View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4464-Insertion-10 (Length: 628)
Name: NF4464-Insertion-10
Description: NF4464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4464-Insertion-10 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 613; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 613; E-Value: 0
Query Start/End: Original strand, 8 - 628
Target Start/End: Original strand, 25741108 - 25741728
Alignment:
| Q |
8 |
cttaggtggtgatgttgatggtggtagcaacggcaccgcgaatggtaactcggttcgacaatgataacaaatgcttccaaaaccttgacaaagaaaatca |
107 |
Q |
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| T |
25741108 |
cttaggtggtgatgttgatggtggtagcaacggcaccgcgaatggtaactcggttcgacaatcataacaaatgcttccaaaaccttgacaaagaaaatca |
25741207 |
T |
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| Q |
108 |
gaatttggatacacaccacaagtgctacatgaatcactaacacatggaccaggaagaatcattcccaatggaacattaacatcctcattagtattacccc |
207 |
Q |
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| T |
25741208 |
gaatttggatacacaccacaagtgctacatgaatcactaacacatggaccaggaagaatcattcccaatggaacattaacatcctcattagtattacccc |
25741307 |
T |
|
| Q |
208 |
aacaaataagagacaaatttttaatactcaaaccacaaacaaaatccaaaccagcaacaattgactcaaaagaaacacttttcatcatcacatgattatt |
307 |
Q |
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| T |
25741308 |
aacaaataagagacaaatttttaatactcaaaccacaaacaaaatccaaaccagcaacaattgactcaaaagaaacacttttcatcatcacatgattatt |
25741407 |
T |
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| Q |
308 |
cacaccaccactatcaaataaaccaccccaacatagaacaaatccattcttttttctaataccacaagtgaaattttttcctaaagcaagacctgaaaaa |
407 |
Q |
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| T |
25741408 |
cacaccaccactatcaaataaaccaccccaacatagaacaaatccattcttttttctaataccacaagtgaaattttttcctaaagcaagacctgaaaaa |
25741507 |
T |
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| Q |
408 |
actgaaccagaattcaaaggaacatttagcttaccagaatcattgttcttctcacctttacaaaccaaaactctatcaagagttaaaccacaaacatgtg |
507 |
Q |
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| T |
25741508 |
actgaaccagaattcaaaggaacatttagcttaccagaatcattgttcttctcacctttacaaaccaaaactttatcaagagttaaaccacaaacatgtg |
25741607 |
T |
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| Q |
508 |
acacaccagcaaccaatgttgacattgataaattcccaaactgtttctgaatctctttttcaacaccctttttaccatttacaccccaacaaaaaacttt |
607 |
Q |
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| T |
25741608 |
acacaccagcaaccaatgttgacattgataaattcccaaactgtttctgaatctctttttcaacaccctttttaccatttacaccccaacaaaaaacttt |
25741707 |
T |
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| Q |
608 |
actattctccttcaatatccc |
628 |
Q |
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| T |
25741708 |
actattctccttcaatatccc |
25741728 |
T |
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