View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4462-Insertion-6 (Length: 362)
Name: NF4462-Insertion-6
Description: NF4462
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4462-Insertion-6 |
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Alignment Details
Target: chr2 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 8 - 346
Target Start/End: Complemental strand, 34261344 - 34261006
Alignment:
| Q |
8 |
tataggtggctatagattgaaccaacactaacaagattcaaataacttgatcagtaagttacagggtaaatactaagttgagtgttggggatgtaatatg |
107 |
Q |
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| T |
34261344 |
tataggtggctatagattgaaccaacactaacaagactcaaataacttgatcagtaagttacagggtaaatactaagttgagtgttggggatgtaatatg |
34261245 |
T |
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| Q |
108 |
tgaagttttgtagagcctaaactgatggagactgagagattccgtgacctgttcttttctgttgtagcaggtctcgactatcatcaatcggtcaatttgg |
207 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34261244 |
tgaagttttgtagagcctaaactgatggaggctgagagattccgcgacctgttcttttctgttgtagcaggtctcgactatcatcaatcggtcaatttgg |
34261145 |
T |
|
| Q |
208 |
ccatggtcttgacttatggtggagtagtaacatggtagttttgattctgatattgagggtccaatcctaattcttcatcgagccagtgtagatttgacag |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||| |
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| T |
34261144 |
ccatggtcttgacttatggtggagtagtaacatggtagttttgatttcgatattgaggatccaatcctaattcttcatcgagccagtatagatttgacag |
34261045 |
T |
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| Q |
308 |
ggtggaatttggctactggttgtcttggtggtagcactg |
346 |
Q |
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| T |
34261044 |
ggtggaatttggctactggttgtcttggtggtggcactg |
34261006 |
T |
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