View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4459-Insertion-8 (Length: 291)
Name: NF4459-Insertion-8
Description: NF4459
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4459-Insertion-8 |
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Alignment Details
Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 6807079 - 6807196
Alignment:
| Q |
8 |
gttaagaccaatatttgtccatgatctgagaaagattaaaattgcaaccgcaacctggccaacataagtaaccaaacgcctactccaaagtgcattgtct |
107 |
Q |
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| T |
6807079 |
gttaagaccagtatttgtccatgatcggagaaagattaaaattgcaaccgcaacctgtccaacataagtaaccaaacgcctactccaaagtgcattgtct |
6807178 |
T |
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| Q |
108 |
tccattgagtaagcagta |
125 |
Q |
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| T |
6807179 |
tccattgagtaagcagta |
6807196 |
T |
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Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 7329276 - 7329381
Alignment:
| Q |
20 |
atttgtccatgatctgagaaagattaaaattgcaaccgcaacctggccaacataagtaaccaaacgcctactccaaagtgcattgtcttccattgagtaa |
119 |
Q |
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| T |
7329276 |
atttgtccatgatctaagaaaggttaaaaatgcaaccacaacttgtccgatataagtaaccaaacgcctactccaaagtgcattgtcttccatagagtaa |
7329375 |
T |
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| Q |
120 |
gcagta |
125 |
Q |
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|||||| |
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| T |
7329376 |
gcagta |
7329381 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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