View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4460_high_4 (Length: 237)
Name: NF4460_high_4
Description: NF4460
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4460_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 10562608 - 10562829
Alignment:
| Q |
1 |
taatggtaaaaaggctaaccagaaataagtgtgccaccctacatatagtaaactcatatcagtaggta-attctaatatgtcattgtcaaataaaacatt |
99 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |
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| T |
10562608 |
taatggtaaaaaggctaaccagaaataagtgtgccaccctgcatatagtaaactcatatcagtaggtagattctaaaatgtcattgttaaataaaacatt |
10562707 |
T |
|
| Q |
100 |
gctaaagagaatcattggtttaccttcaagattcaacagcaaaaagagcacaacaaagagccacaggtaccaactatggtatgtataacaatcaaaaata |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || | |
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| T |
10562708 |
gctaaagagaatcattggtttaccttcaagattcaacagcaaaaaaagcacaacaaagagccacaggtaccaactatggtatgtataacaatcaagaaaa |
10562807 |
T |
|
| Q |
200 |
gttaacatttcttgcattaaac |
221 |
Q |
| |
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|||||| ||||||||||||||| |
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| T |
10562808 |
gttaacgtttcttgcattaaac |
10562829 |
T |
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