View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4462-Insertion-5 (Length: 399)
Name: NF4462-Insertion-5
Description: NF4462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4462-Insertion-5 |
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Alignment Details
Target: chr7 (Bit Score: 379; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 379; E-Value: 0
Query Start/End: Original strand, 11 - 393
Target Start/End: Complemental strand, 36887200 - 36886818
Alignment:
| Q |
11 |
cctcactgggagtctatgcaggctttataatctccgaaatttgaaacagctgtgagtgtttttgattttgcaaggcattagtattagattcttatatcag |
110 |
Q |
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| T |
36887200 |
cctcactgggagtctatgcaggctttataatctccgaaatttgaaacagctgtgagtgtttttgattttgcaaggcattagtattagattcttatatcag |
36887101 |
T |
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| Q |
111 |
gatatgtgaatttcaagttatgctattaattaacttgtttccatatttttggtttttgtagggatgtcagttctaataacatagtgggcgaaatgccgtt |
210 |
Q |
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| T |
36887100 |
gatatgtgaatttcaagttatgctattaattaacttgtttccatatttttggtttttgtagggatgtcagttctaataacatagtgggcgaaatgccgtt |
36887001 |
T |
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| Q |
211 |
tggtttaccccccaatgtcacacatatgtaaggcaactgttcttctcattttgttcactgcataactgaattttgtgcttgctgataggcatacttctat |
310 |
Q |
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| T |
36887000 |
tggtttaccccccaatgtcacacatatgtaaggcaactgttcttctcattttgttcactgcataactgaattttgtgcttgctgataggcatacttctat |
36886901 |
T |
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| Q |
311 |
ctttagcactgtgtttttcttgggattatttcaatgcagacagaatgcttgctttcttgtaactatttgagcaaaattattcc |
393 |
Q |
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| T |
36886900 |
ctttagcactgtgtttttcttgtgattatttcaatgcagacagaatgcttgctttcttgtaactatttgagcaaaattattcc |
36886818 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 252
Target Start/End: Complemental strand, 22557219 - 22557140
Alignment:
| Q |
173 |
gatgtcagttctaataacatagtgggcgaaatgccgtttggtttaccccccaatgtcacacatatgtaaggcaactgttc |
252 |
Q |
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| T |
22557219 |
gatgtcagttccaacagcataatgggtgaaattccatatggattaccccccaatgccacacatatgtaagcctactgttc |
22557140 |
T |
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