View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4465-Insertion-11 (Length: 265)
Name: NF4465-Insertion-11
Description: NF4465
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4465-Insertion-11 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 8 - 264
Target Start/End: Original strand, 4405597 - 4405852
Alignment:
| Q |
8 |
catagggtttgaaacatgttcagagttagtgccctgtgtcttctaaaatgttttaaagggcccatacttttccttgtcttgttctatatagtatgacttc |
107 |
Q |
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| T |
4405597 |
catagggtttgaaacatgttcagagttagtgccctgtgtcttctaaaatgttttaaagggcccatacttttccttgtcttgttctacatagcatgacttc |
4405696 |
T |
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| Q |
108 |
attatcatccaaccagttaacttgaccaaaacacccgaaaacgtttgctttaagagggaaaacaataatttccctcaatctttctgaaaaaggagtgaac |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4405697 |
attatcatccaaccagttaacttgaccaaaacacccgaaaacgtttgcttt-agagggaaaacaataatttccctcaatctttctgaaaaaggagtgaac |
4405795 |
T |
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| Q |
208 |
ctgttctgtaaccaaaattatgatgaaatgtttatacatacacatgtggtttcattt |
264 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4405796 |
ctgttctgtaaccaaaattatgatgaaatgtttatacatacacatgtggtttcattt |
4405852 |
T |
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