View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4464_low_2 (Length: 640)

Name: NF4464_low_2
Description: NF4464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4464_low_2
NF4464_low_2
[»] chr8 (65 HSPs)
chr8 (23-174)||(16524293-16524444)
chr8 (225-309)||(25267019-25267103)
chr8 (505-588)||(9608738-9608821)
chr8 (504-627)||(34834868-34834992)
chr8 (505-573)||(41972151-41972219)
chr8 (510-588)||(45121992-45122070)
chr8 (504-607)||(6876924-6877029)
chr8 (504-588)||(3038372-3038456)
chr8 (512-627)||(3669687-3669803)
chr8 (504-588)||(8918846-8918930)
chr8 (504-577)||(9309347-9309420)
chr8 (507-588)||(40518577-40518658)
chr8 (229-305)||(2233861-2233937)
chr8 (505-573)||(4154763-4154831)
chr8 (504-588)||(5420643-5420727)
chr8 (507-577)||(1514008-1514078)
chr8 (507-577)||(45122150-45122220)
chr8 (504-588)||(147443-147527)
chr8 (504-588)||(25561898-25561982)
chr8 (504-588)||(30359601-30359685)
chr8 (234-314)||(32162806-32162886)
chr8 (502-573)||(4154377-4154448)
chr8 (520-577)||(41416264-41416321)
chr8 (508-588)||(45123002-45123080)
chr8 (512-588)||(3670060-3670136)
chr8 (504-588)||(8794103-8794187)
chr8 (504-588)||(30359263-30359347)
chr8 (504-588)||(33113449-33113533)
chr8 (520-588)||(34835217-34835285)
chr8 (504-563)||(147821-147880)
chr8 (505-588)||(9620758-9620841)
chr8 (510-577)||(18372349-18372416)
chr8 (510-577)||(18372792-18372859)
chr8 (522-577)||(25561737-25561792)
chr8 (504-588)||(9482686-9482768)
chr8 (504-589)||(37544571-37544656)
chr8 (520-588)||(70356-70424)
chr8 (524-588)||(18373013-18373077)
chr8 (505-569)||(20995502-20995566)
chr8 (505-577)||(33831971-33832043)
chr8 (501-571)||(5274764-5274834)
chr8 (505-588)||(9308970-9309055)
chr8 (504-575)||(40518061-40518134)
chr8 (512-577)||(1013964-1014029)
chr8 (512-577)||(1014338-1014403)
chr8 (512-561)||(6731904-6731953)
chr8 (535-588)||(9609108-9609161)
chr8 (549-598)||(40579578-40579627)
chr8 (520-577)||(43398164-43398221)
chr8 (504-577)||(45121749-45121821)
chr8 (504-572)||(5915864-5915931)
chr8 (520-576)||(18380111-18380167)
chr8 (505-545)||(18645712-18645752)
chr8 (512-564)||(30441081-30441133)
chr8 (525-588)||(3037790-3037853)
chr8 (229-344)||(5493938-5494053)
chr8 (249-341)||(11190536-11190630)
chr8 (299-342)||(36068023-36068066)
chr8 (223-326)||(39907971-39908074)
chr8 (503-573)||(9620385-9620455)
chr8 (506-588)||(12283867-12283949)
chr8 (514-588)||(18372685-18372758)
chr8 (526-588)||(45122638-45122700)
chr8 (504-624)||(43274824-43274945)
chr8 (522-598)||(18372066-18372142)
[»] chr6 (48 HSPs)
chr6 (225-343)||(12185662-12185780)
chr6 (225-342)||(9456165-9456282)
chr6 (505-627)||(10074405-10074528)
chr6 (504-588)||(2579954-2580038)
chr6 (505-588)||(10074073-10074156)
chr6 (511-588)||(593791-593868)
chr6 (503-580)||(6071123-6071200)
chr6 (512-588)||(2378126-2378202)
chr6 (504-588)||(2578525-2578608)
chr6 (512-627)||(3409259-3409375)
chr6 (504-588)||(16107670-16107754)
chr6 (512-588)||(26544049-26544125)
chr6 (512-588)||(29518503-29518579)
chr6 (512-588)||(29518920-29518996)
chr6 (512-588)||(32741179-32741255)
chr6 (503-588)||(8481918-8482002)
chr6 (505-577)||(10073709-10073779)
chr6 (504-588)||(2377746-2377830)
chr6 (520-588)||(9062431-9062499)
chr6 (505-588)||(10911558-10911642)
chr6 (512-588)||(14748420-14748496)
chr6 (520-588)||(32460662-32460730)
chr6 (512-588)||(35210204-35210280)
chr6 (225-335)||(10068216-10068326)
chr6 (225-314)||(3441202-3441291)
chr6 (502-571)||(33605644-33605713)
chr6 (520-588)||(1127368-1127436)
chr6 (512-627)||(1846748-1846864)
chr6 (504-588)||(5832108-5832192)
chr6 (504-588)||(16108055-16108139)
chr6 (505-627)||(12092524-12092647)
chr6 (515-577)||(1950278-1950340)
chr6 (512-574)||(3058226-3058288)
chr6 (508-585)||(33605971-33606048)
chr6 (504-572)||(2579203-2579271)
chr6 (504-588)||(16454567-16454651)
chr6 (504-588)||(16454899-16454983)
chr6 (520-588)||(17135151-17135219)
chr6 (237-313)||(25070371-25070447)
chr6 (527-589)||(2975567-2975629)
chr6 (515-577)||(6999889-6999951)
chr6 (250-308)||(10483406-10483464)
chr6 (520-627)||(2579534-2579642)
chr6 (512-588)||(3409660-3409736)
chr6 (520-588)||(3415466-3415534)
chr6 (504-588)||(5958685-5958769)
chr6 (504-539)||(7588355-7588390)
chr6 (505-577)||(2578928-2578999)
[»] scaffold0192 (1 HSPs)
scaffold0192 (225-343)||(13425-13543)
[»] chr5 (57 HSPs)
chr5 (225-342)||(35075881-35075998)
chr5 (505-588)||(1028599-1028682)
chr5 (504-588)||(299481-299565)
chr5 (505-581)||(36568656-36568732)
chr5 (505-588)||(13415842-13415925)
chr5 (505-588)||(41632775-41632858)
chr5 (504-577)||(12662745-12662818)
chr5 (503-588)||(31509614-31509699)
chr5 (504-589)||(15370091-15370176)
chr5 (504-577)||(36492310-36492383)
chr5 (504-588)||(6224188-6224272)
chr5 (508-588)||(40296397-40296477)
chr5 (507-577)||(35150002-35150072)
chr5 (504-577)||(35914841-35914914)
chr5 (512-627)||(623818-623934)
chr5 (512-588)||(624196-624272)
chr5 (508-588)||(3295097-3295176)
chr5 (505-577)||(26074239-26074311)
chr5 (504-588)||(26074864-26074948)
chr5 (504-588)||(26075244-26075328)
chr5 (504-588)||(34753107-34753191)
chr5 (504-596)||(35167912-35168004)
chr5 (504-588)||(42405678-42405762)
chr5 (504-588)||(42508604-42508688)
chr5 (504-577)||(11417070-11417141)
chr5 (514-588)||(18603202-18603276)
chr5 (514-588)||(26074320-26074394)
chr5 (507-588)||(26074607-26074688)
chr5 (504-588)||(3295426-3295509)
chr5 (512-627)||(6500823-6500938)
chr5 (520-588)||(9498736-9498804)
chr5 (505-577)||(24489297-24489369)
chr5 (504-588)||(25327927-25328011)
chr5 (512-588)||(27502118-27502194)
chr5 (512-588)||(32487394-32487469)
chr5 (505-577)||(39309677-39309749)
chr5 (520-588)||(41170642-41170710)
chr5 (520-574)||(38427556-38427610)
chr5 (515-596)||(2411010-2411091)
chr5 (512-577)||(6500451-6500515)
chr5 (512-607)||(5723853-5723949)
chr5 (237-321)||(7802030-7802113)
chr5 (524-627)||(33747783-33747887)
chr5 (505-565)||(36522001-36522061)
chr5 (507-577)||(300954-301024)
chr5 (526-588)||(31509745-31509807)
chr5 (283-343)||(31558172-31558232)
chr5 (504-540)||(35150739-35150775)
chr5 (504-540)||(35151030-35151066)
chr5 (503-551)||(36527202-36527250)
chr5 (225-280)||(31559102-31559157)
chr5 (514-589)||(42524719-42524793)
chr5 (534-627)||(13786043-13786136)
chr5 (512-590)||(26590990-26591068)
chr5 (514-575)||(7768852-7768913)
chr5 (225-280)||(6334845-6334901)
chr5 (512-588)||(29549337-29549413)
[»] chr3 (76 HSPs)
chr3 (225-313)||(16037601-16037689)
chr3 (225-313)||(16041157-16041245)
chr3 (225-313)||(16053097-16053185)
chr3 (225-316)||(17517862-17517953)
chr3 (225-314)||(11076923-11077012)
chr3 (505-588)||(21832425-21832508)
chr3 (225-314)||(41242163-41242252)
chr3 (503-588)||(54017898-54017983)
chr3 (508-588)||(7767396-7767476)
chr3 (505-589)||(9240142-9240226)
chr3 (504-588)||(12114644-12114728)
chr3 (225-314)||(39933371-39933459)
chr3 (504-627)||(15772846-15772970)
chr3 (504-627)||(37990681-37990805)
chr3 (505-588)||(35946515-35946598)
chr3 (504-588)||(32462982-32463067)
chr3 (504-589)||(42342469-42342554)
chr3 (512-589)||(50612533-50612610)
chr3 (504-588)||(29644984-29645068)
chr3 (505-577)||(33175757-33175829)
chr3 (504-627)||(43346833-43346957)
chr3 (504-588)||(49336769-49336853)
chr3 (504-587)||(15773184-15773267)
chr3 (505-588)||(33803334-33803417)
chr3 (504-598)||(25739497-25739591)
chr3 (507-577)||(29644674-29644744)
chr3 (504-586)||(31190009-31190091)
chr3 (508-588)||(1634396-1634477)
chr3 (504-589)||(25755386-25755471)
chr3 (504-588)||(45901705-45901790)
chr3 (504-577)||(52634668-52634741)
chr3 (507-598)||(39336301-39336392)
chr3 (246-311)||(28389449-28389514)
chr3 (225-314)||(31229707-31229796)
chr3 (504-627)||(32462600-32462725)
chr3 (504-577)||(37991070-37991143)
chr3 (505-577)||(8327897-8327969)
chr3 (503-551)||(12747871-12747919)
chr3 (512-588)||(22304569-22304645)
chr3 (504-588)||(39914244-39914328)
chr3 (504-564)||(43346642-43346702)
chr3 (504-588)||(54018280-54018364)
chr3 (522-577)||(42584915-42584970)
chr3 (502-577)||(45395746-45395821)
chr3 (504-563)||(53577356-53577415)
chr3 (225-343)||(5050549-5050666)
chr3 (225-295)||(9821003-9821073)
chr3 (225-341)||(50129095-50129212)
chr3 (504-573)||(53118071-53118140)
chr3 (504-575)||(3135168-3135237)
chr3 (512-564)||(22304246-22304298)
chr3 (504-588)||(32589696-32589779)
chr3 (512-588)||(39389070-39389146)
chr3 (521-577)||(39935048-39935104)
chr3 (239-290)||(6276749-6276800)
chr3 (502-577)||(33809101-33809176)
chr3 (504-588)||(41359847-41359927)
chr3 (505-588)||(47964600-47964683)
chr3 (514-588)||(47508174-47508248)
chr3 (508-577)||(11661531-11661600)
chr3 (520-573)||(36986045-36986098)
chr3 (520-573)||(37011484-37011537)
chr3 (512-577)||(37726504-37726569)
chr3 (284-336)||(4127358-4127410)
chr3 (504-588)||(42342172-42342256)
chr3 (505-573)||(46546422-46546490)
chr3 (512-588)||(51886561-51886637)
chr3 (509-588)||(3384348-3384427)
chr3 (505-587)||(47964998-47965080)
chr3 (504-569)||(3135562-3135627)
chr3 (504-557)||(22304061-22304114)
chr3 (503-551)||(2299967-2300015)
chr3 (512-588)||(4823655-4823731)
chr3 (504-588)||(11661943-11662027)
chr3 (229-273)||(37820812-37820856)
chr3 (225-337)||(50164027-50164139)
[»] chr4 (77 HSPs)
chr4 (225-335)||(5050460-5050570)
chr4 (225-304)||(3067600-3067679)
chr4 (505-577)||(2740693-2740765)
chr4 (505-588)||(3244531-3244614)
chr4 (505-627)||(36629230-36629353)
chr4 (505-580)||(52884688-52884763)
chr4 (225-341)||(45891830-45891947)
chr4 (504-577)||(52884879-52884952)
chr4 (505-586)||(54741260-54741341)
chr4 (504-627)||(22028001-22028125)
chr4 (504-627)||(34646689-34646813)
chr4 (504-627)||(50002418-50002542)
chr4 (504-587)||(3341120-3341203)
chr4 (504-577)||(16888907-16888981)
chr4 (506-588)||(44620654-44620736)
chr4 (504-577)||(10245912-10245985)
chr4 (505-598)||(28034222-28034315)
chr4 (504-588)||(4955397-4955481)
chr4 (504-627)||(36572011-36572135)
chr4 (505-587)||(2741064-2741146)
chr4 (503-585)||(3700356-3700438)
chr4 (504-588)||(16889616-16889701)
chr4 (504-577)||(25483328-25483401)
chr4 (507-588)||(39404013-39404094)
chr4 (504-577)||(44620288-44620361)
chr4 (504-577)||(49076539-49076612)
chr4 (504-588)||(22183344-22183428)
chr4 (504-627)||(36608701-36608825)
chr4 (504-588)||(39404390-39404474)
chr4 (505-577)||(39792951-39793023)
chr4 (503-575)||(41707557-41707629)
chr4 (225-280)||(43967987-43968042)
chr4 (504-577)||(4390192-4390265)
chr4 (504-588)||(1731727-1731811)
chr4 (512-588)||(49880160-49880236)
chr4 (520-588)||(50630835-50630903)
chr4 (505-588)||(54108908-54108989)
chr4 (512-588)||(55933204-55933280)
chr4 (505-588)||(32941203-32941286)
chr4 (506-577)||(44621420-44621491)
chr4 (509-588)||(54017675-54017754)
chr4 (522-577)||(54343092-54343147)
chr4 (507-588)||(3340802-3340883)
chr4 (520-577)||(20826225-20826282)
chr4 (504-588)||(43174498-43174583)
chr4 (504-577)||(45489422-45489495)
chr4 (515-588)||(50459724-50459797)
chr4 (504-586)||(54017784-54017868)
chr4 (504-572)||(12197370-12197438)
chr4 (504-564)||(19504697-19504757)
chr4 (505-577)||(20825829-20825901)
chr4 (512-588)||(41370357-41370433)
chr4 (504-588)||(51768140-51768224)
chr4 (507-606)||(34004646-34004744)
chr4 (243-314)||(47365914-47365985)
chr4 (225-311)||(18371175-18371261)
chr4 (237-290)||(4059118-4059171)
chr4 (520-589)||(6975535-6975604)
chr4 (527-627)||(45496820-45496921)
chr4 (512-565)||(50788086-50788139)
chr4 (237-314)||(52803228-52803305)
chr4 (520-588)||(760197-760265)
chr4 (521-577)||(44620362-44620418)
chr4 (521-577)||(44621011-44621067)
chr4 (505-588)||(10246340-10246423)
chr4 (504-588)||(22028449-22028535)
chr4 (225-343)||(37861227-37861345)
chr4 (237-331)||(14295071-14295165)
chr4 (237-331)||(14311120-14311214)
chr4 (237-331)||(14313321-14313415)
chr4 (504-577)||(44620936-44621010)
chr4 (504-573)||(11348423-11348492)
chr4 (504-553)||(11706636-11706685)
chr4 (503-560)||(45050592-45050649)
chr4 (510-563)||(49302902-49302955)
chr4 (39-75)||(2474257-2474293)
chr4 (506-570)||(49076928-49076992)
[»] chr1 (63 HSPs)
chr1 (504-627)||(39066242-39066366)
chr1 (505-588)||(22077577-22077660)
chr1 (505-627)||(24600356-24600479)
chr1 (504-588)||(17294569-17294653)
chr1 (504-588)||(41184507-41184591)
chr1 (225-335)||(19339949-19340057)
chr1 (504-577)||(66565-66638)
chr1 (225-314)||(31501038-31501127)
chr1 (504-577)||(34364499-34364572)
chr1 (503-588)||(41157366-41157451)
chr1 (232-309)||(46298582-46298659)
chr1 (512-588)||(3537229-3537305)
chr1 (504-588)||(3875413-3875497)
chr1 (504-588)||(5320047-5320131)
chr1 (504-627)||(26661564-26661688)
chr1 (504-588)||(29798191-29798275)
chr1 (504-588)||(34364917-34365001)
chr1 (504-596)||(40082399-40082490)
chr1 (504-588)||(41142364-41142448)
chr1 (504-627)||(41156983-41157107)
chr1 (512-588)||(44290907-44290983)
chr1 (513-588)||(3550721-3550796)
chr1 (502-573)||(22793268-22793339)
chr1 (508-587)||(45084378-45084457)
chr1 (225-311)||(25808471-25808557)
chr1 (512-625)||(44290502-44290616)
chr1 (505-598)||(1188660-1188753)
chr1 (504-577)||(31767254-31767327)
chr1 (504-577)||(37850693-37850766)
chr1 (505-577)||(44685449-44685522)
chr1 (504-627)||(45839619-45839747)
chr1 (520-627)||(14318875-14318983)
chr1 (504-588)||(21378123-21378207)
chr1 (512-627)||(32594758-32594874)
chr1 (512-627)||(41759483-41759599)
chr1 (505-576)||(24132079-24132150)
chr1 (504-577)||(37556103-37556177)
chr1 (505-571)||(50469180-50469246)
chr1 (505-588)||(66169-66254)
chr1 (504-573)||(34649430-34649499)
chr1 (515-588)||(50052105-50052178)
chr1 (508-588)||(11977276-11977356)
chr1 (512-596)||(48588562-48588646)
chr1 (503-577)||(5575097-5575169)
chr1 (505-588)||(19283537-19283620)
chr1 (504-577)||(9955899-9955973)
chr1 (503-577)||(38804448-38804522)
chr1 (505-546)||(22077246-22077287)
chr1 (507-588)||(22077910-22077991)
chr1 (504-588)||(26661980-26662064)
chr1 (505-577)||(30630731-30630803)
chr1 (522-577)||(3537692-3537747)
chr1 (504-559)||(35154150-35154205)
chr1 (522-588)||(5528836-5528902)
chr1 (512-566)||(47379889-47379943)
chr1 (504-577)||(37555722-37555795)
chr1 (505-573)||(4878796-4878864)
chr1 (225-316)||(23392696-23392788)
chr1 (537-588)||(22077192-22077243)
chr1 (507-588)||(1187446-1187527)
chr1 (512-564)||(45494084-45494137)
chr1 (305-337)||(34711038-34711070)
chr1 (512-544)||(50051777-50051809)
[»] chr7 (53 HSPs)
chr7 (504-588)||(1085698-1085782)
chr7 (225-340)||(24211285-24211399)
chr7 (504-588)||(7517572-7517656)
chr7 (504-595)||(43241487-43241578)
chr7 (504-577)||(7554017-7554090)
chr7 (229-298)||(33902215-33902284)
chr7 (504-627)||(23419-23543)
chr7 (504-576)||(24177427-24177499)
chr7 (504-588)||(30244262-30244346)
chr7 (504-627)||(30245069-30245193)
chr7 (504-588)||(45434628-45434712)
chr7 (505-588)||(8128523-8128606)
chr7 (505-588)||(28301625-28301708)
chr7 (504-577)||(118394-118467)
chr7 (504-577)||(30245486-30245559)
chr7 (504-577)||(30255331-30255404)
chr7 (520-627)||(11845199-11845307)
chr7 (504-588)||(16569188-16569272)
chr7 (504-588)||(16596390-16596474)
chr7 (504-588)||(22566744-22566828)
chr7 (512-627)||(29157565-29157681)
chr7 (504-588)||(45754708-45754791)
chr7 (504-577)||(30244693-30244766)
chr7 (504-577)||(36109010-36109083)
chr7 (518-625)||(19122738-19122845)
chr7 (504-588)||(34218116-34218200)
chr7 (512-588)||(37533092-37533168)
chr7 (504-588)||(40094856-40094940)
chr7 (504-588)||(45433233-45433317)
chr7 (507-574)||(36622955-36623022)
chr7 (507-581)||(41854630-41854703)
chr7 (504-589)||(36939814-36939899)
chr7 (507-588)||(40230373-40230454)
chr7 (243-343)||(9603522-9603622)
chr7 (243-343)||(9831093-9831193)
chr7 (509-573)||(10341829-10341893)
chr7 (504-588)||(22567121-22567204)
chr7 (504-588)||(36534866-36534950)
chr7 (504-588)||(41910676-41910760)
chr7 (225-308)||(46603761-46603842)
chr7 (234-287)||(4040895-4040948)
chr7 (284-341)||(29994620-29994677)
chr7 (504-588)||(47129087-47129171)
chr7 (522-588)||(6054570-6054636)
chr7 (515-577)||(20599317-20599379)
chr7 (504-566)||(36967333-36967395)
chr7 (512-577)||(14681510-14681575)
chr7 (504-577)||(24838795-24838868)
chr7 (515-627)||(37533406-37533519)
chr7 (505-562)||(40094502-40094559)
chr7 (225-341)||(16831565-16831681)
chr7 (225-343)||(18699990-18700108)
chr7 (520-577)||(30032575-30032632)
[»] chr2 (63 HSPs)
chr2 (225-341)||(11152224-11152346)
chr2 (504-627)||(28254279-28254403)
chr2 (505-577)||(28531407-28531479)
chr2 (505-588)||(962591-962674)
chr2 (504-588)||(6421377-6421461)
chr2 (505-588)||(42514642-42514725)
chr2 (225-299)||(2126183-2126257)
chr2 (509-587)||(7598606-7598684)
chr2 (523-581)||(40163462-40163520)
chr2 (504-577)||(38796311-38796384)
chr2 (504-588)||(15880255-15880339)
chr2 (504-588)||(16542441-16542525)
chr2 (528-588)||(28254194-28254254)
chr2 (504-588)||(36005962-36006045)
chr2 (512-588)||(36178687-36178763)
chr2 (512-588)||(37106188-37106264)
chr2 (504-588)||(38796702-38796786)
chr2 (505-577)||(40679722-40679794)
chr2 (509-588)||(1769889-1769968)
chr2 (504-569)||(36785664-36785729)
chr2 (507-588)||(40733512-40733593)
chr2 (512-588)||(14745749-14745825)
chr2 (504-588)||(31899508-31899592)
chr2 (512-588)||(41283557-41283633)
chr2 (509-627)||(7598225-7598344)
chr2 (505-607)||(12910221-12910324)
chr2 (505-588)||(33561533-33561616)
chr2 (505-588)||(37632679-37632762)
chr2 (504-598)||(6712968-6713062)
chr2 (507-589)||(37894773-37894855)
chr2 (512-577)||(5543091-5543156)
chr2 (504-588)||(15511577-15511659)
chr2 (504-561)||(31468855-31468912)
chr2 (512-588)||(5542707-5542783)
chr2 (505-577)||(9231242-9231314)
chr2 (505-589)||(33954342-33954426)
chr2 (512-588)||(36178351-36178427)
chr2 (512-576)||(37105924-37105988)
chr2 (505-588)||(33953853-33953936)
chr2 (504-575)||(37895156-37895227)
chr2 (504-570)||(29676895-29676961)
chr2 (507-573)||(35580820-35580886)
chr2 (503-588)||(29873619-29873704)
chr2 (504-540)||(3672711-3672747)
chr2 (504-588)||(12529110-12529194)
chr2 (520-627)||(33731656-33731764)
chr2 (507-587)||(40733878-40733958)
chr2 (505-574)||(42515005-42515078)
chr2 (505-580)||(5367448-5367523)
chr2 (508-571)||(29874122-29874185)
chr2 (503-566)||(30313169-30313232)
chr2 (503-573)||(30323455-30323525)
chr2 (504-588)||(31259698-31259785)
chr2 (504-544)||(3673077-3673117)
chr2 (504-560)||(6421296-6421352)
chr2 (528-588)||(6422126-6422186)
chr2 (505-563)||(16590881-16590940)
chr2 (225-336)||(37980372-37980483)
chr2 (503-546)||(43443106-43443149)
chr2 (530-576)||(36178265-36178311)
chr2 (505-588)||(41678449-41678534)
chr2 (301-342)||(4762058-4762099)
chr2 (505-571)||(23346228-23346296)
[»] scaffold0078 (2 HSPs)
scaffold0078 (504-588)||(5349-5433)
scaffold0078 (504-627)||(4974-5098)
[»] scaffold0402 (1 HSPs)
scaffold0402 (225-335)||(3012-3120)
[»] scaffold0734 (2 HSPs)
scaffold0734 (504-588)||(5769-5853)
scaffold0734 (504-577)||(5388-5461)
[»] scaffold0391 (2 HSPs)
scaffold0391 (504-627)||(1148-1272)
scaffold0391 (504-563)||(3092-3151)
[»] scaffold0702 (2 HSPs)
scaffold0702 (512-577)||(235-300)
scaffold0702 (504-588)||(596-680)
[»] scaffold0171 (1 HSPs)
scaffold0171 (504-588)||(17538-17622)
[»] scaffold0113 (1 HSPs)
scaffold0113 (501-580)||(39827-39906)
[»] scaffold0007 (1 HSPs)
scaffold0007 (225-336)||(176182-176293)
[»] scaffold0504 (1 HSPs)
scaffold0504 (504-588)||(10193-10277)
[»] scaffold1786 (1 HSPs)
scaffold1786 (225-316)||(400-491)
[»] scaffold0027 (1 HSPs)
scaffold0027 (508-577)||(47356-47425)


Alignment Details
Target: chr8 (Bit Score: 104; Significance: 2e-51; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 16524293 - 16524444
Alignment:
Q  23 ccaaaaataaaagaaatattctttgtctttagccaccaataagaaagacgttttatattgtttaaagatattaatctgcttattcannnnnnnnnnnnga 122  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||            ||    
T  16524293 ccaaaaataaaagaaatattctttgtctttagccaccaataagaaagacgctttatattgcttaaagatattaatctgcttattcatttttattttttga 16524392  T
Q  123 ggggagaaaattcatttcatatcattagataatgagaaatgctaatttgtgc 174  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  16524393 ggggataaaattcatttcatatcattagataatgagaaatgctaatttgtgc 16524444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 225 - 309
Target Start/End: Complemental strand, 25267103 - 25267019
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaac 309  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||    
T  25267103 attgtgcattcgatattatagaaatttaaaatcttatcatttcaagacataatttatgatttaattccatttttagattcttaac 25267019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 9608738 - 9608821
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||| ||||||    
T  9608738 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaa 9608821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 627
Target Start/End: Original strand, 34834868 - 34834992
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||| ||||| ||||||||||||||||||| ||||| |  |||||||||| ||||| ||||||||||||||||||||||| | |||| |||| ||    
T  34834868 ttgttgtgtacaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgccttaagg 34834967  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  34834968 ttttgggtaagagtgtggtgtctct 34834992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 41972151 - 41972219
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  41972151 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagt 41972219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 510 - 588
Target Start/End: Complemental strand, 45122070 - 45121992
Alignment:
Q  510 tgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||||||||||||||||||| ||| |  ||||||||||||||||||||||||||||| ||||||||||    
T  45122070 tgtgcaagtgtgagttatatgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaa 45121992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 607
Target Start/End: Complemental strand, 6877029 - 6876924
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatat-gtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagg 601  Q
    ||||||||||||||| |||||||||| ||||||||||||||| | ||||||||||||||||| |||||| ||||||||| |||| | | |||| ||||||    
T  6877029 ttgttgtgtgcaagtgtgagttatatagtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccatacactcattgtcttagg 6876930  T
Q  602 gttttg 607  Q
    ||||||    
T  6876929 gttttg 6876924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 3038456 - 3038372
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||| | ||| ||||||    
T  3038456 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaa 3038372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 512 - 627
Target Start/End: Original strand, 3669687 - 3669803
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcat 610  Q
    ||||||| |||||||||||||||||||| |||| |  |||||||||||||||| |||||||||||| |||||||||| | |||| |||| |||||||  |    
T  3669687 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggt 3669786  T
Q  611 aagaatatggtgtctct 627  Q
    |||| | ||||||||||    
T  3669787 aagagtgtggtgtctct 3669803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 8918930 - 8918846
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||| |||||||||||| |||||   ||||||||||||||||||||||||||||| ||| ||||||    
T  8918930 ttgttgtgtgcaagtgtgagttacatgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggacccataaa 8918846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 9309347 - 9309420
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  |||||| ||||||||| ||||||||||||    
T  9309347 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaatgttgaacaccttataagtaaga 9309420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 507 - 588
Target Start/End: Original strand, 40518577 - 40518658
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| ||||| |||||||||||||||||||| |||||| ||||||||||||||||| |||||| ||||| ||| ||||||    
T  40518577 ttgtgttcaagtgtgagttatatgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggacccataaa 40518658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 229 - 305
Target Start/End: Complemental strand, 2233937 - 2233861
Alignment:
Q  229 tgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattct 305  Q
    |||||||||||||||| ||||||||||| |||||||||||| ||| |||||| |||||||||| ||||||| |||||    
T  2233937 tgcattcaatattctaaaaatttaaaattttatcttttcaaaacaaaatttatgatttaattctatttttatattct 2233861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 573
Target Start/End: Complemental strand, 4154831 - 4154763
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    |||||||||||||| |||||||||||||||||||| |||||| ||||  ||||||||||||||||||||    
T  4154831 tgttgtgtgcaagtgtgagttatatgtcccacatctgatagaaaagtggaggttgaacactttataagt 4154763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 5420643 - 5420727
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||| ||  |||||||||||||||||||||||  |||||||||||||||  |||||||||||| ||||||||||    
T  5420643 ttgttgtatgcaagtgtgtattatatgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaa 5420727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 507 - 577
Target Start/End: Complemental strand, 1514078 - 1514008
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||| |||||||||||||||| |||||||||||||| |  |||||||||||||||| ||||||||||||    
T  1514078 ttgtgtacaagtatgagttatatatcccacatcggataaaagagtaaaggttgaacaccttataagtaaga 1514008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 507 - 577
Target Start/End: Complemental strand, 45122220 - 45122150
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||||| ||||||||||||    
T  45122220 ttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaaga 45122150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 147443 - 147527
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| ||| |||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||| ||||| ||| ||||||    
T  147443 ttgttgcgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaa 147527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 25561982 - 25561898
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| | ||||| ||||||||||||||||||||||||| |  |||||| ||||||||| |||||||||||| ||| ||||||    
T  25561982 ttgttgtctacaagtgtgagttatatgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaa 25561898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 30359601 - 30359685
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||||| |||||| |||| |  |||||| ||||||||| |||||||||||| ||||||||||    
T  30359601 ttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggactcataaa 30359685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 32162806 - 32162886
Alignment:
Q  234 tcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtg 314  Q
    |||||||| ||||||| ||||||||||| ||||||| | | |||||| |||||||||||||||||| |||||||| |||||    
T  32162806 tcaatattttagaaatgtaaaatcttatattttcaaaataaaatttatgatttaattccatttttagattcttaatttgtg 32162886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 502 - 573
Target Start/End: Complemental strand, 4154448 - 4154377
Alignment:
Q  502 aattgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    ||||||||||||||| | |||||||||||||| ||||| |||||| ||||  ||||||||||||||||||||    
T  4154448 aattgttgtgtgcaaatgtgagttatatgtcctacatcagatagaaaagtggaggttgaacactttataagt 4154377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 41416321 - 41416264
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  41416321 tgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaaga 41416264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 45123002 - 45123080
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||| ||||||||||||||||||||||||| |  |||||||||| ||||| |  ||||||||||||| ||||||    
T  45123002 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacacct--taagtaagatgacccataaa 45123080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 3670060 - 3670136
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||| ||||| ||||||||| || ||| ||||||    
T  3670060 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggacccataaa 3670136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 8794103 - 8794187
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||||| ||||||||||| |  | |||| ||||||||  |||||||||||| ||||||||||    
T  8794103 ttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaa 8794187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 30359263 - 30359347
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||||| ||||||||||| |  |||||| ||||||||| ||||||| |||| ||| ||||||    
T  30359263 ttgttgtgtacaagtgtgagttatatgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaa 30359347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 33113533 - 33113449
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||||||| |||||||||| |  ||||||||||||||   |||||||||||| ||| ||||||    
T  33113533 ttgttgtgtacaagtttgagttatatgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaa 33113449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 34835217 - 34835285
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||||||||| |||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  34835217 tgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 34835285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 504 - 563
Target Start/End: Original strand, 147821 - 147880
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaaca 563  Q
    ||||||||||||||| |||||||||||||||||||| |||| | ||||||| ||||||||    
T  147821 ttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaaaagtaaatgttgaaca 147880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 9620841 - 9620758
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| ||||||||||||| |||| | |||||| ||||| | ||||| |||||||||||| ||| ||| ||||||    
T  9620841 tgttgtgtgcaagtgtgagttatatgtctcacaacagatagaaaagtagaagttgatcactttataagtgagaggacccataaa 9620758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 18372416 - 18372349
Alignment:
Q  510 tgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||| |||| ||||||||||||| ||||||||||| |  |||||||||||||||| ||||||||||||    
T  18372416 tgtgaaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaaga 18372349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 510 - 577
Target Start/End: Complemental strand, 18372859 - 18372792
Alignment:
Q  510 tgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||| |||| ||||||||||||| ||||||||||| |  |||||||||||||||| ||||||||||||    
T  18372859 tgtgaaagtgtgagttatatgtcacacatcggataaaatagtaaaggttgaacaccttataagtaaga 18372792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 577
Target Start/End: Complemental strand, 25561792 - 25561737
Alignment:
Q  522 agttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  25561792 agttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaaga 25561737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 9482768 - 9482686
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| |||||  ||||||||||| |||||| ||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  9482768 ttgttgtgtacaagt--gagttatatgttccacatgggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 9482686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 504 - 589
Target Start/End: Complemental strand, 37544656 - 37544571
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    ||||||||  ||||| ||||||||| ||| ||||||||||| |  |||||||||||||||| ||||||| |||| ||| |||||||    
T  37544656 ttgttgtgcacaagtgtgagttataagtcgcacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaat 37544571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 70424 - 70356
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||||||||||||| |  |||||| ||||||||  |||||||||||| ||| ||||||    
T  70424 tgagttatatgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaa 70356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 588
Target Start/End: Complemental strand, 18373077 - 18373013
Alignment:
Q  524 ttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||| ||||||| |  |||||||||||||||| |||||| ||||| ||||||||||    
T  18373077 ttatatgtcccacttcggataaaatagtaaaggttgaacaccttataaataagaggactcataaa 18373013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 569
Target Start/End: Complemental strand, 20995566 - 20995502
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttat 569  Q
    |||||||||||||| ||||||||||||| |||||| |||| | ||||  ||||||||||||||||    
T  20995566 tgttgtgtgcaagtgtgagttatatgtctcacatcagataaaaaagtggaggttgaacactttat 20995502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 33831971 - 33832043
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||||| ||||||||||||| ||| | | | ||| ||||| | ||||||||||||||||||||||    
T  33831971 tgttgtgtgcaagtgtgagttatatgtctcacgttgaagagaaaagtagaagttgaacactttataagtaaga 33832043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 501 - 571
Target Start/End: Original strand, 5274764 - 5274834
Alignment:
Q  501 gaattgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataa 571  Q
    ||||| ||||||||||||||||||||||||| | |||| | ||| | ||| | ||||||||||||||||||    
T  5274764 gaattattgtgtgcaagtatgagttatatgttctacattgaataaaaaaggagaggttgaacactttataa 5274834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 9308970 - 9309055
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcc--cacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| ||||||||||||||  |||||| |||| |  |||||| ||||||||  |||||||||||| ||| ||||||    
T  9308970 tgttgtgtgcaagtgtgagttatatgtcctacacatcagataaaagagtaaaagttgaacatgttataagtaagaggacccataaa 9309055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 575
Target Start/End: Original strand, 40518061 - 40518134
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggat--agagaagtaaaggttgaacactttataagtaa 575  Q
    ||||||||| ||||| |||||||||||| |||||| ||||  | | ||||||||||||||||| ||||||||||    
T  40518061 ttgttgtgttcaagtgtgagttatatgttccacattggataaaaaaaagtaaaggttgaacaccttataagtaa 40518134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 1014029 - 1013964
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||| |||||||||||| |||||||||||| |  |||||| |||||||||  |||||||||||    
T  1014029 tgcaagtgtgagttatatgttccacatcggataaaatagtaaaagttgaacaccctataagtaaga 1013964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 1014403 - 1014338
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||| |||||||||||||  ||||| |||| |  |||||||||||||||| ||||||||||||    
T  1014403 tgcaagtgtgagttatatgtcatacatcagataaaatagtaaaggttgaacaccttataagtaaga 1014338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 561
Target Start/End: Original strand, 6731904 - 6731953
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaa 561  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||    
T  6731904 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 535 - 588
Target Start/End: Original strand, 9609108 - 9609161
Alignment:
Q  535 acatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||| |||||| ||||||||||||||||  |||||||||||||||| ||||||    
T  9609108 acatcagatagaaaagtaaaggttgaacatcttataagtaagatgacccataaa 9609161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 549 - 598
Target Start/End: Complemental strand, 40579627 - 40579578
Alignment:
Q  549 agtaaaggttgaacactttataagtaagatgactcataaatttattgctt 598  Q
    |||||||||||||||| |||||||||||| ||| |||||| |||||||||    
T  40579627 agtaaaggttgaacaccttataagtaagaggacccataaacttattgctt 40579578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 520 - 577
Target Start/End: Complemental strand, 43398221 - 43398164
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||| || || |||||||||| ||||||||||||||||| |||||| |||||    
T  43398221 tgagttatatatctcatatcggatagaaaagtaaaggttgaacaccttataaataaga 43398164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 45121821 - 45121749
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||| ||||| |||||| | |||||||||||||||| |  |||||||||||| ||| ||||||||||||    
T  45121821 ttgttgtgtacaagtgtgagttgt-tgtcccacatcggataaaagagtaaaggttgatcaccttataagtaaga 45121749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 572
Target Start/End: Original strand, 5915864 - 5915931
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataag 572  Q
    ||||||||||||||| |||||||||||||| |||| ||||| | | ||||| ||| |||||||||||||    
T  5915864 ttgttgtgtgcaagtgtgagttatatgtcctacattggataaaaatgtaaa-gtttaacactttataag 5915931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 576
Target Start/End: Complemental strand, 18380167 - 18380111
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaag 576  Q
    |||||||||| |||||||||| ||| |  |||||||||||||||| |||||||||||    
T  18380167 tgagttatatatcccacatcgaataaaatagtaaaggttgaacaccttataagtaag 18380111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 545
Target Start/End: Complemental strand, 18645752 - 18645712
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatag 545  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  18645752 tgttgtgtgcaagtgtgagttatatgtctcacatcggatag 18645712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 564
Target Start/End: Original strand, 30441081 - 30441133
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacac 564  Q
    ||||||| |||||||||||||||||||||| || |  ||||||||||||||||    
T  30441081 tgcaagtgtgagttatatgtcccacatcggctaaaatagtaaaggttgaacac 30441133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 588
Target Start/End: Complemental strand, 3037853 - 3037790
Alignment:
Q  525 tatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| |||||||||||  |  |||||| ||||||||| |||||||||||| ||||||||||    
T  3037853 tatatgttccacatcggatgaaatagtaaatgttgaacaccttataagtaagaggactcataaa 3037790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 344
Target Start/End: Original strand, 5493938 - 5494053
Alignment:
Q  229 tgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgcacaa 328  Q
    |||||||||||   || || |||||||| |||||||||||| ||| || |||   |||||| |||||||||| ||||||||| ||| | | |  ||||||    
T  5493938 tgcattcaataaagtaaaagtttaaaattttatcttttcaatacaaaagttattttttaatcccatttttaacttcttaactcgtgcccttaaggcacaa 5494037  T
Q  329 gttaacattacccttg 344  Q
    |||||||| |||||||    
T  5494038 gttaacatgacccttg 5494053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 11190630 - 11190536
Alignment:
Q  249 tttaaaatcttatctttt--caagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgcacaagttaacattaccc 341  Q
    ||||||||||||| ||||  |||||||  ||||| | |||||||| |||||||  || |||||| |||||||||| |||||||||| ||| ||||    
T  11190630 tttaaaatcttattttttttcaagacaacatttatgttttaattctatttttagcttattaactcgtgtcataagagcacaagttagcatgaccc 11190536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 342
Target Start/End: Complemental strand, 36068066 - 36068023
Alignment:
Q  299 aaattcttaacttgtgtcataagcgcacaagttaacattaccct 342  Q
    ||||||||||| ||||||||||| ||||||||||||||| ||||    
T  36068066 aaattcttaacatgtgtcataagggcacaagttaacatttccct 36068023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 39907971 - 39908074
Alignment:
Q  223 atattgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagc 322  Q
    ||||| ||||||  ||||| |||||||||||||| ||||||||| || | | |||||| | ||||||| ||||||||  || |||||||| ||| ||||     
T  39907971 atattatgcatttcatattttagaaatttaaaatgttatctttttaaaataaaatttatgttttaatttcatttttagctttttaacttgagtcttaagg 39908070  T
Q  323 gcac 326  Q
    ||||    
T  39908071 gcac 39908074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 503 - 573
Target Start/End: Complemental strand, 9620455 - 9620385
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    |||||||||||||||| | |||||||| |||||| | | ||||| ||||  || |||||||||||||||||    
T  9620455 attgttgtgtgcaagtgtcagttatatatcccacgttgaatagaaaagtggagtttgaacactttataagt 9620385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 506 - 588
Target Start/End: Original strand, 12283867 - 12283949
Alignment:
Q  506 gttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||| | ||||||||||||||| || |||| | ||||||| |||||| |  ||| |||||| ||||| ||||||    
T  12283867 gttgtgtgcaagtgtaagttatatgtcccacgtcagataaaaaagtaaatgttgaatatcttaaaagtaaaatgacacataaa 12283949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 514 - 588
Target Start/End: Complemental strand, 18372758 - 18372685
Alignment:
Q  514 caagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||| ||| |||||||| |||  ||||||| |  |||||||||||||||| |||||||||||| ||||||||||    
T  18372758 caagtgtgatttatatgttccatttcggataaaatagtaaaggttgaacac-ttataagtaagaggactcataaa 18372685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 526 - 588
Target Start/End: Original strand, 45122638 - 45122700
Alignment:
Q  526 atatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||| ||| ||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  45122638 atatggcccgcatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 45122700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 624
Target Start/End: Complemental strand, 43274945 - 43274824
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    |||||||||  |||| ||||||||||||  |||||| |||| |  ||||||||||||| |  |||||||||||| ||| ||||||  ||||| |||| ||    
T  43274945 ttgttgtgtataagtgtgagttatatgtttcacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacctattgtcttaagg 43274846  T
Q  603 ttttgcataagaatatggtgtc 624  Q
    |||||  ||||| | |||||||    
T  43274845 ttttgagtaagagtgtggtgtc 43274824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 522 - 598
Target Start/End: Complemental strand, 18372142 - 18372066
Alignment:
Q  522 agttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgctt 598  Q
    |||||||||| |||||||  ||| |  |||||||||||||||| |||||||||||| ||  |||||| | |||||||    
T  18372142 agttatatgtaccacatccaataaaatagtaaaggttgaacaccttataagtaagaggatccataaactcattgctt 18372066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 4e-46; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 225 - 343
Target Start/End: Complemental strand, 12185780 - 12185662
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||  ||    
T  12185780 attgtgcattcaatattctagaaattcaaaatcttatcttttcaagacataatttatgatttaattccatttttaaattcttaacttgtgtcttaaaagc 12185681  T
Q  325 acaagttaacattaccctt 343  Q
    ||||||||||| |||||||    
T  12185680 acaagttaacactaccctt 12185662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 9456282 - 9456165
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| ||||||||||||||   | || ||    
T  9456282 attgtgcattcaatagtctagaaatttaaaatcttatattttcaagacataatttataatttaattccatttttatattcttaacttgtgctcttagggc 9456183  T
Q  325 acaagttaacattaccct 342  Q
    ||||||||||| ||||||    
T  9456182 acaagttaacactaccct 9456165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 505 - 627
Target Start/End: Complemental strand, 10074528 - 10074405
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggt 603  Q
    |||||||||||||| ||||||| | ||||||||||||||||| ||||||||||||||||| |||||||||||| ||| |||||| | |||| |||| |||    
T  10074528 tgttgtgtgcaagtgtgagttagaggtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggt 10074429  T
Q  604 tttgcataagaatatggtgtctct 627  Q
    ||||  ||||| | ||||||||||    
T  10074428 tttgggtaagagtgtggtgtctct 10074405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 2580038 - 2579954
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  2580038 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaa 2579954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 10074156 - 10074073
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||  |||||||||| |||||||||||||||| ||||||| ||||||||| |||||||||||| ||| ||||||    
T  10074156 tgttgtgtgcaagggtgagttatatatcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaa 10074073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 511 - 588
Target Start/End: Complemental strand, 593868 - 593791
Alignment:
Q  511 gtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||| |||||| |||||||||||||||||| |  |||||||||||||||| |||||||||||| ||||||||||    
T  593868 gtgcaagtgtgagttgtatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaa 593791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 580
Target Start/End: Original strand, 6071123 - 6071200
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatga 580  Q
    |||||||||||||||| ||||||||||||||||||| | ||||| ||||  |||||||||||||||||||| ||||||    
T  6071123 attgttgtgtgcaagtgtgagttatatgtcccacattgaatagaaaagtggaggttgaacactttataagtgagatga 6071200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 2378126 - 2378202
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  2378126 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 2378202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 2578608 - 2578525
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||||||||||| |||||| |  ||||||||||||||||||||||||||||| ||| ||||||    
T  2578608 ttgttgtgtacaagtgtgagttatatgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagaggacccataaa 2578525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 627
Target Start/End: Original strand, 3409259 - 3409375
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcat 610  Q
    ||||||| |||||||||||||||||||| |||| |  |||||||||||||||| |||||||||||| ||| |||||| | |||| |||| |||||||  |    
T  3409259 tgcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggt 3409358  T
Q  611 aagaatatggtgtctct 627  Q
    |||| | ||||||||||    
T  3409359 aagagtgtggtgtctct 3409375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 16107670 - 16107754
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||||  ||||||||||| | ||||||||||| ||||| |||||||||||| ||||||||||    
T  16107670 ttgttgtgtacaagtgtgagttatatgtgtcacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaa 16107754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 26544049 - 26544125
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  26544049 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaa 26544125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 29518503 - 29518579
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  29518503 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 29518579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 29518920 - 29518996
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  29518920 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 29518996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 32741179 - 32741255
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  32741179 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 32741255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 503 - 588
Target Start/End: Original strand, 8481918 - 8482002
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||||| |||||||||||||| ||||| |||| | ||||  |||||||||||||||||| | ||||||||||||||    
T  8481918 attgttgtgtgcaagtgtgagttatatgtcc-acatcagatataaaagtggaggttgaacactttataaatgagatgactcataaa 8482002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 10073779 - 10073709
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||||| | ||||||||||||||||||||  ||| ||||||||||||||||| ||||||||||||    
T  10073779 tgttgtgtgcaagtgttagttatatgtcccacatcgg--agaaaagtaaaggttgaacaccttataagtaaga 10073709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 2377746 - 2377830
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||  ||||| |||||||||||||||||||||| || |  |||||||||||||||| |||||||||||| ||| ||||||    
T  2377746 ttgttgtgcacaagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaa 2377830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 9062499 - 9062431
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||||||||||||| |  |||||||||||||||  |||||||||||| ||||||||||    
T  9062499 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggactcataaa 9062431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 10911558 - 10911642
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaa-gtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| ||||||| |||||||||||||| ||||| |||| | || ||||||||||||||| |||||||||||| ||||||||||    
T  10911558 tgttgtatgcaagtgtgagttatatgtcctacatcagataaaaaaagtaaaggttgaacaccttataagtaagaggactcataaa 10911642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 14748496 - 14748420
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||| ||||| ||| ||||||    
T  14748496 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaa 14748420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 32460730 - 32460662
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||||||||| ||| |  |||||||||||||||| |||||||||||| ||||||||||    
T  32460730 tgagttatatgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaa 32460662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 35210204 - 35210280
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  35210204 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 35210280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 10068216 - 10068326
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||||||||  || || |||||||||||||| ||||  | |||||||| |||||| | ||||||| ||||||||  || |||||||||||| |||| ||    
T  10068216 attgtgcatttcatgttttagaaatttaaaattttattctgtcaagacaaaatttatgttttaatttcatttttaccttattaacttgtgtcctaagggc 10068315  T
Q  325 acaagttaaca 335  Q
    |||||||||||    
T  10068316 acaagttaaca 10068326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 3441291 - 3441202
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtg 314  Q
    ||||||||||  ||||| ||||| ||||||||||||| ||||||||| | |||||| | ||||||| ||||||||  |||||||||||||    
T  3441291 attgtgcatttcatattttagaactttaaaatcttatattttcaagataaaatttatgttttaatttcatttttaccttcttaacttgtg 3441202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 502 - 571
Target Start/End: Original strand, 33605644 - 33605713
Alignment:
Q  502 aattgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataa 571  Q
    ||||||||||||||||| |||| |||||||| |||||| |||||| ||||  ||||||||||||||||||    
T  33605644 aattgttgtgtgcaagtgtgagctatatgtctcacatcagatagaaaagtggaggttgaacactttataa 33605713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 1127368 - 1127436
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||| ||||||||||| || |  |||||||||||||||| |||||||||||| ||||||||||    
T  1127368 tgagttatatatcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaa 1127436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 627
Target Start/End: Original strand, 1846748 - 1846864
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcat 610  Q
    ||||||| ||| || |||||| ||||||||||| |  |||||||||||||||| ||||||||||||  || |||||||  |||| |||| ||||||| ||    
T  1846748 tgcaagtgtgaattctatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaaggttttggat 1846847  T
Q  611 aagaatatggtgtctct 627  Q
    |||| | ||||||||||    
T  1846848 aagagtgtggtgtctct 1846864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 5832192 - 5832108
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||  ||||| | ||||||||||||||||| ||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  5832192 ttgttgtgcacaagtgtaagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 5832108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 16108055 - 16108139
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||||| ||||||| |||| |  |||||| ||||||||| |||||||||||| ||| ||||||    
T  16108055 ttgttgtgtacaagtgtgagttatatgttccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacccataaa 16108139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 505 - 627
Target Start/End: Complemental strand, 12092647 - 12092524
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggt 603  Q
    |||||||||||||  || |||| ||||||||||||||||||| ||||  ||||||| |||||||||||| ||| ||  |||||| | |||| |||| |||    
T  12092647 tgttgtgtgcaagggtgtgttagatgtcccacatcggatagaaaagtggaggttgagcactttataagtgagaggatccataaactcattgccttaaggt 12092548  T
Q  604 tttgcataagaatatggtgtctct 627  Q
    ||||  ||||| | ||||||||||    
T  12092547 tttgagtaagactgtggtgtctct 12092524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 577
Target Start/End: Complemental strand, 1950340 - 1950278
Alignment:
Q  515 aagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||| ||||||||||||||||||||||||| |  |||||||||||||||| ||| ||||||||    
T  1950340 aagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaaga 1950278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 512 - 574
Target Start/End: Original strand, 3058226 - 3058288
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagta 574  Q
    ||||||| | ||||||||||||||||||||||| |  |||||||||||||||| |||||||||    
T  3058226 tgcaagtgttagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagta 3058288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 508 - 585
Target Start/End: Original strand, 33605971 - 33606048
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcat 585  Q
    ||||||||| | | ||||||||||||||||||| ||||| ||||  |||||||||||||||||| | | |||||||||    
T  33605971 tgtgtgcaaatgtaagttatatgtcccacatcgaatagaaaagtggaggttgaacactttataattgacatgactcat 33606048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 572
Target Start/End: Complemental strand, 2579271 - 2579203
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataag 572  Q
    ||||||||| ||||| | ||||||||||||||||||||||| |  |||||| ||||||||| |||||||    
T  2579271 ttgttgtgtacaagtgttagttatatgtcccacatcggataaaagagtaaaagttgaacaccttataag 2579203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 16454567 - 16454651
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||| ||||||||||| |||| |  | |||| ||||||||| |||||||||||| ||| ||||||    
T  16454567 ttgttgtgtacaagtgtgagttatgtgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaa 16454651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 16454899 - 16454983
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||| | |||||||| ||||||||||| |||| |  |||||||||||||||| |||||||||| | ||| ||||||    
T  16454899 ttgttgtgtacaaatgtgagttatgtgtcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaa 16454983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 17135219 - 17135151
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||| ||||||||||||||||||||| ||| || || ||||||| |||| || |||||||    
T  17135219 tgagttatatgtctcacatcggatagagaagtaaatgtttaataccttataagcaagaggattcataaa 17135151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 237 - 313
Target Start/End: Complemental strand, 25070447 - 25070371
Alignment:
Q  237 atattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgt 313  Q
    ||||| |||||||||||||||||||||||| |||||| |||||| |  ||| ||| |||||||  ||||||||||||    
T  25070447 atattttagaaatttaaaatcttatcttttgaagacaaaatttatgtcttatttctatttttatcttcttaacttgt 25070371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 527 - 589
Target Start/End: Original strand, 2975567 - 2975629
Alignment:
Q  527 tatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    |||||||||||||  ||||| ||||||| ||||||||| ||||||| |||||||| |||||||    
T  2975567 tatgtcccacatcaaatagaaaagtaaatgttgaacaccttataagcaagatgacccataaat 2975629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 577
Target Start/End: Complemental strand, 6999951 - 6999889
Alignment:
Q  515 aagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||| |||||||||||||| |||||||||| | ||||||| ||||||||| ||||| ||||||    
T  6999951 aagtgtgagttatatgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaaga 6999889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 250 - 308
Target Start/End: Complemental strand, 10483464 - 10483406
Alignment:
Q  250 ttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaa 308  Q
    |||||||||||| ||||||||||| |||||| | ||||||||||||||| | |||||||    
T  10483464 ttaaaatcttatattttcaagacaaaatttatgttttaattccatttttcatttcttaa 10483406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 627
Target Start/End: Complemental strand, 2579642 - 2579534
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcataagaatat 618  Q
    ||||||||||||||||||||||| | | |||||||||| | | || |||||||||||| | | |||||| | |||| |||| |||||||  ||| | |||    
T  2579642 tgagttatatgtcccacatcggacaaaaaagtaaaggtcggataccttataagtaagagggcccataaactcattgccttaaggttttgggtaaaagtat 2579543  T
Q  619 ggtgtctct 627  Q
    |||||||||    
T  2579542 ggtgtctct 2579534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 3409660 - 3409736
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| |||||||||||| ||||||| |||| |  |||||| ||||||||  |||||||||||| ||| ||||||    
T  3409660 tgcaagtgtgagttatatgtaccacatcagataaaatagtaaaagttgaacatcttataagtaagaggacccataaa 3409736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 3415466 - 3415534
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||||||||  ||| |  ||||||||||||||||  ||||||||||| ||| ||||||    
T  3415466 tgagttatatgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaa 3415534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 5958769 - 5958685
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||| |||||||| | ||||||||||||   |||||||||| |  |||||||||||||||| |||||| |||||  |||||||||    
T  5958769 ttgtggtgtgcaattgtgagttatatgtgttacatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaa 5958685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 539
Target Start/End: Complemental strand, 7588390 - 7588355
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatc 539  Q
    ||||||||||||||| ||||||||||||||||||||    
T  7588390 ttgttgtgtgcaagtgtgagttatatgtcccacatc 7588355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 2578999 - 2578928
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||| |||||| ||| ||||||||||| ||||||||| | ||||||| |||||| || |||||| |||||    
T  2578999 tgttgtgagcaagtgtgatttatatgtccctcatcggata-aaaagtaaatgttgaataccttataaataaga 2578928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 225 - 343
Target Start/End: Original strand, 13425 - 13543
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||| | | || ||    
T  13425 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttatgatttaattgcatttttagattcttaacttgtgcccttagggc 13524  T
Q  325 acaagttaacattaccctt 343  Q
    |||||||| || |||||||    
T  13525 acaagttagcactaccctt 13543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 2e-38; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 35075881 - 35075998
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||||| ||||||| ||||||||||| |||| |||| ||    
T  35075881 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacaaaaattatgatttaattctatttttatattcttaacttatgtcttaagggc 35075980  T
Q  325 acaagttaacattaccct 342  Q
    ||| ||||||||||||||    
T  35075981 acacgttaacattaccct 35075998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 1028682 - 1028599
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| ||||||    
T  1028682 tgttgtgtacaagtgtgagttatatgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaa 1028599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 299481 - 299565
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||| |||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||||| ||||||    
T  299481 ttgttgtgcgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaa 299565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 505 - 581
Target Start/End: Complemental strand, 36568732 - 36568656
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgac 581  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||| |||||||    
T  36568732 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgac 36568656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 13415925 - 13415842
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  13415925 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggacccataaa 13415842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 41632775 - 41632858
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| | ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||    
T  41632775 tgttgtgtgcaagtgtaagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaa 41632858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 12662818 - 12662745
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||| |||||||||||||    
T  12662818 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacattttataagtaaga 12662745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 503 - 588
Target Start/End: Original strand, 31509614 - 31509699
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||||| ||||||||||||| ||||||||||||| ||||  ||||||| |||||||||||| ||| ||||||||||    
T  31509614 attgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggactcataaa 31509699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 589
Target Start/End: Original strand, 15370091 - 15370176
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |  |||||||||||||||  |||||||||||| ||| |||||||    
T  15370091 ttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaat 15370176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 36492383 - 36492310
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||| ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  36492383 ttgttgtttgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaaga 36492310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 6224188 - 6224272
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||||||||| ||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  6224188 ttgttgtgtacaagtgtgagttatatgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 6224272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 40296477 - 40296397
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||| ||||||||||||||||||||||||| |  || ||||||||||||| |||||||||||| ||| ||||||    
T  40296477 tgtgtgcaagtgtgagttatatgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaa 40296397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 507 - 577
Target Start/End: Original strand, 35150002 - 35150072
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||| ||||||||||||||||||||||||| |  ||| |||||||||||| ||||||||||||    
T  35150002 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtcaaggttgaacaccttataagtaaga 35150072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 35914841 - 35914914
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||  |||||||||||||||||| ||||||||||| |  ||||||||||||||| |||||||||||||    
T  35914841 ttgttgtgtataagtatgagttatatgtcacacatcggataaaagagtaaaggttgaacattttataagtaaga 35914914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 627
Target Start/End: Original strand, 623818 - 623934
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcat 610  Q
    ||||||| ||||||||||||| ||||||||||| |  |||||||||||||||||||| ||||||| |||  |||||| |||| | |||| |||||||  |    
T  623818 tgcaagtgtgagttatatgtctcacatcggatataatagtaaaggttgaacactttacaagtaagttgagccataaacttatagccttaaggttttgagt 623917  T
Q  611 aagaatatggtgtctct 627  Q
    |||| | ||||||||||    
T  623918 aagagtgtggtgtctct 623934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 624196 - 624272
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||| | ||| |  |||||||||||||||| |||||||||||||||| ||||||    
T  624196 tgcaagtgtgagttatatgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgacccataaa 624272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 3295176 - 3295097
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||| ||||| ||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  3295176 tgtgtgcaagtgtgagt-atatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaa 3295097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 26074311 - 26074239
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||||| ||||||||||||| ||||||||||| | ||||||||||||||||| | ||| ||||||    
T  26074311 tgttgtgtgcaagtgtgagttatatgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaaga 26074239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 26074948 - 26074864
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||||||||||||||||| |  ||||||||||||||||  |||||||| || ||| ||||||    
T  26074948 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggacccataaa 26074864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 26075328 - 26075244
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||| ||||||||| ||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  26075328 ttgttgtgtacaagtgtgatttatatgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 26075244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 34753191 - 34753107
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||| | | ||||||||||||||||| ||||||| ||||||| ||||||||| |||||||||||| ||| ||||||    
T  34753191 ttgttgtgtacaaatgtaagttatatgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaa 34753107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 596
Target Start/End: Complemental strand, 35168004 - 35167912
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgc 596  Q
    ||||||||| |||||||||||||| | || |||||| |||| |  |||||||||||||||| ||||||||| |||||| ||||||| ||||||    
T  35168004 ttgttgtgtacaagtatgagttatgtatctcacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataaatctattgc 35167912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 42405762 - 42405678
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||||||| |||||||||| |  |||||||||||||||| ||| |||||| | ||||||||||    
T  42405762 ttgttgtgtacaagtgtgagttatatgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaa 42405678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 42508604 - 42508688
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||| |||||| |||||||||||||||| ||||||||||| ||||  | |||||||||| ||||||||||    
T  42508604 ttgttgtgtacaagtgtgaattatatatcccacatcggatagaaaagtaaaggttaaacatctaataagtaagaggactcataaa 42508688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 11417141 - 11417070
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||||||  ||||||||||| |||||||||||| |  |||||||||||||||| ||||||||||||    
T  11417141 ttgttgtgtgcaagt--gagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaaga 11417070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 588
Target Start/End: Complemental strand, 18603276 - 18603202
Alignment:
Q  514 caagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||| |||||||||||||||||||| |||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  18603276 caagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 18603202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 514 - 588
Target Start/End: Original strand, 26074320 - 26074394
Alignment:
Q  514 caagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||| |||||||||||||||||||| |||||| || ||||| |||||||| |||||||||||| ||| ||||||    
T  26074320 caagtgtgagttatatgtcccacatcagatagaaaactaaagattgaacaccttataagtaagaggacccataaa 26074394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 507 - 588
Target Start/End: Original strand, 26074607 - 26074688
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| ||||| |||||||||||| ||| |||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  26074607 ttgtgtacaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 26074688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 3295509 - 3295426
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||| |||| ||||| |||||| |||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  3295509 ttgttgtgtggaagtgtgagt-atatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 3295426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 627
Target Start/End: Original strand, 6500823 - 6500938
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcat 610  Q
    ||||||| |||||||||||||| |||||||||| |  |||||||||||||||| |||||| ||| | ||| |||||| | |||| |||| ||||||| ||    
T  6500823 tgcaagtgtgagttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataaataaaaggacccataaactcattgccttaaggttttggat 6500921  T
Q  611 aagaatatggtgtctct 627  Q
    |||| | ||||||||||    
T  6500922 aagagtgtggtgtctct 6500938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 9498804 - 9498736
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||| |||||| ||||||  |||||||||||||||| |||||||||||| ||| ||||||    
T  9498804 tgagttatatgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaa 9498736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 24489369 - 24489297
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||| ||||| |||||||||||||||||||| |||||| ||| ||||||| ||||| |||| |||||||    
T  24489369 tgttgtgttcaagtgtgagttatatgtcccacatcagatagaaaagaaaaggttaaacaccttattagtaaga 24489297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 25327927 - 25328011
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||  |||| |||||||||||||| |||||||||| |  |||||| ||||||||| |||||||||||| ||| ||||||    
T  25327927 ttgttgtgtctaagtgtgagttatatgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaa 25328011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 27502194 - 27502118
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||| ||||| |  |||||||||| ||||| |||||||||||| ||| ||||||    
T  27502194 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaa 27502118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 32487394 - 32487469
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  ||||||||||||||||  ||||||||||| ||| ||||||    
T  32487394 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac-ctataagtaagaggacccataaa 32487469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 39309677 - 39309749
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||| ||||||||||||||||||||||||||||||| |   ||||| ||||||||| |||||| |||||    
T  39309677 tgttgtgtacaagtatgagttatatgtcccacatcggataaaagggtaaatgttgaacacattataaataaga 39309749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 41170642 - 41170710
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||||||||||||| |  |||||||||||||||  |||||||||||| ||| ||||||    
T  41170642 tgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaa 41170710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 520 - 574
Target Start/End: Original strand, 38427556 - 38427610
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagta 574  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||  |||||||||    
T  38427556 tgagttatatgtcccacattggatagaaaagtaaaggttgaacatcttataagta 38427610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 596
Target Start/End: Original strand, 2411010 - 2411091
Alignment:
Q  515 aagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgc 596  Q
    |||| |||||||||||||| |||| ||||||||||||||| ||||||||  || |||||||||  || |||||| |||||||    
T  2411010 aagtgtgagttatatgtcctacattggatagagaagtaaaagttgaacatcttgtaagtaagagaacccataaacttattgc 2411091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 512 - 577
Target Start/End: Original strand, 6500451 - 6500515
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||| |||||||||||||| |||||||||| |  |||||||||||||||| ||||||||||||    
T  6500451 tgcaagtgtgagttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataagtaaga 6500515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 607
Target Start/End: Complemental strand, 5723949 - 5723853
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttg 607  Q
    ||||||| ||||||||||||||||||||||||| |  | |||| ||||||||| ||||| ||||||  || ||| ||||||||| |||| |||||||    
T  5723949 tgcaagtgtgagttatatgtcccacatcggataaaataataaaagttgaacacattatatgtaagagaacccattaatttattgtcttaaggttttg 5723853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 7802030 - 7802113
Alignment:
Q  237 atattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataag 321  Q
    ||||| |||||||||||||| ||||||||| |||||| |||||    ||||||||||||||||  ||||||||||||||| ||||    
T  7802030 atattttagaaatttaaaattttatctttt-aagacaaaatttgcattttaattccatttttaccttcttaacttgtgtcttaag 7802113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 627
Target Start/End: Original strand, 33747783 - 33747887
Alignment:
Q  524 ttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcataagaatatggtg 622  Q
    ||||||||||||||||||||| |  |||||||||| || ||||||||||||||| ||  |||||| | |||| |||| | ||||| |||||| | |||||    
T  33747783 ttatatgtcccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaactcattgccttaagattttggataagagtgtggtg 33747882  T
Q  623 tctct 627  Q
    |||||    
T  33747883 tctct 33747887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 565
Target Start/End: Complemental strand, 36522061 - 36522001
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacact 565  Q
    ||||||| |||||| |||||||||||||||||||| |||||| ||||  ||||||||||||    
T  36522061 tgttgtgcgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttgaacact 36522001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 577
Target Start/End: Original strand, 300954 - 301024
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||| ||||| || ||||||||||||||||| |||| |  ||||||||||||| || ||||||||||||    
T  300954 ttgtgtacaagtgtgggttatatgtcccacatcagataaaacagtaaaggttgaataccttataagtaaga 301024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 526 - 588
Target Start/End: Original strand, 31509745 - 31509807
Alignment:
Q  526 atatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||| ||||  ||||||| |||||||||||| ||| ||||||||||    
T  31509745 atatgtctcacatcggatagaaaagtggaggttgagcactttataagtgagaggactcataaa 31509807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 283 - 343
Target Start/End: Complemental strand, 31558232 - 31558172
Alignment:
Q  283 atttaattccatttttaaattcttaacttgtgtcataagcgcacaagttaacattaccctt 343  Q
    |||||||| |||||| | |||||||||||||||| |||| ||| ||||||||| |||||||    
T  31558232 atttaatttcattttaagattcttaacttgtgtcctaagtgcataagttaacactaccctt 31558172  T

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Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 540
Target Start/End: Original strand, 35150739 - 35150775
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcg 540  Q
    ||||||||||||||| |||||||||||||||||||||    
T  35150739 ttgttgtgtgcaagtgtgagttatatgtcccacatcg 35150775  T

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Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 540
Target Start/End: Original strand, 35151030 - 35151066
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcg 540  Q
    ||||||||||||||| |||||||||||||||||||||    
T  35151030 ttgttgtgtgcaagtgtgagttatatgtcccacatcg 35151066  T

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Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 36527250 - 36527202
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagt 551  Q
    |||||||||| ||||| |||||||||||||||||||| |||||| ||||    
T  36527250 attgttgtgtacaagtgtgagttatatgtcccacatcagatagaaaagt 36527202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 31559157 - 31559102
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataattta 280  Q
    |||||||||| | |||| ||| |||||||||| |||| ||||||||||||||||||    
T  31559157 attgtgcatttagtattttagcaatttaaaattttatgttttcaagacataattta 31559102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 514 - 589
Target Start/End: Original strand, 42524719 - 42524793
Alignment:
Q  514 caagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    ||||| ||| ||||||||| ||||||||||||| ||||||| ||||||||  |||| | ||||| |||||||||||    
T  42524719 caagtgtgaattatatgtctcacatcggatagaaaagtaaa-gttgaacatcttatgaataagaggactcataaat 42524793  T

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Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 534 - 627
Target Start/End: Complemental strand, 13786136 - 13786043
Alignment:
Q  534 cacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcataagaatatggtgtctct 627  Q
    ||||||||||| | |||| | ||||||||||||||||||||||||||| | ||||| ||||| |||| | ||||| |||||| | || |||||||    
T  13786136 cacatcggataaa-aagtgatggttgaacactttataagtaagatgacccgtaaatctattgtcttaagattttggataagagtgtgatgtctct 13786043  T

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Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 512 - 590
Target Start/End: Complemental strand, 26591068 - 26590990
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatt 590  Q
    ||||||| ||| ||| |||| ||| |||| || || ||||||||||||||||| |||||||||||| ||  ||||||||    
T  26591068 tgcaagtgtgatttaaatgttccatatcgaatcgaaaagtaaaggttgaacaccttataagtaagaggatccataaatt 26590990  T

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Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 575
Target Start/End: Original strand, 7768852 - 7768913
Alignment:
Q  514 caagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaa 575  Q
    ||||| |||||||||| ||| |||||||||| |  | |||||||||||||| ||||||||||    
T  7768852 caagtgtgagttatatatcctacatcggataaaataataaaggttgaacaccttataagtaa 7768913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 6334845 - 6334901
Alignment:
Q  225 attgtgcattcaatattctagaaattt-aaaatcttatcttttcaagacataattta 280  Q
    ||||||||||| ||||| ||||||||| |||||||||| |||| |||||| ||||||    
T  6334845 attgtgcattccatattttagaaatttaaaaatcttatatttttaagacaaaattta 6334901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 29549413 - 29549337
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| |||||||||||| ||| ||| |||| |  |||||||| |||||||  ||||||||||| ||| ||||||    
T  29549413 tgcaagtgtgagttatatgttccatatcagataaaatagtaaaggatgaacaccatataagtaagaagacccataaa 29549337  T

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Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 76)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 16037601 - 16037689
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgt 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||||||    
T  16037601 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttgtgatttaattccatttttagattcttaacttgt 16037689  T

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Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 16041157 - 16041245
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgt 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||    
T  16041157 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttatgatttaattccatttttagattcataacttgt 16041245  T

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Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 225 - 313
Target Start/End: Original strand, 16053097 - 16053185
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgt 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||    
T  16053097 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttatgatttaattccaattttagattcttaacttgt 16053185  T

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Target: chr3; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 225 - 316
Target Start/End: Complemental strand, 17517953 - 17517862
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtc 316  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||| || ||||| ||||||||||||||||    
T  17517953 attgtgcattcaatattctaaaaatttaaattcttatcttttcaagatataatttatgatttaatttcaattttagattcttaacttgtgtc 17517862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 11077012 - 11076923
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtg 314  Q
    |||||||| |||||||| ||||||||||||||||||| ||||||||||| |||||| | |||||||||||||||| ||||||||||||||    
T  11077012 attgtgcaatcaatattttagaaatttaaaatcttatattttcaagacaaaatttatgttttaattccatttttagattcttaacttgtg 11076923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 21832508 - 21832425
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||| ||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| ||||||||||    
T  21832508 tgttatgtgcaagtgtgagttatatgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggactcataaa 21832425  T

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Target: chr3; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 41242252 - 41242163
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtg 314  Q
    |||||||||| |||||| ||||||||| |||||||||||||||| ||||||||||| |||||||||| ||||||| ||| ||||||||||    
T  41242252 attgtgcatttaatattttagaaatttgaaatcttatcttttcaggacataatttatgatttaattctatttttagatttttaacttgtg 41242163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 503 - 588
Target Start/End: Complemental strand, 54017983 - 54017898
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  |||||||||||||||| |||||||||||| ||||||||||    
T  54017983 attgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaa 54017898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 7767476 - 7767396
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||    
T  7767476 tgtgtgtaagtctgagttatatgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaa 7767396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 505 - 589
Target Start/End: Original strand, 9240142 - 9240226
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||| | ||||||| |||||||||||| ||| |||||||    
T  9240142 tgttgtgtgcaagtgtgagttatatgttccacatcggatagagaagtaaaagctgaacaccttataagtaagaggacccataaat 9240226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 12114728 - 12114644
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| | |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||    
T  12114728 ttgttgtgtgcaagtgtaagttatatatcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaa 12114644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 225 - 314
Target Start/End: Original strand, 39933371 - 39933459
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtg 314  Q
    |||||||||||||||||||| ||||||||| | |||||||||||| ||| |||||| |||||||||| ||||||| ||||||||||||||    
T  39933371 attgtgcattcaatattctaaaaatttaaatt-ttatcttttcaaaacacaatttatgatttaattctatttttagattcttaacttgtg 39933459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 627
Target Start/End: Original strand, 15772846 - 15772970
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgc-ttaggg 602  Q
    |||| |||||||||| |||||||||||||||| |||||||| |  |||||| ||||||||| |||||||||||| ||| |||||| | ||||| ||| ||    
T  15772846 ttgtcgtgtgcaagtgtgagttatatgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaactcattgctttaagg 15772945  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    ||||| |||||| | ||||||||||    
T  15772946 ttttggataagagtgtggtgtctct 15772970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 37990805 - 37990681
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||| ||||| |||||||||||| |||||||||||| |  |||||| ||||||||| |||||||||||| |||||||||| | |||| |||| ||    
T  37990805 ttgttgtgtacaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggactcataaactcattgccttaagg 37990706  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  37990705 ttttgggtaagagtgtggtgtctct 37990681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 35946515 - 35946598
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||| ||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  35946515 tgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaa 35946598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 32463067 - 32462982
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagt-aaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||||||||||||||||||||  ||| |||||||||| || |||||||||||| ||||||||||    
T  32463067 ttgttgtgtacaagtgtgagttatatgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaa 32462982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 589
Target Start/End: Complemental strand, 42342554 - 42342469
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    ||||||||||||||| |||||||||||||||||||| |||| |  |||||||||| ||||| |||||||||||| ||| |||||||    
T  42342554 ttgttgtgtgcaagtgtgagttatatgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaat 42342469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 512 - 589
Target Start/End: Complemental strand, 50612610 - 50612533
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    ||||||| ||||||||||||||||||||||||| |  ||||||| |||||||| |||||||||||| |||||||||||    
T  50612610 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaat 50612533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 29645068 - 29644984
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| | ||||||||||||||||||||||| |  |||||||||| ||||| |||||||||||| ||| ||||||    
T  29645068 ttgttgtgtgcaagtgtaagttatatgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaa 29644984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 33175829 - 33175757
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||| ||||| ||||||||||||| |||||| |||||| ||||||||||||||||| ||||||||||||    
T  33175829 tgttgtgtacaagtgtgagttatatgtctcacatcagatagaaaagtaaaggttgaacaccttataagtaaga 33175757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 43346957 - 43346833
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||| ||||| |||||||||||||||||||| |||| |  |||||||||||||||| ||||||||||||  || |||||| | |||| |||| ||    
T  43346957 ttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgccttaagg 43346858  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  43346857 ttttgggtaagagtgtggtgtctct 43346833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 49336853 - 49336769
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||| ||||| ||||||||||||| ||||||||||||| ||| |||||||||||| ||| ||||||    
T  49336853 ttgttgtgtacaagtgtgagttacatgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaa 49336769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 504 - 587
Target Start/End: Original strand, 15773184 - 15773267
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataa 587  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |  |||||| ||||||||  |||||||||||| |||||||||    
T  15773184 ttgttgtgtgcaagtgtgagttatatgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggactcataa 15773267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 33803417 - 33803334
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||| | ||||||||||||||||||||||||| |  ||||||||||||||||  ||||||||||| ||| ||||||    
T  33803417 tgttgtgtgcaattgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaa 33803334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 504 - 598
Target Start/End: Complemental strand, 25739591 - 25739497
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgctt 598  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  |||||| ||||||||   ||||||||||| ||| |||||| | |||||||    
T  25739591 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaactcattgctt 25739497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 507 - 577
Target Start/End: Complemental strand, 29644744 - 29644674
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||| ||||||||||||||||||||||||  |  |||||||||||||||| ||||||||||||    
T  29644744 ttgtgtgcaagtgtgagttatatgtcccacatcggattaaagagtaaaggttgaacaccttataagtaaga 29644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 31190009 - 31190091
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcata 586  Q
    ||||||||||||||| ||||| ||||||||||||||||||| |  |||||||||||||||| |||||||| ||| ||| ||||    
T  31190009 ttgttgtgtgcaagtgtgagtgatatgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacccata 31190091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 508 - 588
Target Start/End: Complemental strand, 1634477 - 1634396
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagt-aaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||| ||||||||||||||||||||||||||| || | ||||||| ||||| |||||||||||| ||| ||||||    
T  1634477 tgtgtgcaagtgtgagttatatgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaa 1634396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 589
Target Start/End: Original strand, 25755386 - 25755471
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    ||||||||| ||||| ||||||||||||| |||||| |||| |  ||||||||||||| || |||||||||||| |||||||||||    
T  25755386 ttgttgtgtacaagtgtgagttatatgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaat 25755471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 45901705 - 45901790
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggat-agagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||||||||||||||||| | ||||  ||||||||||||| |||||||||||| ||| ||||||    
T  45901705 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagaaaaaaaggttgaacaccttataagtaagaggacgcataaa 45901790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 52634668 - 52634741
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||| ||||| ||||||||||||||||||||||||| |  |||||||||||||| | ||||||||||||    
T  52634668 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacgccttataagtaaga 52634741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 507 - 598
Target Start/End: Complemental strand, 39336392 - 39336301
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgctt 598  Q
    |||||||||||| ||||||||||||||||||||||||||| |  |  |||||||||||||||||||| ||| ||  |||||| | |||||||    
T  39336392 ttgtgtgcaagtgtgagttatatgtcccacatcggatagaaagttggaggttgaacactttataagtgagaggatccataaactcattgctt 39336301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 246 - 311
Target Start/End: Original strand, 28389449 - 28389514
Alignment:
Q  246 aaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaactt 311  Q
    ||||||||||| |||||||||||||| |||||||| |||||||||| ||||||| |||| ||||||    
T  28389449 aaatttaaaatattatcttttcaagatataatttatgatttaattctatttttagattcctaactt 28389514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 31229796 - 31229707
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtg 314  Q
    ||||| ||||| || || |||||||||||||||||||  |||||||| |||||||| | |||| ||| |||||||| |||||||||||||    
T  31229796 attgtacattctatgttttagaaatttaaaatcttatgatttcaagatataatttatgttttacttctatttttaacttcttaacttgtg 31229707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 32462725 - 32462600
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggat-agagaagtaaaggttgaacactttataagtaagatgactcataaatttattgc-ttagg 601  Q
    ||||||||| ||||| ||||||||||||||||||||| || | |||   ||||||||||||| |||||||||||||||  ||||||  |||||| ||| |    
T  32462725 ttgttgtgtacaagtgtgagttatatgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaagatgatccataaacctattgctttaag 32462626  T
Q  602 gttttgcataagaatatggtgtctct 627  Q
    |||||| |||||| | ||| ||||||    
T  32462625 gttttggataagagtgtggggtctct 32462600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 37991143 - 37991070
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||| ||||| ||||||||||||| ||||| ||||| |  |||||||||||||||| ||||||||||||    
T  37991143 ttgttgtgtacaagtgtgagttatatgtctcacattggataaaatagtaaaggttgaacaccttataagtaaga 37991070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 8327897 - 8327969
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||||| ||||||||||||||||||||||||| |  |||||||| |||| |  ||||||||||||    
T  8327897 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggatgaatatcttataagtaaga 8327969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 503 - 551
Target Start/End: Complemental strand, 12747919 - 12747871
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagt 551  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  12747919 attgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagt 12747871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 22304569 - 22304645
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| |||| |||||||||||||||||||| |  ||||||||||||| || |||||||||||| ||| ||||||    
T  22304569 tgcaagtgtgagctatatgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggacccataaa 22304645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 39914244 - 39914328
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||||||| |||||| |||| |  |||| ||||||||||| |||||| ||||| ||| ||||||    
T  39914244 ttgttgtgtgcaagtgtgagttatatgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaa 39914328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 43346642 - 43346702
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacac 564  Q
    ||||||||||||||| |||||| |||||||||||||||||| |  ||||||||||||||||    
T  43346642 ttgttgtgtgcaagtgtgagttgtatgtcccacatcggataaaatagtaaaggttgaacac 43346702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 54018364 - 54018280
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||| ||||||||| ||||||||||||||  ||||||||| |  ||||||| |||||||| |||||||||||| ||| ||||||    
T  54018364 ttgttatgtgcaagtgtgagttatatgtcctgcatcggataaaagagtaaagattgaacaccttataagtaagaggacccataaa 54018280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 577
Target Start/End: Complemental strand, 42584970 - 42584915
Alignment:
Q  522 agttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||||||||||||||||  ||||||| |||||||| ||||||||||||    
T  42584970 agttatatgtcccacatcggatagaagagtaaagattgaacaccttataagtaaga 42584915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 502 - 577
Target Start/End: Complemental strand, 45395821 - 45395746
Alignment:
Q  502 aattgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||||| | |||||||| |||||||||| ||| |  |||||||||| ||||| ||||||||||||    
T  45395821 aattgttgtgtgcaagtgtaagttatatatcccacatcgaataaaagagtaaaggttaaacacgttataagtaaga 45395746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 504 - 563
Target Start/End: Original strand, 53577356 - 53577415
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaaca 563  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||||    
T  53577356 ttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaacagtaaaggttgaaca 53577415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 225 - 343
Target Start/End: Complemental strand, 5050666 - 5050549
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||||||||||||||  || ||||||||||| || ||||||||| ||| || |||   ||||||||||||||||  || |||||||||| | | || ||    
T  5050666 attgtgcattcaatatattaaaaatttaaaattttgtcttttcaatacaaaagttacattttaattccatttttagttttttaacttgtgcctttag-gc 5050568  T
Q  325 acaagttaacattaccctt 343  Q
    |||||||||||| ||||||    
T  5050567 acaagttaacatgaccctt 5050549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 9821073 - 9821003
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatt 295  Q
    ||||||||||||| |||||  |||||| ||||||||||||||||| ||||||||||  ||| |||||||||    
T  9821073 attgtgcattcaagattctgaaaattttaaatcttatcttttcaaaacataatttataattcaattccatt 9821003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 225 - 341
Target Start/End: Original strand, 50129095 - 50129212
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaaga-cataatttaagatttaattccatttttaaattcttaacttgtgtcataagcg 323  Q
    ||||||||||||||||  || || ||| |||| |||||||||||| | || || |||   ||||||||||||||||  ||||||||||||| | |||| |    
T  50129095 attgtgcattcaatatattaaaagtttgaaattttatcttttcaataacaaaagttattttttaattccatttttagtttcttaacttgtgccctaaggg 50129194  T
Q  324 cacaagttaacattaccc 341  Q
    ||||||||||||| ||||    
T  50129195 cacaagttaacatgaccc 50129212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 504 - 573
Target Start/End: Complemental strand, 53118140 - 53118071
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    |||||||| |||||| |||||||||||| ||| |||||||| |  |||||||||||||||| ||||||||    
T  53118140 ttgttgtgggcaagtgtgagttatatgttccatatcggataaaagagtaaaggttgaacaccttataagt 53118071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 575
Target Start/End: Complemental strand, 3135237 - 3135168
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaa 575  Q
    ||||||||| |||||  |||||||||||||||||||||||| |  |||||| ||||||||| ||||||||||    
T  3135237 ttgttgtgtacaagt--gagttatatgtcccacatcggataaaatagtaaatgttgaacaccttataagtaa 3135168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 564
Target Start/End: Original strand, 22304246 - 22304298
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacac 564  Q
    ||||||| ||||||||||||||||||||||||| |  ||||||||||||||||    
T  22304246 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacac 22304298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 32589696 - 32589779
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||| |||||||||||||  |||| |  | |||||||||||||| |||||||||||| ||| ||||||    
T  32589696 ttgttgtgtgcaagtgtgagt-atatgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaa 32589779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 39389070 - 39389146
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| |||||||||||||| |||||||||| |  |||||||||||||||| ||| || ||||| ||| ||||||    
T  39389070 tgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaa 39389146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 577
Target Start/End: Complemental strand, 39935104 - 39935048
Alignment:
Q  521 gagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||| |||||||||| |  |||||||||||||||| ||||||||||||    
T  39935104 gagttatatgtcctacatcggataaaagagtaaaggttgaacaccttataagtaaga 39935048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 6276749 - 6276800
Alignment:
Q  239 attctagaaatttaaaatcttatcttttcaagacataatttaagatttaatt 290  Q
    ||||||||||||| ||||||||| ||||||||||||||||||  ||||||||    
T  6276749 attctagaaattttaaatcttatattttcaagacataatttataatttaatt 6276800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 502 - 577
Target Start/End: Complemental strand, 33809176 - 33809101
Alignment:
Q  502 aattgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||||| | |||||||||||||||||| |||||| || |  |  ||||||||||||| |||||||    
T  33809176 aattgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaattgcatattgaacactttatgagtaaga 33809101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 41359927 - 41359847
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||    ||||||||||||| |  ||||||||||||| || |||||||||||| ||| ||||||    
T  41359927 ttgttgtgtgcaagtgtgagttat----cccacatcggatacaatagtaaaggttgaataccttataagtaagaggacccataaa 41359847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 47964683 - 47964600
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| |||||| |||||||| ||||||||||| | ||  ||||||||| || ||||||| ||| ||| ||||||    
T  47964683 tgttgtgtgcaagtgtgagttgtatgtcccgcatcggatagaaatgtggaggttgaacgctatataagtgagaggacccataaa 47964600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 588
Target Start/End: Complemental strand, 47508248 - 47508174
Alignment:
Q  514 caagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||| ||||| |||||||  | ||||||| || ||||||| ||| |||||||||||||| ||||||||||||||    
T  47508248 caagtgtgagtaatatgtcttatatcggatggaaaagtaaatgttcaacactttataagtgagatgactcataaa 47508174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 508 - 577
Target Start/End: Original strand, 11661531 - 11661600
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||| ||||| ||||||||||||||||||||||||| |  ||||| |||| ||||  ||||||||||||    
T  11661531 tgtgtacaagtgtgagttatatgtcccacatcggataaaatagtaacggttaaacatcttataagtaaga 11661600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 520 - 573
Target Start/End: Complemental strand, 36986098 - 36986045
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    ||||||||||||||||||||| ||||| |||| ||||||||  |||||||||||    
T  36986098 tgagttatatgtcccacatcgaatagaaaagtgaaggttgagaactttataagt 36986045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 520 - 573
Target Start/End: Complemental strand, 37011537 - 37011484
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    ||||||||||||||||||||| ||||| |||| ||||||||  |||||||||||    
T  37011537 tgagttatatgtcccacatcgaatagaaaagtgaaggttgagaactttataagt 37011484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 577
Target Start/End: Original strand, 37726504 - 37726569
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||| ||||||||||||| ||||||||||| |  |||||| |||||| || ||||||||||||    
T  37726504 tgcaagtgtgagttatatgtctcacatcggataaaatagtaaatgttgaataccttataagtaaga 37726569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 4127410 - 4127358
Alignment:
Q  284 tttaattccatttttaaattcttaacttgtgtcataagcgcacaagttaacat 336  Q
    ||||||| ||||||||  |||||||||||||||||||| | ||||||||||||    
T  4127410 tttaattacatttttagtttcttaacttgtgtcataagggtacaagttaacat 4127358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 42342256 - 42342172
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||| | |||||| |||||||||||| |  |||||| ||| ||  | |||||||||||| ||||||||||    
T  42342256 ttgttgtgtgcaagtgtgattcatatgttccacatcggataaaagagtaaatgttcaatgccttataagtaagaggactcataaa 42342172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 573
Target Start/End: Complemental strand, 46546490 - 46546422
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    ||||||||| |||| |||||||||||||| |||| |||| || | ||  ||||||||||||||||||||    
T  46546490 tgttgtgtgtaagtgtgagttatatgtcctacattggattgaaatgtggaggttgaacactttataagt 46546422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 51886561 - 51886637
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||| ||||||| ||| |  |||||||||||||||   ||||||||||| ||| ||||||    
T  51886561 tgcaagtgtgagttatatgtctcacatcgaataaaatagtaaaggttgaacatcatataagtaagaggacccataaa 51886637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 509 - 588
Target Start/End: Complemental strand, 3384427 - 3384348
Alignment:
Q  509 gtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||  |||||||||||||||||||  |||| |  |||| ||||| ||||||||||||| |||| ||| ||||||    
T  3384427 gtgtgcaagcgtgagttatatgtcccacatatgataaaacagtataggttaaacactttataaggaagaggacccataaa 3384348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 587
Target Start/End: Complemental strand, 47965080 - 47964998
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataa 587  Q
    |||||||||||||| ||||||||||||   |||||||||||| ||||  ||||| |||| | ||||||| ||| | |||||||    
T  47965080 tgttgtgtgcaagtgtgagttatatgttttacatcggatagaaaagtggaggttaaacattatataagtgagagggctcataa 47964998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 569
Target Start/End: Complemental strand, 3135627 - 3135562
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttat 569  Q
    ||||||||| ||||| ||||||||||||||||| || |||| |  |||||| ||||||||| ||||    
T  3135627 ttgttgtgtacaagtgtgagttatatgtcccacctcagataaaagagtaaaagttgaacaccttat 3135562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 557
Target Start/End: Complemental strand, 22304114 - 22304061
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggt 557  Q
    ||||||||| ||||| |||||||||||||||||||| |||| |  |||||||||    
T  22304114 ttgttgtgtacaagtgtgagttatatgtcccacatcagataaaatagtaaaggt 22304061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 503 - 551
Target Start/End: Original strand, 2299967 - 2300015
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagt 551  Q
    |||||||||||||||| || |||||||||||||| || |||||| ||||    
T  2299967 attgttgtgtgcaagtgtgggttatatgtcccacgtcagatagaaaagt 2300015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 4823655 - 4823731
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||| ||| ||||||||||| |  |||||| ||| ||||| ||||||||| || ||| ||||||    
T  4823655 tgcaagtgtgagttataagtctcacatcggataaaatagtaaaagttaaacaccttataagtaggaggacccataaa 4823731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 11661943 - 11662027
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| || |||| ||||||| ||| ||||||| ||||| |  |||||||||||||||| ||| |||| ||| | ||||||||    
T  11661943 ttgttgtatgtaagtgtgagttaaatgccccacattggataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaa 11662027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 229 - 273
Target Start/End: Complemental strand, 37820856 - 37820812
Alignment:
Q  229 tgcattcaatattctagaaatttaaaatcttatcttttcaagaca 273  Q
    ||||||| || || |||||||||||||||||||||||| ||||||    
T  37820856 tgcattccatgttttagaaatttaaaatcttatctttttaagaca 37820812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 225 - 337
Target Start/End: Original strand, 50164027 - 50164139
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||||||||||  |||  | ||| ||||||  |||||||||||| |||  |||||   |||||||||| ||||| || |||| |||||| | |||| ||    
T  50164027 attgtgcattcataatttgaaaaacttaaaagtttatcttttcaatacaacatttattttttaattccacttttagatccttatcttgtgccctaagggc 50164126  T
Q  325 acaagttaacatt 337  Q
    |||||||||||||    
T  50164127 acaagttaacatt 50164139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 2e-29; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 5050460 - 5050570
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    |||||||||| |||||| |||||||||||||||||||||| |  || ||||||||| |||||||||| ||||||| |||||||||||||| |||||| ||    
T  5050460 attgtgcatttaatattttagaaatttaaaatcttatcttcttgaggcataatttatgatttaattctatttttagattcttaacttgtgccataagggc 5050559  T
Q  325 acaagttaaca 335  Q
    |||||||||||    
T  5050560 acaagttaaca 5050570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 225 - 304
Target Start/End: Complemental strand, 3067679 - 3067600
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattc 304  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||    
T  3067679 attgtgcattcaatattttagaaatttaaaatcttatcttttcaagaaataatttatgatttaatttcatttttagattc 3067600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 2740693 - 2740765
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||    
T  2740693 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaacagtaaaggttgaacaccttataagtaaga 2740765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 3244614 - 3244531
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||  |||||||||||| ||| ||||||    
T  3244614 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaa 3244531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 505 - 627
Target Start/End: Original strand, 36629230 - 36629353
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggt 603  Q
    |||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||| ||||| |||||||||||| ||| |||||| | |||| |||| |||    
T  36629230 tgttgtgttcaagtgtgagttatatgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggt 36629329  T
Q  604 tttgcataagaatatggtgtctct 627  Q
    ||||  ||||| | ||||||||||    
T  36629330 tttgggtaagagtgtggtgtctct 36629353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 505 - 580
Target Start/End: Original strand, 52884688 - 52884763
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatga 580  Q
    |||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||||    
T  52884688 tgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatga 52884763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 225 - 341
Target Start/End: Original strand, 45891830 - 45891947
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaa-gacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcg 323  Q
    |||||||||||||| | ||| |||||||||||||||| ||||||| |||| || ||| |||||||||| ||||||| |||||||||||||| | | || |    
T  45891830 attgtgcattcaatgtcctaaaaatttaaaatcttattttttcaaagacaaaaattatgatttaattctatttttagattcttaacttgtgcccttaggg 45891929  T
Q  324 cacaagttaacattaccc 341  Q
    |||||||||||| |||||    
T  45891930 cacaagttaacactaccc 45891947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 52884879 - 52884952
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  52884879 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaaga 52884952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 505 - 586
Target Start/End: Complemental strand, 54741341 - 54741260
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcata 586  Q
    |||||||||||||| ||| ||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||    
T  54741341 tgttgtgtgcaagtgtgaattatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccata 54741260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 22028125 - 22028001
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||||||||| ||| ||||||||||||||||||||| |  |  ||||||||||||| |||||||||||| ||| ||||||  ||||| |||| ||    
T  22028125 ttgttgtgtgcaagtgtgacttatatgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggacccataaacatattgccttaagg 22028026  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||||| ||||||||||    
T  22028025 ttttgggtaagaatgtggtgtctct 22028001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 34646813 - 34646689
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||| ||||| ||||||||||||||||||||||||| |  |||||| ||||||||| |||||| ||||| |||||||||| | |||| |||| ||    
T  34646813 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaagg 34646714  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  34646713 ttttgggtaagagtgtggtgtctct 34646689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 627
Target Start/End: Original strand, 50002418 - 50002542
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||| ||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||||| ||||||||| ||| |||||||  |||| |||| ||    
T  50002418 ttgttgtttgcaagtgtgagttatatgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattgtcttaagg 50002517  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  50002518 ttttgggtaagagtgtggtgtctct 50002542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 504 - 587
Target Start/End: Original strand, 3341120 - 3341203
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataa 587  Q
    ||||||||||||||| ||||||||||||||||||| ||||| |  |||||||||| |||||||||||||||||| ||| |||||    
T  3341120 ttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggacccataa 3341203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 16888981 - 16888907
Alignment:
Q  504 ttgttgtgtg-caagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||    
T  16888981 ttgttgtgtggcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaataccttataagtaaga 16888907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 506 - 588
Target Start/End: Original strand, 44620654 - 44620736
Alignment:
Q  506 gttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||| ||||||||||||||||||||||||  |  |||| |||||||||||||||||||||||| ||| ||||||    
T  44620654 gttgtgtgcaagtgtgagttatatgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggacccataaa 44620736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 10245912 - 10245985
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||||||| ||||||||||||| |  |||||||||||||||| ||||||||||||    
T  10245912 ttgttgtgtgcaagtgtgagttatatgccccacatcggataaaagagtaaaggttgaacaccttataagtaaga 10245985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 505 - 598
Target Start/End: Original strand, 28034222 - 28034315
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgctt 598  Q
    |||||||||||||| ||| ||||||||||| ||||||||||| ||||  |||||||||||||||||||| |||  || |||||| |||||||||    
T  28034222 tgttgtgtgcaagtgtgaattatatgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaacccataaacttattgctt 28034315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 4955481 - 4955397
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||||||| || |||||||| |  ||| |||||||||||| |||||||||||| ||||||||||    
T  4955481 ttgttgtgtgcaagtgtgagttatatgtctcatatcggataaaatagttaaggttgaacaccttataagtaagaggactcataaa 4955397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 627
Target Start/End: Original strand, 36572011 - 36572135
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||| ||||| ||||||||||||||||||||| ||| |  |||||| ||||||||| |||||||||||| ||| |||||||  |||| |||| ||    
T  36572011 ttgttgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgccttaagg 36572110  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  | ||| ||||||||||||    
T  36572111 ttttgggttagagtatggtgtctct 36572135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 505 - 587
Target Start/End: Original strand, 2741064 - 2741146
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataa 587  Q
    |||| ||||||||| |||||||||||||||||||| ||||||  ||||||||||||| || |||||||||||| ||| |||||    
T  2741064 tgttatgtgcaagtgtgagttatatgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggacccataa 2741146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 503 - 585
Target Start/End: Original strand, 3700356 - 3700438
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcat 585  Q
    |||||||||||||||| |||||||||||||| |||||||||| |  |||||| ||||||||| |||||||||| | |||||||    
T  3700356 attgttgtgtgcaagtgtgagttatatgtcctacatcggataaaagagtaaatgttgaacaccttataagtaaaaggactcat 3700438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 16889701 - 16889616
Alignment:
Q  504 ttgttgtgtg-caagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||| ||||| ||||||||||||| || |||||||||| |||||||||||||| || |||||||||||| || |||||||    
T  16889701 ttgttgtgtggcaagtgtgagttatatgtctcaaatcggatagaaaagtaaaggttgaataccttataagtaagaggattcataaa 16889616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 25483328 - 25483401
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||||  ||||||||||||    
T  25483328 ttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacatcttataagtaaga 25483401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 507 - 588
Target Start/End: Original strand, 39404013 - 39404094
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| ||||| |||||||||||||| |||| | ||| |  ||||||||||||||||||||||||||||| ||||||||||    
T  39404013 ttgtgtacaagtgtgagttatatgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaa 39404094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 44620288 - 44620361
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||| ||| ||||||||||||||||||||| ||||| |  |||||||||||||||| ||||||||||||    
T  44620288 ttgttgtgtacaaatatgagttatatgtcccacatgggataaaatagtaaaggttgaacaccttataagtaaga 44620361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 49076612 - 49076539
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| |||||||||||| ||| |||||||| |  |||||||||||||||| ||||||||||||    
T  49076612 ttgttgtgtgcaagtgtgagttatatgtaccatatcggataaaacagtaaaggttgaacaccttataagtaaga 49076539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 22183428 - 22183344
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| |||||||||| |||||||||||||| |  |||||| |||||||| ||||||||||| | ||| ||||||    
T  22183428 ttgttgtgtgcaagtgtgagttatatatcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaa 22183344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 36608825 - 36608701
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||||||||| |||||||||||||| |||||||||| |  |||||| ||||||||| | |||||||||| ||  |||||||  |||| |||| ||    
T  36608825 ttgttgtgtgcaagtgtgagttatatgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccattgtcttaagg 36608726  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  36608725 ttttgggtaagagtgtggtgtctct 36608701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 39404390 - 39404474
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||||||||||||| |||| |  ||||||||| |||||| |||||||||||| ||| ||||||    
T  39404390 ttgttgtgtacaagtgtgagttatatgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaa 39404474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 39793023 - 39792951
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||| ||||| |||||||||||||||||||| |||||| ||||||| ||||||||| ||||||| ||||    
T  39793023 tgttgtgtacaagtgtgagttatatgtcccacatcagatagaaaagtaaatgttgaacaccttataagaaaga 39792951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 575
Target Start/End: Complemental strand, 41707629 - 41707557
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaa 575  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |  ||||||||||||||||  |||||||||    
T  41707629 attgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccatataagtaa 41707557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 43968042 - 43967987
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataattta 280  Q
    |||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||    
T  43968042 attgtgcatttaatattctaaaaattttaaatcttatcttttcaagacataattta 43967987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 4390265 - 4390192
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||| || ||||||||| |||| |  |||||||||||||||| ||||||||||||    
T  4390265 ttgttgtgtgcaagtgtgagttacatatcccacatcagataaaagagtaaaggttgaacaccttataagtaaga 4390192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 1731811 - 1731727
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||| | |||||||||||||||||||| |||| |  |||||||||||||||  |||||| ||||| ||| ||||||    
T  1731811 ttgttgtgtgcaaatgtgagttatatgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaa 1731727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 49880160 - 49880236
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||| | ||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  49880160 tgcaagtgtgagttatatgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 49880236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 520 - 588
Target Start/End: Complemental strand, 50630903 - 50630835
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| |||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  50630903 tgagttatatgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaa 50630835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 54108908 - 54108989
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| | ||||||  ||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  54108908 tgttgtgtgcaagtgtcagttat--gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 54108989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 55933280 - 55933204
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| |||||||||||||| |||||||||| |  ||||| |||||||||| |||||||||||| ||| ||||||    
T  55933280 tgcaagtgtgagttatatgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaa 55933204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 32941286 - 32941203
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| ||||||| |||||||||||||  |||||||| |||  |||||||||||||||| |||||| ||||| | ||||||||    
T  32941286 tgttgtctgcaagtgtgagttatatgtcttacatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaa 32941203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 577
Target Start/End: Original strand, 44621420 - 44621491
Alignment:
Q  506 gttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||| |||||||||||||| |||| ||||| |  |||||||||| ||||| ||||||||||||    
T  44621420 gttgtgtgcaagtgtgagttatatgtccaacatgggataaaacagtaaaggttaaacaccttataagtaaga 44621491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 509 - 588
Target Start/End: Complemental strand, 54017754 - 54017675
Alignment:
Q  509 gtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||| ||||||||||||||||| || |||| |  |||||||||||||||  |||||||||||| ||| ||||||    
T  54017754 gtgtgcaagtgtgagttatatgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaa 54017675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 522 - 577
Target Start/End: Complemental strand, 54343147 - 54343092
Alignment:
Q  522 agttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  54343147 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaaga 54343092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 588
Target Start/End: Original strand, 3340802 - 3340883
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||| ||||||||||||||| |||| |||  |  |||||||||||| ||| |||||||||||| ||| ||||||    
T  3340802 ttgtgtgcaagtgtgagttatatgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaa 3340883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 20826225 - 20826282
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||||||||||||| |  |||||| ||||||||| ||||||||||||    
T  20826225 tgagttatatgtcccacatcggataaaatagtaaaagttgaacacgttataagtaaga 20826282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 43174498 - 43174583
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagaga-agtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||| | |||||| |||| | | |||||||||||||||| |||||||||||| ||| ||||||    
T  43174498 ttgttgtgtacaagtgtgagttatatgccacacatcagataaaaagagtaaaggttgaacaccttataagtaagaggacacataaa 43174583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 45489495 - 45489422
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||| ||||| ||| ||||||||| ||||||||||| |  ||||||||||||||||  |||||||||||    
T  45489495 ttgttgtgtacaagtgtgaattatatgtctcacatcggataaaagagtaaaggttgaacaccatataagtaaga 45489422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 588
Target Start/End: Original strand, 50459724 - 50459797
Alignment:
Q  515 aagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||| |||||||||||| ||||||||| || |  |||||||||||||||  |||||||||||| ||||||||||    
T  50459724 aagtgtgagttatatgttccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaa 50459797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 504 - 586
Target Start/End: Complemental strand, 54017868 - 54017784
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgt--cccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcata 586  Q
    ||||||||||||| | |||||||||| |  ||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||    
T  54017868 ttgttgtgtgcaaatgtgagttatatatatcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccata 54017784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 572
Target Start/End: Original strand, 12197370 - 12197438
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataag 572  Q
    ||||||||||||||| ||||||||| ||||||||||  ||||| |||| |||||| || ||||||||||    
T  12197370 ttgttgtgtgcaagtgtgagttataggtcccacatcaaatagaaaagtgaaggttcaatactttataag 12197438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 564
Target Start/End: Original strand, 19504697 - 19504757
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacac 564  Q
    ||||||||| |||||||||||||||||||||| |||||||| |  |||||| |||||||||    
T  19504697 ttgttgtgtacaagtatgagttatatgtcccatatcggataaaatagtaaaagttgaacac 19504757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 20825829 - 20825901
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||| ||| | |||||||||||| |||||||||||| |  |||||||||||||||| |||||| |||||    
T  20825829 tgttgtgtacaaatgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataaataaga 20825901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 41370357 - 41370433
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| |||||||||||||||| |||||||| |  |||||| |||||| || |||||||||||| ||| ||||||    
T  41370357 tgcaagtgtgagttatatgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaa 41370433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 51768224 - 51768140
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||| | |||||||||||||| | |||| ||| |  |||||| ||||||||| |||||| ||||| ||||||||||    
T  51768224 ttgttgtgtgcaaatgtgagttatatgtcctatatcgaatataagagtaaatgttgaacaccttataaataagaggactcataaa 51768140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 606
Target Start/End: Complemental strand, 34004744 - 34004646
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgcttagggtttt 606  Q
    |||||||||||| ||||||||||||| |||||  |||| | || |||||||||||||  |||||||||||| ||| |||||| | ||| |||| ||||||    
T  34004744 ttgtgtgcaagtgtgagttatatgtcacacatatgataaa-aactaaaggttgaacaacttataagtaagaggacccataaactcattccttaaggtttt 34004646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 243 - 314
Target Start/End: Original strand, 47365914 - 47365985
Alignment:
Q  243 tagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtg 314  Q
    ||||||||| ||||||||| ||||||||||  |||||| | ||| |||| |||||||| |||||||||||||    
T  47365914 tagaaattttaaatcttatattttcaagaccaaatttatgctttgattctatttttaacttcttaacttgtg 47365985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 225 - 311
Target Start/End: Original strand, 18371175 - 18371261
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaactt 311  Q
    ||||||||||| ||||| ||||| ||||||||||||| |||| |||| | ||||||   ||||||||| ||||||  ||||||||||    
T  18371175 attgtgcattctatattttagaactttaaaatcttatatttttaagataaaatttatattttaattccttttttacgttcttaactt 18371261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 290
Target Start/End: Complemental strand, 4059171 - 4059118
Alignment:
Q  237 atattctagaaatttaaaatcttatcttttcaagacataatttaagatttaatt 290  Q
    ||||| |||||||||||||| |||||||||||||||| |||||| | |||||||    
T  4059171 atattttagaaatttaaaattttatcttttcaagacaaaatttatgttttaatt 4059118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 520 - 589
Target Start/End: Complemental strand, 6975604 - 6975535
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    ||||||||||||| |||||| |||| |  ||||||||||||| |  |||||||||||| |||||||||||    
T  6975604 tgagttatatgtctcacatccgataaaatagtaaaggttgaatatcttataagtaagaggactcataaat 6975535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 527 - 627
Target Start/End: Original strand, 45496820 - 45496921
Alignment:
Q  527 tatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcataagaatatggtgtct 625  Q
    |||||||||||||||||| |   ||||||||||||||| |||||||||||| |||  ||||| | |||| |||| |||||||  ||||| | ||||||||    
T  45496820 tatgtcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtct 45496919  T
Q  626 ct 627  Q
    ||    
T  45496920 ct 45496921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 565
Target Start/End: Complemental strand, 50788139 - 50788086
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacact 565  Q
    ||||||| | ||||||||||||||||||||||| |  |||||||||||||||||    
T  50788139 tgcaagtgtaagttatatgtcccacatcggataaaatagtaaaggttgaacact 50788086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 52803305 - 52803228
Alignment:
Q  237 atattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtg 314  Q
    ||||| |||||||||||||||||||| ||| |||| | |||||| | |||||||  |||||||| || ||||||||||    
T  52803305 atattttagaaatttaaaatcttatccttttaagataaaatttatgttttaattttatttttaatttattaacttgtg 52803228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 520 - 588
Target Start/End: Original strand, 760197 - 760265
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||||||||| ||||| || | ||||||||  ||||||||||| ||| ||| ||||||    
T  760197 tgagttatatgtcccacatcgaatagaaaaatgaaggttgagaactttataagtgagaggacccataaa 760265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 577
Target Start/End: Original strand, 44620362 - 44620418
Alignment:
Q  521 gagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||| |||||||||||| |  |||||||||||||||| |||||| |||||    
T  44620362 gagttatatgttccacatcggataaaacagtaaaggttgaacaccttataaataaga 44620418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 521 - 577
Target Start/End: Original strand, 44621011 - 44621067
Alignment:
Q  521 gagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||| |||| ||||||||||||| |  |||||||||||||||| ||||||||||||    
T  44621011 gagttgtatgacccacatcggataaaacagtaaaggttgaacaccttataagtaaga 44621067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 10246340 - 10246423
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| |  |||||||||| || |||||||| |  |||||||||||||||  |||||||| ||| ||| ||||||    
T  10246340 tgttgtgtgcaagtgtctgttatatgtctcaaatcggataaaagagtaaaggttgaacatcttataagttagaggacccataaa 10246423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 22028535 - 22028449
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggat--agagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| | | |||||||||| |||||||||  | | || |||||||||||||| |||| ||||||| ||| ||||||    
T  22028535 ttgttgtgtgcaagtgttacttatatgtcctacatcggataaaaaaaaataaaggttgaacaccttattagtaagaggacccataaa 22028449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 343
Target Start/End: Original strand, 37861227 - 37861345
Alignment:
Q  225 attgtgcattcaatattctagaaa-tttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcg 323  Q
    |||||||||||||| | || |||| |||||||  |||| ||||||| ||| || ||| | ||||||||  |||||| || ||||||||||| | |||| |    
T  37861227 attgtgcattcaatgt-cttgaaagtttaaaaagttattttttcaatacaaaacttatgttttaattctttttttagatccttaacttgtgccttaaggg 37861325  T
Q  324 cacaagttaacattaccctt 343  Q
    ||||||||||||| ||||||    
T  37861326 cacaagttaacatgaccctt 37861345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 14295071 - 14295165
Alignment:
Q  237 atattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgcacaagtt 331  Q
    ||||| || |||||| |||||||||||||| |||||| |||||| | |||||||   ||||||  ||||||||||| ||| |||  |||||||||    
T  14295071 atattttaaaaatttcaaatcttatctttttaagacaaaatttatgttttaattttgtttttagcttcttaacttgagtcttaaatgcacaagtt 14295165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 14311120 - 14311214
Alignment:
Q  237 atattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgcacaagtt 331  Q
    ||||| || |||||| |||||||||||||| |||||| |||||| | |||||||   ||||||  ||||||||||| ||| |||  |||||||||    
T  14311120 atattttaaaaatttcaaatcttatctttttaagacaaaatttatgttttaattttgtttttagcttcttaacttgagtcttaaatgcacaagtt 14311214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 237 - 331
Target Start/End: Original strand, 14313321 - 14313415
Alignment:
Q  237 atattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgcacaagtt 331  Q
    ||||| || |||||| |||||||||||||| |||||| |||||| | |||||||   ||||||  ||||||||||| ||| |||  |||||||||    
T  14313321 atattttaaaaatttcaaatcttatctttttaagacaaaatttatgttttaattttgtttttagcttcttaacttgagtcttaaatgcacaagtt 14313415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 44620936 - 44621010
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtccca-catcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||  ||||| ||||||| |||||||| ||||||||| |   ||||||||||||||| ||||||||||||    
T  44620936 ttgttgtggacaagtgtgagttagatgtcccaacatcggataaaactgtaaaggttgaacaccttataagtaaga 44621010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 573
Target Start/End: Complemental strand, 11348492 - 11348423
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    ||||||||||||| | |||||||||||| | ||||| |||| |  |||  ||||||||||||||||||||    
T  11348492 ttgttgtgtgcaattgtgagttatatgttctacatcagataaaatagtggaggttgaacactttataagt 11348423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 553
Target Start/End: Complemental strand, 11706685 - 11706636
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaa 553  Q
    ||||||||||||||  |||||| |||||||||||||||||| | ||||||    
T  11706685 ttgttgtgtgcaagggtgagttgtatgtcccacatcggataaaaaagtaa 11706636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 45050592 - 45050649
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttga 560  Q
    |||||||||||||||| ||||||||||||| ||||||  ||| |  ||||||||||||    
T  45050592 attgttgtgtgcaagtgtgagttatatgtctcacatcaaataaaagagtaaaggttga 45050649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 563
Target Start/End: Original strand, 49302902 - 49302955
Alignment:
Q  510 tgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaaca 563  Q
    |||| |||| ||||||||||||||||||||  ||| | ||||||||||||||||    
T  49302902 tgtgtaagtgtgagttatatgtcccacatcaaataaaaaagtaaaggttgaaca 49302955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 39 - 75
Target Start/End: Original strand, 2474257 - 2474293
Alignment:
Q  39 tattctttgtctttagccaccaataagaaagacgttt 75  Q
    ||||||||||||||  |||||||||||||||||||||    
T  2474257 tattctttgtctttttccaccaataagaaagacgttt 2474293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 570
Target Start/End: Complemental strand, 49076992 - 49076928
Alignment:
Q  506 gttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttata 570  Q
    ||||||||||||| |||||||||||| ||| || || || |  |||||||||||||||| |||||    
T  49076992 gttgtgtgcaagtgtgagttatatgttccatattggctaaaatagtaaaggttgaacaccttata 49076928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 3e-28; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 39066366 - 39066242
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||||||||| |||||||||| | |||||||||||||| ||||||||||||||||| |||||| ||||||||| |||||| | |||| |||| ||    
T  39066366 ttgttgtgtgcaagtgtgagttatatattccacatcggatagaaaagtaaaggttgaacaccttataactaagatgacccataaaatcattgtcttaagg 39066267  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    ||||| |||||| | ||||||||||    
T  39066266 ttttggataagagtgtggtgtctct 39066242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 22077660 - 22077577
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||    
T  22077660 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaa 22077577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 505 - 627
Target Start/End: Complemental strand, 24600479 - 24600356
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggt 603  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||  ||||||||||||  ||||||||| | |||| |||| |||    
T  24600479 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaactcattgtcttaaggt 24600380  T
Q  604 tttgcataagaatatggtgtctct 627  Q
    ||||  ||||| | ||||||||||    
T  24600379 tttgtgtaagagtgtggtgtctct 24600356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 17294569 - 17294653
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||    
T  17294569 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaa 17294653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 41184591 - 41184507
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||    
T  41184591 ttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaa 41184507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 19339949 - 19340057
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||||| ||| |  | ||||||||||||| || |||||||||||||| ||| || ||    
T  19339949 attgtgcattcaatattttagaactttaaagtcttatcttttcaagacaaaatct--gttttaattccatttatagattcttaacttgtgacattagggc 19340046  T
Q  325 acaagttaaca 335  Q
    |||||||||||    
T  19340047 acaagttaaca 19340057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 66638 - 66565
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| |||||||||||| ||| |||||||||| ||||||||||||||||| ||||||||||||    
T  66638 ttgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtaaaggttgaacaccttataagtaaga 66565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 225 - 314
Target Start/End: Complemental strand, 31501127 - 31501038
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtg 314  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| ||| || ||| ||||||||| |||||||| |||||||| |||||    
T  31501127 attgtgcatttaatgttctagaaatttaaaatcttatcttttcaaaacaaaaattatgatttaatttcatttttagattcttaatttgtg 31501038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 34364499 - 34364572
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||||| ||||||||||||    
T  34364499 ttgttgtgtgcaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacaccttataagtaaga 34364572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 503 - 588
Target Start/End: Original strand, 41157366 - 41157451
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||||| |||||||||||||||||||| |||| |  |||||| ||||||||| |||||||||||| ||| ||||||    
T  41157366 attgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggacccataaa 41157451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 232 - 309
Target Start/End: Original strand, 46298582 - 46298659
Alignment:
Q  232 attcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaac 309  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||| | |||||||| ||||||| |||||||||    
T  46298582 attcaatattatagaaatttaaaatcttatcttttcaagacaacatttatgttttaattctatttttagattcttaac 46298659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 3537305 - 3537229
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  3537305 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 3537229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 3875497 - 3875413
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||  | ||||||||||| ||||||||||| | |||||||||||| |||| |||||||||||| ||||||||||    
T  3875497 ttgttgtgtgcaagagtcagttatatgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaa 3875413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 5320131 - 5320047
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||| |||||||||||| |||||||||||||| ||||||| ||||||||| |||||||| ||| ||| ||||||    
T  5320131 ttgttgtatgcaagtgtgagttatatgttccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaa 5320047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 26661688 - 26661564
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||| ||||| |||||||||||||||||||||| || |  |||||||||||||||| |||||||| ||| ||| |||||| | |||| |||| ||    
T  26661688 ttgttgtgtacaagtgtgagttatatgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaagg 26661589  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  26661588 ttttgggtaagagtgtggtgtctct 26661564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 29798191 - 29798275
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||| |||||||||||||| |||| ||||| |  |||||||||||||||| |||||||||||| ||||||||||    
T  29798191 ttgttgtatgcaagtgtgagttatatgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaa 29798275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 34364917 - 34365001
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |  | |||||||||||||| |||||||||||| ||| ||||||    
T  34364917 ttgttgtgtgcaagtgtgagttatatgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggacccataaa 34365001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 596
Target Start/End: Original strand, 40082399 - 40082490
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgc 596  Q
    |||||||| |||||| |||||||||||||| |||||||||| |  |||||||||||||||| |||||||||||| || ||||||||| |||||    
T  40082399 ttgttgtgcgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagga-tcataaattcattgc 40082490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 41142364 - 41142448
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||| ||||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||| | ||| ||||||    
T  41142364 ttgttctgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaa 41142448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 627
Target Start/End: Original strand, 41156983 - 41157107
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgc-ttaggg 602  Q
    ||||||||||||||| ||| |||||||||||| | |||||| |  |||||||||||||||| |||||||||||| ||| |||||| | ||||| ||| ||    
T  41156983 ttgttgtgtgcaagtgtgaattatatgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgctttaagg 41157082  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  41157083 ttttgggtaagagtgtggtgtctct 41157107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 44290983 - 44290907
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  44290983 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 44290907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 513 - 588
Target Start/End: Original strand, 3550721 - 3550796
Alignment:
Q  513 gcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| |||||||||||||||||||| |||| |  |||||||||||||||| |||||||||||| ||||||||||    
T  3550721 gcaagtgtgagttatatgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaa 3550796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 502 - 573
Target Start/End: Original strand, 22793268 - 22793339
Alignment:
Q  502 aattgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    |||||||||| |||||| ||||||||||||||||||||| ||||| ||||| |||||||| |||||||||||    
T  22793268 aattgttgtgagcaagtgtgagttatatgtcccacatcgtatagaaaagtagaggttgaaaactttataagt 22793339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 508 - 587
Target Start/End: Original strand, 45084378 - 45084457
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataa 587  Q
    ||||||||||| |||||||||| |||||||||||||| |  |||||||||||||||| |||||||||||| ||| |||||    
T  45084378 tgtgtgcaagtgtgagttatatctcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataa 45084457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 225 - 311
Target Start/End: Complemental strand, 25808557 - 25808471
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaactt 311  Q
    |||||| |||||||||| || ||||||||||| ||||||||| ||||||  ||||| |||||||||||||||||| || ||||||||    
T  25808557 attgtgtattcaatattttaaaaatttaaaattttatcttttgaagacaacatttatgatttaattccatttttagatccttaactt 25808471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 512 - 625
Target Start/End: Complemental strand, 44290616 - 44290502
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcat 610  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||  |||||||||||| ||| ||||||   |||| |||| |||||||  |    
T  44290616 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggt 44290517  T
Q  611 aagaatatggtgtct 625  Q
    |||| ||||||||||    
T  44290516 aagagtatggtgtct 44290502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 505 - 598
Target Start/End: Complemental strand, 1188753 - 1188660
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgctt 598  Q
    |||||||||||||| |||||||||||| ||| |||||||||| ||||  |||||||| | ||||||||| ||| |||||||||| | |||||||    
T  1188753 tgttgtgtgcaagtgtgagttatatgttccatatcggatagaaaagtggaggttgaatattttataagtgagaagactcataaactcattgctt 1188660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 31767327 - 31767254
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| || ||||||||| |||||||||||| |  |||||||||||||||| ||||||||||||    
T  31767327 ttgttgtgtgcaagtgtgggttatatgttccacatcggataaaacagtaaaggttgaacaccttataagtaaga 31767254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 37850766 - 37850693
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||||||||||||||||| ||| |  |||| ||||||||||| ||||||||||||    
T  37850766 ttgttgtgtgcaagtgtgagttatatgtcccacatcgcataaaacagtagaggttgaacaccttataagtaaga 37850693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 44685449 - 44685522
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaagg-ttgaacactttataagtaaga 577  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||||||| ||||| || ||||||||||||    
T  44685449 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaagtaaaggtttgaaaaccttataagtaaga 44685522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 627
Target Start/End: Original strand, 45839619 - 45839747
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggtt-----gaacactttataagtaagatgactcataaatttattg-ct 597  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || ||||||||     |||||| |||||||||||| ||| ||||||| || || ||    
T  45839619 ttgttgtgtacaagtatgagttatatgtcccacatcggataga-aaataaaggttgaatcgaacaccttataagtaagaagacccataaatgtaatgcct 45839717  T
Q  598 tagggttttgcataagaatatggtgtctct 627  Q
    || |||||||  ||||| | ||||||||||    
T  45839718 taaggttttgggtaagattgtggtgtctct 45839747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 520 - 627
Target Start/End: Original strand, 14318875 - 14318983
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcataagaatat 618  Q
    |||||||||||| |||| ||||||| |  |||||||||||||||| |||||||||||| ||| ||||||| ||||| |||| |||||||  ||||| | |    
T  14318875 tgagttatatgttccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgt 14318974  T
Q  619 ggtgtctct 627  Q
    |||||||||    
T  14318975 ggtgtctct 14318983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 21378207 - 21378123
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| | |||||||||||||| ||||||||||  ||||||||||||| |  |||||||||||| ||| ||||||    
T  21378207 ttgttgtgtgcaagtgtcagttatatgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacccataaa 21378123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 627
Target Start/End: Complemental strand, 32594874 - 32594758
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcat 610  Q
    ||||||| |||||||||||||| ||||| |||| |  |||||||||||||||| |||||||||||| ||| |||||| | |||| |||| |||||||  |    
T  32594874 tgcaagtgtgagttatatgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggt 32594775  T
Q  611 aagaatatggtgtctct 627  Q
    |||| | ||||||||||    
T  32594774 aagagtgtggtgtctct 32594758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 627
Target Start/End: Original strand, 41759483 - 41759599
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcat 610  Q
    ||||||| ||||||||||||| ||||||||||| |  |||||| ||||||||| |||||||||||||||  |||||||  |||| |||| |||||||  |    
T  41759483 tgcaagtgtgagttatatgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaaggttttgggt 41759582  T
Q  611 aagaatatggtgtctct 627  Q
    |||| | ||||||||||    
T  41759583 aagagtgtggtgtctct 41759599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 576
Target Start/End: Complemental strand, 24132150 - 24132079
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaag 576  Q
    |||||| ||||| | ||||||||||||||| ||||||||||| ||||||||||||||||| |||||| ||||    
T  24132150 tgttgtatgcaactgtgagttatatgtccctcatcggatagaaaagtaaaggttgaacaccttataaataag 24132079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 37556103 - 37556177
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagaga-agtaaaggttgaacactttataagtaaga 577  Q
    ||||||||| ||||| ||||||||||||||||||||||||| | | |||||||||||||||  ||||||||||||    
T  37556103 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaaga 37556177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 505 - 571
Target Start/End: Complemental strand, 50469246 - 50469180
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataa 571  Q
    |||||||||||||| |||||||||||||| ||||| ||||   ||||||||||||||||||||||||    
T  50469246 tgttgtgtgcaagtgtgagttatatgtcctacatcagataataaagtaaaggttgaacactttataa 50469180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 66254 - 66169
Alignment:
Q  505 tgttgtgtgcaagtatgagttat-atgtcccacatcggatagagaagtaaagg-ttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| ||||| || ||||| ||||||||||||| ||||||||| |||||||| |||||||||||| ||| ||||||    
T  66254 tgttgtgtgcaagtgtgagtaatcatgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagaggacccataaa 66169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 573
Target Start/End: Original strand, 34649430 - 34649499
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    ||||||| | ||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||||||||    
T  34649430 ttgttgtatacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagt 34649499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 515 - 588
Target Start/End: Complemental strand, 50052178 - 50052105
Alignment:
Q  515 aagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||| ||||||||||||||||||||||||| |  |||||||||||||||  |||||||||||| ||| ||||||    
T  50052178 aagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaa 50052105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 508 - 588
Target Start/End: Original strand, 11977276 - 11977356
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||| ||||| |||||||||||||||||||||| || |  |||||| ||||||||| ||||||||||||  |||||||||    
T  11977276 tgtgtacaagtgtgagttatatgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcactcataaa 11977356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 596
Target Start/End: Complemental strand, 48588646 - 48588562
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgc 596  Q
    ||||||| |||||| ||||||| |||||||||| |  |||||||||||||||| |||||||||||| ||| | |||||| |||||    
T  48588646 tgcaagtgtgagttctatgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccgtaaattcattgc 48588562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 503 - 577
Target Start/End: Original strand, 5575097 - 5575169
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||| ||  || ||||||||||||| |||||||||  |||||||||||||||| ||||||||||||    
T  5575097 attgttgtgtgcatgt--gaattatatgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaaga 5575169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 19283620 - 19283537
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||  ||||||| |||||| ||| | ||| ||| ||||||    
T  19283620 tgttgtgtgcaagtgtgagttatatgtcccacaccggatagaaaagtggaggttgagcactttgtaaatgagaggacacataaa 19283537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 9955899 - 9955973
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaa-gtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||  ||| |||||||||||||||||||| |||| | || ||||||||||||||| ||||||||||||    
T  9955899 ttgttgtgtgttagtgtgagttatatgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaaga 9955973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 577
Target Start/End: Complemental strand, 38804522 - 38804448
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||| | ||||| ||||||||| ||||||||||| ||| |  |||||||||||||||| ||||||||||||    
T  38804522 attgttgtttacaagtgtgagttatacgtcccacatcgaataaaagagtaaaggttgaacacattataagtaaga 38804448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 546
Target Start/End: Complemental strand, 22077287 - 22077246
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggataga 546  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  22077287 tgttgtgtgcaagtgtgagttatatgtcccacatcggataga 22077246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 588
Target Start/End: Complemental strand, 22077991 - 22077910
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||| ||||||||||||   | |||||||||| || |||||||||||||  |||||||||||| ||| ||||||    
T  22077991 ttgtgtgcaagtgtgagttatatgttttaaatcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaa 22077910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 26662064 - 26661980
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||| ||||| ||| |||| |  |||||||||||||||| |||||||| ||| ||| ||||||    
T  26662064 ttgttgtgtacaagtgtgagttatatatcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaa 26661980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 30630803 - 30630731
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||| ||||||||| ||| ||||||||| ||||||||||| | || ||||||||  |||||||||||||||||    
T  30630803 tgttatgtgcaagtgtgatttatatgtctcacatcggataaaaaattaaaggtttgacactttataagtaaga 30630731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 522 - 577
Target Start/End: Complemental strand, 3537747 - 3537692
Alignment:
Q  522 agttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||||||||||| |  |||||||||||||||| |||| |||||||    
T  3537747 agttatatgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaaga 3537692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 504 - 559
Target Start/End: Complemental strand, 35154205 - 35154150
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttg 559  Q
    ||||||||||||||| |||||||||||||||||||| |||| |  |||||||||||    
T  35154205 ttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttg 35154150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 522 - 588
Target Start/End: Complemental strand, 5528902 - 5528836
Alignment:
Q  522 agttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||| ||||||||||| |  |||||||||||||||  |||||| ||||| ||||||||||    
T  5528902 agttatatgtctcacatcggataaaagagtaaaggttgaacatcttataaataagaggactcataaa 5528836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 566
Target Start/End: Complemental strand, 47379943 - 47379889
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactt 566  Q
    ||||||| |||||||||| |||||||||||||||| ||||  |||||||||||||    
T  47379943 tgcaagtgtgagttatatatcccacatcggatagaaaagtggaggttgaacactt 47379889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 37555722 - 37555795
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||  |||| ||||||||| ||||||||||||||| |  ||| ||||||||| || ||||||||||||    
T  37555722 ttgttgtgtaaaagtgtgagttataagtcccacatcggataaaatagtgaaggttgaatacattataagtaaga 37555795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 505 - 573
Target Start/End: Original strand, 4878796 - 4878864
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    |||||||||||| | |||||||||||| |||||||||||| |  ||| ||| ||||||| |||||||||    
T  4878796 tgttgtgtgcaattgtgagttatatgttccacatcggataaaatagtgaagcttgaacattttataagt 4878864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 316
Target Start/End: Complemental strand, 23392788 - 23392696
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaa-tcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtc 316  Q
    |||||||||| |||||| || || ||||||| |||||| |||| |||| | ||||||   |||||||||||||||| ||| ||||||||||||    
T  23392788 attgtgcatttaatattttaaaattttaaaaatcttatatttttaagataaaatttattttttaattccatttttagatttttaacttgtgtc 23392696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 537 - 588
Target Start/End: Complemental strand, 22077243 - 22077192
Alignment:
Q  537 atcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||| |||||||||||||| || |||||||||||| ||| ||||||    
T  22077243 atcggatagaaaagtaaaggttgaataccttataagtaagaggacccataaa 22077192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 588
Target Start/End: Complemental strand, 1187527 - 1187446
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||| ||| ||||||||| ||||||| ||| | ||||  ||||| |||| ||||||||| ||| ||| ||||||    
T  1187527 ttgtgtgcaagtgtgaattatatgtctcacatcgaatataaaagtggaggttaaacattttataagtgagaagacccataaa 1187446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 564
Target Start/End: Complemental strand, 45494137 - 45494084
Alignment:
Q  512 tgcaagtatgagtt-atatgtcccacatcggatagagaagtaaaggttgaacac 564  Q
    ||||||| |||||| ||||||||||||||||||| |  ||||||||||||||||    
T  45494137 tgcaagtgtgagtttatatgtcccacatcggataaaatagtaaaggttgaacac 45494084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 305 - 337
Target Start/End: Original strand, 34711038 - 34711070
Alignment:
Q  305 ttaacttgtgtcataagcgcacaagttaacatt 337  Q
    ||||||||||||||||| |||||||||||||||    
T  34711038 ttaacttgtgtcataagggcacaagttaacatt 34711070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 512 - 544
Target Start/End: Complemental strand, 50051809 - 50051777
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggata 544  Q
    ||||||| |||||||||||||||||||||||||    
T  50051809 tgcaagtgtgagttatatgtcccacatcggata 50051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 7e-26; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 1085782 - 1085698
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||| ||| ||||||    
T  1085782 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaa 1085698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 225 - 340
Target Start/End: Complemental strand, 24211399 - 24211285
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    |||||| ||||||||||| |||||||  |||||| |||||||||| |||||||||| |||||||||| ||||||| |||||||||||||||| | | |||    
T  24211399 attgtgtattcaatattcaagaaattggaaatctaatcttttcaaaacataatttatgatttaattctatttttagattcttaacttgtgtcctta-cgc 24211301  T
Q  325 acaagttaacattacc 340  Q
    ||||||||||| ||||    
T  24211300 acaagttaacactacc 24211285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 7517572 - 7517656
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  7517572 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 7517656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 504 - 595
Target Start/End: Original strand, 43241487 - 43241578
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg 595  Q
    ||||||||||||||| |||||||||||| |||||||||||| | || |||||||||||||| |||||||||| | |||||||||| ||||||    
T  43241487 ttgttgtgtgcaagtgtgagttatatgttccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaacttattg 43241578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 7554017 - 7554090
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  7554017 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaaga 7554090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 229 - 298
Target Start/End: Complemental strand, 33902284 - 33902215
Alignment:
Q  229 tgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccattttt 298  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||    
T  33902284 tgcatttaatattttagaaatttaaaatcttatcttttcaagacataatttataatttaattccattttt 33902215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 23543 - 23419
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||||||| | |||||||||||| |||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||  ||||| |||| ||    
T  23543 ttgttgtgtgcaattgtgagttatatgttccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaagg 23444  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  23443 ttttgggtaagagtgtggtgtctct 23419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 576
Target Start/End: Original strand, 24177427 - 24177499
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaag 576  Q
    ||||||||||||||||||||||||||||||||||||||||| |  |||||||| ||||||| |||||||||||    
T  24177427 ttgttgtgtgcaagtatgagttatatgtcccacatcggataaaagagtaaaggctgaacaccttataagtaag 24177499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 30244262 - 30244346
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||||||||||||||||| |  ||||||||||||| || |||||||||||| ||||||||||    
T  30244262 ttgttgtgtacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggactcataaa 30244346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 627
Target Start/End: Original strand, 30245069 - 30245193
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||| ||||| |||||||||||| |||||||||||| |  |||||||||||||||| |||||||||||| ||| |||||| | |||| |||| ||    
T  30245069 ttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaactcattgccttaagg 30245168  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  30245169 ttttgggtaagagtgtggtgtctct 30245193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 45434628 - 45434712
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| | ||||||||||||||||||||||| | ||||||||||||||||| |||||||||||| ||| ||||||    
T  45434628 ttgttgtgtacaagtgtaagttatatgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaa 45434712  T

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Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 8128606 - 8128523
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| |||||||||||||||| |||||||||| || |||||||||||||| ||||| |||||| ||| ||||||    
T  8128606 tgttgtgtgcaagtgtgagttatatgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaa 8128523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 28301708 - 28301625
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| ||||||||||||| ||||||||||||| ||||||| | ||||||| |||||||||||| ||| ||||||    
T  28301708 tgttgtgtgcaagtgtgagttatatgtctcacatcggatagaaaagtaaaagctgaacaccttataagtaagaggacccataaa 28301625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 118467 - 118394
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| | |||||||||||||||||| |||||| ||||||||||||||||| | ||||||||||    
T  118467 ttgttgtgtgcaagtgtaagttatatgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaaga 118394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 30245486 - 30245559
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| |||||||||||||||||||| |||| |  |||||||||||||||| ||||||||||||    
T  30245486 ttgttgtgtgcaagtgtgagttatatgtcccacatcagataaaagagtaaaggttgaacaccttataagtaaga 30245559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 30255331 - 30255404
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| || |||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  30255331 ttgttgtgtgcaagtgtgcgttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaaga 30255404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 627
Target Start/End: Original strand, 11845199 - 11845307
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcataagaatat 618  Q
    |||||||||||| |||||||||||| |  |||||||||||||||| |||||||||||| ||| |||||||  |||| |||| ||||||| |||||| | |    
T  11845199 tgagttatatgttccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggataagagtgt 11845298  T
Q  619 ggtgtctct 627  Q
    |||||||||    
T  11845299 ggtgtctct 11845307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 16569188 - 16569272
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||  ||||||||||||| || |||||||||||| ||| ||||||    
T  16569188 ttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaa 16569272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 16596474 - 16596390
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||  ||||||||||||| || |||||||||||| ||| ||||||    
T  16596474 ttgttgtatgcaagtgtgagttatatgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaa 16596390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 22566828 - 22566744
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||| ||||| ||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  22566828 ttgttgtatgcaagtgtgagtaatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 22566744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 627
Target Start/End: Original strand, 29157565 - 29157681
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcat 610  Q
    ||||||| |||||||||||||||||| |||||| |  |||||||||||||||| |||||||||||| ||| |||||||  |||| |||| |||||||  |    
T  29157565 tgcaagtgtgagttatatgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaaggttttgggt 29157664  T
Q  611 aagaatatggtgtctct 627  Q
    |||| | ||||||||||    
T  29157665 aagagtgtggtgtctct 29157681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 45754708 - 45754791
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||||||| |||||||||| |  |||||| ||||||||| |||||||||||||||||||||||    
T  45754708 ttgttgtgtacaagtgtgagttatatgtcc-acatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaa 45754791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 30244693 - 30244766
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||||||||||||||| ||||| |  |||||||||||||||| |||||| |||||    
T  30244693 ttgttgtgtgcaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataaataaga 30244766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 36109083 - 36109010
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| |||||||||| || ||||||||||| |  |||||||||||||||| ||||||||||||    
T  36109083 ttgttgtgtgcaagtgtgagttatatttctcacatcggataaaagagtaaaggttgaacaccttataagtaaga 36109010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 518 - 625
Target Start/End: Original strand, 19122738 - 19122845
Alignment:
Q  518 tatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcataagaat 616  Q
    |||||||||||||||| |||||||||| |  |||||||||||||||| |||||||||||| |||||||||||  |||| |||| |||||||  ||||| |    
T  19122738 tatgagttatatgtcc-acatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgggtaagagt 19122836  T
Q  617 atggtgtct 625  Q
     ||||||||    
T  19122837 gtggtgtct 19122845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 34218200 - 34218116
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||| | ||||||||||||| ||||||||||| | ||||||| ||||||||| |||||||| ||| ||||||||||    
T  34218200 ttgttgtgtacaaatgtgagttatatgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaa 34218116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 37533168 - 37533092
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||| ||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  37533168 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 37533092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 40094940 - 40094856
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||||||| ||||||| ||| |  |||||||||| ||||| |||||||||||| ||| ||||||    
T  40094940 ttgttgtgtgcaagtgtgagttatatgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaa 40094856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 45433233 - 45433317
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||||  |||||||||||| |  |||||||||||||||| ||||||||||||  |||||||||    
T  45433233 ttgttgtgtacaagtgtgagttatatgatccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaa 45433317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 507 - 574
Target Start/End: Original strand, 36622955 - 36623022
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagta 574  Q
    |||||||||||| ||||||||||||||||||||||||| |  |||||||||| |||| ||||||||||    
T  36622955 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttaaacattttataagta 36623022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 507 - 581
Target Start/End: Original strand, 41854630 - 41854703
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgac 581  Q
    ||||||||||||||||||||||||||||||||| | || |  |||||||||||||||| ||||||| ||||||||    
T  41854630 ttgtgtgcaagtatgagttatatgtcccacatcag-taaaagagtaaaggttgaacaccttataagcaagatgac 41854703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 589
Target Start/End: Complemental strand, 36939899 - 36939814
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    ||||| ||||||||| |||||||||||||||| |||| ||| |  |||||| ||||||||| |||||||||||| ||| |||||||    
T  36939899 ttgttctgtgcaagtgtgagttatatgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaat 36939814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 507 - 588
Target Start/End: Complemental strand, 40230454 - 40230373
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||| | ||||||||||||||||||| ||| | ||||||| ||||||||  |||||||||||| ||| ||||||    
T  40230454 ttgtgtgcaagtgtaagttatatgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaa 40230373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 243 - 343
Target Start/End: Original strand, 9603522 - 9603622
Alignment:
Q  243 tagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgcacaagttaacattaccct 342  Q
    ||||||||||||||||||||||||||| |||  ||||| | |||||||| |||||||| || ||||||| | || | |  |||||||||||||| |||||    
T  9603522 tagaaatttaaaatcttatcttttcaaaacaatatttatgttttaattctatttttaactttttaacttatatcctcaaggcacaagttaacataaccct 9603621  T
Q  343 t 343  Q
    |    
T  9603622 t 9603622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 243 - 343
Target Start/End: Original strand, 9831093 - 9831193
Alignment:
Q  243 tagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgcacaagttaacattaccct 342  Q
    ||||||||||||||||||||||||||| |||  ||||| | |||||||| |||||||| || ||||||| | || | |  |||||||||||||| |||||    
T  9831093 tagaaatttaaaatcttatcttttcaaaacaatatttatgttttaattctatttttaactttttaacttatatcctcaaggcacaagttaacataaccct 9831192  T
Q  343 t 343  Q
    |    
T  9831193 t 9831193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 509 - 573
Target Start/End: Original strand, 10341829 - 10341893
Alignment:
Q  509 gtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    |||||||| ||| ||||||||||| ||||||||||||| ||||  ||||||||||||||||||||    
T  10341829 gtgtgcaaatataagttatatgtctcacatcggatagaaaagtggaggttgaacactttataagt 10341893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 22567204 - 22567121
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||| ||||| |||||||| |||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  22567204 ttgttgtatgcaagtgtgagtaatatgtcc-acatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 22567121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 36534950 - 36534866
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| | | ||||||||||||| ||||||| |  |||| ||||||||||| |||||||||||| ||| ||||||    
T  36534950 ttgttgtgtgcaagtgtaacttatatgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaa 36534866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 41910760 - 41910676
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||| |||| ||||||||||||||||||||||||| |  ||||||||||||| || |||||| | ||| ||| ||||||    
T  41910760 ttgttgtgtgtaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacccataaa 41910676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 225 - 308
Target Start/End: Original strand, 46603761 - 46603842
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaa 308  Q
    ||||||||||  || || ||||||||||||||||||||||||||||||  ||||||   ||||||||||||||||| |||||||    
T  46603761 attgtgcatttcatgttttagaaatttaaaatcttatcttttcaagac--aatttatattttaattccatttttaacttcttaa 46603842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 234 - 287
Target Start/End: Original strand, 4040895 - 4040948
Alignment:
Q  234 tcaatattctagaaatttaaaatcttatcttttcaagacataatttaagattta 287  Q
    |||||||||||||| |||||||| |||||||||||||||| |||||| ||||||    
T  4040895 tcaatattctagaattttaaaatattatcttttcaagacaaaatttatgattta 4040948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 29994677 - 29994620
Alignment:
Q  284 tttaattccatttttaaattcttaacttgtgtcataagcgcacaagttaacattaccc 341  Q
    ||||||| ||||||||| |||||||||| ||||||||| |||||||||||||| ||||    
T  29994677 tttaatttcatttttaatttcttaacttatgtcataagagcacaagttaacatgaccc 29994620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 47129087 - 47129171
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||  ||||| ||||||||||||| ||||||||||| |  ||||||||||||||   |||||||||||| ||| ||||||    
T  47129087 ttgttgtgcacaagtgtgagttatatgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaa 47129171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 522 - 588
Target Start/End: Original strand, 6054570 - 6054636
Alignment:
Q  522 agttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||| ||||||||||| |  |||||| ||||||||| |||||||||||| ||| ||||||    
T  6054570 agttatatgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaa 6054636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 515 - 577
Target Start/End: Original strand, 20599317 - 20599379
Alignment:
Q  515 aagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||| |||||||||||||||| |||||||| | ||||||||| | |||||||||||| |||||    
T  20599317 aagtgtgagttatatgtcccatatcggataaaaaagtaaaggataaacactttataaataaga 20599379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 566
Target Start/End: Complemental strand, 36967395 - 36967333
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactt 566  Q
    ||||||||| ||||| ||||||||||||| ||||||||||| | |||||||| || |||||||    
T  36967395 ttgttgtgtacaagtgtgagttatatgtctcacatcggataaaaaagtaaagattaaacactt 36967333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 512 - 577
Target Start/End: Original strand, 14681510 - 14681575
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||| | |||||||||||||||||| |||| |  |||||||||||||||| || |||||||||    
T  14681510 tgcaagtgtaagttatatgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaaga 14681575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 24838868 - 24838795
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||  |||| | ||||||||||| ||||||| ||| |  |||||||||||||||| ||||||||||||    
T  24838868 ttgttgtgtataagtgtaagttatatgtctcacatcgaataaaagagtaaaggttgaacaccttataagtaaga 24838795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 515 - 627
Target Start/End: Complemental strand, 37533519 - 37533406
Alignment:
Q  515 aagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcataag 613  Q
    |||| |||||||||||| | |||| | ||| |  |||||||||||||||| |||||||||||| ||| |||||||  |||| |||| |||||||  ||||    
T  37533519 aagtgtgagttatatgttctacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaag 37533420  T
Q  614 aatatggtgtctct 627  Q
    | | ||||||||||    
T  37533419 agtgtggtgtctct 37533406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 505 - 562
Target Start/End: Complemental strand, 40094559 - 40094502
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaac 562  Q
    |||||||||||||| |||||||||||||| ||||| |||| |  ||||||||||||||    
T  40094559 tgttgtgtgcaagtgtgagttatatgtccaacatcagataaaagagtaaaggttgaac 40094502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 225 - 341
Target Start/End: Complemental strand, 16831681 - 16831565
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||||||||||||||  |  ||| |||||| ||||| ||||||| ||| || ||| | |||| ||| ||||||| || ||||||||||| | ||||  |    
T  16831681 attgtgcattcaatatcttgaaaagttaaaaacttatattttcaatacaaaacttatgttttatttctatttttacatccttaacttgtgccctaaggac 16831582  T
Q  325 acaagttaacattaccc 341  Q
    |||||||||||| ||||    
T  16831581 acaagttaacatgaccc 16831565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 225 - 343
Target Start/End: Original strand, 18699990 - 18700108
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||| ||||||||||  || || ||| |||| || ||||||||| ||| || |||   ||||||||||||||||  ||||||||||||| |   || ||    
T  18699990 attgtacattcaatatattaaaagtttgaaattttgtcttttcaatacaaaagttactttttaattccatttttagtttcttaacttgtgcccctagggc 18700089  T
Q  325 acaagttaacattaccctt 343  Q
    |||||||||||| ||||||    
T  18700090 acaagttaacatgaccctt 18700108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 577
Target Start/End: Original strand, 30032575 - 30032632
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||||||||| ||| |  |||||  ||||||||| ||||||||||||    
T  30032575 tgagttatatgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaaga 30032632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 3e-25; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 225 - 341
Target Start/End: Original strand, 11152224 - 11152346
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatt------taagatttaattccatttttaaattcttaacttgtgtcat 318  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||      ||  |||||||| |||||||||||||||||||||| || |    
T  11152224 attgtgcattcaatattctagaaatttaaaatcttatcttctcaagacataatttactactataatttaatttcatttttaaattcttaacttgtatcct 11152323  T
Q  319 aagcgcacaagttaacattaccc 341  Q
    ||  | ||||||||||| |||||    
T  11152324 aaaggtacaagttaacactaccc 11152346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 28254403 - 28254279
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||| ||| |||||| | |||| |||| ||    
T  28254403 ttgttgtgtgccagtgtgacttatatgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaagg 28254304  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  28254303 ttttgggtaagagtgtggtgtctct 28254279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 28531479 - 28531407
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||    
T  28531479 tgttgtgtgcaagtgtgagttatatgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaaga 28531407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 962591 - 962674
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||| ||| ||||||    
T  962591 tgttgtatgcaagtgtgagttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaa 962674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 6421377 - 6421461
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||  ||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||||||||||    
T  6421377 ttgttgtgcacaagtgtgagttatatgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaa 6421461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 505 - 588
Target Start/End: Original strand, 42514642 - 42514725
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| ||||||| |||||||||||||| ||||| |||||| ||||||||||||||||| |||||||||||| ||| ||||||    
T  42514642 tgttgtatgcaagtgtgagttatatgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaa 42514725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 2126257 - 2126183
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccattttta 299  Q
    ||||||||||||||||| || |||||||||| ||||| |||||||||||| ||||| ||||||||||||||||||    
T  2126257 attgtgcattcaatattttaaaaatttaaaaacttatattttcaagacatgatttatgatttaattccattttta 2126183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 509 - 587
Target Start/End: Original strand, 7598606 - 7598684
Alignment:
Q  509 gtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataa 587  Q
    |||||||||| |||||||||||||||||||| |||| | ||||||||||||||||| |||||||||||| ||| |||||    
T  7598606 gtgtgcaagtgtgagttatatgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggacccataa 7598684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 523 - 581
Target Start/End: Complemental strand, 40163520 - 40163462
Alignment:
Q  523 gttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgac 581  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  40163520 gttatatgtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagatgac 40163462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 577
Target Start/End: Complemental strand, 38796384 - 38796311
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  |||||| ||||||||| ||||||||||||    
T  38796384 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaacagtaaatgttgaacaccttataagtaaga 38796311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 15880255 - 15880339
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| |||||||||||| |||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  15880255 ttgttgtgtacaagtgtgagttatatgttccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaa 15880339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 16542441 - 16542525
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||| ||||||||||||||| |  |||||||||||||||| |||||| ||||| |||| |||||    
T  16542441 ttgttgtgtgcaagtgtgagttataagtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacttataaa 16542525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 528 - 588
Target Start/End: Complemental strand, 28254254 - 28254194
Alignment:
Q  528 atgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  28254254 atgtctcacatcggatagaaaagtaaaggttgaacactttataagtaagaggactcataaa 28254194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 36006045 - 36005962
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||| ||||| ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||||||| ||| ||||||    
T  36006045 ttgttgtgtacaagtgtgagttatatgtcccacatcgaataga-aagtaaaagttgaacaccttataagtaagaggacccataaa 36005962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 36178763 - 36178687
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  36178763 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 36178687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 512 - 588
Target Start/End: Original strand, 37106188 - 37106264
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  37106188 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 37106264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 38796786 - 38796702
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| |||||||||||||||||||| |||| |  | |||||||||||||| |||||||||||| ||| ||||||    
T  38796786 ttgttgtgtgcaagtgtgagttatatgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaa 38796702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 505 - 577
Target Start/End: Complemental strand, 40679794 - 40679722
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    |||||||||||| | |||||||||||||||| |||||||||| |||||| |||||||||| ||||||||||||    
T  40679794 tgttgtgtgcaaatgtgagttatatgtcccatatcggatagaaaagtaagggttgaacaccttataagtaaga 40679722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 509 - 588
Target Start/End: Original strand, 1769889 - 1769968
Alignment:
Q  509 gtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||| ||||||||||||| ||||||||||| |  |||||| ||||||||| |||||||||||| ||||||||||    
T  1769889 gtgtgcaagtgtgagttatatgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggactcataaa 1769968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 504 - 569
Target Start/End: Complemental strand, 36785729 - 36785664
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttat 569  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||||    
T  36785729 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttat 36785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 507 - 588
Target Start/End: Original strand, 40733512 - 40733593
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||| ||||| |||||||||||||||||||| |||| | ||||||| ||||||||| |||||||||||| ||| ||||||    
T  40733512 ttgtgtacaagtgtgagttatatgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggacccataaa 40733593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 14745825 - 14745749
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||||| ||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  14745825 tgcaagtgtgagttatatgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 14745749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 31899592 - 31899508
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||| |||| |||||||||||| |||||||||||| |  |||||| ||||||||| |||||||||||| ||| ||||||    
T  31899592 ttgttgtgtgaaagtgtgagttatatgttccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaa 31899508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 41283633 - 41283557
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| |||||||||||||||| |||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  41283633 tgcaagtgtgagttatatgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 41283557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 509 - 627
Target Start/End: Original strand, 7598225 - 7598344
Alignment:
Q  509 gtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttg 607  Q
    |||||||||| ||| |||||||| | |||||| ||||| ||||||||||| ||||| |||||| ||||| ||| |||||| | || | |||| |||||||    
T  7598225 gtgtgcaagtgtgaattatatgttctacatcgaatagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaaggttttg 7598324  T
Q  608 cataagaatatggtgtctct 627  Q
      ||||||||||||||||||    
T  7598325 ggtaagaatatggtgtctct 7598344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 607
Target Start/End: Original strand, 12910221 - 12910324
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggt 603  Q
    ||||||||| |||| |||||||||||| ||||||||||| || ||||| ||||||||| | |||||||| | |||||| ||||||| |||| |||| |||    
T  12910221 tgttgtgtgtaagtttgagttatatgttccacatcggatggaaaagtacaggttgaaccccttataagtgaaatgacttataaattcattgtcttaaggt 12910320  T
Q  604 tttg 607  Q
    ||||    
T  12910321 tttg 12910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 33561616 - 33561533
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| |||||||||||| ||||||| |||||| ||||  ||||| |||||||||||||| ||| ||| ||||||    
T  33561616 tgttgtgtgcaagtgtgagttatatgttccacatcagatagaaaagtggaggttaaacactttataagtgagaggacccataaa 33561533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 37632762 - 37632679
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| |||||||||||||| |||||||||| |  ||||||||||  ||| ||||||||||||| ||| ||||||    
T  37632762 tgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaa 37632679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 504 - 598
Target Start/End: Original strand, 6712968 - 6713062
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattgctt 598  Q
    ||||||| | ||||| ||||||||||||| ||||||||||| |  |||||| ||||||||| |||||||||||| ||| ||||||  ||||||||    
T  6712968 ttgttgtatacaagtgtgagttatatgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacctattgctt 6713062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 507 - 589
Target Start/End: Complemental strand, 37894855 - 37894773
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    |||||||||| | ||||||||||||||||||| | ||||| ||||||||| | || || |||||||||||| |||||||||||    
T  37894855 ttgtgtgcaaatgtgagttatatgtcccacattgaatagaaaagtaaaggctaaaaaccttataagtaagaagactcataaat 37894773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 5543156 - 5543091
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||| |||||||||||||||||||| |||| |  |||||||||||||||| ||||||||||||    
T  5543156 tgcaagtgtgagttatatgtcccacatccgataaaatagtaaaggttgaacaccttataagtaaga 5543091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 15511659 - 15511577
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||||  |||||||||||| |||| |||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  15511659 ttgttgtgtgcaagt--gagttatatgtcacacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaa 15511577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 504 - 561
Target Start/End: Complemental strand, 31468912 - 31468855
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaa 561  Q
    ||||||||||||||| ||||||||||||||||||||||||| |  |||||||||||||    
T  31468912 ttgttgtgtgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaa 31468855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 5542783 - 5542707
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| |||||||||||||||| |||| ||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  5542783 tgcaagtgtgagttatatgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 5542707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 9231242 - 9231314
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||| |||||||||||||||||| || ||| |||||| ||||||||||||||||  |||||| |||||    
T  9231242 tgttgtgtgtaagtatgagttatatgtctcatatcagatagaaaagtaaaggttgaacatattataaataaga 9231314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 505 - 589
Target Start/End: Complemental strand, 33954426 - 33954342
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaat 589  Q
    |||||||||||||| |||||||||||||||||||| |||||| ||||  ||||| |||| | ||||| | | |||||||||||||    
T  33954426 tgttgtgtgcaagtgtgagttatatgtcccacatcagatagaaaagttgaggttaaacattatataacttaaatgactcataaat 33954342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 588
Target Start/End: Complemental strand, 36178427 - 36178351
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||||||||||||| ||||||| |  ||||||||| |||||| |||||||||||  ||||||||||    
T  36178427 tgcaagtgtgagttatatgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggactcataaa 36178351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 512 - 576
Target Start/End: Original strand, 37105924 - 37105988
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaag 576  Q
    ||||||| ||||||||||||||||||||| ||| |  |||||||||||||||| |||||||||||    
T  37105924 tgcaagtgtgagttatatgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaag 37105988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 33953936 - 33953853
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||| | ||||||||| |||||||||| |||||| ||||  |||||||||||| ||||||| ||| ||| ||||||    
T  33953936 tgttgtgtgcaaatgtgagttataagtcccacatcagatagaaaagtggaggttgaacactatataagtgagaggacccataaa 33953853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 504 - 575
Target Start/End: Complemental strand, 37895227 - 37895156
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaa 575  Q
    ||||||||||| ||| ||||||||||||||||||||||||||| || |||| |||||| || ||| ||||||    
T  37895227 ttgttgtgtgcgagtttgagttatatgtcccacatcggatagaaaaataaaagttgaaaaccttaaaagtaa 37895156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 570
Target Start/End: Original strand, 29676895 - 29676961
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttata 570  Q
    |||||||||||| || ||||||||||||||||||||||||| |  |||||||||| ||||| |||||    
T  29676895 ttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggtttaacaccttata 29676961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 507 - 573
Target Start/End: Complemental strand, 35580886 - 35580820
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    |||||||||||| ||||||||||||||||||||||||| |  | |||| ||||||||| ||||||||    
T  35580886 ttgtgtgcaagtgtgagttatatgtcccacatcggataaaacaataaatgttgaacaccttataagt 35580820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 588
Target Start/End: Complemental strand, 29873704 - 29873619
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||||  || |||| |||||||||||| |||||| ||||  |||||||||| |||||||||  || ||||||||||    
T  29873704 attgttgtgtgcaagggtgtgttacatgtcccacatcagatagaaaagtggaggttgaacattttataagtgggaggactcataaa 29873619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 540
Target Start/End: Original strand, 3672711 - 3672747
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcg 540  Q
    |||||||||||||||||||||||||||||||||||||    
T  3672711 ttgttgtgtgcaagtatgagttatatgtcccacatcg 3672747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 12529194 - 12529110
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||| ||||||| |||||||||||||| |||||  ||| |  ||||||| ||||||||  ||||||||||| ||||||||||    
T  12529194 ttgttgtatgcaagtgtgagttatatgtcctacatcaaataaaacagtaaagattgaacaccgtataagtaagaggactcataaa 12529110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 627
Target Start/End: Original strand, 33731656 - 33731764
Alignment:
Q  520 tgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttagggttttgcataagaatat 618  Q
    |||||||||| || ||||||||||| |  |||||||||||| ||| |||||||||||| ||  ||||||  ||||| |||| |||||||  ||||| |||    
T  33731656 tgagttatatatctcacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgggtaagagtat 33731755  T
Q  619 ggtgtctct 627  Q
    |||||||||    
T  33731756 ggtgtctct 33731764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 507 - 587
Target Start/End: Original strand, 40733878 - 40733958
Alignment:
Q  507 ttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataa 587  Q
    |||||| ||||| ||||||||||||||||||||| ||| |  ||||||| || ||||| |||||||||||| | |||||||    
T  40733878 ttgtgtacaagtgtgagttatatgtcccacatcgaataaaagagtaaagatttaacaccttataagtaagagggctcataa 40733958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 505 - 574
Target Start/End: Original strand, 42515005 - 42515078
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatg----tcccacatcggatagagaagtaaaggttgaacactttataagta 574  Q
    ||||||||||| || |||||||||||    |||||||||||||||| ||||||||||| ||||| |||||||||    
T  42515005 tgttgtgtgcaggtgtgagttatatgtatgtcccacatcggatagaaaagtaaaggttaaacaccttataagta 42515078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 505 - 580
Target Start/End: Original strand, 5367448 - 5367523
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatga 580  Q
    |||||||| ||||| |||  ||||||||||| |||||||| |  || ||||||||||||| |||||||||||||||    
T  5367448 tgttgtgtacaagtgtgatatatatgtcccagatcggataaaagagcaaaggttgaacaccttataagtaagatga 5367523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 508 - 571
Target Start/End: Complemental strand, 29874185 - 29874122
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataa 571  Q
    ||||| ||||| || ||||||||||||||||| |||||| ||||  ||||||||||||||||||    
T  29874185 tgtgtacaagtgtgtgttatatgtcccacatcagatagaaaagtggaggttgaacactttataa 29874122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 503 - 566
Target Start/End: Original strand, 30313169 - 30313232
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactt 566  Q
    |||||||||||||||  || |||||||||| ||||||||||||| ||||  |||||||||||||    
T  30313169 attgttgtgtgcaagcgtgtgttatatgtctcacatcggatagaaaagtggaggttgaacactt 30313232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 573
Target Start/End: Original strand, 30323455 - 30323525
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagt 573  Q
    |||||||||||||||| || ||||||||||||| ||| |||||| || |  ||||||||||||||| ||||    
T  30323455 attgttgtgtgcaagtgtgtgttatatgtcccaaatcagatagaaaattggaggttgaacactttagaagt 30323525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 31259785 - 31259698
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatc---ggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||| ||||  |||||||||||| ||||||   ||||| |  |||||||||| ||||| |||||||||||||||| ||||||    
T  31259785 ttgttgtgtgtaagtgcgagttatatgtctcacatcatcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaa 31259698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 544
Target Start/End: Original strand, 3673077 - 3673117
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggata 544  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  3673077 ttgttgtgtgcaagtgtgagttatatgtcccacattggata 3673117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 560
Target Start/End: Original strand, 6421296 - 6421352
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttga 560  Q
    ||||||||| ||||| | ||||||||||||||||||||||| |  ||||||||||||    
T  6421296 ttgttgtgtacaagtgtaagttatatgtcccacatcggataaaagagtaaaggttga 6421352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 528 - 588
Target Start/End: Original strand, 6422126 - 6422186
Alignment:
Q  528 atgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||| |||| | ||||||||||||||||| |||||| ||||| ||| ||||||    
T  6422126 atgtcccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaa 6422186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 505 - 563
Target Start/End: Original strand, 16590881 - 16590940
Alignment:
Q  505 tgttgtgtgcaagtatgagttatatgtcccacatcggat-agagaagtaaaggttgaaca 563  Q
    |||||||||||||| ||||||||||||||||||||  || | | ||||||||||||||||    
T  16590881 tgttgtgtgcaagtgtgagttatatgtcccacatcaaataaaaaaagtaaaggttgaaca 16590940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 336
Target Start/End: Original strand, 37980372 - 37980483
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||||||||||||||  || || ||| |||| |||| ||||||| ||| || |||   ||||||||||||||||  ||||||||||||| | | ||  |    
T  37980372 attgtgcattcaatatattaaaagtttgaaattttatattttcaatacaaaagttactttttaattccatttttagtttcttaacttgtgcccttaggac 37980471  T
Q  325 acaagttaacat 336  Q
    ||||||||||||    
T  37980472 acaagttaacat 37980483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 546
Target Start/End: Complemental strand, 43443149 - 43443106
Alignment:
Q  503 attgttgtgtgcaagtatgagttatatgtcccacatcggataga 546  Q
    |||||||||||||||| | |||||||||||||||||| ||||||    
T  43443149 attgttgtgtgcaagtgtaagttatatgtcccacatcagataga 43443106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 530 - 576
Target Start/End: Complemental strand, 36178311 - 36178265
Alignment:
Q  530 gtcccacatcggatagagaagtaaaggttgaacactttataagtaag 576  Q
    ||||||||||||||| |  |||||||||||||||| |||||||||||    
T  36178311 gtcccacatcggataaaatagtaaaggttgaacaccttataagtaag 36178265  T

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Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 588
Target Start/End: Complemental strand, 41678534 - 41678449
Alignment:
Q  505 tgttgtgtgcaagtatgagttatat--gtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    |||||||||||||| ||||||||||  ||| |||||| |||||| |||   ||||| |||||||||||||| ||| ||| ||||||    
T  41678534 tgttgtgtgcaagtgtgagttatatatgtctcacatcagatagaaaaggggaggttaaacactttataagtgagaggacccataaa 41678449  T

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Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 342
Target Start/End: Complemental strand, 4762099 - 4762058
Alignment:
Q  301 attcttaacttgtgtcataagcgcacaagttaacattaccct 342  Q
    |||||||||||||||| |||| |||||||||||||| |||||    
T  4762099 attcttaacttgtgtcttaagggcacaagttaacatgaccct 4762058  T

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Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 505 - 571
Target Start/End: Original strand, 23346228 - 23346296
Alignment:
Q  505 tgttgtgtgcaagtatgagttatat--gtcccacatcggatagagaagtaaaggttgaacactttataa 571  Q
    |||||||||| ||| ||||||||||  ||| ||||||| ||||| ||||||||||| ||||| ||||||    
T  23346228 tgttgtgtgcgagtgtgagttatatatgtctcacatcgtatagaaaagtaaaggttaaacaccttataa 23346296  T

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Target: scaffold0078 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 5349 - 5433
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| |||||||||||| ||||||||||||||  |||||||||||||||| |||||||||||| ||| ||||||    
T  5349 ttgttgtgtgcaagtgtgagttatatgttccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacccataaa 5433  T

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Target: scaffold0078; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 627
Target Start/End: Original strand, 4974 - 5098
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||||||||| ||| ||||||||| ||||||||| |||  |||||||||| || |  |||||||||| | ||| |||||| | |||| |||| ||    
T  4974 ttgttgtgtgcaagtgtgaattatatgtctcacatcggagagaacagtaaaggtttaatatcttataagtaaaaagacccataaactcattgccttatgg 5073  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| | ||||||||||    
T  5074 ttttgggtaagagtgtggtgtctct 5098  T

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Target: scaffold0402 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0402
Description:

Target: scaffold0402; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 225 - 335
Target Start/End: Original strand, 3012 - 3120
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||||||| ||| |  | ||||||||||||| || |||||||||||||| ||| || ||    
T  3012 attgtgcattcaatattttagaactttaaagtcttatcttttcaagacaaaatct--gttttaattccatttatagattcttaacttgtgacattagggc 3109  T
Q  325 acaagttaaca 335  Q
    |||||||||||    
T  3110 acaagttaaca 3120  T

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Target: scaffold0734 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 504 - 588
Target Start/End: Original strand, 5769 - 5853
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |  |||||||||||||||| |||||||||||| ||| ||||||    
T  5769 ttgttgtgtgcaagtgtgagttatatgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaa 5853  T

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Target: scaffold0734; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 504 - 577
Target Start/End: Original strand, 5388 - 5461
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||||||| |||||||||||||| |||||||||| |  |||||||||||||||| ||||||||||||    
T  5388 ttgttgtgtgcaagtgtgagttatatgtcctacatcggataaaatagtaaaggttgaacaccttataagtaaga 5461  T

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Target: scaffold0391 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 627
Target Start/End: Complemental strand, 1272 - 1148
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaatttattg-cttaggg 602  Q
    ||||||||| ||||| ||||||||||||||||||| ||||| |  |||||||||||||||| ||||||| || | ||||||||||   |||| |||| ||    
T  1272 ttgttgtgtacaagtgtgagttatatgtcccacattggataaaagagtaaaggttgaacaccttataagaaaaaggactcataaacccattgccttaagg 1173  T
Q  603 ttttgcataagaatatggtgtctct 627  Q
    |||||  ||||| ||||||||||||    
T  1172 ttttgggtaagagtatggtgtctct 1148  T

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Target: scaffold0391; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 504 - 563
Target Start/End: Complemental strand, 3151 - 3092
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaaca 563  Q
    |||||||||||| || ||||||||||||||||||||||||| |  |||||||||||||||    
T  3151 ttgttgtgtgcaggtgtgagttatatgtcccacatcggataaaagagtaaaggttgaaca 3092  T

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Target: scaffold0702 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 512 - 577
Target Start/End: Complemental strand, 300 - 235
Alignment:
Q  512 tgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||| ||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||    
T  300 tgcaagtgtgagttatatgtcccacatcggataaaatagtaaaggttgaacaccttataagtaaga 235  T

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Target: scaffold0702; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 680 - 596
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||  ||||| |||||||||||||||||||||| || |  |||||||||||||||| |||||||||||| ||| ||||||    
T  680 ttgttgtgcacaagtgtgagttatatgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaa 596  T

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Target: scaffold0171 (Bit Score: 45; Significance: 3e-16; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 17622 - 17538
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||||||||| ||||||||||||| |||||| |||| |  |||||||||||||||| || ||||||||| ||| ||||||    
T  17622 ttgttgtgtgcaagtgtgagttatatgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaa 17538  T

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Target: scaffold0113 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 501 - 580
Target Start/End: Original strand, 39827 - 39906
Alignment:
Q  501 gaattgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatga 580  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||| ||||   ||||| || |||||||||| ||||||    
T  39827 gaattgttgtgttcaagtgtgagttatatgtcccacatcggatagaaaagtggtggttggactctttataagtgagatga 39906  T

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Target: scaffold0007 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 225 - 336
Target Start/End: Complemental strand, 176293 - 176182
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtcataagcgc 324  Q
    ||||||||||  || || ||||||||||||||| ||| |||||||||||  |||||   ||||||| ||||||||  ||||||||||||||| | || ||    
T  176293 attgtgcattttatgttttagaaatttaaaatcctatattttcaagacaacatttatattttaatttcatttttatcttcttaacttgtgtctttagggc 176194  T
Q  325 acaagttaacat 336  Q
    ||||||||||||    
T  176193 acaagttaacat 176182  T

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Target: scaffold0504 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 588
Target Start/End: Complemental strand, 10277 - 10193
Alignment:
Q  504 ttgttgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaagatgactcataaa 588  Q
    ||||||||  ||||| ||||||||||||| ||||||||||| |   ||||| ||||||||| |||||||||||| ||| ||||||    
T  10277 ttgttgtgcacaagtgtgagttatatgtctcacatcggataaaatggtaaaagttgaacaccttataagtaagaggacccataaa 10193  T

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Target: scaffold1786 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold1786
Description:

Target: scaffold1786; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 225 - 316
Target Start/End: Original strand, 400 - 491
Alignment:
Q  225 attgtgcattcaatattctagaaatttaaaatcttatcttttcaagacataatttaagatttaattccatttttaaattcttaacttgtgtc 316  Q
    |||||||||| |||||| || || ||||||||||||| |||| |||| | ||||||   ||||||| |||||||| ||| ||||||||||||    
T  400 attgtgcatttaatattttaaaattttaaaatcttatatttttaagataaaatttattttttaatttcatttttagatttttaacttgtgtc 491  T

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Target: scaffold0027 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 508 - 577
Target Start/End: Original strand, 47356 - 47425
Alignment:
Q  508 tgtgtgcaagtatgagttatatgtcccacatcggatagagaagtaaaggttgaacactttataagtaaga 577  Q
    ||||||||||| ||| ||| ||||| |||||| |||| |  ||||||| |||||||| ||||||||||||    
T  47356 tgtgtgcaagtgtgaattaaatgtctcacatccgataaaatagtaaagtttgaacaccttataagtaaga 47425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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