View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4461-Insertion-9 (Length: 367)
Name: NF4461-Insertion-9
Description: NF4461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4461-Insertion-9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 7 - 367
Target Start/End: Original strand, 28987193 - 28987554
Alignment:
| Q |
7 |
agatagacccctggcctgtggacatccaaaaaccacgctattttgttcacaatgtaattttgctgtctaaaatatccattcaactatgggttcaaattac |
106 |
Q |
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| T |
28987193 |
agatagacccctggcctgtggacatccaaaaaccacgctattttgttcacaatgtaattttgctatctaaaatatccattcaactatgggttcaaattac |
28987292 |
T |
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| Q |
107 |
caaattgcacacagaacttatcatattaattttcattcgtgaagttaaaaatag-aacatgaagtgcaataccgtaaaattacaagcccaacaaaaaatt |
205 |
Q |
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| T |
28987293 |
caaatcgcatatagaacttatcatattaattttcatccgtgaagttaaaaatagcaacatgaagtgcaagatcgtaaaattacaagcccaacaaaaaatt |
28987392 |
T |
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| Q |
206 |
tgttacattcttgtttagtaaatgtaattaactaacaaatataaaaagcgtaacatttgtcttcctcttaattctaaccggggctctcggcaacacgagt |
305 |
Q |
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| T |
28987393 |
tgttacattcttgtttagtaaatgtaattaactaacaaatataaaaagcgtaacatttgtcttcctcttaattctaaccggggctctcggcaacaagagt |
28987492 |
T |
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| Q |
306 |
ccccaagaatctcataatgcatacattcccattcttcattgttcttctaatcttcatctttt |
367 |
Q |
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| T |
28987493 |
ccccaagaatctcataatgcatacattctcattcttcattgttcttctaatcttcatctttt |
28987554 |
T |
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