View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4463_high_4 (Length: 210)
Name: NF4463_high_4
Description: NF4463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4463_high_4 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 3 - 201
Target Start/End: Complemental strand, 25595064 - 25594866
Alignment:
| Q |
3 |
gggtcatcgtgacggtgacggaatcaaaactgagaacggtgttttaacgtaacggtgacggaattgatcggagtgttcgtgtaaataagttcgcgggaag |
102 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25595064 |
gggtcatcgtgacggtgacggaatcgaaactgagaacggtgttttaacgtaacggtgacggaattgatcggagtgttcgtgtaaataagttcgcgggaag |
25594965 |
T |
|
| Q |
103 |
aatgtctagatgcttcgaggctttatatgctgtcgttgtatgacgtggcactttgatgtgtcaccacgcatactgaccaatcatatttcagagtttctt |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25594964 |
aatgtctagatgcttcgaggctttatatgctgtcgttgtatgacgtggcactttgatgtgtcaccacgcatactgaccaatcatatttcagagtttctt |
25594866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University