View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4464_high_44 (Length: 227)

Name: NF4464_high_44
Description: NF4464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4464_high_44
NF4464_high_44
[»] chr2 (14 HSPs)
chr2 (1-227)||(15070443-15070669)
chr2 (191-227)||(5958966-5959002)
chr2 (191-227)||(6974570-6974606)
chr2 (191-227)||(21423365-21423401)
chr2 (191-227)||(24475985-24476021)
chr2 (187-227)||(30393645-30393685)
chr2 (191-227)||(37060132-37060168)
chr2 (191-227)||(37140187-37140223)
chr2 (192-227)||(10217408-10217443)
chr2 (192-227)||(27004450-27004485)
chr2 (197-227)||(4382213-4382243)
chr2 (191-227)||(13274201-13274237)
chr2 (191-227)||(28107541-28107577)
chr2 (191-227)||(37802889-37802925)
[»] chr3 (8 HSPs)
chr3 (189-227)||(45602982-45603020)
chr3 (191-227)||(14201717-14201753)
chr3 (191-227)||(37115940-37115976)
chr3 (192-227)||(39391958-39391993)
chr3 (194-227)||(36404275-36404308)
chr3 (191-227)||(35534482-35534518)
chr3 (191-227)||(52742352-52742388)
chr3 (191-227)||(46487270-46487305)
[»] chr8 (13 HSPs)
chr8 (190-227)||(4414225-4414262)
chr8 (191-227)||(4623903-4623939)
chr8 (191-227)||(22798541-22798577)
chr8 (189-227)||(21567705-21567743)
chr8 (190-227)||(3001430-3001467)
chr8 (194-227)||(23275580-23275613)
chr8 (194-227)||(23403601-23403634)
chr8 (194-227)||(30204701-30204734)
chr8 (191-227)||(4234178-4234214)
chr8 (191-227)||(16655978-16656014)
chr8 (191-227)||(37630002-37630038)
chr8 (192-227)||(14842309-14842344)
chr8 (192-227)||(45310068-45310103)
[»] chr5 (16 HSPs)
chr5 (190-227)||(2068962-2068999)
chr5 (191-227)||(3729386-3729422)
chr5 (191-227)||(9793785-9793821)
chr5 (191-227)||(41929341-41929377)
chr5 (192-227)||(3711183-3711218)
chr5 (192-227)||(39508369-39508404)
chr5 (189-227)||(8159123-8159161)
chr5 (193-227)||(9793688-9793722)
chr5 (194-227)||(21020686-21020719)
chr5 (195-227)||(21583853-21583885)
chr5 (191-227)||(25081767-25081803)
chr5 (191-227)||(25139736-25139772)
chr5 (191-227)||(34766937-34766973)
chr5 (192-227)||(9913803-9913838)
chr5 (192-225)||(20736213-20736246)
chr5 (191-219)||(38451089-38451117)
[»] scaffold0306 (1 HSPs)
scaffold0306 (191-227)||(13109-13145)
[»] scaffold0152 (1 HSPs)
scaffold0152 (191-227)||(22182-22218)
[»] chr4 (8 HSPs)
chr4 (191-227)||(35929707-35929743)
chr4 (192-227)||(53584619-53584654)
chr4 (192-227)||(56100191-56100226)
chr4 (193-227)||(12701040-12701074)
chr4 (189-227)||(19598365-19598403)
chr4 (193-227)||(21555382-21555416)
chr4 (192-227)||(41842789-41842824)
chr4 (191-227)||(36609466-36609503)
[»] chr1 (13 HSPs)
chr1 (191-227)||(6750363-6750399)
chr1 (191-227)||(39001947-39001983)
chr1 (192-227)||(9224877-9224912)
chr1 (194-227)||(571650-571683)
chr1 (191-227)||(3695406-3695442)
chr1 (191-227)||(26653993-26654029)
chr1 (191-227)||(41998932-41998968)
chr1 (192-227)||(794914-794949)
chr1 (192-221)||(44272417-44272446)
chr1 (191-227)||(1585860-1585896)
chr1 (191-227)||(4792621-4792657)
chr1 (199-227)||(11121865-11121893)
chr1 (191-227)||(24909561-24909597)
[»] scaffold0532 (1 HSPs)
scaffold0532 (192-227)||(11320-11355)
[»] chr6 (7 HSPs)
chr6 (192-227)||(1067801-1067836)
chr6 (194-227)||(2814943-2814976)
chr6 (194-227)||(24640405-24640438)
chr6 (194-227)||(26394042-26394075)
chr6 (191-227)||(6200215-6200251)
chr6 (191-227)||(12324172-12324208)
chr6 (192-227)||(444522-444557)
[»] chr7 (3 HSPs)
chr7 (189-227)||(8163696-8163734)
chr7 (189-227)||(40337119-40337157)
chr7 (192-227)||(41326042-41326077)
[»] scaffold0140 (1 HSPs)
scaffold0140 (191-227)||(21476-21512)
[»] scaffold1248 (1 HSPs)
scaffold1248 (193-227)||(970-1004)
[»] scaffold0952 (1 HSPs)
scaffold0952 (193-227)||(1309-1343)
[»] scaffold0302 (1 HSPs)
scaffold0302 (191-227)||(18556-18592)
[»] scaffold0025 (1 HSPs)
scaffold0025 (191-227)||(67872-67908)


Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 15070669 - 15070443
Alignment:
Q  1 tttatccttgaagttgcctttttcttctttacttattacagttttcactttcttgcaattttggtctcaaaatgctaatttaaccatgaactcgaatata 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15070669 tttatccttgaagttgcctttttcttctttacttattacggttttcactttcttgcaattttggtctcaaaatgctaatttaaccatgaactcgaatata 15070570  T
Q  101 cccaatcacataacccgagatccatccaactcacaatccgttgatagggatgctttgaatggttgaaaatggatcagaatccctttgggtctgtttgaaa 200  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||  ||||||    
T  15070569 tccaatcacataacccgagatccatccaactcacaatccgttgatagggatgctttgaatggttgaaaatggatcagaatccttttgggactaattgaaa 15070470  T
Q  201 tagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||    
T  15070469 tagtttttgttttcagtttttgaaata 15070443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 5958966 - 5959002
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  5958966 ctgtttgaaatagtttttgttttcagtttttgaaata 5959002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 6974606 - 6974570
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  6974606 ctgtttgaaatagtttttgttttcagtttttgaaata 6974570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 21423365 - 21423401
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  21423365 ctgtttgaaatagtttttgttttcagtttttgaaata 21423401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 24476021 - 24475985
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  24476021 ctgtttgaaatagtttttgttttcagtttttgaaata 24475985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 30393685 - 30393645
Alignment:
Q  187 gggtctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  30393685 gggtttgtttgaaatagtttttgttttcagtttttgaaata 30393645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 37060168 - 37060132
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  37060168 ctgtttgaaatagtttttgttttcagtttttgaaata 37060132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 37140223 - 37140187
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  37140223 ctgtttgaaatagtttttgttttcagtttttgaaata 37140187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 10217443 - 10217408
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10217443 tgtttgaaatagtttttattttcagtttttgaaata 10217408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 27004450 - 27004485
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||| |||||||||||    
T  27004450 tgtttgaaatagtttttgttttcaatttttgaaata 27004485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 227
Target Start/End: Original strand, 4382213 - 4382243
Alignment:
Q  197 gaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||    
T  4382213 gaaatagtttttgttttcagtttttgaaata 4382243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 13274201 - 13274237
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||| | |||||||||||    
T  13274201 ctgtttgaaatagtttttgtttttaatttttgaaata 13274237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 28107577 - 28107541
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||| | ||||||||||||||||||||||||    
T  28107577 ctgtttgaaacaatttttgttttcagtttttgaaata 28107541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 37802925 - 37802889
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||| | |||||||||||    
T  37802925 ctgtttgaaatagtttttgttttaaatttttgaaata 37802889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 45602982 - 45603020
Alignment:
Q  189 gtctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||||    
T  45602982 gtctgtttgaaatagtttttgttttcagtttttgaaata 45603020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 14201717 - 14201753
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  14201717 ctgtttgaaatagtttttgttttcagtttttgaaata 14201753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 37115976 - 37115940
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  37115976 ctgtttgaaatagtttttgttttcagtttttgaaata 37115940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 39391958 - 39391993
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  39391958 tgtttgaaatagtttttgttttcagtttttgaaata 39391993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 36404308 - 36404275
Alignment:
Q  194 tttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||    
T  36404308 tttgaaatagtttttgttttcagtttttgaaata 36404275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 35534482 - 35534518
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||| ||||||||||||||||||||||||||||||    
T  35534482 ctgtttaaaatagtttttgttttcagtttttgaaata 35534518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 52742352 - 52742388
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||| ||||||||||||||    
T  52742352 ctgtttgaaatagtttttgtttccagtttttgaaata 52742388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 46487270 - 46487305
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||| ||||||||||||||||||    
T  46487270 ctgtttgaaatagttttt-ttttcagtttttgaaata 46487305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000001; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 4414225 - 4414262
Alignment:
Q  190 tctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||||||    
T  4414225 tctgtttgaaatagtttttgttttcagtttttgaaata 4414262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 4623939 - 4623903
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  4623939 ctgtttgaaatagtttttgttttcagtttttgaaata 4623903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 22798541 - 22798577
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  22798541 ctgtttgaaatagtttttgttttcagtttttgaaata 22798577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 21567705 - 21567743
Alignment:
Q  189 gtctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  21567705 gtctgtttgaaatagtttttgttttcagttttagaaata 21567743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 227
Target Start/End: Complemental strand, 3001467 - 3001430
Alignment:
Q  190 tctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  3001467 tctgtttgaaatagtttttattttcagtttttgaaata 3001430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 23275613 - 23275580
Alignment:
Q  194 tttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||    
T  23275613 tttgaaatagtttttgttttcagtttttgaaata 23275580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 23403601 - 23403634
Alignment:
Q  194 tttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||    
T  23403601 tttgaaatagtttttgttttcagtttttgaaata 23403634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 30204734 - 30204701
Alignment:
Q  194 tttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||    
T  30204734 tttgaaatagtttttgttttcagtttttgaaata 30204701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 4234178 - 4234214
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||| ||||||||||||||||||||||||||||||    
T  4234178 ctgtttaaaatagtttttgttttcagtttttgaaata 4234214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 16655978 - 16656014
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||| |||||    
T  16655978 ctgtttgaaatagtttttgttttcagtttttaaaata 16656014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 37630002 - 37630038
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||| |||||    
T  37630002 ctgtttgaaatagtttttgttttcagttttttaaata 37630038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 14842309 - 14842344
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14842309 tgtttgaaataatttttgttttcagtttttgaaata 14842344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 45310103 - 45310068
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||| |||||||||||    
T  45310103 tgtttgaaatagtttttgttttcaatttttgaaata 45310068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000001; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 2068962 - 2068999
Alignment:
Q  190 tctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||||||    
T  2068962 tctgtttgaaatagtttttgttttcagtttttgaaata 2068999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 3729422 - 3729386
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  3729422 ctgtttgaaatagtttttgttttcagtttttgaaata 3729386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 9793821 - 9793785
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  9793821 ctgtttgaaatagtttttgttttcagtttttgaaata 9793785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 41929341 - 41929377
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  41929341 ctgtttgaaatagtttttgttttcagtttttgaaata 41929377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 3711183 - 3711218
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  3711183 tgtttgaaatagtttttgttttcagtttttgaaata 3711218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 39508404 - 39508369
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  39508404 tgtttgaaatagtttttgttttcagtttttgaaata 39508369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 8159161 - 8159123
Alignment:
Q  189 gtctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  8159161 gtctgtttgaaatagtttttgttttcaatttttgaaata 8159123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 9793722 - 9793688
Alignment:
Q  193 gtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||    
T  9793722 gtttgaaatagtttttgttttcagtttttgaaata 9793688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 21020686 - 21020719
Alignment:
Q  194 tttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||    
T  21020686 tttgaaatagtttttgttttcagtttttgaaata 21020719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 21583853 - 21583885
Alignment:
Q  195 ttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||    
T  21583853 ttgaaatagtttttgttttcagtttttgaaata 21583885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 25081767 - 25081803
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25081767 ctgtttgaaatagtttttgttttcaggttttgaaata 25081803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 25139736 - 25139772
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||| ||||||||||    
T  25139736 ctgtttgaaatagtttttgttttcaggttttgaaata 25139772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 34766973 - 34766937
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||| |||||||||||    
T  34766973 ctgtttgaaatagtttttgttttcaatttttgaaata 34766937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 9913803 - 9913838
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||| |||||||||||||    
T  9913803 tgtttgaaatagtttttgtttttagtttttgaaata 9913838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 20736246 - 20736213
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaa 225  Q
    |||||||||||||||||||||||| |||||||||    
T  20736246 tgtttgaaatagtttttgttttcaatttttgaaa 20736213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 219
Target Start/End: Complemental strand, 38451117 - 38451089
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagttt 219  Q
    |||||||||||||||||||||||||||||    
T  38451117 ctgtttgaaatagtttttgttttcagttt 38451089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 13145 - 13109
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  13145 ctgtttgaaatagtttttgttttcagtttttgaaata 13109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 22182 - 22218
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  22182 ctgtttgaaatagtttttgttttcagtttttgaaata 22218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000005; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 35929707 - 35929743
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  35929707 ctgtttgaaatagtttttgttttcagtttttgaaata 35929743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 53584654 - 53584619
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  53584654 tgtttgaaatagtttttgttttcagtttttgaaata 53584619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 56100226 - 56100191
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  56100226 tgtttgaaatagtttttgttttcagtttttgaaata 56100191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 12701040 - 12701074
Alignment:
Q  193 gtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||    
T  12701040 gtttgaaatagtttttgttttcagtttttgaaata 12701074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 19598365 - 19598403
Alignment:
Q  189 gtctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  19598365 gtctgtttgaaatagtttttgttttcagttttcgaaata 19598403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 21555382 - 21555416
Alignment:
Q  193 gtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||    
T  21555382 gtttgaaatagtttttgttttcagtttttgaaata 21555416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 41842789 - 41842824
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||| ||||||||||||    
T  41842789 tgtttgaaatagtttttgttttcggtttttgaaata 41842824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 36609503 - 36609466
Alignment:
Q  191 ctgtttgaaatagtttttg-ttttcagtttttgaaata 227  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  36609503 ctgtttgaaatagtttttgtttttcagtttttgaaata 36609466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.000000000005; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 6750399 - 6750363
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  6750399 ctgtttgaaatagtttttgttttcagtttttgaaata 6750363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 39001947 - 39001983
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||||||||    
T  39001947 ctgtttgaaatagtttttgttttcagtttttgaaata 39001983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Complemental strand, 9224912 - 9224877
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  9224912 tgtttgaaatagtttttgttttcagtttttgaaata 9224877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Original strand, 571650 - 571683
Alignment:
Q  194 tttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||    
T  571650 tttgaaatagtttttgttttcagtttttgaaata 571683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 3695406 - 3695442
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||| ||||||||||||    
T  3695406 ctgtttgaaatagtttttgttttcggtttttgaaata 3695442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 26654029 - 26653993
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||| |||||||||||    
T  26654029 ctgtttgaaatagtttttgttttcaatttttgaaata 26653993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 41998968 - 41998932
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||| |||||||||||    
T  41998968 ctgtttgaaatagtttttgttttcattttttgaaata 41998932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 794914 - 794949
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||| ||||||||||||||||||||||||    
T  794914 tgtttgaaatattttttgttttcagtttttgaaata 794949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 221
Target Start/End: Complemental strand, 44272446 - 44272417
Alignment:
Q  192 tgtttgaaatagtttttgttttcagttttt 221  Q
    ||||||||||||||||||||||||||||||    
T  44272446 tgtttgaaatagtttttgttttcagttttt 44272417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 1585860 - 1585896
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||| |||||| |||||||||||||    
T  1585860 ctgtttgaaatagtttatgtttttagtttttgaaata 1585896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 4792657 - 4792621
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||| |||||||||||||||| |||||||||||||    
T  4792657 ctgtttaaaatagtttttgtttttagtttttgaaata 4792621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 227
Target Start/End: Original strand, 11121865 - 11121893
Alignment:
Q  199 aatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||    
T  11121865 aatagtttttgttttcagtttttgaaata 11121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 24909597 - 24909561
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||| |||||||||||| |||||    
T  24909597 ctgtttgaaatagtttttattttcagtttttaaaata 24909561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 11320 - 11355
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  11320 tgtttgaaatagtttttgttttcagtttttgaaata 11355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 1067801 - 1067836
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||||    
T  1067801 tgtttgaaatagtttttgttttcagtttttgaaata 1067836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 2814976 - 2814943
Alignment:
Q  194 tttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||    
T  2814976 tttgaaatagtttttgttttcagtttttgaaata 2814943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 24640438 - 24640405
Alignment:
Q  194 tttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||    
T  24640438 tttgaaatagtttttgttttcagtttttgaaata 24640405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 227
Target Start/End: Complemental strand, 26394075 - 26394042
Alignment:
Q  194 tttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||||||||    
T  26394075 tttgaaatagtttttgttttcagtttttgaaata 26394042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 6200251 - 6200215
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||| ||||||||||||||||||||||||    
T  6200251 ctgtttgaaatattttttgttttcagtttttgaaata 6200215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 12324172 - 12324208
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||| |||||||||||||||||||||||||||    
T  12324172 ctgtttgaagtagtttttgttttcagtttttgaaata 12324208  T

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Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 444522 - 444557
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||| ||||||||||||||||||||||||||||||    
T  444522 tgtttaaaatagtttttgttttcagtttttgaaata 444557  T

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Target: chr7 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 8163734 - 8163696
Alignment:
Q  189 gtctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  8163734 gtctgtttgaaatagtttttgttttctgtttttgaaata 8163696  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 40337157 - 40337119
Alignment:
Q  189 gtctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  40337157 gtctgtttgaaatagtttttgttttcagttttcgaaata 40337119  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 227
Target Start/End: Original strand, 41326042 - 41326077
Alignment:
Q  192 tgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||||||||||||| |||||||||||||    
T  41326042 tgtttgaaatagtttttgttttgagtttttgaaata 41326077  T

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Target: scaffold0140 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 21476 - 21512
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||| ||||||||||||||||||||||||||    
T  21476 ctgtttgaaacagtttttgttttcagtttttgaaata 21512  T

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Target: scaffold1248 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Original strand, 970 - 1004
Alignment:
Q  193 gtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  970 gtttgaaatagtttttgttttcagtttttaaaata 1004  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 227
Target Start/End: Complemental strand, 1343 - 1309
Alignment:
Q  193 gtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||||||||||||| |||||    
T  1343 gtttgaaatagtttttgttttcagtttttaaaata 1309  T

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Target: scaffold0302 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 18592 - 18556
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  18592 ctgtttgaaatagtttttggttttagtttttgaaata 18556  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 227
Target Start/End: Original strand, 67872 - 67908
Alignment:
Q  191 ctgtttgaaatagtttttgttttcagtttttgaaata 227  Q
    |||||||||||| |||||||||||||||||| |||||    
T  67872 ctgtttgaaataatttttgttttcagtttttaaaata 67908  T

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