View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4464_high_46 (Length: 222)
Name: NF4464_high_46
Description: NF4464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4464_high_46 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 29906520 - 29906307
Alignment:
| Q |
1 |
tctagagagaatcacatgatgatgcaataaaattcagtctcaaaaaattcataccacaagttgaatagaagccccacgccacatttgttgtagtcccctc |
100 |
Q |
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| T |
29906520 |
tctagagagaatcacatgatgatgcaataaaattcagtctcaaaaaattcataccacaagttgaatagaagccccacgccacatttgttgtagtcccctc |
29906421 |
T |
|
| Q |
101 |
catatgtttaattagtaacgacaaaacatagattgaatggtcaaacaaacatttataatacccgtcaagatattttatagaatttggaagagatgccctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29906420 |
catatgtttaattagtaacgacaaaacatagattgaatggtcaaacaaacatttataatacccgtcaagatattttatagaatttggaagagatgccctt |
29906321 |
T |
|
| Q |
201 |
aatttgatgatgtc |
214 |
Q |
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||||| |||||||| |
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| T |
29906320 |
aatttaatgatgtc |
29906307 |
T |
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