View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4461-Insertion-5 (Length: 899)

Name: NF4461-Insertion-5
Description: NF4461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4461-Insertion-5
NF4461-Insertion-5
[»] chr7 (23 HSPs)
chr7 (12-145)||(39603525-39603658)
chr7 (344-416)||(1565776-1565848)
chr7 (344-416)||(1738494-1738566)
chr7 (344-416)||(7240760-7240832)
chr7 (344-416)||(9268767-9268839)
chr7 (344-416)||(31319446-31319518)
chr7 (344-416)||(38063960-38064032)
chr7 (344-416)||(46840871-46840943)
chr7 (329-416)||(22285698-22285782)
chr7 (344-416)||(94365-94437)
chr7 (344-416)||(7482236-7482308)
chr7 (344-416)||(23314186-23314258)
chr7 (344-416)||(28536798-28536870)
chr7 (344-416)||(36016243-36016315)
chr7 (344-416)||(36583406-36583478)
chr7 (344-416)||(38441471-38441543)
chr7 (344-416)||(4790259-4790331)
chr7 (349-416)||(33418392-33418459)
chr7 (344-416)||(9575420-9575492)
chr7 (344-416)||(40840166-40840238)
chr7 (432-516)||(16413509-16413598)
chr7 (328-379)||(9268840-9268888)
chr7 (193-230)||(39603663-39603700)
[»] chr3 (36 HSPs)
chr3 (516-729)||(40895894-40896111)
chr3 (344-416)||(2787879-2787951)
chr3 (344-416)||(4238605-4238677)
chr3 (344-416)||(8817433-8817505)
chr3 (344-416)||(10297990-10298062)
chr3 (344-416)||(17653723-17653795)
chr3 (344-416)||(19557099-19557171)
chr3 (344-416)||(22721942-22722014)
chr3 (344-416)||(35513484-35513556)
chr3 (344-416)||(37508932-37509004)
chr3 (344-416)||(44785443-44785515)
chr3 (344-416)||(49823428-49823500)
chr3 (327-416)||(46208027-46208113)
chr3 (328-416)||(36095727-36095812)
chr3 (344-416)||(8437436-8437508)
chr3 (344-416)||(9111541-9111613)
chr3 (344-416)||(21295373-21295445)
chr3 (344-416)||(34080077-34080149)
chr3 (344-416)||(38964403-38964475)
chr3 (344-416)||(40691043-40691115)
chr3 (344-416)||(48340408-48340480)
chr3 (348-416)||(51406688-51406756)
chr3 (344-416)||(42507402-42507474)
chr3 (344-407)||(6013392-6013455)
chr3 (348-416)||(42170393-42170461)
chr3 (345-416)||(33942979-33943050)
chr3 (350-417)||(8951942-8952009)
chr3 (345-416)||(43323072-43323143)
chr3 (344-388)||(33128217-33128261)
chr3 (325-379)||(46208114-46208165)
chr3 (343-391)||(9213588-9213636)
chr3 (344-379)||(21295337-21295372)
chr3 (348-383)||(29285838-29285873)
chr3 (348-386)||(26001141-26001179)
chr3 (327-379)||(49823378-49823427)
chr3 (329-416)||(9213515-9213599)
[»] chr4 (36 HSPs)
chr4 (19-145)||(21827774-21827905)
chr4 (344-416)||(3372132-3372204)
chr4 (344-416)||(3904730-3904802)
chr4 (344-416)||(20538733-20538805)
chr4 (344-416)||(47833622-47833694)
chr4 (344-416)||(48336274-48336346)
chr4 (344-416)||(53337381-53337453)
chr4 (344-414)||(24704381-24704451)
chr4 (347-416)||(5986890-5986959)
chr4 (347-416)||(33621810-33621879)
chr4 (329-416)||(43900548-43900632)
chr4 (344-416)||(3992987-3993059)
chr4 (344-416)||(6121940-6122012)
chr4 (344-416)||(33551212-33551284)
chr4 (344-416)||(42797743-42797815)
chr4 (344-416)||(52756686-52756758)
chr4 (345-416)||(47838664-47838735)
chr4 (347-416)||(46797739-46797808)
chr4 (344-416)||(7579321-7579393)
chr4 (344-416)||(26231588-26231660)
chr4 (328-406)||(40913246-40913321)
chr4 (344-416)||(41469813-41469885)
chr4 (345-416)||(41615723-41615794)
chr4 (344-416)||(51894629-51894701)
chr4 (345-416)||(3422073-3422143)
chr4 (344-415)||(25855094-25855165)
chr4 (344-408)||(29845656-29845720)
chr4 (344-411)||(17236839-17236907)
chr4 (348-416)||(50430465-50430533)
chr4 (344-387)||(4780371-4780414)
chr4 (325-387)||(24704446-24704505)
chr4 (344-379)||(42797816-42797851)
chr4 (348-418)||(31013036-31013106)
chr4 (344-389)||(5986950-5986995)
chr4 (344-401)||(6924746-6924802)
chr4 (347-404)||(17344227-17344284)
[»] scaffold0009 (2 HSPs)
scaffold0009 (344-416)||(49516-49588)
scaffold0009 (344-389)||(49579-49624)
[»] scaffold1707 (1 HSPs)
scaffold1707 (344-416)||(1346-1418)
[»] scaffold0482 (1 HSPs)
scaffold0482 (344-416)||(12871-12943)
[»] scaffold0204 (1 HSPs)
scaffold0204 (344-416)||(23796-23868)
[»] chr8 (31 HSPs)
chr8 (344-416)||(54659-54731)
chr8 (344-416)||(2890209-2890281)
chr8 (344-416)||(3304325-3304397)
chr8 (344-416)||(6552666-6552738)
chr8 (344-416)||(7785825-7785897)
chr8 (344-416)||(7805746-7805818)
chr8 (344-416)||(12343187-12343259)
chr8 (344-416)||(31654624-31654696)
chr8 (344-416)||(32114522-32114594)
chr8 (344-416)||(43199401-43199473)
chr8 (344-416)||(44498234-44498306)
chr8 (345-414)||(25601049-25601118)
chr8 (348-416)||(12763701-12763769)
chr8 (344-416)||(15888399-15888471)
chr8 (344-416)||(32211410-32211482)
chr8 (344-416)||(39571250-39571322)
chr8 (344-416)||(7012182-7012254)
chr8 (344-416)||(33289308-33289380)
chr8 (347-416)||(13578871-13578940)
chr8 (344-395)||(4245649-4245700)
chr8 (344-416)||(8587181-8587253)
chr8 (344-401)||(28463622-28463679)
chr8 (344-387)||(27422266-27422309)
chr8 (345-390)||(13246806-13246851)
chr8 (328-387)||(25600998-25601054)
chr8 (345-401)||(24692040-24692096)
chr8 (345-404)||(17006923-17006982)
chr8 (345-404)||(17570265-17570324)
chr8 (345-416)||(24203020-24203091)
chr8 (327-379)||(54609-54658)
chr8 (328-379)||(2890160-2890208)
[»] chr6 (26 HSPs)
chr6 (344-416)||(2830346-2830418)
chr6 (344-416)||(6330126-6330198)
chr6 (344-416)||(8383016-8383088)
chr6 (344-416)||(11572192-11572264)
chr6 (344-416)||(13853640-13853712)
chr6 (344-416)||(26602334-26602406)
chr6 (344-416)||(33052841-33052913)
chr6 (344-416)||(8099541-8099613)
chr6 (344-416)||(35031048-35031120)
chr6 (345-416)||(6143566-6143637)
chr6 (348-416)||(8417840-8417908)
chr6 (344-416)||(9644707-9644779)
chr6 (344-416)||(9650724-9650796)
chr6 (344-416)||(6068577-6068649)
chr6 (349-416)||(28747181-28747248)
chr6 (347-416)||(13043772-13043841)
chr6 (344-406)||(6068997-6069059)
chr6 (363-415)||(17992018-17992070)
chr6 (352-390)||(6549902-6549940)
chr6 (348-416)||(7597024-7597092)
chr6 (344-416)||(14936504-14936576)
chr6 (328-389)||(3788111-3788169)
chr6 (327-379)||(13853590-13853639)
chr6 (328-379)||(6330199-6330247)
chr6 (328-379)||(11572143-11572191)
chr6 (344-377)||(12473651-12473684)
[»] chr5 (25 HSPs)
chr5 (344-416)||(9395361-9395433)
chr5 (344-416)||(23359953-23360025)
chr5 (344-416)||(37149002-37149074)
chr5 (345-416)||(11795180-11795251)
chr5 (345-416)||(26350397-26350468)
chr5 (345-416)||(36563585-36563656)
chr5 (344-416)||(583000-583072)
chr5 (344-416)||(13033062-13033134)
chr5 (344-416)||(13103035-13103107)
chr5 (344-416)||(20848085-20848157)
chr5 (344-416)||(41989454-41989526)
chr5 (344-416)||(4443971-4444043)
chr5 (344-416)||(17025635-17025707)
chr5 (344-416)||(37641964-37642037)
chr5 (357-416)||(21575970-21576029)
chr5 (345-404)||(38361750-38361809)
chr5 (354-416)||(6126845-6126907)
chr5 (344-416)||(13539914-13539982)
chr5 (382-414)||(35904448-35904480)
chr5 (344-387)||(966224-966267)
chr5 (350-416)||(2629591-2629657)
chr5 (327-379)||(17025708-17025757)
chr5 (347-416)||(3549594-3549663)
chr5 (344-377)||(11574166-11574199)
chr5 (345-418)||(27080985-27081058)
[»] chr2 (29 HSPs)
chr2 (344-416)||(3055569-3055641)
chr2 (344-416)||(4683979-4684051)
chr2 (344-416)||(13197757-13197829)
chr2 (344-416)||(15896853-15896925)
chr2 (344-416)||(37990060-37990132)
chr2 (344-416)||(41478686-41478758)
chr2 (344-416)||(44397558-44397630)
chr2 (344-416)||(44398697-44398769)
chr2 (344-416)||(15372237-15372309)
chr2 (344-416)||(16044364-16044436)
chr2 (344-416)||(16243830-16243902)
chr2 (344-416)||(37666657-37666729)
chr2 (347-416)||(13344498-13344567)
chr2 (344-416)||(6648566-6648638)
chr2 (348-416)||(9047802-9047870)
chr2 (344-416)||(38917569-38917641)
chr2 (344-416)||(41492943-41493015)
chr2 (347-416)||(12337984-12338053)
chr2 (345-416)||(12170446-12170517)
chr2 (345-416)||(30099229-30099300)
chr2 (361-416)||(44804625-44804680)
chr2 (352-416)||(16734802-16734866)
chr2 (345-413)||(31150665-31150733)
chr2 (364-416)||(41453090-41453142)
chr2 (348-404)||(4553069-4553125)
chr2 (329-379)||(41492895-41492942)
chr2 (344-391)||(23227344-23227391)
chr2 (327-379)||(38917519-38917568)
chr2 (328-379)||(44398770-44398818)
[»] chr1 (29 HSPs)
chr1 (344-416)||(9981658-9981730)
chr1 (344-416)||(14984848-14984920)
chr1 (344-416)||(26471112-26471184)
chr1 (344-416)||(27159405-27159477)
chr1 (344-416)||(31842842-31842914)
chr1 (344-416)||(39402013-39402085)
chr1 (344-416)||(44668140-44668212)
chr1 (344-416)||(47216746-47216818)
chr1 (344-416)||(1050899-1050971)
chr1 (344-416)||(11795944-11796016)
chr1 (344-416)||(12483675-12483747)
chr1 (344-416)||(23278048-23278120)
chr1 (344-416)||(34042707-34042779)
chr1 (344-416)||(44955253-44955325)
chr1 (344-416)||(47777528-47777600)
chr1 (348-416)||(47588384-47588452)
chr1 (345-416)||(25694331-25694402)
chr1 (344-416)||(17556763-17556836)
chr1 (344-416)||(47969705-47969778)
chr1 (329-405)||(11897053-11897126)
chr1 (327-414)||(16448157-16448241)
chr1 (348-416)||(11989796-11989864)
chr1 (348-416)||(12213521-12213589)
chr1 (344-387)||(37552217-37552260)
chr1 (329-379)||(11897138-11897185)
chr1 (344-379)||(44955217-44955252)
chr1 (329-389)||(12483627-12483684)
chr1 (344-414)||(37552152-37552222)
chr1 (328-379)||(25694403-25694451)
[»] scaffold0464 (1 HSPs)
scaffold0464 (344-416)||(6178-6250)
[»] scaffold0415 (1 HSPs)
scaffold0415 (344-408)||(13781-13845)
[»] scaffold0003 (1 HSPs)
scaffold0003 (432-516)||(2221-2310)
[»] scaffold0650 (1 HSPs)
scaffold0650 (328-416)||(32-116)
[»] scaffold0011 (1 HSPs)
scaffold0011 (345-407)||(231359-231421)


Alignment Details
Target: chr7 (Bit Score: 98; Significance: 8e-48; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 12 - 145
Target Start/End: Original strand, 39603525 - 39603658
Alignment:
Q  12 cacaaatttcttgttccataaataggtttcaaagctacaatttacaattcatacaatagacataaggaaaatataaacataaacacacatcctataaata 111  Q
    |||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||| || ||| |||||||||||||||| |||    
T  39603525 cacaaaattcttgttccatacataggtttcaaagctacaatttataattcatacaatagacataatgaaaatgtagacacaaacacacatcctatacata 39603624  T
Q  112 tattttgtgtagcaaaactcagcacctcaaaaac 145  Q
    |||||||||||| |||||||||||||||||||||    
T  39603625 tattttgtgtagaaaaactcagcacctcaaaaac 39603658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 1565848 - 1565776
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1565848 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 1565776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 1738566 - 1738494
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1738566 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 1738494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 7240760 - 7240832
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7240760 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 7240832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 9268767 - 9268839
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9268767 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 9268839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 31319518 - 31319446
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31319518 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 31319446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 38064032 - 38063960
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38064032 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 38063960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 46840871 - 46840943
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  46840871 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 46840943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 329 - 416
Target Start/End: Original strand, 22285698 - 22285782
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  22285698 atactccctccggtc---ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatca 22285782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 94437 - 94365
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  94437 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatca 94365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 7482236 - 7482308
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  7482236 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatca 7482308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 23314258 - 23314186
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  23314258 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatca 23314186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 28536870 - 28536798
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  28536870 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggaatgaatttttaactagatacatca 28536798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 36016315 - 36016243
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  36016315 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatca 36016243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 36583406 - 36583478
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  36583406 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggacttaatttttaactagatacatca 36583478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 38441471 - 38441543
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  38441471 gtcctatttataagagaaatttatgtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatca 38441543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 4790259 - 4790331
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  4790259 gtcctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactaaatttttaactagatacatca 4790331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 349 - 416
Target Start/End: Original strand, 33418392 - 33418459
Alignment:
Q  349 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  33418392 atttttaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatca 33418459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 9575420 - 9575492
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||| ||||||||| || ||||||||||||| || |||||| ||||||||||||||||| ||||||||    
T  9575420 gtcctatttgtaagagaaagttgggtcaacaaaagttaacgtatttagactgaatttttaactagatacatca 9575492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 40840238 - 40840166
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||| |||||||| ||| || ||||||| | |||||||||||||||||||||||||||| |||||||    
T  40840238 gtcctatttagaagagaaagttaagttaacaaaaatcaatgtatttggactgaatttttaactaagtacatca 40840166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 432 - 516
Target Start/End: Complemental strand, 16413598 - 16413509
Alignment:
Q  432 caaacaagaataaaatagaggacaataaaacaacaa-----atactcactcaaaaattgatggtcgtgaaagtagaactcacatgaagaa 516  Q
    ||||||||||||||| ||| ||||||||||||||||     | |  |||| |||||||||||||||||||||| |||||||| |||||||    
T  16413598 caaacaagaataaaaaagaagacaataaaacaacaacagagaaaaacactaaaaaattgatggtcgtgaaagtggaactcacgtgaagaa 16413509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 9268888 - 9268840
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  9268888 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 9268840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 230
Target Start/End: Original strand, 39603663 - 39603700
Alignment:
Q  193 gcaaaaacaacaagatgcaagtacaacactcacttgta 230  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  39603663 gcaaaaacaaagagatgcaagtacaacactcacttgta 39603700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 1e-37; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 516 - 729
Target Start/End: Original strand, 40895894 - 40896111
Alignment:
Q  516 aaaatcattaggtgtagaggagacccttgaagcttcgtaccctatgc--aaacaaggatgaatgaaggtgtaggagaacgagggtagaacaaaaacgtgc 613  Q
    ||||||||||||||  || |||||||||||||||| |||||||||||  |||||||||| |||||||||| |||||||||||||||||  | ||| ||      
T  40895894 aaaatcattaggtgcggatgagacccttgaagctttgtaccctatgcaaaaacaaggataaatgaaggtgaaggagaacgagggtagataagaaatgtaa 40895993  T
Q  614 ttttgactaagcagaaaccgcaaacggtcgcccaacacatggagattagtcgaag--aaagagaaaacgagggtgaaggaggatcgtgaatg-aggattt 710  Q
    ||||||||| ||| ||||| ||||| |||| |||||| | | |||| ||||||||  | ||||||||||||||||||||||| || |||||| |||||||    
T  40895994 ttttgactacgcataaaccacaaaccgtcg-ccaacataggaagatcagtcgaagacagagagaaaacgagggtgaaggagggtcttgaatgaaggattt 40896092  T
Q  711 ccggagaacgagggttttt 729  Q
    | |||||| ||||||||||    
T  40896093 ctggagaatgagggttttt 40896111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 2787951 - 2787879
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2787951 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 2787879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 4238605 - 4238677
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4238605 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 4238677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 8817505 - 8817433
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8817505 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 8817433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 10297990 - 10298062
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10297990 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 10298062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 17653723 - 17653795
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17653723 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 17653795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 19557171 - 19557099
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19557171 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 19557099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 22721942 - 22722014
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22721942 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 22722014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 35513484 - 35513556
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35513484 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 35513556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 37508932 - 37509004
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37508932 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 37509004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 44785515 - 44785443
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44785515 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 44785443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 49823500 - 49823428
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  49823500 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 49823428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 327 - 416
Target Start/End: Original strand, 46208027 - 46208113
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  46208027 ttatactccctccggtc---ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatca 46208113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 328 - 416
Target Start/End: Complemental strand, 36095812 - 36095727
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36095812 tatactccctccggtc---ctatttataagataaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 36095727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 8437436 - 8437508
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  8437436 gtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatca 8437508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 9111613 - 9111541
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  9111613 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatca 9111541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 21295445 - 21295373
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  21295445 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatca 21295373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 34080149 - 34080077
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  34080149 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacaagatacatca 34080077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 38964403 - 38964475
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38964403 gtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 38964475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 40691115 - 40691043
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  40691115 gtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggactgaatttttaactagatacatca 40691043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 48340408 - 48340480
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48340408 gtcctatttacaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 48340480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 348 - 416
Target Start/End: Original strand, 51406688 - 51406756
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  51406688 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 51406756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 42507474 - 42507402
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  42507474 gtcctatttataatagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatca 42507402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 344 - 407
Target Start/End: Complemental strand, 6013455 - 6013392
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 407  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6013455 gtccaatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 6013392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 42170461 - 42170393
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||    
T  42170461 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggagtgaatttttaaccagatacatca 42170393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 33943050 - 33942979
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  33943050 tcctatttataaaagaaagttaggtcaacaaaagttaatgtatttggactgaatttttaactagatacatca 33942979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 350 - 417
Target Start/End: Complemental strand, 8952009 - 8951942
Alignment:
Q  350 tttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcat 417  Q
    ||||||||||||| ||   || |||||||| ||||||||||||||||||||||||| |||||||||||    
T  8952009 tttataagagaaagttgaatcgacaaaagttaatgtatttggactgaatttttaacaaaatacatcat 8951942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 345 - 416
Target Start/End: Original strand, 43323072 - 43323143
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||| ||| || |||||||||||||  ||||||||||| | |||||||||| ||||||||||    
T  43323072 tcctatttataagaaaaaattgggtcaacaaaagttgatgtatttggattaaatttttaaccaaatacatca 43323143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 33128217 - 33128261
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatt 388  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||    
T  33128217 gtcctaattataagagaaatttaggtcaacaaaagttaatgtatt 33128261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 325 - 379
Target Start/End: Complemental strand, 46208165 - 46208114
Alignment:
Q  325 agttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||||   ||||||||||||||| |||||||||||||||||    
T  46208165 agttatactccctccggtc---ctatttataagagaattttaggtcaacaaaagt 46208114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 9213636 - 9213588
Alignment:
Q  343 cgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 391  Q
    |||||||||||| |||||||||||||||||||||| |  ||||||||||    
T  9213636 cgtcctatttattagagaaatttaggtcaacaaaaattgatgtatttgg 9213588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 379
Target Start/End: Original strand, 21295337 - 21295372
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||| |||||||||||||||||    
T  21295337 gtcctatttataagagaattttaggtcaacaaaagt 21295372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 383
Target Start/End: Complemental strand, 29285873 - 29285838
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaat 383  Q
    ||||||||||| ||||||||||||||||||||||||    
T  29285873 tatttataagataaatttaggtcaacaaaagtgaat 29285838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 348 - 386
Target Start/End: Complemental strand, 26001179 - 26001141
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgta 386  Q
    ||||||||||||||||||| |||||||||||| ||||||    
T  26001179 tatttataagagaaatttaagtcaacaaaagttaatgta 26001141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 49823378 - 49823427
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  49823378 ttatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 49823427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 416
Target Start/End: Original strand, 9213515 - 9213599
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||   |||||||||| ||| ||||  ||||||||||||  |||||| |||||| | ||| |||| ||||||||||    
T  9213515 atactccctccggtc---ctatttataaaagacattttagtcaacaaaagttgatgtatctggactaattttataaccaaatacatca 9213599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 5e-34; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 19 - 145
Target Start/End: Original strand, 21827774 - 21827905
Alignment:
Q  19 ttcttgttccataaataggtttcaaagctacaatttacaattcatacaatagacataaggaaaatataaacataaacacac----atcctataaatatat 114  Q
    ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||| || ||| ||||||||    |||||||| ||||||    
T  21827774 ttcttgttccatacataggtttcaaagctacaatttacagttcatacaatagacataaagaaaatgtagacacaaacacacatcgatcctatacatatat 21827873  T
Q  115 tttgtgtagc-aaaactcagcacctcaaaaac 145  Q
    |||||||||| |||| ||||||||||||||||    
T  21827874 tttgtgtagcaaaaaatcagcacctcaaaaac 21827905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 3372132 - 3372204
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3372132 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 3372204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 3904802 - 3904730
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3904802 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 3904730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 20538805 - 20538733
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20538805 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 20538733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 47833622 - 47833694
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47833622 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 47833694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 48336274 - 48336346
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  48336274 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 48336346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 53337381 - 53337453
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  53337381 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 53337453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 24704381 - 24704451
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacat 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24704381 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacat 24704451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 5986890 - 5986959
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5986890 ctatttataagagaaatataggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 5986959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 33621810 - 33621879
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33621810 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 33621879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 329 - 416
Target Start/End: Original strand, 43900548 - 43900632
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  43900548 atactccctccggtc---ctatttataagagaaatttaggtcaacaaaagtaaatgtatttggactgaatttttaactagatacatca 43900632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 3992987 - 3993059
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3992987 gtcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 3993059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 6122012 - 6121940
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6122012 gtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 6121940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 33551212 - 33551284
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  33551212 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtattttgactgaatttttaactagatacatca 33551284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 42797743 - 42797815
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42797743 gtcctatatataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 42797815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 52756686 - 52756758
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  52756686 gtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatca 52756758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 47838735 - 47838664
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47838735 tcctatttataagagaaatttcggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 47838664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 46797739 - 46797808
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  46797739 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatatatca 46797808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 7579321 - 7579393
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||    
T  7579321 gtcctatttataagagaaatttaggttaacaaaagtgaatgtatttggattgaatttttaactagatacatca 7579393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 26231588 - 26231660
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  26231588 gtcctatttataagagaaatttaggtcaacaaaagcgaatgtatttggactgaatttttaactagatatatca 26231660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 40913321 - 40913246
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact 406  Q
    ||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  40913321 tatactccctccggtc---ctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaact 40913246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 41469885 - 41469813
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  41469885 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatca 41469813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 41615794 - 41615723
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  41615794 tcctatttataagagaaaattaggtcaacaaaagttaatgtatttggacttaatttttaactaaatacatca 41615723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 51894701 - 51894629
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| | ||||||||    
T  51894701 gtcctatttataagaaaaatttaggtcaacaaaagtgaatgtttttggactgaatttttaaccagatacatca 51894629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 345 - 416
Target Start/End: Original strand, 3422073 - 3422143
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||    
T  3422073 tcctatttataagagaaatttaggtcaacaaaa-tgaatgtatttgaactgaatttttaactagatacatca 3422143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 344 - 415
Target Start/End: Original strand, 25855094 - 25855165
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc 415  Q
    ||||||||||| ||||||| ||  |||||||||||| ||||||||||||||||||||||||| |||||||||    
T  25855094 gtcctatttatgagagaaagttgagtcaacaaaagttaatgtatttggactgaatttttaaccaaatacatc 25855165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 344 - 408
Target Start/End: Original strand, 29845656 - 29845720
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaa 408  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||    
T  29845656 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaactaa 29845720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 344 - 411
Target Start/End: Complemental strand, 17236907 - 17236839
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgta-tttggactgaatttttaactaaata 411  Q
    ||||||||||||||| |||||| |||||||||||||  ||||| ||| ||||||||||||||| |||||    
T  17236907 gtcctatttataagaaaaatttgggtcaacaaaagttgatgtattttagactgaatttttaaccaaata 17236839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 50430533 - 50430465
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||| || || |||||||||||||  ||||||||||| |||||||||||| | ||||||||    
T  50430533 tatttataagagcaagttgggtcaacaaaagttgatgtatttggattgaatttttaaccagatacatca 50430465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 4780414 - 4780371
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||||||||||||| ||||||||||||| |||||||    
T  4780414 gtcctatttataagagaaattttggtcaacaaaagttaatgtat 4780371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 325 - 387
Target Start/End: Complemental strand, 24704505 - 24704446
Alignment:
Q  325 agttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||||||| ||   ||||||||||||||| ||| ||||||||||||| |||||||    
T  24704505 agttatactccctccgatc---ctatttataagagaattttgggtcaacaaaagttaatgtat 24704446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 379
Target Start/End: Complemental strand, 42797851 - 42797816
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||| |||||||||||||||||    
T  42797851 gtcctatttataagagaattttaggtcaacaaaagt 42797816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 348 - 418
Target Start/End: Original strand, 31013036 - 31013106
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcatc 418  Q
    ||||||||| ||| |||||| |||||||||||  ||||||||||  | |||| ||||||| ||||||||||    
T  31013036 tatttataaaagacatttagatcaacaaaagtagatgtatttggtttaaattcttaactagatacatcatc 31013106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 5986995 - 5986950
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 389  Q
    |||||||||||||||||| ||| |||||||||||||  ||||||||    
T  5986995 gtcctatttataagagaattttgggtcaacaaaagttgatgtattt 5986950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 344 - 401
Target Start/End: Complemental strand, 6924802 - 6924746
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttt 401  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||||||||| || ||||||    
T  6924802 gtcctatatataaga-aaagttaggtcaacaaaagttaatgtatttggtctaaatttt 6924746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 404
Target Start/End: Original strand, 17344227 - 17344284
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 404  Q
    |||||||||||||||| |||  |||||||||||  |||||| || |||||||||||||    
T  17344227 ctatttataagagaaagttaaatcaacaaaagttgatgtatctgaactgaatttttaa 17344284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 73; Significance: 7e-33; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 49516 - 49588
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49516 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 49588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 344 - 389
Target Start/End: Complemental strand, 49624 - 49579
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 389  Q
    |||||||||||||||||| ||| |||||||||||||  ||||||||    
T  49624 gtcctatttataagagaattttgggtcaacaaaagttgatgtattt 49579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1707 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold1707
Description:

Target: scaffold1707; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 1346 - 1418
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1346 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 1418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0482 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 12871 - 12943
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12871 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 12943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 23796 - 23868
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23796 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 23868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 2e-30; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 54731 - 54659
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  54731 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 54659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 2890281 - 2890209
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2890281 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 2890209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 3304397 - 3304325
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3304397 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 3304325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 6552666 - 6552738
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6552666 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 6552738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 7785897 - 7785825
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7785897 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 7785825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 7805818 - 7805746
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7805818 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 7805746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 12343259 - 12343187
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12343259 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 12343187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 31654624 - 31654696
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31654624 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 31654696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 32114594 - 32114522
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32114594 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 32114522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 43199473 - 43199401
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43199473 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 43199401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 44498306 - 44498234
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44498306 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 44498234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 345 - 414
Target Start/End: Complemental strand, 25601118 - 25601049
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacat 414  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  25601118 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacat 25601049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 12763769 - 12763701
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  12763769 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 12763701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 15888471 - 15888399
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  15888471 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatca 15888399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 32211482 - 32211410
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  32211482 gtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatca 32211410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 39571322 - 39571250
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39571322 gtcctatttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 39571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 7012182 - 7012254
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  7012182 gtcctatttataagagaaatttagatcaacaaaagtgaatatatttggactgaatttttaactagatacatca 7012254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 33289380 - 33289308
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||    
T  33289380 gtcctatttataagagaaatttagatcaacataagtgaatgtatttggactgaatttttaactagatacatca 33289308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 13578871 - 13578940
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||    
T  13578871 ctatttataagagaaatttaggtcaataaaagtgaatgtatttgaactgaatttttaactagatacatca 13578940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 344 - 395
Target Start/End: Complemental strand, 4245700 - 4245649
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4245700 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactg 4245649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 8587181 - 8587253
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||| || |||||||||||||  |||||||| |||| |||||||||||| ||||||||    
T  8587181 gtcctatttataagagaaagtttggtcaacaaaagttgatgtattttgactaaatttttaactagatacatca 8587253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 344 - 401
Target Start/End: Original strand, 28463622 - 28463679
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttt 401  Q
    ||||||||||||||||||| || |||||||||||||  ||||||||||||||||||||    
T  28463622 gtcctatttataagagaaagttgggtcaacaaaagttgatgtatttggactgaatttt 28463679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 27422309 - 27422266
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  27422309 gtcctatttataagagaaatttgggtcaacaaaaatgaatgtat 27422266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 345 - 390
Target Start/End: Original strand, 13246806 - 13246851
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttg 390  Q
    ||||||||||||||||||||| | ||||||||| ||||||||||||    
T  13246806 tcctatttataagagaaatttggatcaacaaaaatgaatgtatttg 13246851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 328 - 387
Target Start/End: Original strand, 25600998 - 25601054
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    ||||||||||||||||   ||||||||||||||| ||| ||||||||||||| |||||||    
T  25600998 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagttaatgtat 25601054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 345 - 401
Target Start/End: Complemental strand, 24692096 - 24692040
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttt 401  Q
    |||||||||||||| ||| ||||||||||||||||  |||||| || ||||||||||    
T  24692096 tcctatttataagaaaaagttaggtcaacaaaagttgatgtatctgaactgaatttt 24692040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 404
Target Start/End: Original strand, 17006923 - 17006982
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 404  Q
    |||||||||||||||||| || |||||||||||||  ||| || ||||||||||| ||||    
T  17006923 tcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaa 17006982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 17570324 - 17570265
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 404  Q
    |||||||||||||||||| || |||||||||||||  ||| || ||||||||||| ||||    
T  17570324 tcctatttataagagaaagttgggtcaacaaaagttgatggatctggactgaattgttaa 17570265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 24203091 - 24203020
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||| ||||| ||||||| || ||||||   | |||||| ||| ||||||||||    
T  24203091 tcctatttataagagaaatttatgtcaataaaagtggatatatttgatttaaattttgaaccaaatacatca 24203020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 54609 - 54658
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  54609 ttatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 54658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 2890160 - 2890208
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  2890160 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 2890208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 2e-30; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 2830346 - 2830418
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2830346 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 2830418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 6330126 - 6330198
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6330126 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 6330198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 8383088 - 8383016
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8383088 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 8383016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 11572264 - 11572192
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11572264 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 11572192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 13853712 - 13853640
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13853712 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 13853640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 26602334 - 26602406
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26602334 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 26602406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 33052913 - 33052841
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33052913 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 33052841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 8099541 - 8099613
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  8099541 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatca 8099613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 35031120 - 35031048
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35031120 gtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 35031048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 345 - 416
Target Start/End: Original strand, 6143566 - 6143637
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  6143566 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatca 6143637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 8417908 - 8417840
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  8417908 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggattgaatttttaactagatacatca 8417840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 9644707 - 9644779
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  9644707 gtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatca 9644779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 9650724 - 9650796
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  9650724 gtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatca 9650796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 6068577 - 6068649
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  6068577 gtcctatttataagaaaaatttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatca 6068649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 349 - 416
Target Start/End: Complemental strand, 28747248 - 28747181
Alignment:
Q  349 atttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||    
T  28747248 atttataagagaaatttagatcaacaaaagtgaatgtatttggactgaatttttaattagatacatca 28747181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 13043772 - 13043841
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||| ||||||||    
T  13043772 ctatttataagagaaatttaggtcaacaaaaatgaatgtatttgaattgaatttttaactagatacatca 13043841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 344 - 406
Target Start/End: Complemental strand, 6069059 - 6068997
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaact 406  Q
    ||||||||||||| ||| |||||||||||||||||| ||||||||||| || |||||||||||    
T  6069059 gtcctatttataaaagatatttaggtcaacaaaagttaatgtatttggtctaaatttttaact 6068997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 363 - 415
Target Start/End: Original strand, 17992018 - 17992070
Alignment:
Q  363 tttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatc 415  Q
    |||||||||| ||||||||||||||||||| |||||||||||||| |||||||    
T  17992018 tttaggtcaataaaagtgaatgtatttggattgaatttttaactagatacatc 17992070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 352 - 390
Target Start/End: Original strand, 6549902 - 6549940
Alignment:
Q  352 tataagagaaatttaggtcaacaaaagtgaatgtatttg 390  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  6549902 tataagagaaatttaggtcaacaaaagttaatgtatttg 6549940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 7597092 - 7597024
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||| ||  || |||||||||  ||||||  | |||||||||||||||||||||||||    
T  7597092 tatttataagagaaagttgtgttaacaaaagttgatgtatccgaactgaatttttaactaaatacatca 7597024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 14936576 - 14936504
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||| |||| ||||||||| |||  |||||||||||   |||| ||||||| ||||||||    
T  14936576 gtcctatttataagagatatttgggtcaacaatagttgatgtatttggaacaaattcttaactagatacatca 14936504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 389
Target Start/End: Complemental strand, 3788169 - 3788111
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 389  Q
    |||||||||||||||| |   |||||||||| ||||||||||||||||||||  ||||||||    
T  3788169 tatactccctccggtctt---atttataagataaatttaggtcaacaaaagttgatgtattt 3788111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 13853590 - 13853639
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  13853590 ttatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 13853639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 6330247 - 6330199
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  6330247 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 6330199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Original strand, 11572143 - 11572191
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  11572143 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 11572191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 344 - 377
Target Start/End: Original strand, 12473651 - 12473684
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaa 377  Q
    ||||||||||||||||||||||||||||| ||||    
T  12473651 gtcctatttataagagaaatttaggtcaataaaa 12473684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 2e-30; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 9395361 - 9395433
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9395361 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 9395433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 23359953 - 23360025
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23359953 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 23360025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 37149074 - 37149002
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37149074 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 37149002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 345 - 416
Target Start/End: Original strand, 11795180 - 11795251
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  11795180 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 11795251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 26350468 - 26350397
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26350468 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 26350397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 36563656 - 36563585
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36563656 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 36563585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 583000 - 583072
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  583000 gtcctatttataagagaaatttaggtcaacataagtgaatgtatttggactgaatttttaactagatacatca 583072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 13033062 - 13033134
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  13033062 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatca 13033134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 13103035 - 13103107
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  13103035 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaaatagatacatca 13103107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 20848085 - 20848157
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  20848085 gtcctatttataagagaaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatca 20848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 41989526 - 41989454
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41989526 gtcctatttgtaagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 41989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 4443971 - 4444043
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||    
T  4443971 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaatttttaaatagatacatca 4444043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 17025635 - 17025707
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||    
T  17025635 gtcctatttataagagaaatttaggtccacaaaagtgaatgtatttaaactgaatttttaactagatacatca 17025707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 37641964 - 37642037
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaa-gtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||| ||||||||    
T  37641964 gtcctatttataagagaaatttaggtcaataaaaagtgaatgtatgtggactgaatttttaactagatacatca 37642037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 357 - 416
Target Start/End: Original strand, 21575970 - 21576029
Alignment:
Q  357 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  21575970 gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatca 21576029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 345 - 404
Target Start/End: Complemental strand, 38361809 - 38361750
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 404  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  38361809 tcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaa 38361750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 416
Target Start/End: Original strand, 6126845 - 6126907
Alignment:
Q  354 taagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  6126845 taagagaaatttagatcaacaaaaatgaatgtatttggactaaatttttaactagatacatca 6126907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 13539982 - 13539914
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||    |||  |||| ||||||||||||||||| ||||||||    
T  13539982 gtcctatttataagagaaatttaggtcaacaaa----aataaatttagactgaatttttaactagatacatca 13539914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 382 - 414
Target Start/End: Original strand, 35904448 - 35904480
Alignment:
Q  382 atgtatttggactgaatttttaactaaatacat 414  Q
    |||||||||||||||||||||||||||||||||    
T  35904448 atgtatttggactgaatttttaactaaatacat 35904480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 966267 - 966224
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||||||||||||| | ||||||||| |||||||||    
T  966267 gtcctatttataagagaaatttggatcaacaaaaatgaatgtat 966224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 350 - 416
Target Start/End: Complemental strand, 2629657 - 2629591
Alignment:
Q  350 tttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||| | |||||||||||||||||| ||||||| ||  || | |||||||||| ||||||||    
T  2629657 tttataagaaatatttaggtcaacaaaagttaatgtatctgatctaattttttaactatatacatca 2629591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 327 - 379
Target Start/End: Complemental strand, 17025757 - 17025708
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  17025757 ttatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 17025708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 347 - 416
Target Start/End: Complemental strand, 3549663 - 3549594
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||| ||||  |||||||||| | ||||||| ||| || ||||||||||  |||||||||    
T  3549663 ctatttataagagatattttagtcaacaaaaattaatgtatctggtctaaatttttaaccgaatacatca 3549594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 344 - 377
Target Start/End: Complemental strand, 11574199 - 11574166
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaa 377  Q
    ||||||||||||||||| ||||||||||||||||    
T  11574199 gtcctatttataagagacatttaggtcaacaaaa 11574166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 345 - 418
Target Start/End: Complemental strand, 27081058 - 27080985
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatcatc 418  Q
    ||||||||| |||||| ||||||||||||||||||  ||||||||   || |||||||||  ||||| ||||||    
T  27081058 tcctatttacaagagacatttaggtcaacaaaagttgatgtatttaatctaaatttttaatcaaataaatcatc 27080985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 2e-30; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 3055569 - 3055641
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3055569 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 3055641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 4684051 - 4683979
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4684051 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 4683979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 13197829 - 13197757
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13197829 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 13197757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 15896853 - 15896925
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15896853 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 15896925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 37990132 - 37990060
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37990132 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 37990060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 41478758 - 41478686
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41478758 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 41478686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 44397558 - 44397630
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44397558 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 44397630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 44398697 - 44398769
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44398697 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 44398769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 15372237 - 15372309
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  15372237 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacgagatacatca 15372309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 16044436 - 16044364
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  16044436 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatca 16044364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 16243902 - 16243830
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16243902 gtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 16243830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 37666729 - 37666657
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  37666729 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgaactgaatttttaactagatacatca 37666657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 347 - 416
Target Start/End: Original strand, 13344498 - 13344567
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  13344498 ctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatca 13344567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 6648638 - 6648566
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  6648638 gtcctatttataagagaaatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatca 6648566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 9047870 - 9047802
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  9047870 tatttataagagaaatttaggtcaaaaaaagtgaatgtatttggactgaatttttaactagatacatca 9047802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 38917641 - 38917569
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  38917641 gtcctatttataagataaatttaggtcaataaaagtgaatgtatttggactgaatttttaactagatacatca 38917569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 41493015 - 41492943
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  41493015 gtcctatttataaaagaaatttaggtcaacaaaagtgaatgtatttggacagaatttttaactagatacatca 41492943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 347 - 416
Target Start/End: Complemental strand, 12338053 - 12337984
Alignment:
Q  347 ctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  12338053 ctatttataagaaaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatca 12337984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 12170517 - 12170446
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||| |||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  12170517 tcctatttacaagagaaaattaggtcaataaaagttaatgtatttggactgaatttttaactaaatacatca 12170446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 345 - 416
Target Start/End: Complemental strand, 30099300 - 30099229
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||    
T  30099300 tcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggattgaatttttaattagatacatca 30099229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 361 - 416
Target Start/End: Complemental strand, 44804680 - 44804625
Alignment:
Q  361 aatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||| || ||||||||||||||||||||||||||||| ||||||||    
T  44804680 aatttaggtcaacataaatgaatgtatttggactgaatttttaactagatacatca 44804625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 352 - 416
Target Start/End: Original strand, 16734802 - 16734866
Alignment:
Q  352 tataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||| || |||||||||||||  |||||| ||||||||||||||||| ||||||||||    
T  16734802 tataagagaaagtttggtcaacaaaagttgatgtatctggactgaatttttaaccaaatacatca 16734866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 345 - 413
Target Start/End: Original strand, 31150665 - 31150733
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaataca 413  Q
    |||||||||||||||||| ||  ||||||||||||  ||||||||||||| |||||||||||| |||||    
T  31150665 tcctatttataagagaaagttgcgtcaacaaaagtttatgtatttggactaaatttttaactagataca 31150733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 364 - 416
Target Start/End: Original strand, 41453090 - 41453142
Alignment:
Q  364 ttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  41453090 ttaggtcaataaaagttaatgtatttggactgaatttttaacaaaatacatca 41453142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 348 - 404
Target Start/End: Complemental strand, 4553125 - 4553069
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaa 404  Q
    ||||||||||||||| || ||||||||||| |  ||||||||||| |||||||||||    
T  4553125 tatttataagagaaagtttggtcaacaaaaatagatgtatttggattgaatttttaa 4553069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 379
Target Start/End: Original strand, 41492895 - 41492942
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||||||| |||||||||||||    
T  41492895 atactccctccggtc---ctatttataagagaaatttgggtcaacaaaagt 41492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 391
Target Start/End: Complemental strand, 23227391 - 23227344
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttgg 391  Q
    ||||||||||||||||| |||| |||||||||||||  ||||||||||    
T  23227391 gtcctatttataagagacattttggtcaacaaaagttgatgtatttgg 23227344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 327 - 379
Target Start/End: Original strand, 38917519 - 38917568
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  38917519 ttatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 38917568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 44398818 - 44398770
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  44398818 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 44398770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 2e-30; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 9981658 - 9981730
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  9981658 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 9981730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 14984848 - 14984920
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  14984848 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 14984920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 26471184 - 26471112
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26471184 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 26471112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 27159477 - 27159405
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27159477 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 27159405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 31842914 - 31842842
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31842914 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 31842842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 39402085 - 39402013
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39402085 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 39402013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 44668212 - 44668140
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44668212 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 44668140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 47216818 - 47216746
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47216818 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 47216746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 1050899 - 1050971
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  1050899 gtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatca 1050971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 11795944 - 11796016
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  11795944 gtcctatttataagagaaatttaggtcaacaaaagtgaatgcatttggactgaatttttaactagatacatca 11796016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 12483747 - 12483675
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||    
T  12483747 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttagactgaattttgaactaaatacatca 12483675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 23278120 - 23278048
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  23278120 gtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatca 23278048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 34042707 - 34042779
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  34042707 gtcctatttataagagaaatttaggtcaacaaaaatgaatgtatttggactgaatttttaactagatacatca 34042779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 44955325 - 44955253
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44955325 gtcctatttataagaaaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactagatacatca 44955253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 47777600 - 47777528
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  47777600 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaattttgaactagatacatca 47777528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 47588452 - 47588384
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  47588452 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaattagatacatca 47588384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 345 - 416
Target Start/End: Original strand, 25694331 - 25694402
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  25694331 tcctatttataagagaaatttagatcaataaaagtgaatgtatttggattgaatttttaactagatacatca 25694402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 17556763 - 17556836
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaag-tgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||| ||||||||    
T  17556763 gtcctatttataagagaaagttaggtcaacaaaagttaaatgtatttggactgaatttttaactagatacatca 17556836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 344 - 416
Target Start/End: Original strand, 47969705 - 47969778
Alignment:
Q  344 gtcctatttataa-gagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  47969705 gtcctatttataaagagaaatttaggtcaacaaaagtaaatgtatttagactgaatttttaactagatacatca 47969778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 329 - 405
Target Start/End: Original strand, 11897053 - 11897126
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaac 405  Q
    |||||||||||||||   |||||||||||||||| ||||||||||||||||  |||||| || ||||||||||||||    
T  11897053 atactccctccggtc---ctatttataagagaaagttaggtcaacaaaagttgatgtatctgaactgaatttttaac 11897126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 327 - 414
Target Start/End: Complemental strand, 16448241 - 16448157
Alignment:
Q  327 ttatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacat 414  Q
    |||||||||||||||||   |||||||||||||||| || |||||||||||||  |||||| ||||||||||||| ||| | ||||||    
T  16448241 ttatactccctccggtc---ctatttataagagaaagttgggtcaacaaaagttgatgtatctggactgaattttgaaccagatacat 16448157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 348 - 416
Target Start/End: Original strand, 11989796 - 11989864
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||| || |||||||||||   ||| ||||||||||||||||||||| ||||||||||    
T  11989796 tatttataagagaaagttgggtcaacaaaaactaatatatttggactgaatttttaaccaaatacatca 11989864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 348 - 416
Target Start/End: Complemental strand, 12213589 - 12213521
Alignment:
Q  348 tatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    ||||||||||||||  |||||||||||||| | ||||||||| || |||||||||||||||||| ||||    
T  12213589 tatttataagagaatgttaggtcaacaaaaattaatgtatttagattgaatttttaactaaataaatca 12213521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 344 - 387
Target Start/End: Complemental strand, 37552260 - 37552217
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtat 387  Q
    |||||||||||||||||||||| ||||||||||| |||||||||    
T  37552260 gtcctatttataagagaaatttgggtcaacaaaaatgaatgtat 37552217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 379
Target Start/End: Complemental strand, 11897185 - 11897138
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||   ||||||||||||||||||| |||||||||||||    
T  11897185 atactccctccggtc---ctatttataagagaaatttgggtcaacaaaagt 11897138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 379
Target Start/End: Original strand, 44955217 - 44955252
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    |||||||||||||||||| |||||||||||||||||    
T  44955217 gtcctatttataagagaattttaggtcaacaaaagt 44955252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 329 - 389
Target Start/End: Original strand, 12483627 - 12483684
Alignment:
Q  329 atactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtattt 389  Q
    |||||||||||||||   ||||||||||||||| ||| |||||||||||||  ||||||||    
T  12483627 atactccctccggtc---ctatttataagagaattttgggtcaacaaaagttgatgtattt 12483684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 344 - 414
Target Start/End: Original strand, 37552152 - 37552222
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacat 414  Q
    ||||||||||||||| ||| ||  |||||||| |||  |||||| ||||||||||||||||| | ||||||    
T  37552152 gtcctatttataagataaagttgagtcaacaacagttcatgtatctggactgaatttttaaccagatacat 37552222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 25694451 - 25694403
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagt 379  Q
    ||||||||||||||||   ||||||||||||||| ||| |||||||||||||    
T  25694451 tatactccctccggtc---ctatttataagagaattttgggtcaacaaaagt 25694403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 344 - 416
Target Start/End: Complemental strand, 6250 - 6178
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  6250 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatgtggactgaatttttaactagatacatca 6178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 344 - 408
Target Start/End: Complemental strand, 13845 - 13781
Alignment:
Q  344 gtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaa 408  Q
    |||||| ||||||||||||||||||||||||||| | ||| |||||| |||||||||||||||||    
T  13845 gtcctacttataagagaaatttaggtcaacaaaaattaatatatttgaactgaatttttaactaa 13781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 432 - 516
Target Start/End: Complemental strand, 2310 - 2221
Alignment:
Q  432 caaacaagaataaaatagaggacaataaaacaacaa-----atactcactcaaaaattgatggtcgtgaaagtagaactcacatgaagaa 516  Q
    ||||||||||||||| ||| ||||||||||||||||     | |  |||| |||||||||||||||||||||| |||||||| |||||||    
T  2310 caaacaagaataaaaaagaagacaataaaacaacaacagagaaaaacactaaaaaattgatggtcgtgaaagtggaactcacgtgaagaa 2221  T

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Target: scaffold0650 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 416
Target Start/End: Complemental strand, 116 - 32
Alignment:
Q  328 tatactccctccggtcgtcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaactaaatacatca 416  Q
    |||||||||||||||    ||||||||| ||||||  | |||||||||||||  ||||||||||||| |||||||||| ||||||||||    
T  116 tatactccctccggtt---ctatttata-gagaaagattggtcaacaaaagttgatgtatttggactaaatttttaaccaaatacatca 32  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 345 - 407
Target Start/End: Complemental strand, 231421 - 231359
Alignment:
Q  345 tcctatttataagagaaatttaggtcaacaaaagtgaatgtatttggactgaatttttaacta 407  Q
    ||||| |||||||||||| || | |||||||||||  |||||| ||||||||||||| |||||    
T  231421 tcctaattataagagaaagttggatcaacaaaagtttatgtatctggactgaattttgaacta 231359  T

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