 10704332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 10705969 - 10706023
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccga 62  Q
    |||||||||| |||| ||||||||| |||||||||||  ||||||||||| ||||    
T  10705969 ctcagttggttgggacaatacataaaatatgcaaggtctggggttcaaaccccga 10706023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 11720903 - 11720952
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||||||| ||| ||||| |||||||||| |||||||||||||    
T  11720903 actcagttggtagggacaatgcataatatatgcaagg-tcggggttcaaac 11720952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 19068490 - 19068437
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccga 62  Q
    ||||||||||| ||||||| ||||| |||||||||||| ||||||||||| ||||    
T  19068490 ctcagttggtatggataatgcataatatatgcaaggtt-ggggttcaaaccccga 19068437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 35131124 - 35131178
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||| ||  |||||||||||| ||||||||||||||| |||| |||||||    
T  35131124 actcagttgttatcgataatacataaaatatgcaaggttcggagttcgaactccg 35131178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 6489017 - 6489066
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| |||||||||||  |||||||||||    
T  6489017 ctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaac 6489066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 29904429 - 29904486
Alignment:
Q  7 actcagttggt-agggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| | ||| ||||||||| ||||| |||||||| |||||||||||||||    
T  29904429 actcagttggttaaggacaatacataatatatgtaaggttcgaggttcaaactccgac 29904486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 34191443 - 34191492
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||| |||| ||| ||||| ||||||||||| ||||||||||||    
T  34191443 ctcagttggttgggacaatgcataaaatatgcaaggtccggggttcaaac 34191492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 34436861 - 34436910
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| ||||||||||  ||||||||||||    
T  34436861 ctcagttggtagggacaatgcataatatatgcaagggccggggttcaaac 34436910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 1808644 - 1808604
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcgg 48  Q
    ||||||||||| ||||||| ||||| |||||||||||||||    
T  1808644 ctcagttggtatggataatgcataaaatatgcaaggttcgg 1808604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 11017186 - 11017222
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggt 44  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  11017186 ctcagttggtagggataatgcataatatatgcaaggt 11017222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 17861989 - 17862037
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||||||| ||| ||||| |||||||| |||| |||||||||    
T  17861989 ctcagttggtagggacaatgcataatatatgcaaagttcagggttcaaa 17862037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 5168631 - 5168575
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||| |||||    
T  5168631 actcagttgatagggataatgcataatatatgcaaggttcggggttcaaaccccgac 5168575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 34376895 - 34376952
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgaca 64  Q
    |||||||||||| ||||| | ||||| |||||||||||||| ||||||||||||||||    
T  34376895 actcagttggtaaggatattgcataaaatatgcaaggttcgaggttcaaactccgaca 34376952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 31815939 - 31815883
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||| ||| ||||| ||||||||||| |||||||||||| |||||    
T  31815939 actcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgac 31815883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 26400760 - 26400822
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgacacgacc 69  Q
    |||||||||||| ||| ||| ||||| |||||||||||| || |||||||||||| |||||||    
T  26400760 actcagttggtaaggacaatgcataatatatgcaaggttgggtgttcaaactccgccacgacc 26400822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 43067675 - 43067725
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||||| |||||  ||||||||||||| |||||||||||||||    
T  43067675 actcagttggtaggaataatgaataacatatgcaatgttcggggttcaaac 43067725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 20565126 - 20565077
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| ||||||||||| ||||||||||||    
T  20565126 ctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaac 20565077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 28874604 - 28874555
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||| ||||||||  |||| |||||||||||||||||||||||    
T  28874604 actcagttggttgggataatgtataaaatatgcaaggttcggggttcaaa 28874555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 20120772 - 20120724
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||| ||| ||| ||||| |||||||||||||||||||||||    
T  20120772 ctcagttggtaaggacaatgcataatatatgcaaggttcggggttcaaa 20120724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 22523063 - 22523015
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||| ||| ||||||||| |||||||||||||| ||||||||    
T  22523063 ctcagttggtatggacaatacataatatatgcaaggttcgaggttcaaa 22523015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 31476981 - 31477029
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||||||||    
T  31476981 ctcagttggtagggagaatgcataatatatacaaggttcggggttcaaa 31477029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 29599949 - 29600004
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||  ||||||| ||||| |||| |||||| ||||||||||||||||||    
T  29599949 ctcagttggtttggataatgcataatatatccaaggtccggggttcaaactccgac 29600004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 4180712 - 4180762
Alignment:
Q  13 ttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||| |||||||| ||||| ||||||||||| |||||||||||| |||||    
T  4180712 ttggttgggataatgcataaaatatgcaaggtccggggttcaaaccccgac 4180762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 29 - 63
Target Start/End: Original strand, 18290683 - 18290717
Alignment:
Q  29 ataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||| ||||||||||||||||||||||||||||||    
T  18290683 ataatatatgcaaggttcggggttcaaactccgac 18290717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 27152362 - 27152408
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttc 53  Q
    |||||||||||||||||||| ||||| |||||||||||  |||||||    
T  27152362 actcagttggtagggataatgcataatatatgcaaggtctggggttc 27152408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 36264525 - 36264475
Alignment:
Q  13 ttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||| ||||||| ||||| |||||||| ||||||||||||||| |||||    
T  36264525 ttggtatggataatgcataatatatgcaaagttcggggttcaaaccccgac 36264475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 9842253 - 9842208
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttc 53  Q
    ||||||||||||||| ||| ||||| |||||||||||| |||||||    
T  9842253 ctcagttggtagggacaatgcataaaatatgcaaggtttggggttc 9842208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 10156027 - 10156072
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttc 53  Q
    ||||||||||| ||| ||||||||| ||||||||||||||| ||||    
T  10156027 ctcagttggtaaggacaatacataatatatgcaaggttcggtgttc 10156072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 10735882 - 10735833
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||||||  || ||||| ||||||||||| ||||||||||||    
T  10735882 ctcagttggtagggacgatgcataatatatgcaaggtccggggttcaaac 10735833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 11560508 - 11560557
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||| |||||||||| ||| ||||| ||||||||||||| ||||||||||    
T  11560508 ctcaattggtagggacaatgcataatatatgcaaggttcagggttcaaac 11560557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 24592897 - 24592848
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| |||||||||||  |||||||||||    
T  24592897 ctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaac 24592848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 29544637 - 29544686
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||| |||||||||| ||| ||||| ||||||||||| ||||||||||||    
T  29544637 ctcaattggtagggacaatgcataatatatgcaaggtccggggttcaaac 29544686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 30089059 - 30089108
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| |||| |||||| ||||||||||||    
T  30089059 ctcagttggtagggacaatgcataatatatacaaggtccggggttcaaac 30089108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 30125663 - 30125712
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| |||| |||||| ||||||||||||    
T  30125663 ctcagttggtagggacaatgcataatatatacaaggtccggggttcaaac 30125712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 30243260 - 30243309
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||| || ||| ||||| |||| |||||||||||||||||||    
T  30243260 ctcagttggtagagacaatgcataatatatacaaggttcggggttcaaac 30243309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 31543022 - 31543071
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||| ||||| ||||||| ||||| ||||||||||| ||||||||||||    
T  31543022 ctcagatggtatggataatgcataatatatgcaaggtccggggttcaaac 31543071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 35820352 - 35820303
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| | ||||||||| ||||||||||||    
T  35820352 ctcagttggtagggacaatgcataatacatgcaaggtccggggttcaaac 35820303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 36474772 - 36474825
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    |||||||| |||||| ||| ||||| ||||||||||| ||||||||||| ||||    
T  36474772 ctcagttgatagggacaatgcataaaatatgcaaggtccggggttcaaattccg 36474825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 3197130 - 3197090
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcgg 48  Q
    ||||||||||||||| ||| ||||| |||||||||||||||    
T  3197130 ctcagttggtagggacaatgcataatatatgcaaggttcgg 3197090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 9064641 - 9064585
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||| ||| | || | |||||||||||| |||||||||| |||||    
T  9064641 actcagttggtagggacaatgcgtaccttatgcaaggttcagggttcaaaccccgac 9064585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 9547461 - 9547405
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||| || ||| ||| ||||| |||||||||||| ||||||||||| |||||    
T  9547461 actcagttgatatggacaatgcataatatatgcaaggtttggggttcaaaccccgac 9547405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 13100316 - 13100260
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||  ||||||| ||||| |||| |||||| || |||||||||||||||    
T  13100316 actcagttggtttggataatgcataatatatccaaggtccgaggttcaaactccgac 13100260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 19159950 - 19160006
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||| || | | ||| ||||| ||||||||||||||| ||||||||||||||    
T  19159950 actcagttgatatgaacaatgcataatatatgcaaggttcggagttcaaactccgac 19160006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 41939156 - 41939104
Alignment:
Q  11 agttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||| ||||| ||||| |||||| | | |||||||||||||    
T  41939156 agttggtagggataatgcataatatatgtaaggtttgagattcaaactccgac 41939104  T

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Target: chr1 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 27533254 - 27533308
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||||| |||||    
T  27533254 tcagttggtagggacaatgcataatatatgcaaggttcggggttcaaaccccgac 27533308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 41763206 - 41763157
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  41763206 ctcagttggtagggataatgcataaaatatgcaaggtccggggttcaaac 41763157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 8269419 - 8269364
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| ||| ||||||||| ||||||||||| |||||||||||| |||||    
T  8269419 ctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaaccccgac 8269364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 17669654 - 17669708
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||| |||||| |||  |||| ||||||||||||||||||||||||||||    
T  17669654 actcagttgatagggacaatgtataatatatgcaaggttcggggttcaaactccg 17669708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 51067946 - 51067897
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    |||||||||||| | ||||||||||| |||||||||| ||||||||||||    
T  51067946 actcagttggtaagaataatacataatatatgcaaggctcggggttcaaa 51067897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 12212304 - 12212360
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||| |||||||||||||| ||||| |||||||| || |||||||||||| |||||    
T  12212304 actcatttggtagggataatgcataatatatgcaacgtccggggttcaaaccccgac 12212360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 19620586 - 19620634
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||| ||| ||||||||| ||||||||||| |||||||||||    
T  19620586 ctcagttggtaaggacaatacataatatatgcaaggtccggggttcaaa 19620634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 34899674 - 34899622
Alignment:
Q  11 agttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||| |||| ||||||||| |||||||| ||| |||||||||||||||||    
T  34899674 agttggtggggacaatacataatatatgcaaagtttggggttcaaactccgac 34899622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 39387839 - 39387787
Alignment:
Q  11 agttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||| ||||||| ||||| |||||||||||| ||||||| |||||||||    
T  39387839 agttggtatggataatgcataaaatatgcaaggtttggggttcgaactccgac 39387787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 52043283 - 52043331
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||| ||||||| ||||| |||||||| ||||||||||||||    
T  52043283 ctcagttggtatggataatgcataaaatatgcaatgttcggggttcaaa 52043331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 17139568 - 17139513
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||||||| ||| ||||| |||| |||||| |||||||||||| |||||    
T  17139568 ctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgac 17139513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 23203332 - 23203387
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||| || | ||| ||||| |||||||||||||||||||||||| |||||    
T  23203332 ctcagttggttggaacaatgcataaaatatgcaaggttcggggttcaaaccccgac 23203387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 41769866 - 41769811
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||  ||||||| ||||| |||| |||||| ||||||||||||||||||    
T  41769866 ctcagttggtttggataatgcataatatatccaaggtccggggttcaaactccgac 41769811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 5503816 - 5503762
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccga 62  Q
    ||||||||||||  | ||| ||||| |||| ||||||||||||||||||||||||    
T  5503816 ctcagttggtagaaacaatgcataaaatatacaaggttcggggttcaaactccga 5503762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 12269034 - 12268980
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| | ||| ||||| ||||||||||| |||||||||||| |||||    
T  12269034 tcagttggtaggaacaatgcataatatatgcaaggtccggggttcaaaccccgac 12268980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 16033502 - 16033448
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||| |||||| ||| ||||| |||||||||||  |||||||||||||||    
T  16033502 actcagttgatagggacaatgcataatatatgcaaggtctggggttcaaactccg 16033448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 19396243 - 19396205
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggtt 45  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  19396243 actcagttggtagggataatgcataatatatgcaaggtt 19396205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 29800542 - 29800592
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||| ||||||| ||||| |||||||||||  |||||||||||    
T  29800542 actcagttggtaaggataatgcataaaatatgcaaggtcgggggttcaaac 29800592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 47719159 - 47719113
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttc 53  Q
    |||||||||||| ||||||| ||||| ||||||||||||||| ||||    
T  47719159 actcagttggtaaggataatgcataatatatgcaaggttcggagttc 47719113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 13778575 - 13778620
Alignment:
Q  12 gttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||| | ||||| ||||| ||||||||||||||||||||||||    
T  13778575 gttggtatgaataatgcataaaatatgcaaggttcggggttcaaac 13778620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 24978253 - 24978302
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||||  |||||||||||| ||||||||||||  |||||||||    
T  24978253 actcagttggtatagataatacataatatatgcaaggtttagggttcaaa 24978302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 29739347 - 29739396
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  29739347 ctcagttggtaaggacaatgcataaaatatgcaaggtccggggttcaaac 29739396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 34521241 - 34521192
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  34521241 ctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaac 34521192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 46012447 - 46012394
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||| |  |||||||||||| ||||||||||||||| |||| |||||||    
T  46012447 ctcagttggcaaagataatacataatatatgcaaggttcggagttcgaactccg 46012394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 48100732 - 48100781
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| |||||||||||| |||||||||||    
T  48100732 ctcagttggtatggacaatgcataaaatatgcaaggtttggggttcaaac 48100781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 1091188 - 1091240
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactc 59  Q
    ||||||||||||  || ||| |||||  |||||||||||||||||||||||||    
T  1091188 actcagttggtatagacaatgcataatgtatgcaaggttcggggttcaaactc 1091240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 12852254 - 12852198
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||||||| ||||| ||||| ||| |  |||||||||| ||||||    
T  12852254 actcagttggtagggataatgcataatatatgtaagatctggggttcaaaatccgac 12852198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 15670694 - 15670638
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||| |||| ||| |||||||||||| ||||| |||||| ||||||||||| |||||    
T  15670694 actcggttgatagtgataatacataatatatgtaaggtttggggttcaaaccccgac 15670638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 22346686 - 22346734
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||  ||||||| ||||| ||||||||||| |||||||||||    
T  22346686 ctcagttggtttggataatgcataaaatatgcaaggtccggggttcaaa 22346734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 25532984 - 25533032
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  25532984 tcagttggtatggacaatgcataatatatgcaaggtccggggttcaaac 25533032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 24 - 60
Target Start/End: Complemental strand, 39252181 - 39252145
Alignment:
Q  24 aatacataacatatgcaaggttcggggttcaaactcc 60  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  39252181 aatacataatatatgcaaggtccggggttcaaactcc 39252145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 41974772 - 41974820
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||| |||||||||| ||||| |||||||||||| | |||||||||    
T  41974772 tcagttgatagggataatgcataatatatgcaaggtttgaggttcaaac 41974820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 43426190 - 43426230
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcgg 48  Q
    ||||||||||||||| ||||||||| ||||| |||||||||    
T  43426190 ctcagttggtagggacaatacataaaatatgtaaggttcgg 43426230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 43611434 - 43611490
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgaca 64  Q
    ||||||||||| ||| ||||||||| ||||| |||||  ||||||||||| ||||||    
T  43611434 ctcagttggtatggacaatacataatatatgtaaggtatggggttcaaaccccgaca 43611490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 45190319 - 45190271
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||| ||| ||| ||||| |||||||||||||||| |||||||    
T  45190319 tcagttggtatggacaatgcataatatatgcaaggttcgggattcaaac 45190271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 51046151 - 51046207
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| | | ||||||||| ||||| ||||||||| |||| |||||||||    
T  51046151 actcagttggtatgaacaatacataaaatatgtaaggttcggagttcgaactccgac 51046207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 52262218 - 52262162
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| | | ||| ||||| |||||||| ||||| |||||||||||||||    
T  52262218 actcagttggtatgaacaatgcataaaatatgcaaagttcgaggttcaaactccgac 52262162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 48103726 - 48103673
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactcc 60  Q
    ||||||||||| |||| ||| ||||| |||||||||||||||||||||||||||    
T  48103726 actcagttggttgggacaatgcataaaatatgcaaggttcggggttcaaactcc 48103673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 16577911 - 16577862
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||||||||| |||||||||||  |||||||||||    
T  16577911 ctcagttggtagggacaatacataatatatgcaaggtctggggttcaaac 16577862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 16587751 - 16587800
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||||||||| |||||||||||  |||||||||||    
T  16587751 ctcagttggtagggacaatacataatatatgcaaggtctggggttcaaac 16587800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 47607961 - 47607908
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||||||||| | ||||||| ||||||||||| | ||||||||||||||    
T  47607961 ctcagttggtagggacattacataatatatgcaaggtccagggttcaaactccg 47607908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 5082313 - 5082365
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactc 59  Q
    ||||||||||| |||| ||||||||| ||||||||||||| | ||||||||||    
T  5082313 actcagttggttgggacaatacataatatatgcaaggttctgagttcaaactc 5082365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 19599154 - 19599210
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| ||| ||| ||||| ||||||||||| |||||||||||| |||||    
T  19599154 actcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgac 19599210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 28200437 - 28200381
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||| | ||||||||| ||||||||  |||| |||||||||||||||    
T  28200437 actcagttggtaggaacaatacataatatatgcaaaattcgaggttcaaactccgac 28200381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 3265535 - 3265485
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||| |||||||| ||||||||||| |||| ||||||||| |||||||||    
T  3265535 actcaattggtaggtataatacataaaatatacaaggttcgaggttcaaac 3265485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 41237976 - 41237926
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||| ||| ||||| ||| |||||||||||||| |||||||||    
T  41237976 actcagttggtatggacaatacgtaatatatgcaaggttcgaggttcaaac 41237926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 42829286 - 42829232
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||| |||||| ||| ||||| ||||||||| | ||||||||||||||||    
T  42829286 actcagttgatagggacaatgcataatatatgcaagctccggggttcaaactccg 42829232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Complemental strand, 44941465 - 44941427
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggtt 45  Q
    |||||||||||||||||||| ||||| ||||||||||||    
T  44941465 actcagttggtagggataatgcataatatatgcaaggtt 44941427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 10244737 - 10244786
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  10244737 ctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaac 10244786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 16537587 - 16537538
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||||||| ||||| |||| ||||||  |||||||||||    
T  16537587 ctcagttggtagggataatgcataatatatacaaggtctggggttcaaac 16537538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 16628075 - 16628124
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||||||| ||||| |||| ||||||  |||||||||||    
T  16628075 ctcagttggtagggataatgcataatatatacaaggtctggggttcaaac 16628124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 18714458 - 18714507
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  18714458 ctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaac 18714507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 19416524 - 19416573
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  19416524 ctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaac 19416573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 23221401 - 23221454
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactcc 60  Q
    ||||||||||||| || ||| ||||| ||||| |||||||| ||||||||||||    
T  23221401 actcagttggtagagacaatgcataatatatgtaaggttcgtggttcaaactcc 23221454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 27462487 - 27462438
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  27462487 ctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaac 27462438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 34000271 - 34000320
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||| || ||||||| ||||| ||||| |||||||||||||||||    
T  34000271 actcagttgataaggataatgcataatatatgtaaggttcggggttcaaa 34000320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 7388091 - 7388035
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| |||| ||| ||||| ||||| |||||||||| ||||||| |||||    
T  7388091 actcagttggttgggacaatgcataatatatgtaaggttcgggattcaaaccccgac 7388035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 7994936 - 7994880
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||| || |||||| ||||| |||||  ||||||||||| |||||    
T  7994936 actcagttggtagggacaaaacataatatatgtaaggtctggggttcaaaccccgac 7994880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Complemental strand, 10467166 - 10467122
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttc 53  Q
    |||||||||||||||||| ||||| || ||||||||| |||||||    
T  10467166 tcagttggtagggataatgcataatatttgcaaggtttggggttc 10467122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 22564194 - 22564142
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactc 59  Q
    |||||||||||||| ||||||| ||| |||||||| ||||  |||||||||||    
T  22564194 actcagttggtaggaataatacgtaatatatgcaaagttcaaggttcaaactc 22564142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 36033511 - 36033467
Alignment:
Q  12 gttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||| |||||  |||| |||||||||||||||||||||||    
T  36033511 gttggtaggaataatgtataatatatgcaaggttcggggttcaaa 36033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 36755024 - 36755079
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||| | ||| ||||| ||||| |||||||||| |||||||||||||    
T  36755024 actcagttggtagg-acaatgcataatatatgtaaggttcgggattcaaactccgac 36755079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 36760821 - 36760876
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||| | ||| ||||| ||||| |||||||||| |||||||||||||    
T  36760821 actcagttggtagg-acaatgcataatatatgtaaggttcgggattcaaactccgac 36760876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 42753578 - 42753526
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactcc 60  Q
    ||||||||| ||||| | | ||||| ||||||||||| |||||||||||||||    
T  42753578 ctcagttggaagggacagtgcataatatatgcaaggtccggggttcaaactcc 42753526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 47342486 - 47342430
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||  ||| ||| ||||| ||||||||||| ||| ||||||||||||||    
T  47342486 actcagttggtttggacaatgcataatatatgcaaggtccggagttcaaactccgac 47342430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 26356132 - 26356079
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    |||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||    
T  26356132 ctcagttggttgggacaatgcataatatatgcaaggttcggggttcaaactccg 26356079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 14429179 - 14429131
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||||||    
T  14429179 ctcagttggttgggataatacataaaatatgcaaggtccggggttcaaa 14429131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 29680607 - 29680653
Alignment:
Q  17 tagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  29680607 tagggataatgcataatatatgcaaggttcggtgttcaaactccgac 29680653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 8916526 - 8916477
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    |||||||||||||||| ||||||||| ||||||||||| ||| |||||||    
T  8916526 actcagttggtagggacaatacataatatatgcaaggtccggagttcaaa 8916477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 10018410 - 10018462
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||    
T  10018410 ctcagttggtagg-ataatgcataatatatgtaaggttcggggttcaaactccg 10018462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 21847204 - 21847249
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttc 53  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  21847204 ctcagttggtagggacaatacataatatatgcaaggtacggggttc 21847249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 32053798 - 32053851
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||||| ||| ||| ||||| |||||||||||||| |||||||||||||    
T  32053798 ctcagttggtatggacaatgcataatatatgcaaggttcgtggttcaaactccg 32053851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 788876 - 788931
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| ||| ||| ||||| ||||||||||||||| |||||||| |||||    
T  788876 ctcagttggtaaggacaatgcataatatatgcaaggttcggagttcaaaccccgac 788931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 8629748 - 8629698
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||| |||||| ||| ||| ||||| ||||||||||||||||||||||||    
T  8629748 actcaattggtatggacaatgcataatatatgcaaggttcggggttcaaac 8629698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 12735295 - 12735245
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| |||| ||| ||||| |||||||||||| |||||||||||    
T  12735295 actcagttggttgggacaatgcataaaatatgcaaggtttggggttcaaac 12735245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 30579869 - 30579919
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaact 58  Q
    |||||||||| |||| ||| ||||| |||||||||||| ||||||||||||    
T  30579869 ctcagttggttgggacaatgcataaaatatgcaaggtttggggttcaaact 30579919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 5655358 - 5655317
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggg 49  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||    
T  5655358 ctcagttggtagggacaatacataatatatgcacggttcggg 5655317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 8639056 - 8639105
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||||||| ||||  ||||||||||| ||||||||||||    
T  8639056 ctcagttggtatggataatgcatagtatatgcaaggtccggggttcaaac 8639105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 16390439 - 16390488
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| ||||| ||||| ||||||||||||    
T  16390439 ctcagttggtagggacaatgcataatatatgtaaggtccggggttcaaac 16390488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 16966451 - 16966398
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||||||||||| | ||||  |||||||||  |||||||||||||||||    
T  16966451 ctcagttggtagggatattgcatattatatgcaagtgtcggggttcaaactccg 16966398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 21029418 - 21029369
Alignment:
Q  8 ctcagttggtagggataa-tacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||||||| || | ||||| |||||||||||||||||||||||    
T  21029418 ctcagttggtagggacaaatgcataatatatgcaaggttcggggttcaaa 21029369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 24248177 - 24248222
Alignment:
Q  10 cagttggtagggataatacataacatatgcaaggttcggggttcaa 55  Q
    ||||||||| ||||||||||||| ||||| ||||| ||||||||||    
T  24248177 cagttggtaaggataatacataatatatgtaaggtccggggttcaa 24248222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 28231476 - 28231423
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    |||||||| |||||| ||| ||||| ||||||||||| ||||||||| ||||||    
T  28231476 ctcagttgatagggacaatgcataatatatgcaaggtccggggttcacactccg 28231423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 291378 - 291426
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||| |||| || ||||| ||||||||||| ||||||||||||    
T  291378 tcagttggtatggatcatgcataatatatgcaaggtccggggttcaaac 291426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 8211649 - 8211601
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||| ||||||| ||||| |||| ||| ||||||||||||||    
T  8211649 ctcagttggtatggataatgcataatatatacaaagttcggggttcaaa 8211601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 8637487 - 8637439
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||||| ||| ||||| ||||||||||| || |||||||||    
T  8637487 tcagttggtagggacaatgcataatatatgcaaggtccgaggttcaaac 8637439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 63
Target Start/End: Original strand, 12602038 - 12602089
Alignment:
Q  11 agttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| ||||||||| |||||||||| || ||||||||| ||||||    
T  12602038 agttggtagggacaatacataatatatgcaagg-tctgggttcaaaatccgac 12602089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 32006510 - 32006563
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||||||||||||| ||||| ||||| || |||||||||||||||||||    
T  32006510 ctcagttggtagggataatgcataatatatgtaaagttcggggttcaaactccg 32006563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 25115059 - 25115114
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| ||| ||| ||||||||||||||||||| |||||||||| |||||    
T  25115059 ctcagttggtatggacaatgcataacatatgcaaggttcagggttcaaaccccgac 25115114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 19997414 - 19997360
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| || ||| ||||| |||||||| |||||||||||||||||||||    
T  19997414 tcagttggtagagacaatgcataatatatgcaaagttcggggttcaaactccgac 19997360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 17423229 - 17423176
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactcc 60  Q
    ||||||||||||| || ||| ||||| ||||||||||| |||||||||||||||    
T  17423229 actcagttggtagagacaatgcataatatatgcaaggtccggggttcaaactcc 17423176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 20799445 - 20799396
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| ||||||||||| ||||||||||||    
T  20799445 ctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaac 20799396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 12 - 61
Target Start/End: Complemental strand, 25783496 - 25783447
Alignment:
Q  12 gttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    ||||||||||| ||| ||||| ||||||||||| ||||||||||||||||    
T  25783496 gttggtagggacaatgcataatatatgcaaggtccggggttcaaactccg 25783447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 28435299 - 28435250
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||||||||||||||||    
T  28435299 ctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaac 28435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 25783160 - 25783216
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||||||||||||  ||||||||||| ||  ||||||| ||||||    
T  25783160 actcagttggtagggataatacatagtatatgcaaggtccgaagttcaaattccgac 25783216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 38767082 - 38767030
Alignment:
Q  11 agttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||| | ||| ||||||||||| |||||| |||||||||||||||||    
T  38767082 agttggtaggaacaatgcataacatatgtaaggtttggggttcaaactccgac 38767030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 41520963 - 41521019
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||||| || ||| ||||| |||||||||||||  |||||||||||||||    
T  41520963 actcagttggtagagacaatgcataatatatgcaaggttcaaggttcaaactccgac 41521019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 836286 - 836231
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||||||| ||| || || ||||||||||| || |||||||||||||||    
T  836286 ctcagttggtagggacaatgcaaaatatatgcaaggtccgaggttcaaactccgac 836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 9946437 - 9946492
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| ||| ||| ||||| ||||||||||| |||||||||||| |||||    
T  9946437 ctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgac 9946492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 11949814 - 11949759
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| ||| ||| ||||| ||||||||||| |||||||||||| |||||    
T  11949814 ctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgac 11949759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 22411774 - 22411825
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactc 59  Q
    ||||||||||| ||| ||| ||||| ||||| ||||||||||||||||||||    
T  22411774 ctcagttggtatggacaatgcataatatatgtaaggttcggggttcaaactc 22411825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 23619111 - 23619166
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||||||| ||| ||||| |||| ||| |||||||||||||| ||||||    
T  23619111 ctcagttggtagggacaatgcataaaatatacaaagttcggggttcaaattccgac 23619166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 35021518 - 35021463
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||| || ||| ||||||||| |||||||||||||||||||| ||| |||||    
T  35021518 ctcagttgatatggacaatacataaaatatgcaaggttcggggttcgaaccccgac 35021463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 23225874 - 23225924
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||||| | ||| ||||| ||||||||| ||||||||||||||    
T  23225874 actcagttggtaggaacaattcataatatatgcaagattcggggttcaaac 23225924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 47490759 - 47490709
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||| ||||||| | ||| ||||||||||||| ||||||||||    
T  47490759 actcagttggtatggataatgcgtaaaatatgcaaggttccgggttcaaac 47490709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 4360695 - 4360646
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||||||| || ||||| ||||||||||| | ||||||||||    
T  4360695 ctcagttggtagggatgatgcataatatatgcaaggtgcagggttcaaac 4360646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 7230290 - 7230339
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  7230290 ctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaac 7230339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 44
Target Start/End: Complemental strand, 20096322 - 20096285
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggt 44  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  20096322 actcagttggtagggataatgcataatatatgcaaggt 20096285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 20383498 - 20383547
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||| ||||||||||||    
T  20383498 ctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaac 20383547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 22040660 - 22040709
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||| || ||| ||| ||||| ||||||||||||||||||||||||    
T  22040660 ctcagttgatatggacaatgcataatatatgcaaggttcggggttcaaac 22040709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 47814302 - 47814253
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| || |||||| ||||||||||| ||||||||||||    
T  47814302 ctcagttggtatggacaacacataatatatgcaaggtccggggttcaaac 47814253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 50362190 - 50362141
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| ||||||||||| | ||||||||||    
T  50362190 ctcagttggtagggacaatgcataatatatgcaaggtccagggttcaaac 50362141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 1753402 - 1753354
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||| ||| ||| |||||||||||||||||  |||||||||||    
T  1753402 tcagttggtaaggacaatgcataacatatgcaaggtcgggggttcaaac 1753354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 21052608 - 21052572
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggt 44  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  21052608 ctcagttggtatggataatacataatatatgcaaggt 21052572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 21318305 - 21318249
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||| ||| ||||| |||||||||||   |||||||||| |||||    
T  21318305 actcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgac 21318249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 39489617 - 39489665
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||| |||| | ||||||||  ||||||||||||||||||||||||    
T  39489617 tcagttgataggaacaatacatagtatatgcaaggttcggggttcaaac 39489665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 42845034 - 42845090
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||| | ||| ||| ||||| ||||||||||| ||||||| ||||||||||    
T  42845034 actcagttggaaaggacaatgcataatatatgcaaggtccggggttaaaactccgac 42845090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 44
Target Start/End: Complemental strand, 50442798 - 50442762
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggt 44  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  50442798 ctcagttggtagggataatgcataatatatgcaaggt 50442762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 50668351 - 50668399
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||| | | ||||||||| ||||| ||||||||||||||||||    
T  50668351 tcagttggtatgaacaatacataatatatgtaaggttcggggttcaaac 50668399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 161150 - 161206
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||| ||| ||| ||||| |||||||||||||||||||||||| |||||    
T  161150 actcagttggtatggacaatgcataaaatatgcaaggttcggggttcaaaccccgac 161206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000008; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 26799193 - 26799249
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||| |||| |||||    
T  26799193 actcagttggtagggacaatgcataaaatatgcaaggttcggggttaaaaccccgac 26799249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 37141368 - 37141420
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    |||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||    
T  37141368 tcagttggtatggacaatgcataatatatgcaaggttcggggttcaaactccg 37141420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 12800950 - 12800896
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||| ||| ||||||||| ||||||||||| |||||||||||| |||||    
T  12800950 tcagttggtatggacaatacataatatatgcaaggtccggggttcaaaccccgac 12800896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 33996080 - 33996134
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| || ||| ||||| |||||||| |||||||||||||||||||||    
T  33996080 tcagttggtagagacaatgcataatatatgcaaagttcggggttcaaactccgac 33996134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 8717526 - 8717477
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||| ||||| ||||||||||||||||||||||||    
T  8717526 ctcagttggtatggacaatgcataatatatgcaaggttcggggttcaaac 8717477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 10982735 - 10982784
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    |||||||||||| ||| |||| |||| |||||||||||||||||||||||    
T  10982735 actcagttggtatggacaatatataatatatgcaaggttcggggttcaaa 10982784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 12714421 - 12714373
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||| ||||| ||| ||||| |||||||||||||||||||||||    
T  12714421 ctcagttggaagggacaatgcataatatatgcaaggttcggggttcaaa 12714373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 58
Target Start/End: Original strand, 5179803 - 5179853
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaact 58  Q
    ||||||||||| ||| ||| ||||| |||| ||||||||||||||||||||    
T  5179803 ctcagttggtaaggacaatgcataatatatacaaggttcggggttcaaact 5179853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Original strand, 7553688 - 7553742
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    |||||||||||||||| ||| ||||| ||||||||||| |  |||||||||||||    
T  7553688 actcagttggtagggacaatgcataatatatgcaaggtccaaggttcaaactccg 7553742  T

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Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 69
Target Start/End: Original strand, 18942928 - 18942990
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactcc-gacacgacc 69  Q
    ||||||||||||||||||| ||||| ||||||| ||| |||| ||||||| || |||||||||    
T  18942928 ctcagttggtagggataatgcataatatatgcatggtccgggtttcaaaccccggacacgacc 18942990  T

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Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 18959158 - 18959208
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||| ||| |||||||||| ||||| |||||||||||||| |||||||||    
T  18959158 actcaattgttagggataatgcataatatatgcaaggttcgaggttcaaac 18959208  T

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Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 62
Target Start/End: Complemental strand, 22504321 - 22504287
Alignment:
Q  28 cataacatatgcaaggttcggggttcaaactccga 62  Q
    ||||| |||||||||||||||||||||||||||||    
T  22504321 cataaaatatgcaaggttcggggttcaaactccga 22504287  T

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Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 24195275 - 24195313
Alignment:
Q  24 aatacataacatatgcaaggttcggggttcaaactccga 62  Q
    ||||||||| ||||||||||| |||||||||||||||||    
T  24195275 aatacataatatatgcaaggtccggggttcaaactccga 24195313  T

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Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 29716752 - 29716698
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    |||||||||||||| | ||| ||||| ||||||||||| |||| |||||||||||    
T  29716752 actcagttggtaggaacaattcataatatatgcaaggtccgggattcaaactccg 29716698  T

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Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 32192907 - 32192961
Alignment:
Q  11 agttggtagggataatacataacatatgcaaggttcggggttcaaactccgacac 65  Q
    |||||||| ||| ||| ||||| |||||||||||||||||||| ||| |||||||    
T  32192907 agttggtatggacaatgcataatatatgcaaggttcggggttcgaaccccgacac 32192961  T

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Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 32421578 - 32421628
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||||| ||| |||| |||| ||||||||||| ||||||||||||    
T  32421578 actcagttggtatggacaatatataatatatgcaaggtccggggttcaaac 32421628  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 35700445 - 35700391
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||| || ||| ||||| ||||||||  ||||||||||||||||||||    
T  35700445 tcagttggtagagacaatgcataatatatgcaaaattcggggttcaaactccgac 35700391  T

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Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 38826528 - 38826478
Alignment:
Q  13 ttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||| ||||| ||||| | ||||||||||||||||| ||||||||||    
T  38826528 ttggtaggaataatgcataataaatgcaaggttcggggttgaaactccgac 38826478  T

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Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 45049584 - 45049634
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||| |||||| ||||||| ||||| ||||| ||||||||||||||||||    
T  45049584 actcaattggtatggataatgcataaaatatgtaaggttcggggttcaaac 45049634  T

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Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 36310085 - 36310142
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaa-ggttcggggttcaaactccgac 63  Q
    |||||||| || |||| ||||||||| |||||||| |||||||||||||||| |||||    
T  36310085 actcagttagttgggacaatacataaaatatgcaaaggttcggggttcaaaccccgac 36310142  T

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Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 39139035 - 39138994
Alignment:
Q  22 ataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||| ||||| ||||| ||||||||||||||||||||||||    
T  39139035 ataatgcataaaatatgtaaggttcggggttcaaactccgac 39138994  T

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Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 57
Target Start/End: Original strand, 39821894 - 39821943
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||||||| ||| ||||| |||||||||||  |||||||||||    
T  39821894 ctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaac 39821943  T

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Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 40482352 - 40482405
Alignment:
Q  11 agttggtagggataatacataacatatgcaaggttcggggttcaaactccgaca 64  Q
    ||||||||  ||||||| ||||  |||||||||| |||||||||||||||||||    
T  40482352 agttggtatagataatatataatgtatgcaaggtccggggttcaaactccgaca 40482405  T

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Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 4830019 - 4830063
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttc 53  Q
    |||||||||| ||| ||| ||||| ||||||||||||||||||||    
T  4830019 tcagttggtatggacaatgcataatatatgcaaggttcggggttc 4830063  T

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Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 14279623 - 14279571
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactc 59  Q
    ||||||||||||  || ||| ||||| |||||||||||||||||||| |||||    
T  14279623 actcagttggtatagacaatgcataaaatatgcaaggttcggggttcgaactc 14279571  T

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Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 28580954 - 28581002
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaa 56  Q
    ||||||||||| | ||||| ||||| ||||| |||||||||||||||||    
T  28580954 ctcagttggtatgaataatgcataaaatatgtaaggttcggggttcaaa 28581002  T

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Target: scaffold0983 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 3366 - 3317
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| || |||||| ||||||||||||||||||||||||    
T  3366 ctcagttggtaaggacaagacataatatatgcaaggttcggggttcaaac 3317  T

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Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 99046 - 99103
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgaca 64  Q
    ||||||||| |||||| ||| ||||| |||||||||||  ||||||||||||||||||    
T  99046 actcagttgatagggacaatgcataatatatgcaaggtctggggttcaaactccgaca 99103  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 221064 - 221009
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    ||||||||||||||||||||||||| |||||||| ||   |||||||||| |||||    
T  221064 ctcagttggtagggataatacataatatatgcaaagtctagggttcaaaccccgac 221009  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 53436 - 53490
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||| ||||||| |||| |||||||||||||||| |||| ||||||| |||||    
T  53436 tcagttagtagggacaatatataacatatgcaaggtccgggattcaaaccccgac 53490  T

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Target: scaffold1160 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1160
Description:

Target: scaffold1160; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 1764 - 1719
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggtt 52  Q
    |||||||||||||||| ||| ||||| |||||||||||||| ||||    
T  1764 actcagttggtagggacaatgcataaaatatgcaaggttcgaggtt 1719  T

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Target: scaffold1149 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 2346 - 2391
Alignment:
Q  12 gttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    ||||||||||| ||| ||||| |||||||||||| |||||||||||    
T  2346 gttggtagggacaatgcataatatatgcaaggtttggggttcaaac 2391  T

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Target: scaffold0038 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 31973 - 31920
Alignment:
Q  8 ctcagttggtagggataatacataacatatgcaaggttcggggttcaaactccg 61  Q
    |||||||| |||||| ||| ||||| ||||||||||| ||||||||| ||||||    
T  31973 ctcagttgatagggacaatgcataatatatgcaaggtccggggttcacactccg 31920  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 53432 - 53376
Alignment:
Q  7 actcagttggtagggataatacataacatatgcaaggttcggggttcaaactccgac 63  Q
    |||||||||| ||||| ||| ||||| |||||||||||  ||||||||||| |||||    
T  53432 actcagttggaagggacaatgcataaaatatgcaaggtctggggttcaaaccccgac 53376  T

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Target: scaffold0003 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 57
Target Start/End: Complemental strand, 361298 - 361250
Alignment:
Q  9 tcagttggtagggataatacataacatatgcaaggttcggggttcaaac 57  Q
    |||||||||| ||||||| ||||| |||||  |||||||||||||||||    
T  361298 tcagttggtatggataatgcataaaatatgttaggttcggggttcaaac 361250  T

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