View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4464_high_34 (Length: 240)
Name: NF4464_high_34
Description: NF4464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4464_high_34 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 9 - 213
Target Start/End: Complemental strand, 4395274 - 4395068
Alignment:
| Q |
9 |
agcacagatatctgaagtcattctcatgagcagtgttcttctataaacctctattgaataataaccctaatagcaaacacaatagtacaatgacataata |
108 |
Q |
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| T |
4395274 |
agcacagatatctgaagtcattctcatgagcagtgttcttctataaacctctattgaataataaccctaatagcaaacacaatagtacattgacataata |
4395175 |
T |
|
| Q |
109 |
taacagaaagaagaaatcagcaagtcatcaaaatagacaacaaccaaataaaacaccatacattaaaacctcat--cactctccagcattttctttccta |
206 |
Q |
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|||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
4395174 |
taacagaaagaaaaaatcagcaagtcatcaaaatagacaacaaccaaataaaataccatacattaaaacctcatcacactctccagcattttctttccta |
4395075 |
T |
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| Q |
207 |
catctgc |
213 |
Q |
| |
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||||||| |
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| T |
4395074 |
catctgc |
4395068 |
T |
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