View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4464_low_17 (Length: 335)

Name: NF4464_low_17
Description: NF4464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4464_low_17
NF4464_low_17
[»] chr7 (8 HSPs)
chr7 (23-246)||(42513062-42513285)
chr7 (96-246)||(30456307-30456456)
chr7 (23-170)||(38572287-38572434)
chr7 (96-246)||(30452702-30452847)
chr7 (124-236)||(11206499-11206611)
chr7 (67-247)||(41712265-41712443)
chr7 (71-235)||(49017102-49017266)
chr7 (122-236)||(6102928-6103043)
[»] chr3 (8 HSPs)
chr3 (46-246)||(36326442-36326640)
chr3 (23-185)||(30911982-30912144)
chr3 (25-197)||(55211737-55211905)
chr3 (150-236)||(14029381-14029467)
chr3 (23-177)||(32414663-32414821)
chr3 (110-199)||(33328218-33328306)
chr3 (207-246)||(30912146-30912185)
chr3 (190-232)||(32414847-32414889)
[»] chr6 (7 HSPs)
chr6 (23-248)||(4834644-4834871)
chr6 (23-246)||(7415566-7415789)
chr6 (39-246)||(7422590-7422797)
chr6 (26-246)||(7426516-7426736)
chr6 (23-246)||(33242776-33242998)
chr6 (144-246)||(13886589-13886691)
chr6 (23-93)||(13886515-13886585)
[»] chr5 (6 HSPs)
chr5 (23-247)||(8123455-8123679)
chr5 (23-236)||(671389-671602)
chr5 (119-247)||(41709523-41709651)
chr5 (96-246)||(24108697-24108848)
chr5 (273-319)||(4287571-4287617)
chr5 (166-246)||(10321869-10321949)
[»] chr1 (6 HSPs)
chr1 (23-246)||(18583886-18584109)
chr1 (96-246)||(23405475-23405625)
chr1 (156-246)||(21075941-21076031)
chr1 (23-86)||(13087634-13087696)
chr1 (156-236)||(9893803-9893883)
chr1 (119-236)||(13087701-13087817)
[»] chr8 (2 HSPs)
chr8 (105-246)||(44761976-44762117)
chr8 (105-246)||(44765283-44765424)
[»] chr4 (6 HSPs)
chr4 (96-246)||(27387620-27387770)
chr4 (114-246)||(55322334-55322467)
chr4 (23-136)||(20441029-20441141)
chr4 (105-246)||(36050673-36050813)
chr4 (105-246)||(36053932-36054072)
chr4 (122-236)||(24733642-24733756)
[»] chr2 (5 HSPs)
chr2 (23-138)||(31211616-31211731)
chr2 (142-246)||(31211859-31211963)
chr2 (96-230)||(45327420-45327554)
chr2 (163-236)||(31193244-31193317)
chr2 (209-246)||(40400909-40400946)


Alignment Details
Target: chr7 (Bit Score: 168; Significance: 5e-90; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 42513285 - 42513062
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtc 122  Q
    ||||||||||||| |||||||||||||||||||| | |||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  42513285 atgactcaccttaatctagaaggatctagaaggtctattgttaggggataatattgagtatgttagggtacacttatcttattatgagtatgcacaagtc 42513186  T
Q  123 tatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgat 222  Q
    ||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  42513185 tatataagcattgtatgctttattatgagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctccctctaatttctggagtgtgat 42513086  T
Q  223 ccctactcgaattgaatcgtatca 246  Q
    ||||||||||||||  ||||||||    
T  42513085 ccctactcgaattgggtcgtatca 42513062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 30456307 - 30456456
Alignment:
Q  96 ttatgttattatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagt 195  Q
    |||| |||||||||||||||| ||||||||||||||||| ||||  |||| || |||| ||||||| |||||||||||||||||||||||||||||||||    
T  30456307 ttatcttattatgagtatgca-aagtctatataagcattatatgccttatgattagaacgaatgaaaaatataatgaattttctttctcttttctctagt 30456405  T
Q  196 ttctccctctgaattctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  30456406 ttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 30456456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 38572434 - 38572287
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtc 122  Q
    ||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||| ||| |||| ||||||| ||||||||| ||||| ||||||    
T  38572434 atgactcaccttaatctaaaaggatctagaaggtatcttgttaggggataatattgagtaagttagggtacacttatcttattatgaatatgcccaagtc 38572335  T
Q  123 tatataagcattgtatgttttattatgagaatgaatgaataatataat 170  Q
    ||||||| |||||||||  ||||||||||||| ||| || ||||||||    
T  38572334 tatataaacattgtatgccttattatgagaattaataaaaaatataat 38572287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 30452702 - 30452847
Alignment:
Q  96 ttatgttattatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagt 195  Q
    |||| |||||||||||||||| |||||||||||    |||||||  |||| || |||| ||||||| |||||||||||||||||||||||||||||||||    
T  30452702 ttatcttattatgagtatgca-aagtctatata----ttgtatgccttatgattagaacgaatgaaaaatataatgaattttctttctcttttctctagt 30452796  T
Q  196 ttctccctctgaattctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  30452797 ttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 30452847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 124 - 236
Target Start/End: Original strand, 11206499 - 11206611
Alignment:
Q  124 atataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgatc 223  Q
    |||||| |||||||||  ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11206499 atataaacattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatc 11206598  T
Q  224 cctactcgaattg 236  Q
     ||||||||||||    
T  11206599 tctactcgaattg 11206611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 67 - 247
Target Start/End: Original strand, 41712265 - 41712443
Alignment:
Q  67 gggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataata 166  Q
    ||||| ||||| |||||||| |||||||||||| |||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||  || |    
T  41712265 gggataatattaagtatgttagggtgcacttattttattatgagtaggcacaagtctatataagtattgtatgtcttattatgagaatgaatga--aaaa 41712362  T
Q  167 taatgaattttctttctcttttctctagtttctccctctgaa-ttctggagtgtgatccctactcgaattgaatcgtatcaa 247  Q
    |||  ||||| |||||| || |||||||||| || |||| || || ||||||||||||| |||||||||||  |||||||||    
T  41712363 taacaaatttcctttcttttgtctctagttt-tctctcttaatttttggagtgtgatccttactcgaattgggtcgtatcaa 41712443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 71 - 235
Target Start/End: Original strand, 49017102 - 49017266
Alignment:
Q  71 tgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataat 170  Q
    ||||||||||||||||  | ||||||||| ||||||||| ||| ||||||| | |||||||||||||||  ||||||||||| | |||||| ||||||||    
T  49017102 tgatattgagtatgttatgatgcacttatcttattatgactatccacaagtttgtataagcattgtatgccttattatgagacttaatgaaaaatataat 49017201  T
Q  171 gaattttctttctcttttctctagtttctccctctgaattctggagtgtgatccctactcgaatt 235  Q
      ||||||||||| || ||||||||||||| |||| | || |||||||||||||||| |||||||    
T  49017202 atattttctttcttttatctctagtttctctctctaatttatggagtgtgatccctattcgaatt 49017266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 6102928 - 6103043
Alignment:
Q  122 ctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttcttt-ctcttttctctagtttctccctctgaa-ttctggagtgt 219  Q
    ||||||||||||||||| ||| || || ||||| |||||| ||||||||||||||| ||| || || |||||||||| || |||| || || ||||||||    
T  6102928 ctatataagcattgtatctttcatgattagaatcaatgaaaaatataatgaattttttttgcttttatctctagttt-tctctcttaatttatggagtgt 6103026  T
Q  220 gatccctactcgaattg 236  Q
    ||| |||||||||||||    
T  6103027 gattcctactcgaattg 6103043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 158; Significance: 5e-84; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 46 - 246
Target Start/End: Original strand, 36326442 - 36326640
Alignment:
Q  46 atctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtctatataagcattgtatgttttat 145  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||  ||||||||||||||||||||| |||||    
T  36326442 atctagaaggtatcttgttaggggatgatattgagtatgttagggtgcacttaggttattatgagtatgca--agtctatataagcattgtatgctttat 36326539  T
Q  146 tatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgatccctactcgaattgaatcgtatc 245  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||    
T  36326540 tatgagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatc 36326639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 23 - 185
Target Start/End: Original strand, 30911982 - 30912144
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtc 122  Q
    ||||||||||||| |||||||||||||| ||  |||||||||||||||| |||||||||||||| |||||||||||| ||||| ||||||||||||||||    
T  30911982 atgactcaccttaatctagaaggatctaaaatatatcttgttaggggataatattgagtatgttagggtgcacttattttattgtgagtatgcacaagtc 30912081  T
Q  123 tatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctct 185  Q
    |||||||| ||||||||  ||||||||||||| |||||| |||||||||||||||||||||||    
T  30912082 tatataagtattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctct 30912144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 25 - 197
Target Start/End: Complemental strand, 55211905 - 55211737
Alignment:
Q  25 gactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtcta 124  Q
    |||||| |||| |||| ||||||| | ||||||| ||| |||||||| |||||||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  55211905 gactcatcttaatctaaaaggatccataaggtatattggtaggggataatattgagtatgttagggtgcacttatcttattatgaatatgcacaagtcta 55211806  T
Q  125 tataagcattgtatgttttattatgagaatgaatgaataatataatgaattt-tctttctcttttctctagttt 197  Q
    |||     |||||||  ||||||||||||| |||||| |||||||||||||| | | |||||| ||||||||||    
T  55211805 tat-----ttgtatgccttattatgagaatcaatgaaaaatataatgaatttatttctctcttatctctagttt 55211737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 236
Target Start/End: Original strand, 14029381 - 14029467
Alignment:
Q  150 agaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgatccctactcgaattg 236  Q
    ||||| |||||| |||||||||||||| |||||| || ||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  14029381 agaatcaatgaaaaatataatgaatttcctttcttttatctctagtttctcactctaaattctggagtgtgatccctactcgaattg 14029467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 177
Target Start/End: Original strand, 32414663 - 32414821
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgc----aca 118  Q
    |||||||||||||  ||| ||||||||||||||||| ||||  |||||| ||||| ||||||||  ||||||||||| ||||| ||||| |||    |||    
T  32414663 atgactcaccttaacctataaggatctagaaggtatattgtctggggataatattaagtatgttatggtgcacttatcttattttgagtttgcacaaaca 32414762  T
Q  119 agtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaatttt 177  Q
    ||||||||||| |||||||||  |||||| |||||| ||| || |||||||||| ||||    
T  32414763 agtctatataaacattgtatgccttattacgagaatcaataaaaaatataatgattttt 32414821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 110 - 199
Target Start/End: Original strand, 33328218 - 33328306
Alignment:
Q  110 gtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttct 199  Q
    ||||||| |||||| ||||||||||||||| ||||| || ||||  ||||||  ||||||| ||||| |||||| |||||| ||||||||    
T  33328218 gtatgcataagtctgtataagcattgtatgctttataattagaaccaatgaaagatataatcaatttcctttcttttttct-tagtttct 33328306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 246
Target Start/End: Original strand, 30912146 - 30912185
Alignment:
Q  207 aattctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    |||||||||||||||||| |||||||||||| ||||||||    
T  30912146 aattctggagtgtgatccgtactcgaattgagtcgtatca 30912185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 32414847 - 32414889
Alignment:
Q  190 tctagtttctccctctgaattctggagtgtgatccctactcga 232  Q
    ||||||||||| |||| |||| |||||||||||||||||||||    
T  32414847 tctagtttctctctctaaattttggagtgtgatccctactcga 32414889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 1e-78; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 23 - 248
Target Start/End: Original strand, 4834644 - 4834871
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaagg--tatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaag 120  Q
    ||||||||||||| |||||||||||||| ||||  |||||| ||||||||| |||||||||||||| |||||||||||| |||||||||||||||| |||    
T  4834644 atgactcaccttaatctagaaggatctaaaaggagtatcttattaggggataatattgagtatgttagggtgcacttatcttattatgagtatgcataag 4834743  T
Q  121 tctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtg 220  Q
    |||||||||||||||||||  | ||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4834744 tctatataagcattgtatgcctcattattagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtg 4834843  T
Q  221 atccctactcgaattgaatcgtatcaac 248  Q
    |||||||||| |||||  ||||||||||    
T  4834844 atccctactcaaattgggtcgtatcaac 4834871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 6e-71
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 7415566 - 7415789
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtc 122  Q
    |||||||| |||| | |||||||||||||||  |||||||||||||||| ||||||||||||||  ||||||||||| ||||||||||||  || |||||    
T  7415566 atgactcatcttaatttagaaggatctagaaattatcttgttaggggataatattgagtatgttatggtgcacttatcttattatgagtacacataagtc 7415665  T
Q  123 tatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgat 222  Q
    |||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||| | ||||||||||||||    
T  7415666 tatataagcattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctctctctaatttctggagtgtgat 7415765  T
Q  223 ccctactcgaattgaatcgtatca 246  Q
    |||||||| | ||| |||||||||    
T  7415766 ccctactcaagttggatcgtatca 7415789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 39 - 246
Target Start/End: Original strand, 7422590 - 7422797
Alignment:
Q  39 tagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtctatataagcattgtat 138  Q
    |||||||||||||||| |||||||||||||||| | ||||||||||||  ||||||||||| |||||| |||||  || |||||||||||||||||||||    
T  7422590 tagaaggatctagaagttatcttgttaggggataacattgagtatgttatggtgcacttatcttattaagagtacacataagtctatataagcattgtat 7422689  T
Q  139 gttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgatccctactcgaattgaa 238  Q
    |  ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||| | |||| |||||||||||||||||||||||      
T  7422690 gccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctctctctaatttcttgagtgtgatccctactcgaattggg 7422789  T
Q  239 tcgtatca 246  Q
    ||||||||    
T  7422790 tcgtatca 7422797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 26 - 246
Target Start/End: Original strand, 7426516 - 7426736
Alignment:
Q  26 actcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtctat 125  Q
    ||||| |||| ||||| |||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||| |||||| |||||  || ||||||||    
T  7426516 actcatcttaatctagtaggatctagaagttatcttgttaggggataatattgagtatgttatggtgcacttatcttattaagagtacacataagtctat 7426615  T
Q  126 ataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgatccc 225  Q
    |||| |||||||||  ||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||  ||| | |||||||||||||||||    
T  7426616 ataaacattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctctaatttctctttctaatttctggagtgtgatccc 7426715  T
Q  226 tactcgaattgaatcgtatca 246  Q
    |||||||||||  ||||||||    
T  7426716 tactcgaattgggtcgtatca 7426736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 23 - 246
Target Start/End: Original strand, 33242776 - 33242998
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtc 122  Q
    |||| ||| ||||||||| |||||| ||||||  || |||||||||||| |||||||||||||| || ||||||||| ||||||||||||||||||||||    
T  33242776 atgagtcatcttagtctataaggatttagaagacatattgttaggggataatattgagtatgttagg-tgcacttatcttattatgagtatgcacaagtc 33242874  T
Q  123 tatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgat 222  Q
    |||||||||||||||||  ||||||||||||| |||||| ||||||||||||||  ||||| || | ||||||||||| |||| | ||||||||||||||    
T  33242875 tatataagcattgtatgccttattatgagaatcaatgaaaaatataatgaatttcttttcttttatttctagtttctctctctaatttctggagtgtgat 33242974  T
Q  223 ccctactcgaattgaatcgtatca 246  Q
    | ||||||||||||  ||||||||    
T  33242975 ctctactcgaattgggtcgtatca 33242998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 144 - 246
Target Start/End: Original strand, 13886589 - 13886691
Alignment:
Q  144 attatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgatccctactcgaattgaatcgta 243  Q
    ||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  |||||    
T  13886589 attattagaatcaatgaaaaatataatgaattttctttctcttttctctagtttctccctctaaattctggagtgtgatccctactcaaattgggtcgta 13886688  T
Q  244 tca 246  Q
    |||    
T  13886689 tca 13886691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 93
Target Start/End: Original strand, 13886515 - 13886585
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgc 93  Q
    ||||||||||||| ||||||| |||||| ||||||| |||||| ||| | ||||| |||||||| ||||||    
T  13886515 atgactcaccttaatctagaaagatctaaaaggtatattgttaaggggtaatattaagtatgttagggtgc 13886585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 145; Significance: 3e-76; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 23 - 247
Target Start/End: Original strand, 8123455 - 8123679
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtc 122  Q
    |||||| |||||| |||||||||||||||||| | | |||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||    
T  8123455 atgactgaccttaatctagaaggatctagaagatctattgttaggggataatattgagtatgttagggtacacttatcttattatgagtatgcacaagtc 8123554  T
Q  123 tatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgat 222  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||| || ||||||||||| | ||||| ||||||||    
T  8123555 tatataagcattgtatgctttattatgagaatcaatgaaaaatataatgaattttctttctcttttctttaatttctccctctaatttctgaagtgtgat 8123654  T
Q  223 ccctactcgaattgaatcgtatcaa 247  Q
    || |||||||||||  |||||||||    
T  8123655 ccatactcgaattgggtcgtatcaa 8123679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 23 - 236
Target Start/End: Original strand, 671389 - 671602
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtc 122  Q
    ||||||||||||| |||||||||||| | ||| ||| |||||||||||| |||||||||| ||| |||| ||||||| |||||||||||||||||||||     
T  671389 atgactcaccttaatctagaaggatccataagatatattgttaggggataatattgagtaggttagggtacacttatcttattatgagtatgcacaagtt 671488  T
Q  123 tatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctag-tttctccctctgaattctggagtgtga 221  Q
    ||||||| |||||||||  ||||||||||||| |||||| ||||||||||||||||||||| || ||||||| |||||| || | | ||||| |||||||    
T  671489 tatataatcattgtatgccttattatgagaattaatgaaaaatataatgaattttctttcttttatctctagctttctctct-taatttctgaagtgtga 671587  T
Q  222 tccctactcgaattg 236  Q
    |||| ||||||||||    
T  671588 tcccaactcgaattg 671602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 119 - 247
Target Start/End: Original strand, 41709523 - 41709651
Alignment:
Q  119 agtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtg 218  Q
    ||||||||||| |||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  41709523 agtctatataaacattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctatagtttctccctctaaattctggagtg 41709622  T
Q  219 tgatccctactcgaattgaatcgtatcaa 247  Q
    ||||| ||||||||||||  |||||||||    
T  41709623 tgatctctactcgaattgggtcgtatcaa 41709651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 24108697 - 24108848
Alignment:
Q  96 ttatgttattatgagtatgca-caagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctag 194  Q
    |||| |||||||||||||||| |||||||||||||||||||||||| |||| || ||||  |||||| |||||||||||||| ||||   || |||||||    
T  24108697 ttattttattatgagtatgcaacaagtctatataagcattgtatgtcttatgattagaaccaatgaaaaatataatgaatttccttttgtttgtctctag 24108796  T
Q  195 -tttctccctctgaattctggagtgtgatccctactcgaattgaatcgtatca 246  Q
     ||||| ||| | | ||||||||||||||||||||||||||||  ||||||||    
T  24108797 ttttcttcct-taatttctggagtgtgatccctactcgaattgggtcgtatca 24108848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 4287571 - 4287617
Alignment:
Q  273 cttgctccctaaaactatattcttctgttttgtcatctctctgtgct 319  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  4287571 cttgctccctaaaactaaattcttctgttttgtcatctctctgtgct 4287617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 246
Target Start/End: Complemental strand, 10321949 - 10321869
Alignment:
Q  166 ataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    ||||||||||| ||||||||| ||||||| || || |||| |||| ||||||||||||||||||| |||||  ||||||||    
T  10321949 ataatgaatttcctttctcttatctctagcttatctctctaaattatggagtgtgatccctactcaaattgggtcgtatca 10321869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 1e-59; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 23 - 246
Target Start/End: Complemental strand, 18584109 - 18583886
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtc 122  Q
    ||||||||||||| |||||||||||||| ||||||| || ||||||||| |||||||||||||| ||||||| ||||  |||||| ||||||||||||||    
T  18584109 atgactcaccttaatctagaaggatctaaaaggtatattattaggggataatattgagtatgttagggtgcagttatcgtattataagtatgcacaagtc 18584010  T
Q  123 tatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaa-ttctggagtgtga 221  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||| ||||||| |||||| || |||||||||| || |||| || ||||||||||| |    
T  18584009 tatataagcattgtatgctttattatgagaatcaatgaaaaatatactgaatttcctttcttttatctctagttt-tctctcttaatttctggagtgtaa 18583911  T
Q  222 tccctactcgaattgaatcgtatca 246  Q
    || ||||||||||||  ||||||||    
T  18583910 tctctactcgaattgggtcgtatca 18583886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 96 - 246
Target Start/End: Complemental strand, 23405625 - 23405475
Alignment:
Q  96 ttatgttattatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagt 195  Q
    |||| ||| |||| |||||||||||||||| ||| |||||||||  ||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  23405625 ttatcttactatgtgtatgcacaagtctatctaaacattgtatgccttattatgagaatcaatgaaaaatataatgaattttctttctcttttctctagt 23405526  T
Q  196 ttctccctctgaattctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    |||||||||| ||||||||||||||||||||||| ||||||  ||||||||    
T  23405525 ttctccctctaaattctggagtgtgatccctacttgaattgggtcgtatca 23405475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 21076031 - 21075941
Alignment:
Q  156 aatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    |||||| |||||| ||||||| |||||| || ||| ||||||||| | || ||||||||||||| |||||||||||||||  |||||||||    
T  21076031 aatgaaaaatatagtgaatttcctttcttttatctgtagtttctctcgctaaattctggagtgtcatccctactcgaatttgatcgtatca 21075941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 86
Target Start/End: Original strand, 13087634 - 13087696
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgtt 86  Q
    ||||||||||||| |||||| | ||||||||||||| |||||||||||| |||| |||||||||    
T  13087634 atgactcaccttaatctagacg-atctagaaggtatattgttaggggataatatcgagtatgtt 13087696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 9893803 - 9893883
Alignment:
Q  156 aatgaataatataatgaattttctttctcttttctctagtttctccctctgaattctggagtgtgatccctactcgaattg 236  Q
    |||||| ||||||||||||||||||||| |  ||||||||||||  | || |||| || |||||||| ||||||| |||||    
T  9893803 aatgaaaaatataatgaattttctttctttcatctctagtttctttcactaaattatgcagtgtgatacctactcaaattg 9893883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 236
Target Start/End: Original strand, 13087701 - 13087817
Alignment:
Q  119 agtctatataagcattgtatgttttattatgagaatgaatg-aataatataatgaattttctttctcttttctctagtttctccctctgaattctggagt 217  Q
    |||||||||||| ||||||||  |||||||||||||||||| || |||| |||||||||  ||||| || ||| ||    ||| |||  |||||||||||    
T  13087701 agtctatataagtattgtatgccttattatgagaatgaatgaaaaaatacaatgaatttattttcttttatcttta--acctctctcgaaattctggagt 13087798  T
Q  218 gtgatccctactcgaattg 236  Q
    ||||| |||| ||||||||    
T  13087799 gtgatacctattcgaattg 13087817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 7e-46; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 44761976 - 44762117
Alignment:
Q  105 tatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctc 204  Q
    |||| |||||||||||||||||||| |||||||||  ||||||||| ||| |||||| ||||||||||||||| |||||||||||| |||||||||||||    
T  44761976 tatgtgtatgcacaagtctatataaacattgtatgccttattatgaaaatcaatgaaaaatataatgaattttttttctcttttctatagtttctccctc 44762075  T
Q  205 tgaattctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    | ||||||||||||||||||||||||||||||  ||||||||    
T  44762076 taaattctggagtgtgatccctactcgaattgggtcgtatca 44762117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 44765283 - 44765424
Alignment:
Q  105 tatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctc 204  Q
    |||| |||||||||||||||||||| ||||||||   ||||||||| ||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  44765283 tatgtgtatgcacaagtctatataaacattgtattccttattatgaaaatcaatgaaaaatataatgaattttctttctcttttctatagtttctccctc 44765382  T
Q  205 tgaattctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    | ||||||||||||| ||||||||||||||||  ||||||||    
T  44765383 taaattctggagtgtaatccctactcgaattgggtcgtatca 44765424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 96 - 246
Target Start/End: Original strand, 27387620 - 27387770
Alignment:
Q  96 ttatgttattatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagt 195  Q
    |||| |||||| ||| ||||||||||||||||||||||||||||  | ||||| || | ||||||| ||||||||||||||  ||||  |  ||||||||    
T  27387620 ttatcttattacgaggatgcacaagtctatataagcattgtatgcctcattattagcaggaatgaaaaatataatgaatttcttttccttcatctctagt 27387719  T
Q  196 ttctccctctgaattctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    |||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  27387720 ttctccctctaaattctggagtgtgatccctactcgaattgggtcgtatca 27387770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 114 - 246
Target Start/End: Complemental strand, 55322467 - 55322334
Alignment:
Q  114 gcacaagtctatataagcattgtatgttttattatgagaatgaatgaataata-taatgaattttctttctcttttctctagtttctccctctgaattct 212  Q
    ||||||||||||||||||||||||||  | ||||| || ||||||||| |||| |||||||||| |||||| || ||||||| |||| | ||| ||||||    
T  55322467 gcacaagtctatataagcattgtatgcctcattattaggatgaatgaaaaataataatgaatttcctttcttttatctctagcttctacttctaaattct 55322368  T
Q  213 ggagtgtgatccctactcgaattgaatcgtatca 246  Q
    ||||||||||||||||||||||||  ||||||||    
T  55322367 ggagtgtgatccctactcgaattgggtcgtatca 55322334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 20441141 - 20441029
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtc 122  Q
    ||||||||||||| | |||||| ||||| || |||| |||||| ||||| |||||||| ||||  |||||||||||| ||||||||||||||||||||||    
T  20441141 atgactcaccttaatttagaag-atctaaaaagtatattgttaagggataatattgagcatgtcagggtgcacttatcttattatgagtatgcacaagtc 20441043  T
Q  123 tatataagcattgt 136  Q
    | || |||||||||    
T  20441042 tgtacaagcattgt 20441029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 36050673 - 36050813
Alignment:
Q  105 tatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctc 204  Q
    |||| |||||||||||||||||||| |||||||||  ||||||||||    |||||| ||||||||||||||  ||||| || |||||||||| || ||     
T  36050673 tatgtgtatgcacaagtctatataaacattgtatgccttattatgag-ggaaatgaaaaatataatgaatttcttttcttttatctctagttt-tctctt 36050770  T
Q  205 tgaa-ttctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    | || || |||||||||||||||||||||||||  ||||||||    
T  36050771 ttaatttttggagtgtgatccctactcgaattgggtcgtatca 36050813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 246
Target Start/End: Original strand, 36053932 - 36054072
Alignment:
Q  105 tatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctc 204  Q
    |||| |||||||||||||||||||| |||||||||  ||||||||||    |||||| ||||||||||||||  ||||| || |||||||||| || ||     
T  36053932 tatgtgtatgcacaagtctatataaacattgtatgccttattatgag-ggaaatgaaaaatataatgaatttcttttcttttatctctagttt-tctctt 36054029  T
Q  205 tgaa-ttctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    | || || |||||||||||||||||||||||||  ||||||||    
T  36054030 ttaatttttggagtgtgatccctactcgaattgggtcgtatca 36054072  T

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Target: chr4; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 236
Target Start/End: Original strand, 24733642 - 24733756
Alignment:
Q  122 ctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaat-tctggagtgtg 220  Q
    ||||||||||||||||||||| || || |||| ||||||| |||||||||||||| |||||| || | |||||||| || |||| ||| |||  ||||||    
T  24733642 ctatataagcattgtatgtttcatgattagaaggaatgaaaaatataatgaatttcctttcttttatatctagttt-tctctcttaatatctaaagtgtg 24733740  T
Q  221 atccctactcgaattg 236  Q
    ||||||||| ||||||    
T  24733741 atccctacttgaattg 24733756  T

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Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 138
Target Start/End: Original strand, 31211616 - 31211731
Alignment:
Q  23 atgactcaccttagtctagaaggatctagaaggtatcttgttaggggatgatattgagtatgttggggtgcacttatgttattatgagtatgcacaagtc 122  Q
    ||||||||| ||| ||||||||||| |||||| ||| |||||||||||| |||||||||||||| | |||||||||| ||| |||||||||||| |||||    
T  31211616 atgactcactttaatctagaaggatttagaagatatattgttaggggataatattgagtatgttagagtgcacttatcttaatatgagtatgcataagtc 31211715  T
Q  123 tatataagcattgtat 138  Q
    |||||||| |||||||    
T  31211716 tatataagtattgtat 31211731  T

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Target: chr2; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 142 - 246
Target Start/End: Original strand, 31211859 - 31211963
Alignment:
Q  142 ttattatgagaatgaatgaataatataatgaattttctttctcttttctctagtttctccctctgaa-ttctggagtgtgatccctactcgaattgaatc 240  Q
    ||||||||||||| |||||| ||||||||||||||||||||| || |||||||||| || |||| || |||||||||||||||||||||||||||| |||    
T  31211859 ttattatgagaatcaatgaaaaatataatgaattttctttcttttatctctagttt-tctctcttaatttctggagtgtgatccctactcgaattggatc 31211957  T
Q  241 gtatca 246  Q
    ||||||    
T  31211958 gtatca 31211963  T

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Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 96 - 230
Target Start/End: Complemental strand, 45327554 - 45327420
Alignment:
Q  96 ttatgttattatgagtatgcacaagtctatataagcattgtatgttttattatgagaatgaatgaataatataatgaattttctttctcttttctctagt 195  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||||| |||||  ||||| || |||||| |    
T  45327554 ttatcttactatgtgtatgcacaagtctatataagcattgtatgtcttattatgagaaaaaatgaaaaatataataaatttcttttcttttatctctaat 45327455  T
Q  196 ttctccctctgaa-ttctggagtgtgatccctactc 230  Q
    || || |||| || ||||||||||||||||||||||    
T  45327454 tt-tctctcttaatttctggagtgtgatccctactc 45327420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 31193244 - 31193317
Alignment:
Q  163 aatataatgaattttctttctcttttctctagtttctccctctgaatt-ctggagtgtgatccctactcgaattg 236  Q
    |||||||| |||||||||||| |  |||||||||| || |||| |||| || |||||||||||||||||||||||    
T  31193244 aatataataaattttctttctttcatctctagttt-tctctcttaatttctagagtgtgatccctactcgaattg 31193317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 246
Target Start/End: Complemental strand, 40400946 - 40400909
Alignment:
Q  209 ttctggagtgtgatccctactcgaattgaatcgtatca 246  Q
    ||||||||||||||||||||||||||||| || |||||    
T  40400946 ttctggagtgtgatccctactcgaattgagtcatatca 40400909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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