View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4466_high_3 (Length: 363)

Name: NF4466_high_3
Description: NF4466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4466_high_3
NF4466_high_3
[»] chr6 (30 HSPs)
chr6 (178-363)||(34364770-34364956)
chr6 (180-363)||(13487302-13487485)
chr6 (180-363)||(34244843-34245026)
chr6 (180-359)||(29889296-29889476)
chr6 (303-363)||(28918192-28918252)
chr6 (303-359)||(15832497-15832553)
chr6 (179-240)||(8475618-8475679)
chr6 (306-363)||(9763039-9763096)
chr6 (176-240)||(1195793-1195857)
chr6 (303-363)||(9697489-9697549)
chr6 (178-238)||(15615918-15615978)
chr6 (316-363)||(6919735-6919782)
chr6 (306-363)||(9285674-9285731)
chr6 (180-240)||(1368965-1369025)
chr6 (315-363)||(15299509-15299557)
chr6 (316-363)||(6358250-6358297)
chr6 (303-362)||(31412929-31412988)
chr6 (180-238)||(10105497-10105555)
chr6 (306-363)||(776155-776212)
chr6 (307-352)||(1195371-1195416)
chr6 (303-352)||(8475199-8475248)
chr6 (308-357)||(26901755-26901804)
chr6 (178-238)||(724809-724869)
chr6 (176-228)||(6357821-6357873)
chr6 (303-345)||(15616347-15616389)
chr6 (242-283)||(13487301-13487342)
chr6 (318-363)||(15299426-15299471)
chr6 (303-363)||(1368504-1368564)
chr6 (182-238)||(31413351-31413407)
chr6 (243-283)||(34244987-34245027)
[»] chr4 (68 HSPs)
chr4 (178-363)||(10633059-10633243)
chr4 (178-352)||(21012437-21012611)
chr4 (180-363)||(31473876-31474059)
chr4 (303-363)||(1539668-1539728)
chr4 (178-245)||(3803709-3803776)
chr4 (183-240)||(47108708-47108765)
chr4 (180-240)||(40547768-40547828)
chr4 (181-240)||(27284221-27284280)
chr4 (177-240)||(46242619-46242682)
chr4 (303-363)||(2125884-2125944)
chr4 (303-363)||(29091164-29091224)
chr4 (303-363)||(35470149-35470209)
chr4 (180-238)||(30303610-30303668)
chr4 (303-352)||(17727103-17727152)
chr4 (303-352)||(40338238-40338287)
chr4 (303-352)||(42775643-42775692)
chr4 (183-240)||(42776573-42776630)
chr4 (303-352)||(56339171-56339220)
chr4 (180-240)||(2126326-2126386)
chr4 (315-363)||(14982307-14982355)
chr4 (303-359)||(16516202-16516258)
chr4 (180-240)||(19461266-19461326)
chr4 (180-240)||(35470612-35470672)
chr4 (180-240)||(42775780-42775840)
chr4 (316-363)||(4896717-4896764)
chr4 (180-238)||(21782463-21782521)
chr4 (182-240)||(31948061-31948119)
chr4 (178-240)||(41139960-41140022)
chr4 (302-356)||(42776671-42776725)
chr4 (306-363)||(857266-857323)
chr4 (306-363)||(15660258-15660315)
chr4 (303-360)||(26534523-26534580)
chr4 (303-363)||(41139500-41139560)
chr4 (316-363)||(857324-857371)
chr4 (307-358)||(16300209-16300260)
chr4 (304-363)||(46242531-46242590)
chr4 (316-363)||(49111397-49111444)
chr4 (183-229)||(5579654-5579700)
chr4 (317-363)||(11040994-11041040)
chr4 (306-352)||(27284651-27284697)
chr4 (178-240)||(28751742-28751804)
chr4 (306-363)||(10128049-10128106)
chr4 (242-283)||(10633058-10633099)
chr4 (306-363)||(28845898-28845955)
chr4 (242-283)||(31473875-31473916)
chr4 (306-363)||(36455934-36455991)
chr4 (303-352)||(40548204-40548253)
chr4 (306-363)||(42844570-42844627)
chr4 (315-363)||(1112632-1112680)
chr4 (184-232)||(16299781-16299829)
chr4 (178-238)||(24705820-24705880)
chr4 (315-363)||(41498574-41498622)
chr4 (178-238)||(54566664-54566724)
chr4 (324-363)||(7352905-7352944)
chr4 (316-363)||(28845956-28846003)
chr4 (302-357)||(52493958-52494012)
chr4 (181-240)||(56118170-56118229)
chr4 (180-230)||(16516666-16516716)
chr4 (316-361)||(1107081-1107126)
chr4 (306-363)||(1107127-1107184)
chr4 (316-357)||(1112707-1112748)
chr4 (242-283)||(1539667-1539708)
chr4 (306-363)||(7352839-7352896)
chr4 (207-240)||(26534976-26535009)
chr4 (303-352)||(52295031-52295080)
chr4 (303-352)||(53760776-53760825)
chr4 (321-361)||(11348327-11348367)
chr4 (316-352)||(26250994-26251030)
[»] chr3 (71 HSPs)
chr3 (175-363)||(19475843-19476031)
chr3 (180-357)||(8762159-8762336)
chr3 (178-352)||(54761424-54761598)
chr3 (177-308)||(33871761-33871892)
chr3 (178-352)||(47714307-47714488)
chr3 (305-363)||(42005940-42005998)
chr3 (303-360)||(21307517-21307574)
chr3 (184-240)||(34396148-34396204)
chr3 (173-240)||(7977040-7977107)
chr3 (182-240)||(28181800-28181858)
chr3 (303-363)||(30766580-30766640)
chr3 (305-361)||(37054423-37054479)
chr3 (303-363)||(47767459-47767519)
chr3 (180-240)||(48948071-48948131)
chr3 (303-363)||(53470414-53470474)
chr3 (177-240)||(21731408-21731471)
chr3 (176-231)||(52527508-52527563)
chr3 (303-362)||(53129828-53129887)
chr3 (178-240)||(34089065-34089127)
chr3 (178-240)||(38506482-38506544)
chr3 (306-363)||(31070433-31070490)
chr3 (183-240)||(48824637-48824694)
chr3 (303-359)||(7976579-7976635)
chr3 (303-363)||(34088598-34088658)
chr3 (180-240)||(36397511-36397571)
chr3 (303-363)||(36397974-36398034)
chr3 (303-363)||(48947632-48947692)
chr3 (180-240)||(53469951-53470011)
chr3 (316-363)||(9129429-9129476)
chr3 (316-363)||(9137536-9137583)
chr3 (316-363)||(27251979-27252026)
chr3 (186-241)||(28092152-28092206)
chr3 (177-240)||(35279467-35279530)
chr3 (316-363)||(44692907-44692954)
chr3 (316-363)||(46672801-46672848)
chr3 (178-240)||(671186-671248)
chr3 (305-363)||(671606-671664)
chr3 (178-240)||(43863484-43863546)
chr3 (179-228)||(21307110-21307159)
chr3 (303-363)||(7302373-7302433)
chr3 (180-240)||(24241711-24241771)
chr3 (186-229)||(645741-645784)
chr3 (303-359)||(46706681-46706739)
chr3 (305-363)||(31189384-31189442)
chr3 (306-352)||(38506864-38506910)
chr3 (303-352)||(9007440-9007489)
chr3 (304-345)||(28182234-28182275)
chr3 (302-363)||(34396491-34396552)
chr3 (316-357)||(44436343-44436384)
chr3 (319-363)||(5415810-5415854)
chr3 (200-240)||(19475736-19475776)
chr3 (180-240)||(50168191-50168251)
chr3 (177-240)||(2105219-2105282)
chr3 (316-363)||(28092241-28092288)
chr3 (302-357)||(47336914-47336969)
chr3 (316-363)||(49457370-49457417)
chr3 (302-356)||(13176546-13176600)
chr3 (306-356)||(21730936-21730985)
chr3 (303-352)||(2104772-2104821)
chr3 (306-363)||(5415858-5415915)
chr3 (306-363)||(9129371-9129428)
chr3 (306-363)||(9137478-9137535)
chr3 (242-283)||(19475842-19475883)
chr3 (303-352)||(26323394-26323443)
chr3 (306-363)||(44436285-44436342)
chr3 (306-363)||(44692849-44692906)
chr3 (316-352)||(332012-332048)
chr3 (235-283)||(31189395-31189443)
chr3 (316-360)||(42130777-42130821)
chr3 (303-347)||(43863936-43863979)
chr3 (303-363)||(50168595-50168655)
[»] chr7 (76 HSPs)
chr7 (180-363)||(26161987-26162169)
chr7 (173-361)||(29639056-29639245)
chr7 (180-363)||(6498614-6498797)
chr7 (181-363)||(31632749-31632928)
chr7 (280-363)||(35776904-35776987)
chr7 (303-363)||(22391559-22391619)
chr7 (178-240)||(14602769-14602831)
chr7 (180-240)||(14790557-14790617)
chr7 (303-363)||(43791117-43791177)
chr7 (180-240)||(43791511-43791571)
chr7 (178-240)||(39342158-39342220)
chr7 (302-363)||(25189197-25189258)
chr7 (175-240)||(35456294-35456359)
chr7 (303-363)||(23455219-23455279)
chr7 (303-363)||(28539140-28539200)
chr7 (303-359)||(30524286-30524342)
chr7 (303-363)||(30629084-30629144)
chr7 (182-238)||(38320770-38320825)
chr7 (178-240)||(2411801-2411863)
chr7 (178-240)||(40496208-40496270)
chr7 (306-363)||(5644704-5644761)
chr7 (306-363)||(29065846-29065903)
chr7 (303-352)||(32650611-32650660)
chr7 (303-352)||(40667379-40667428)
chr7 (303-363)||(9784903-9784963)
chr7 (180-240)||(23548119-23548179)
chr7 (303-363)||(23548583-23548643)
chr7 (180-240)||(28538677-28538737)
chr7 (180-240)||(36328328-36328388)
chr7 (303-363)||(39342614-39342674)
chr7 (180-240)||(42817012-42817072)
chr7 (177-240)||(30587427-30587490)
chr7 (302-352)||(30080772-30080822)
chr7 (180-238)||(37460470-37460528)
chr7 (316-362)||(40110823-40110869)
chr7 (180-238)||(45181757-45181814)
chr7 (306-360)||(46069421-46069475)
chr7 (303-352)||(14790151-14790200)
chr7 (307-352)||(19865530-19865575)
chr7 (306-363)||(21635960-21636017)
chr7 (303-363)||(14603234-14603294)
chr7 (303-363)||(18789218-18789278)
chr7 (307-363)||(18789544-18789600)
chr7 (303-363)||(35455831-35455891)
chr7 (180-228)||(35488714-35488761)
chr7 (307-363)||(40110764-40110820)
chr7 (180-240)||(45984823-45984883)
chr7 (180-240)||(45989183-45989243)
chr7 (306-363)||(2057470-2057527)
chr7 (303-352)||(13814966-13815015)
chr7 (302-363)||(15990918-15990979)
chr7 (242-283)||(26162129-26162170)
chr7 (303-352)||(30587875-30587924)
chr7 (242-283)||(31632748-31632789)
chr7 (242-283)||(35776947-35776988)
chr7 (303-352)||(40495755-40495804)
chr7 (303-352)||(45984378-45984427)
chr7 (303-352)||(45988738-45988787)
chr7 (306-359)||(49052860-49052913)
chr7 (319-363)||(2057422-2057466)
chr7 (243-283)||(25189219-25189259)
chr7 (180-240)||(32651013-32651073)
chr7 (319-363)||(34388353-34388397)
chr7 (179-238)||(40495691-40495750)
chr7 (303-342)||(42816597-42816636)
chr7 (316-363)||(43955544-43955591)
chr7 (320-363)||(43955603-43955646)
chr7 (316-363)||(44915222-44915269)
chr7 (180-237)||(1580381-1580439)
chr7 (303-353)||(3905631-3905681)
chr7 (233-283)||(15990917-15990967)
chr7 (242-284)||(43791115-43791157)
chr7 (303-340)||(26416003-26416040)
chr7 (180-237)||(26416413-26416469)
chr7 (243-283)||(6498758-6498798)
chr7 (184-240)||(30080312-30080368)
[»] chr2 (74 HSPs)
chr2 (173-363)||(10480146-10480336)
chr2 (177-362)||(11532111-11532298)
chr2 (180-363)||(11793922-11794105)
chr2 (177-352)||(7684482-7684657)
chr2 (305-363)||(7167655-7167713)
chr2 (303-352)||(32840178-32840227)
chr2 (303-363)||(30698308-30698368)
chr2 (303-363)||(32839634-32839694)
chr2 (177-240)||(769521-769584)
chr2 (178-240)||(1583330-1583392)
chr2 (178-240)||(2925140-2925202)
chr2 (178-240)||(33188787-33188849)
chr2 (178-240)||(39630715-39630777)
chr2 (303-363)||(7227998-7228058)
chr2 (180-240)||(8736501-8736561)
chr2 (303-363)||(13017806-13017866)
chr2 (180-240)||(35047201-35047261)
chr2 (177-240)||(3092735-3092798)
chr2 (178-240)||(7309434-7309496)
chr2 (174-240)||(19231011-19231076)
chr2 (182-240)||(21504939-21504997)
chr2 (180-238)||(32839188-32839246)
chr2 (303-348)||(1730095-1730140)
chr2 (303-352)||(8736427-8736476)
chr2 (183-240)||(19193746-19193803)
chr2 (302-363)||(28740623-28740684)
chr2 (179-240)||(44256123-44256184)
chr2 (303-363)||(769063-769123)
chr2 (303-363)||(1583795-1583855)
chr2 (180-240)||(8735965-8736025)
chr2 (303-363)||(11141332-11141392)
chr2 (180-240)||(13018234-13018294)
chr2 (172-228)||(17906143-17906199)
chr2 (303-363)||(33189243-33189303)
chr2 (303-363)||(45094457-45094517)
chr2 (307-354)||(11607257-11607304)
chr2 (316-363)||(11716435-11716482)
chr2 (316-363)||(14365727-14365774)
chr2 (303-361)||(11594837-11594895)
chr2 (180-238)||(14306364-14306422)
chr2 (302-352)||(20935744-20935794)
chr2 (176-238)||(31703919-31703981)
chr2 (306-363)||(27033517-27033574)
chr2 (306-363)||(40026091-40026148)
chr2 (306-363)||(41461590-41461647)
chr2 (303-363)||(3092309-3092369)
chr2 (316-363)||(784820-784867)
chr2 (177-240)||(11141794-11141857)
chr2 (307-354)||(11595355-11595402)
chr2 (316-363)||(14537226-14537273)
chr2 (178-240)||(19072320-19072382)
chr2 (178-240)||(41585192-41585254)
chr2 (306-359)||(784868-784921)
chr2 (306-363)||(10244204-10244261)
chr2 (242-283)||(11793921-11793962)
chr2 (303-352)||(41585676-41585725)
chr2 (7-100)||(4746677-4746766)
chr2 (174-238)||(7611413-7611477)
chr2 (303-359)||(11606744-11606800)
chr2 (303-363)||(39630252-39630311)
chr2 (316-363)||(11532169-11532216)
chr2 (316-363)||(17180324-17180371)
chr2 (320-363)||(41461542-41461585)
chr2 (303-345)||(7611874-7611916)
chr2 (325-363)||(14365793-14365831)
chr2 (307-357)||(14954343-14954393)
chr2 (306-352)||(21504488-21504534)
chr2 (180-230)||(28021706-28021756)
chr2 (186-235)||(6996371-6996420)
chr2 (242-283)||(10480145-10480186)
chr2 (303-348)||(12263468-12263513)
chr2 (316-352)||(11684675-11684711)
chr2 (311-363)||(17905681-17905733)
chr2 (243-283)||(28740622-28740662)
[»] chr1 (79 HSPs)
chr1 (177-360)||(47541848-47542031)
chr1 (7-180)||(1389342-1389515)
chr1 (180-363)||(24273084-24273266)
chr1 (185-363)||(26500947-26501125)
chr1 (182-363)||(47165077-47165258)
chr1 (302-363)||(8224795-8224856)
chr1 (303-363)||(37448387-37448447)
chr1 (303-363)||(49659243-49659303)
chr1 (180-240)||(946869-946929)
chr1 (180-240)||(15467486-15467546)
chr1 (180-232)||(35499546-35499598)
chr1 (303-363)||(44570705-44570765)
chr1 (303-362)||(37447888-37447947)
chr1 (306-363)||(31195483-31195540)
chr1 (306-363)||(34756454-34756511)
chr1 (306-359)||(43622967-43623020)
chr1 (180-240)||(220642-220702)
chr1 (178-238)||(12293020-12293080)
chr1 (303-363)||(15467949-15468009)
chr1 (316-363)||(15034744-15034791)
chr1 (316-363)||(23536094-23536141)
chr1 (303-362)||(28632572-28632630)
chr1 (306-363)||(6470675-6470732)
chr1 (306-363)||(15034686-15034743)
chr1 (303-352)||(42230758-42230807)
chr1 (303-352)||(44571239-44571288)
chr1 (303-360)||(47820243-47820300)
chr1 (303-363)||(946402-946461)
chr1 (303-363)||(946940-947000)
chr1 (319-363)||(4038102-4038146)
chr1 (303-363)||(35491184-35491244)
chr1 (307-363)||(38277442-38277498)
chr1 (175-235)||(41480949-41481009)
chr1 (306-360)||(5474474-5474528)
chr1 (178-240)||(28632124-28632186)
chr1 (303-352)||(41822683-41822733)
chr1 (303-349)||(50471791-50471837)
chr1 (306-363)||(4038150-4038207)
chr1 (180-240)||(6470228-6470289)
chr1 (303-348)||(21267796-21267841)
chr1 (242-283)||(24273226-24273267)
chr1 (307-352)||(32128068-32128113)
chr1 (318-363)||(32287934-32287979)
chr1 (303-352)||(37447345-37447394)
chr1 (303-352)||(41822529-41822578)
chr1 (303-352)||(49216324-49216373)
chr1 (190-238)||(10166986-10167034)
chr1 (180-240)||(21267346-21267406)
chr1 (178-238)||(37036502-37036562)
chr1 (303-363)||(37036935-37036995)
chr1 (178-238)||(37446881-37446941)
chr1 (180-231)||(4663808-4663859)
chr1 (179-238)||(23969438-23969497)
chr1 (316-363)||(27804292-27804339)
chr1 (316-363)||(27935570-27935617)
chr1 (316-363)||(30190221-30190268)
chr1 (177-240)||(31166701-31166764)
chr1 (180-239)||(32128574-32128633)
chr1 (302-353)||(34003414-34003465)
chr1 (302-345)||(34003506-34003549)
chr1 (178-240)||(37447424-37447486)
chr1 (185-240)||(41822078-41822133)
chr1 (306-352)||(32572960-32573006)
chr1 (303-357)||(32647334-32647388)
chr1 (303-361)||(39887156-39887214)
chr1 (182-240)||(44571680-44571738)
chr1 (245-283)||(47165221-47165259)
chr1 (302-352)||(52135610-52135660)
chr1 (316-361)||(28745881-28745926)
chr1 (303-352)||(41823146-41823195)
chr1 (315-352)||(45565478-45565515)
chr1 (306-363)||(50005106-50005163)
chr1 (316-352)||(5474437-5474473)
chr1 (180-216)||(21088258-21088294)
chr1 (243-283)||(26501086-26501126)
chr1 (178-238)||(37447969-37448029)
chr1 (315-363)||(38277499-38277547)
chr1 (307-363)||(45565421-45565477)
chr1 (331-363)||(52280967-52280999)
[»] chr5 (82 HSPs)
chr5 (180-363)||(37722754-37722937)
chr5 (182-363)||(19533769-19533950)
chr5 (178-363)||(25935149-25935333)
chr5 (178-352)||(12064316-12064500)
chr5 (213-363)||(37145395-37145544)
chr5 (180-271)||(20320529-20320620)
chr5 (178-240)||(32249647-32249709)
chr5 (180-240)||(12480389-12480449)
chr5 (303-362)||(14834852-14834911)
chr5 (305-363)||(22303855-22303913)
chr5 (303-363)||(927329-927389)
chr5 (180-240)||(13390962-13391022)
chr5 (303-363)||(40090397-40090457)
chr5 (172-238)||(15270409-15270475)
chr5 (182-240)||(28489951-28490009)
chr5 (178-240)||(40089410-40089472)
chr5 (178-240)||(41761742-41761804)
chr5 (303-352)||(33146211-33146260)
chr5 (303-363)||(9894305-9894365)
chr5 (295-359)||(20320623-20320687)
chr5 (303-363)||(22766979-22767039)
chr5 (303-351)||(28490031-28490079)
chr5 (303-363)||(32250081-32250141)
chr5 (188-240)||(38178813-38178865)
chr5 (188-240)||(38206037-38206089)
chr5 (303-363)||(41762198-41762258)
chr5 (177-240)||(927790-927853)
chr5 (316-363)||(15373987-15374034)
chr5 (316-363)||(32390057-32390104)
chr5 (317-363)||(2721557-2721603)
chr5 (180-238)||(6771823-6771881)
chr5 (303-357)||(8255060-8255113)
chr5 (307-357)||(12479940-12479990)
chr5 (306-352)||(15270840-15270886)
chr5 (175-240)||(15579993-15580059)
chr5 (306-352)||(17542347-17542393)
chr5 (178-240)||(22304732-22304794)
chr5 (302-354)||(6772195-6772245)
chr5 (302-351)||(17492630-17492679)
chr5 (183-240)||(22304672-22304729)
chr5 (303-352)||(22305132-22305181)
chr5 (178-240)||(28490395-28490458)
chr5 (303-352)||(37241093-37241142)
chr5 (180-240)||(17541884-17541944)
chr5 (316-363)||(2316464-2316511)
chr5 (316-363)||(3563304-3563351)
chr5 (319-362)||(9764426-9764469)
chr5 (316-363)||(26281265-26281312)
chr5 (177-228)||(32317175-32317225)
chr5 (316-363)||(32470967-32471014)
chr5 (302-357)||(35379376-35379431)
chr5 (180-238)||(35111702-35111760)
chr5 (316-358)||(37241598-37241640)
chr5 (306-363)||(9764365-9764422)
chr5 (306-363)||(15374035-15374092)
chr5 (316-361)||(16515103-16515148)
chr5 (242-283)||(19533910-19533951)
chr5 (306-363)||(20523208-20523265)
chr5 (303-352)||(34105109-34105158)
chr5 (181-238)||(37091078-37091135)
chr5 (176-213)||(37145362-37145399)
chr5 (182-222)||(17492691-17492731)
chr5 (178-238)||(33995442-33995502)
chr5 (302-353)||(11601076-11601127)
chr5 (316-363)||(15804349-15804396)
chr5 (316-363)||(16515031-16515078)
chr5 (316-363)||(20523160-20523207)
chr5 (315-352)||(2550348-2550385)
chr5 (179-240)||(8255446-8255507)
chr5 (242-283)||(25935293-25935334)
chr5 (307-348)||(28489505-28489546)
chr5 (315-360)||(30519034-30519079)
chr5 (315-360)||(30559374-30559419)
chr5 (171-240)||(33146570-33146639)
chr5 (303-360)||(35111256-35111313)
chr5 (242-283)||(37145504-37145545)
chr5 (242-283)||(37722897-37722938)
chr5 (242-283)||(40090417-40090458)
chr5 (306-363)||(40643893-40643949)
chr5 (306-363)||(40809416-40809473)
chr5 (335-363)||(15804398-15804426)
chr5 (177-221)||(41789591-41789634)
[»] chr8 (66 HSPs)
chr8 (175-363)||(23011761-23011949)
chr8 (178-352)||(30444804-30444978)
chr8 (182-363)||(36103128-36103308)
chr8 (224-359)||(515449-515584)
chr8 (282-363)||(21465548-21465629)
chr8 (303-363)||(8049281-8049341)
chr8 (303-352)||(29611408-29611457)
chr8 (180-240)||(29611812-29611872)
chr8 (180-240)||(44346221-44346281)
chr8 (303-363)||(44889381-44889441)
chr8 (307-362)||(14266-14321)
chr8 (181-240)||(31980047-31980106)
chr8 (178-240)||(14727-14789)
chr8 (303-357)||(13144616-13144670)
chr8 (182-240)||(13145073-13145131)
chr8 (305-363)||(24044987-24045045)
chr8 (178-240)||(33376827-33376889)
chr8 (307-357)||(33986037-33986087)
chr8 (186-240)||(40733641-40733695)
chr8 (178-240)||(43185469-43185531)
chr8 (306-363)||(13404902-13404959)
chr8 (303-352)||(26520435-26520484)
chr8 (303-352)||(34008819-34008868)
chr8 (303-363)||(28324658-28324718)
chr8 (180-240)||(29256913-29256973)
chr8 (303-363)||(29257347-29257407)
chr8 (303-363)||(29482803-29482863)
chr8 (303-363)||(33377293-33377353)
chr8 (180-240)||(35978592-35978652)
chr8 (303-363)||(35979000-35979060)
chr8 (303-363)||(44346674-44346734)
chr8 (181-240)||(10593562-10593620)
chr8 (181-240)||(31976666-31976725)
chr8 (307-357)||(9982669-9982719)
chr8 (182-240)||(26519984-26520042)
chr8 (178-240)||(33986486-33986548)
chr8 (306-363)||(3853643-3853700)
chr8 (306-363)||(3858101-3858158)
chr8 (306-363)||(17110944-17111001)
chr8 (180-240)||(29482341-29482401)
chr8 (316-363)||(17110896-17110943)
chr8 (303-362)||(35404738-35404797)
chr8 (316-363)||(42711365-42711412)
chr8 (303-357)||(31976578-31976632)
chr8 (303-357)||(31980479-31980533)
chr8 (317-363)||(40046831-40046877)
chr8 (306-363)||(4156242-4156299)
chr8 (306-363)||(14800035-14800092)
chr8 (242-283)||(23011760-23011801)
chr8 (225-269)||(21465308-21465352)
chr8 (176-240)||(28190227-28190291)
chr8 (180-231)||(9983146-9983197)
chr8 (242-277)||(13144615-13144650)
chr8 (178-237)||(14013267-14013326)
chr8 (320-363)||(37268096-37268139)
chr8 (178-240)||(1087844-1087906)
chr8 (325-363)||(33902694-33902732)
chr8 (193-238)||(7079780-7079825)
chr8 (315-352)||(7202885-7202922)
chr8 (171-240)||(34009178-34009247)
chr8 (303-363)||(1088273-1088333)
chr8 (235-271)||(8049292-8049328)
chr8 (235-283)||(13404912-13404960)
chr8 (315-363)||(30435273-30435320)
chr8 (316-363)||(33902751-33902799)
chr8 (308-352)||(42739969-42740013)
[»] scaffold0027 (2 HSPs)
scaffold0027 (181-283)||(11276-11378)
scaffold0027 (285-361)||(10915-10991)
[»] scaffold0169 (2 HSPs)
scaffold0169 (303-363)||(4102-4162)
scaffold0169 (178-240)||(4508-4570)
[»] scaffold0039 (1 HSPs)
scaffold0039 (303-352)||(109069-109118)
[»] scaffold0318 (2 HSPs)
scaffold0318 (303-358)||(2899-2953)
scaffold0318 (180-228)||(3358-3406)
[»] scaffold0009 (1 HSPs)
scaffold0009 (316-363)||(42024-42071)
[»] scaffold0417 (1 HSPs)
scaffold0417 (183-240)||(11499-11556)
[»] scaffold1562 (1 HSPs)
scaffold1562 (319-363)||(493-537)
[»] scaffold1158 (1 HSPs)
scaffold1158 (319-363)||(2056-2100)
[»] scaffold0400 (1 HSPs)
scaffold0400 (303-363)||(4484-4544)
[»] scaffold0365 (1 HSPs)
scaffold0365 (303-363)||(5128-5188)
[»] scaffold0301 (2 HSPs)
scaffold0301 (303-363)||(7178-7238)
scaffold0301 (193-240)||(7641-7688)
[»] scaffold0129 (3 HSPs)
scaffold0129 (307-363)||(19225-19280)
scaffold0129 (311-363)||(19779-19831)
scaffold0129 (199-240)||(19326-19367)
[»] scaffold0048 (1 HSPs)
scaffold0048 (316-363)||(82970-83017)
[»] scaffold0014 (1 HSPs)
scaffold0014 (303-357)||(221182-221236)
[»] scaffold0044 (2 HSPs)
scaffold0044 (319-360)||(56304-56345)
scaffold0044 (306-363)||(56349-56406)
[»] scaffold0002 (1 HSPs)
scaffold0002 (302-356)||(130388-130442)
[»] scaffold0065 (1 HSPs)
scaffold0065 (303-348)||(9572-9617)


Alignment Details
Target: chr6 (Bit Score: 155; Significance: 3e-82; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 178 - 363
Target Start/End: Complemental strand, 34364956 - 34364770
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 277  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||  ||||    
T  34364956 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcatagcattatattt 34364857  T
Q  278 cctcaacattacattacattcccc-catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  34364856 cctcaacattacattacattccccacatccaaacaatggaattcacctcaaagtatttaaattccctcataacattacattccctca 34364770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 180 - 363
Target Start/End: Complemental strand, 13487485 - 13487302
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 279  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||    
T  13487485 agagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctagacaatttatctcaaagtatttgaattccctcgtaatattacatttcc 13487386  T
Q  280 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||||||||||    
T  13487385 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttgaattccctcataacactacattccctca 13487302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 180 - 363
Target Start/End: Original strand, 34244843 - 34245026
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 279  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||| ||| ||||| |    
T  34244843 agagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttaaattccttcataatattacatttac 34244942  T
Q  280 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||| ||||||||||||| |||||||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||    
T  34244943 tcaatattacattacatttccccatccaaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctca 34245026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 180 - 359
Target Start/End: Original strand, 29889296 - 29889476
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaatttt-aaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttc 278  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||| ||||||    
T  29889296 agagtgtgtttggatgaggtaatttgaaattttttaaagaatttaaaattctaggcaattaacctcaaagtatttgaattccttcataacattacatttc 29889395  T
Q  279 ctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 359  Q
     |||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||    
T  29889396 ttcaatattacattacattcccccatccaaataatggaattcacatcaaagtatttgaattccctcaaaacattacattcc 29889476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 28918252 - 28918192
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||    
T  28918252 atccaaacaatgaaattcacctcaaagtatttgaatttccttaaaacattacattccctca 28918192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 15832553 - 15832497
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 359  Q
    ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  15832553 atccaaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattcc 15832497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 8475679 - 8475618
Alignment:
Q  179 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||| ||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  8475679 tagagtgtgtttagatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 8475618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 9763096 - 9763039
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||    
T  9763096 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctca 9763039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 1195857 - 1195793
Alignment:
Q  176 ctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||| |||||||||||   |||||||| ||||||| |||||||||||||||||    
T  1195857 ctttagagtgtgtttgaatgaggtaattgagaaattttagagaatttgaaattctaggcaattta 1195793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 9697549 - 9697489
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||| ||||||||||| |||||| ||||||||| |||||||||||    
T  9697549 atccaaacaatggaattcacatcaaagtatttgaattccttcaaaacatcacattccctca 9697489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 15615918 - 15615978
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||||  |||||||||    
T  15615918 ttagagtgtgtttggatgaggtaattgataaattttaaagaatttaaaatattaggcaatt 15615978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 6919782 - 6919735
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  6919782 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 6919735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 9285731 - 9285674
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||| ||||||||| || ||||||||||||||||||||||||||||    
T  9285731 caaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctca 9285674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 1369025 - 1368965
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||| |||||||||   ||||| ||||||||||||||||||||| ||||||    
T  1369025 agagtgtgtttggacgaggtaattgagaaattataaagaatttaaaattctaggtaattta 1368965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 15299509 - 15299557
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||| || |||||| |||||||||||||||||||||    
T  15299509 aaattcacctcaaagtagttgaattccttcaaaacattacattccctca 15299557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 6358250 - 6358297
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||| |||||||||||||||| |||||||||||||||| |||||    
T  6358250 aattcaccacaaagtatttaaattctctcaaaacattacattacctca 6358297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 362
Target Start/End: Complemental strand, 31412988 - 31412929
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctc 362  Q
    |||||||||||| ||||||  ||||||||||| |||||||||||||||| | ||||||||    
T  31412988 atccaaacaatggaattcatatcaaagtatttgaattccctcaaaacatcatattccctc 31412929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 10105555 - 10105497
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||||||||||||||||||||   ||||||||||||||||| | || |||||||||    
T  10105555 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagacttgtaggcaatt 10105497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 776155 - 776212
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || |||| |||||||||||||||||||||||    
T  776155 caaacaatagaattcaccttaaagtagttgaatttcctcaaaacattacattccctca 776212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 1195416 - 1195371
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||    
T  1195416 aaacaatggaattcacctcaaagtatttgaaatccctcaaaacatt 1195371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 8475248 - 8475199
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||||  ||||||||| |||||||||||||||||    
T  8475248 atccaaacaatggaattcacccaaaagtatttgaattccctcaaaacatt 8475199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 26901755 - 26901804
Alignment:
Q  308 aacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    ||||||||||||||||| ||| ||||| ||||||||||||| ||||||||    
T  26901755 aacaatgaaattcacctaaaattatttgaattccctcaaaatattacatt 26901804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 724809 - 724869
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||||||||||||||||||||||   || |||| ||||||||| ||||||||| ||||    
T  724809 ttagagtgtgtttggatgaggtaattgagaattttttaagaatttagaattctaggtaatt 724869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 228
Target Start/End: Original strand, 6357821 - 6357873
Alignment:
Q  176 ctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 228  Q
    |||||||||||||||||| ||||||||| | ||||||| ||||||||| ||||    
T  6357821 ctttagagtgtgtttggacgaggtaattgggaaattttgaagaatttagaatt 6357873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 15616347 - 15616389
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctca 345  Q
    |||||||||||  ||||||||||||| ||||||||||||||||    
T  15616347 atccaaacaatagaattcacctcaaaatatttaaattccctca 15616389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 13487342 - 13487301
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||| | |||| ||||||    
T  13487342 ctcaaagtatttgaattccctcataacactacattccctcaa 13487301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 15299471 - 15299426
Alignment:
Q  318 ttcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||| || ||||| ||||||||||||||||| ||||    
T  15299471 ttcacctcaaagtagttgaattctctcaaaacattacattcgctca 15299426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 1368564 - 1368504
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||  |||||||||||||  |||| |||||||| |||| ||||||||| ||||    
T  1368564 atccaaacaatagaattcacctcaaaacatttgaattcccttaaaatattacattctctca 1368504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 31413407 - 31413351
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||| |||||||   ||||||| ||||||||| ||||||||| ||||    
T  31413407 agtgtgtttggatggggtaattgagaaattttgaagaatttagaattctagggaatt 31413351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 34244987 - 34245027
Alignment:
Q  243 tcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||| |||||| |||| ||||||    
T  34244987 tcaaagtatttgaattccctcaaaacattacattccctcaa 34245027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 178 - 363
Target Start/End: Complemental strand, 10633243 - 10633059
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 277  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  10633243 ttagagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcataatattacattt 10633144  T
Q  278 cctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  10633143 cctcaacattacattacatt-ccccatccaaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctca 10633059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 21012437 - 21012611
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 277  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||| |||||    
T  21012437 ttagagtgtgtttggatgaggtaatttaaaaattttaaagaatttaaaattctagacaatttacctcaaaatatttgaattccctcataacattacattt 21012536  T
Q  278 cctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  21012537 cctcaacattacattacattcccccatctaaacaatggaattcacctcaaaatatttaaattccctcaaaacatt 21012611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 180 - 363
Target Start/End: Complemental strand, 31474059 - 31473876
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 279  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||| |||||||    
T  31474059 agagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctagacaatttacctcaaattatttgaattccgtcataacattacatttcc 31473960  T
Q  280 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||| | |||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  31473959 tcaacattacattacattctctcatccaaacaataaaattcacctcaaagtatttgaattccctcataacattacattccctca 31473876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 1539728 - 1539668
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1539728 atccaaacaatgaaattcacctcaaagtatttgaattccctcaaaacattacattccctca 1539668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 178 - 245
Target Start/End: Complemental strand, 3803776 - 3803709
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctca 245  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||    
T  3803776 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattttaggcaacttacctca 3803709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 47108765 - 47108708
Alignment:
Q  183 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  47108765 gtgtgtttggatgaggtaattggaaaattttaaagaatttagaattctaggcaattta 47108708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 40547768 - 40547828
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  40547768 agagtgtgtttggatgaggtaattgagaaattttaaagaatttaaaattctaggcaattta 40547828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 27284221 - 27284280
Alignment:
Q  181 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  27284221 gagtgtgtttggatgatataatttgaaaattttaaagaatttagaattctaggcaattta 27284280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 46242619 - 46242682
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  46242619 tttagagtgtgtttggatgaggtaattgggaaattttaaagaatttataattctaagcaattta 46242682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 2125944 - 2125884
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  2125944 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctca 2125884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 29091224 - 29091164
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||  ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  29091224 atccaaacaatagaattcacatcaaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 35470209 - 35470149
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  35470209 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctca 35470149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 30303668 - 30303610
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||||| |||||   ||||||||||||||||||||||||||||||||    
T  30303668 agagtgtgtttggatgagataattgagaaattttaaagaatttaaaattctaggcaatt 30303610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 17727152 - 17727103
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  17727152 atccaaacaatgaaattcacctcaaagtatttgaattcccacaaaacatt 17727103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 40338238 - 40338287
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  40338238 atccaaacaatgaaattcacctcaaagtatttgaattccatcaaaacatt 40338287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 42775692 - 42775643
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  42775692 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 42775643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 42776630 - 42776573
Alignment:
Q  183 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||| ||| ||||||||    
T  42776630 gtgtgtttggatgaggtaattggaaaattttaaagaatttagaatcctaagcaattta 42776573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 56339220 - 56339171
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  56339220 atccaaacaatgaaattcacatcaaagtatttgaattccctcaaaacatt 56339171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 2126386 - 2126326
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||| |||||||   ||||||||||||||||| ||||||||||||||||    
T  2126386 agagtgtgtttggatggggtaattgagaaattttaaagaatttagaattctaggcaattta 2126326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 14982355 - 14982307
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||    
T  14982355 aaattcaccttaaagtagttaaattccctcaaaacattacattccctca 14982307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 16516258 - 16516202
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 359  Q
    |||||||||||| | ||||| |||||||||||||||||| |||||||||||||||||    
T  16516258 atccaaacaatggagttcacatcaaagtatttaaattccttcaaaacattacattcc 16516202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 19461266 - 19461326
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||| ||||||||||| |||  ||||||||||||||||||| |||||||||||    
T  19461266 agagtgtgtttgaatgaggtaattagaattttttaaagaatttaaaattttaggcaattta 19461326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 35470672 - 35470612
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||| ||||||   ||||||||||||||||| ||||||||||||||||    
T  35470672 agagtgtgtttggatgatgtaattgagaaattttaaagaatttagaattctaggcaattta 35470612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 42775780 - 42775840
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  42775780 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggaaattta 42775840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 4896717 - 4896764
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  4896717 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 4896764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 21782521 - 21782463
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||    
T  21782521 agagtgtgtttggatgaggtaattgtgaaattttaaagaatttagaattctagacaatt 21782463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 31948119 - 31948061
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||| ||||||| ||||||||| |||| ||||||||||||||||||| |||||||||||    
T  31948119 agtgcgtttggacgaggtaattggaaacttttaaagaatttaaaattttaggcaattta 31948061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 41140022 - 41139960
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||| || ||||||   ||||||||||||||||||||||||| ||||||||    
T  41140022 ttagagtgtgtttggaagaagtaattgagaaattttaaagaatttaaaattctaagcaattta 41139960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 302 - 356
Target Start/End: Complemental strand, 42776725 - 42776671
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacat 356  Q
    ||||||||||||||||||||||| ||||||||| ||||  |||||||||||||||    
T  42776725 catccaaacaatgaaattcacctaaaagtatttgaatttactcaaaacattacat 42776671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 857323 - 857266
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||||||    
T  857323 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 857266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 15660258 - 15660315
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||| ||||||||| || ||||||||||||||||||||||||||||    
T  15660258 caaacaatagaattcagctcaaagtagttgaattccctcaaaacattacattccctca 15660315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 26534580 - 26534523
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    |||||||||||  |||||||  |||||||||| |||||||||||||||||||||||||    
T  26534580 atccaaacaatagaattcacaacaaagtatttgaattccctcaaaacattacattccc 26534523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 41139560 - 41139500
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||  ||||||||| ||||||||| |||| ||||||||||||||||| |||||    
T  41139560 atccaaacaatagaattcacctaaaagtatttgaatttcctcaaaacattacattacctca 41139500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 857324 - 857371
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||    
T  857324 aattcaactcaaagtagttgaattccctcaaaacattacattccctca 857371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 358
Target Start/End: Original strand, 16300209 - 16300260
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 358  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||||||||||    
T  16300209 aaacaatggaattcacctcaaagtatttgaattttctcaaaacattacattc 16300260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 304 - 363
Target Start/End: Original strand, 46242531 - 46242590
Alignment:
Q  304 tccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||| |||||||||||||||||||  ||||| ||||||||||| ||| |||||    
T  46242531 tccaaacaatggaattcacctcaaagtattttgattccttcaaaacattatatttcctca 46242590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 49111397 - 49111444
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||    
T  49111397 aattcacctcaaaatagttgaattccctcaaaacattacattccctca 49111444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 229
Target Start/End: Original strand, 5579654 - 5579700
Alignment:
Q  183 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattc 229  Q
    ||||||||| ||||||||||| ||||||||| |||||||||||||||    
T  5579654 gtgtgtttgaatgaggtaattagaaaattttgaagaatttaaaattc 5579700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 363
Target Start/End: Complemental strand, 11041040 - 11040994
Alignment:
Q  317 attcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||| || ||||| ||||||||||||||||||||||    
T  11041040 attcacctcaaagtagttgaattctctcaaaacattacattccctca 11040994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 27284651 - 27284697
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||||    
T  27284651 caaacaatgaaattcacctcaaagtatttgaattctcttaaaacatt 27284697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 28751742 - 28751804
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||| |||||   |||||||||| |||||| |||| |||||||||||    
T  28751742 ttagagtgtgtttggatgagataattgagaaattttaaaaaatttagaattataggcaattta 28751804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 10128049 - 10128106
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||| ||||||||| || ||||||||||||||||||||||| ||||    
T  10128049 caaacaatagaattcatctcaaagtagttgaattccctcaaaacattacattctctca 10128106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 10633099 - 10633058
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  10633099 ctcaaagtatttgaattccctcataacattacattccctcaa 10633058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 28845955 - 28845898
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || ||||||||| ||||||||||||||||||    
T  28845955 caaacaatagaattcaccttaaagtagttgaattccctcgaaacattacattccctca 28845898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 31473916 - 31473875
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  31473916 ctcaaagtatttgaattccctcataacattacattccctcaa 31473875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 36455991 - 36455934
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || |||||||||||||||||| |||||||||    
T  36455991 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattagattccctca 36455934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 40548204 - 40548253
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| |||||||| |||||||||| |||| ||||||||||||    
T  40548204 atccaaacaatggaattcaccccaaagtatttgaatttcctcaaaacatt 40548253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 42844627 - 42844570
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||||| || |||||| |||||| ||||||||||||||    
T  42844627 caaacaatagaattcacctcaaagtagttgaattccttcaaaatattacattccctca 42844570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 1112680 - 1112632
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||| || ||||||||| |||||||||||| |||||    
T  1112680 aaattcacctcaaagtagttgaattccctcgaaacattacatttcctca 1112632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 232
Target Start/End: Original strand, 16299781 - 16299829
Alignment:
Q  184 tgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctag 232  Q
    |||||||| ||||||||||| |||||| ||| |||||||||||||||||    
T  16299781 tgtgtttgaatgaggtaattggaaaatattagagaatttaaaattctag 16299829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 24705880 - 24705820
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||||| |||||||  |||||||| ||||||||| |||| |||| ||||    
T  24705880 ttagagtgtgtttggatggggtaattgaaaaattttgaagaatttagaattttagggaatt 24705820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 41498574 - 41498622
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||| || || |||||| |||||||||||||||||||||    
T  41498574 aaattcacctcaaaataattgaattccttcaaaacattacattccctca 41498622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Complemental strand, 54566724 - 54566664
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||||| |||||||   ||||||||| ||||||||||||| ||| ||||    
T  54566724 ttagagtgtgtttggatggggtaattgagaaattttaatgaatttaaaattcaagggaatt 54566664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 324 - 363
Target Start/End: Original strand, 7352905 - 7352944
Alignment:
Q  324 tcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  7352905 tcaaagtagttgaattccctcaaaacattacattccctca 7352944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 28845956 - 28846003
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| ||||||||| || |||||||||||||||||| |||||||||    
T  28845956 aattcaactcaaagtagttgaattccctcaaaacattatattccctca 28846003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 52494012 - 52493958
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    ||||||||||| ||||||||||| ||| ||||| ||||||||| ||||||||||||    
T  52494012 catccaaacaacgaaattcacctaaaaatattttaattccctc-aaacattacatt 52493958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 56118170 - 56118229
Alignment:
Q  181 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||   |||||||| |||| | | ||||||||||||||||    
T  56118170 gagtgtgtttggatgaggtaattgacaaattttagagaactcagaattctaggcaattta 56118229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 16516716 - 16516666
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattct 230  Q
    ||||||||||||||||||||||||   ||||||| ||||||||| ||||||    
T  16516716 agagtgtgtttggatgaggtaattgagaaattttgaagaatttagaattct 16516666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 361
Target Start/End: Complemental strand, 1107126 - 1107081
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccct 361  Q
    |||||| ||||||||| || |||||| |||||||||||||||||||    
T  1107126 aattcatctcaaagtagttgaattccttcaaaacattacattccct 1107081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 1107127 - 1107184
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| | |||| || |||||||||||||||||| |||||||||    
T  1107127 caaacaatagaattcaccttagagtagttgaattccctcaaaacattatattccctca 1107184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 1112707 - 1112748
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    |||||||||||||||| || ||||||||| ||||||||||||    
T  1112707 aattcacctcaaagtagttgaattccctcgaaacattacatt 1112748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 1539708 - 1539667
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    ||||||||||||||||||||||| |||||| |||| ||||||    
T  1539708 ctcaaagtatttgaattccctcaaaacattacattccctcaa 1539667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 7352896 - 7352839
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| ||| || || |||||| |||||||||||||||||||||    
T  7352896 caaacaatagaattcaccttaaaatagttgaattccatcaaaacattacattccctca 7352839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 207 - 240
Target Start/End: Complemental strand, 26535009 - 26534976
Alignment:
Q  207 aaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||| ||||||||||||||||    
T  26535009 aaattttaaagaatttagaattctaggcaattta 26534976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 52295031 - 52295080
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||||||||||  |||||| ||||| ||||||||| |||||||    
T  52295031 atccaaacaatgaaattcgtctcaaaatatttgaattccctcgaaacatt 52295080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 53760776 - 53760825
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||  ||||||| ||||| ||||| |||||||||||||||||    
T  53760776 atccaaacaatagaattcacatcaaaatatttgaattccctcaaaacatt 53760825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 321 - 361
Target Start/End: Original strand, 11348327 - 11348367
Alignment:
Q  321 acctcaaagtatttaaattccctcaaaacattacattccct 361  Q
    ||||||||||  || ||||||||||||||||||||||||||    
T  11348327 acctcaaagttgttgaattccctcaaaacattacattccct 11348367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 352
Target Start/End: Original strand, 26250994 - 26251030
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||| || |||||||||||||||||    
T  26250994 aattcacctcaaagtagttgaattccctcaaaacatt 26251030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 153; Significance: 5e-81; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 175 - 363
Target Start/End: Complemental strand, 19476031 - 19475843
Alignment:
Q  175 cctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgca 274  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  19476031 ccttaagagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcataacattaca 19475932  T
Q  275 tttcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  19475931 tttcctcaacattacattacattctcccatccaaacaatggaattcacctcaaagtatttgaattacctcataacattacattccctca 19475843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 180 - 357
Target Start/End: Complemental strand, 8762336 - 8762159
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |    
T  8762336 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattacattttc 8762237  T
Q  280 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    ||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||| |||||||||| |||||||||||    
T  8762236 tcaacattacattacattctcccatccaaacaatggaattcacatcaaagtatttgaattccctcataacattacatt 8762159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 54761424 - 54761598
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 277  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||  | |||||||||||||||| |||||||||| |||||    
T  54761424 ttagagtgtgtttggatgaggtaatttgaaaattttacagaatttaaaattttagacaatttactttaaagtatttgaattccttcataacattacattt 54761523  T
Q  278 cctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||| |||||||||||||||| ||||||||||||| |||| || ||||||||||| |||||||||||||||||    
T  54761524 cctcaatattacattacattccctcatccaaacaatggaatttacatcaaagtatttgaattccctcaaaacatt 54761598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 177 - 308
Target Start/End: Original strand, 33871761 - 33871892
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatt 276  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||   ||    
T  33871761 tttagagtgtgtgtggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcgtaacattatgtt 33871860  T
Q  277 tcctcaacattacattacattcccccatccaa 308  Q
    ||||||||||||||||||||||||||||||||    
T  33871861 tcctcaacattacattacattcccccatccaa 33871892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 178 - 352
Target Start/End: Complemental strand, 47714488 - 47714307
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 277  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||  ||||||||||||||| |||||||||| |||||    
T  47714488 ttagagtgtgtttggatgaggtaatttggaaattttaaagaatttcaaattctaggcaatttacct--aagtatttgaattccttcataacattacattt 47714391  T
Q  278 cctca--------acattacattacattcccccatccaaacaatgaaattcacctc-aaagtatttaaattccctcaaaacatt 352  Q
    |||||        | |||||||||||||||| ||||||||||||||||||||| || ||||||||| |||||||||||||||||    
T  47714390 cctcaatattagtatattacattacattccctcatccaaacaatgaaattcacatcaaaagtatttgaattccctcaaaacatt 47714307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 42005940 - 42005998
Alignment:
Q  305 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  42005940 ccaaacaatgaaattcacctcaaggtatttaaattccttcaaaacattacattccctca 42005998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 360
Target Start/End: Original strand, 21307517 - 21307574
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  21307517 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccc 21307574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 34396148 - 34396204
Alignment:
Q  184 tgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  34396148 tgtgtttggatgaggtaattggaaaattttaaagagtttaaaattctaggcaattta 34396204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 240
Target Start/End: Complemental strand, 7977107 - 7977040
Alignment:
Q  173 ttcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||  ||| ||||||||||||    
T  7977107 ttcctttagagtgtgtttggatgaggtaattgggaaattttaaagaatttcgaatcctaggcaattta 7977040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 28181800 - 28181858
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||    
T  28181800 agtgtgtttggacgaggtaattggaaaattttaaagaatttagaattctaggcaattta 28181858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 30766640 - 30766580
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||||    
T  30766640 atccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctca 30766580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 305 - 361
Target Start/End: Complemental strand, 37054479 - 37054423
Alignment:
Q  305 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccct 361  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||    
T  37054479 ccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccct 37054423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 47767519 - 47767459
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||||    
T  47767519 atccaaacaatgtaattcacctcaaggtatttgaattccttcaaaacattacattccctca 47767459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 48948131 - 48948071
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||| ||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  48948131 agagtatgtttggatgaggtaattgaaaaattttaaagaatttagaattctaggcaattta 48948071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 53470414 - 53470474
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| || |||||||||    
T  53470414 atccaaacaatgaaattcaccccaaagtatttgaattccctcaaaacaatagattccctca 53470474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 21731471 - 21731408
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||||||   |||||| | |||||||||||||||||||||||||    
T  21731471 tttagagtgtgtttggatgaggtaattgataaatttaagagaatttaaaattctaggcaattta 21731408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 176 - 231
Target Start/End: Complemental strand, 52527563 - 52527508
Alignment:
Q  176 ctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattcta 231  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||    
T  52527563 ctttagagtgtgtttggatgaggtaattggaaaattttaaaaaatttagaattcta 52527508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 53129828 - 53129887
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctc 362  Q
    |||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||||||    
T  53129828 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacattacattccctc 53129887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 34089127 - 34089065
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||| ||||||   ||||||||||||||||| ||||||||||||||||    
T  34089127 ttagagtgtgtttggatgatgtaattgagaaattttaaagaatttagaattctaggcaattta 34089065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 38506482 - 38506544
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||| |||| |||||||||||    
T  38506482 ttagagtgtgtttgaatgaagtaattggaaaattttaaagaatttagaattttaggcaattta 38506544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 31070490 - 31070433
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||    
T  31070490 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctca 31070433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 48824637 - 48824694
Alignment:
Q  183 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||| |||||||| ||||||||||||||||||| |||| |||||||||||    
T  48824637 gtgtgtttggataaggtaattggaaaattttaaagaatttagaattttaggcaattta 48824694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 7976635 - 7976579
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 359  Q
    |||||||||||  |||||||||||| ||||||||||||| |||||||||||||||||    
T  7976635 atccaaacaatagaattcacctcaatgtatttaaattccttcaaaacattacattcc 7976579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 34088658 - 34088598
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||| ||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  34088658 atcctaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctca 34088598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 36397511 - 36397571
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||    
T  36397511 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctagacaattta 36397571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 36397974 - 36398034
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||| ||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  36397974 atccgaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctca 36398034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 48947692 - 48947632
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| ||||| ||||||||| ||||||||||||    
T  48947692 atccaaacaatggaattcaccccaaagtatttgaattctctcaaaacaatacattccctca 48947632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 53469951 - 53470011
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  53469951 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggtaattta 53470011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 9129429 - 9129476
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  9129429 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 9129476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 9137536 - 9137583
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  9137536 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 9137583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 27251979 - 27252026
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  27251979 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 27252026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 241
Target Start/End: Complemental strand, 28092206 - 28092152
Alignment:
Q  186 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttat 241  Q
    |||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  28092206 tgtttggatgagctaattggaaaattttaaagaattt-aaattctaggcaatttat 28092152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 35279467 - 35279530
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||| |||| | ||||||||||||||||| ||||||| | ||||||    
T  35279467 tttagagtgtgtttggatgaggcaattgggaaattttaaagaatttagaattctaagtaattta 35279530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 44692907 - 44692954
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  44692907 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 44692954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 46672801 - 46672848
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  46672801 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 46672848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 671186 - 671248
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||   |||||||||||||| ||||||| ||| |||||||    
T  671186 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatataaaattatagacaattta 671248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 671606 - 671664
Alignment:
Q  305 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||| |||||||| |||||||| | ||||||||||||||| ||||||||||||    
T  671606 ccaaacaatggaattcaccccaaagtatctgaattccctcaaaacaatacattccctca 671664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 43863484 - 43863546
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||| |||||||||   ||||||||||||||||| ||||||||| ||||||    
T  43863484 ttagagtgtgtttggacgaggtaattgagaaattttaaagaatttagaattctaggtaattta 43863546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 228
Target Start/End: Original strand, 21307110 - 21307159
Alignment:
Q  179 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 228  Q
    ||||||||||||||||||||||||| | ||||||||||||||||| ||||    
T  21307110 tagagtgtgtttggatgaggtaattgggaaattttaaagaatttagaatt 21307159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 7302433 - 7302373
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||||||| |||| | |||||| |||||||||||||||| ||||    
T  7302433 atccaaacaatggaattcacctcaaggtatctgaattccttcaaaacattacattctctca 7302373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 24241711 - 24241771
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||| |||| |||||||    
T  24241711 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaatcctagacaattta 24241771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 186 - 229
Target Start/End: Original strand, 645741 - 645784
Alignment:
Q  186 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattc 229  Q
    |||||||||||||||||| ||||||||||||||||||| |||||    
T  645741 tgtttggatgaggtaattggaaaattttaaagaatttagaattc 645784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 46706739 - 46706681
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtattta--aattccctcaaaacattacattcc 359  Q
    |||||||||||| ||||||||||||||||||||  ||||| ||| ||||||||||||||    
T  46706739 atccaaacaatggaattcacctcaaagtatttaagaattctctcgaaacattacattcc 46706681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 31189384 - 31189442
Alignment:
Q  305 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| || ||||| |||||||||||||| ||||| |||||||||||||||| |||||    
T  31189384 ccaaacgataaaatttacctcaaagtatttgaattctctcaaaacattacattacctca 31189442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 38506864 - 38506910
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||||||    
T  38506864 caaacaatggaattcacctcaaattatttgaattccctcaaaacatt 38506910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 9007440 - 9007489
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||||||||| ||||||||| |||||  ||||||||||    
T  9007440 atccaaacaatgaaattcacctaaaagtatttgaattcgttcaaaacatt 9007489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 304 - 345
Target Start/End: Original strand, 28182234 - 28182275
Alignment:
Q  304 tccaaacaatgaaattcacctcaaagtatttaaattccctca 345  Q
    |||||||||| |||||||||||||||||||| ||||||||||    
T  28182234 tccaaacaataaaattcacctcaaagtatttgaattccctca 28182275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 363
Target Start/End: Original strand, 34396491 - 34396552
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||| ||||||||| |||||||||||||| ||||||||   || ||||||||||||||    
T  34396491 catccaaagaatgaaatttacctcaaagtatttgaattcccttgtaatattacattccctca 34396552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 357
Target Start/End: Original strand, 44436343 - 44436384
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    |||||||||||||||| || ||||||||||||||||||||||    
T  44436343 aattcacctcaaagtagttgaattccctcaaaacattacatt 44436384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 5415854 - 5415810
Alignment:
Q  319 tcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| |||||| || ||||||||||||||||||||||||||||    
T  5415854 tcaccttaaagtagttgaattccctcaaaacattacattccctca 5415810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 240
Target Start/End: Complemental strand, 19475776 - 19475736
Alignment:
Q  200 aatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||| |||||||||||||||||||||||||||| |||||    
T  19475776 aatttggaaattttaaagaatttaaaattctaggctattta 19475736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 50168191 - 50168251
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||  | |||||| |||||||||    
T  50168191 agagtgtgtttggatgaggtaattgagaaattttaaagaatcgagaattcttggcaattta 50168251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 2105282 - 2105219
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||  ||||||   ||||||| ||||||||| ||||||||| ||||||    
T  2105282 tttagagtgtgtttggatggagtaattgagaaattttgaagaatttataattctaggtaattta 2105219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 28092288 - 28092241
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || |||||||||||||||| ||||| |||||    
T  28092288 aattcacctcaaagtaattgaattccctcaaaacatcacatttcctca 28092241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 47336969 - 47336914
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    ||||||||||||| ||||||||| ||  ||||||||||  ||||||||||||||||    
T  47336969 catccaaacaatggaattcacctaaacatatttaaattatctcaaaacattacatt 47336914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 49457417 - 49457370
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||| |||||  || ||||||||||||||||||||||||||||    
T  49457417 aattcaccttaaagtggttgaattccctcaaaacattacattccctca 49457370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 356
Target Start/End: Original strand, 13176546 - 13176600
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacat 356  Q
    ||||||||||||  ||| ||||| ||||| ||| |||||||||||||||||||||    
T  13176546 catccaaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 13176600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 356
Target Start/End: Complemental strand, 21730985 - 21730936
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacat 356  Q
    |||||||||||||||| |||||| ||||| |||||| ||||||||||||||    
T  21730985 caaacaatgaaattcatctcaaa-tatttgaattccttcaaaacattacat 21730936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 2104821 - 2104772
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||  ||||||| ||||||||||| ||||||||| |||||||    
T  2104821 atccaaacaatagaattcacatcaaagtatttgaattccctcgaaacatt 2104772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 5415858 - 5415915
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || |||||| |||||||||||| ||||||||    
T  5415858 caaacaatagaattcaccttaaagtagttgaattccatcaaaacattactttccctca 5415915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 9129428 - 9129371
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||| || |||||| || |||||| |||||||||||||||||||||    
T  9129428 caaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctca 9129371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 9137535 - 9137478
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||| || |||||| || |||||| |||||||||||||||||||||    
T  9137535 caaacaatagaattcaacttaaagtagttgaattccatcaaaacattacattccctca 9137478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 19475883 - 19475842
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    ||||||||||||||||| |||||||||||| |||| ||||||    
T  19475883 ctcaaagtatttgaattacctcataacattacattccctcaa 19475842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 26323443 - 26323394
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||| | ||||||||| ||||||||| |||| ||||||||||||    
T  26323443 atccaaacaacggaattcacctaaaagtatttgaattacctcaaaacatt 26323394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 44436342 - 44436285
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| ||| || || |||| |||||||||||||||||||||||    
T  44436342 caaacaatagaattcaccttaaaatagttgaatttcctcaaaacattacattccctca 44436285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 44692906 - 44692849
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||  || ||||||||||||||||||| ||||||||    
T  44692906 caaacaatagaattcaccttaaagtggttgaattccctcaaaacattactttccctca 44692849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 352
Target Start/End: Complemental strand, 332048 - 332012
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||| || |||||||||||||||||    
T  332048 aattcacctcaaagtagttgaattccctcaaaacatt 332012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 31189395 - 31189443
Alignment:
Q  235 aatttatctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||| |||||||||||||||||| |||| |||||| |||| ||||||    
T  31189395 aatttacctcaaagtatttgaattctctcaaaacattacattacctcaa 31189443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 360
Target Start/End: Original strand, 42130777 - 42130821
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    |||||||||||||||| || |||||||| |||| |||||||||||    
T  42130777 aattcacctcaaagtaattgaattccctaaaaagattacattccc 42130821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 347
Target Start/End: Original strand, 43863936 - 43863979
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaa 347  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||    
T  43863936 atccaaacaatggaattcacc-caaagtatttgaattccctcaaa 43863979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 50168595 - 50168655
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||| || ||| ||||| | || ||||||||||||||||| |||||    
T  50168595 atccaaacaatggaattcagctaaaattatttgagtttcctcaaaacattacattacctca 50168655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 152; Significance: 2e-80; HSPs: 76)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 180 - 363
Target Start/End: Original strand, 26161987 - 26162169
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 279  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||    
T  26161987 agagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatt-atctcaaagtatttgaattccctcataacattacatttcc 26162085  T
Q  280 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  26162086 ttaacattacattacattcccccatccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctca 26162169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 173 - 361
Target Start/End: Original strand, 29639056 - 29639245
Alignment:
Q  173 ttcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaattta-aaattctaggcaatttatctcaaagtatttgaattccctcataacatt 271  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||| |||||||||||    
T  29639056 ttcccttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttttaaattctaggcaatttacctcaaagtatttgaattctctcataacatt 29639155  T
Q  272 gcatttcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccct 361  Q
     |||||||||||||||||||||||||| | ||||||||||||| ||||||||||||| ||||| |||| ||||| |||||||||||||||    
T  29639156 acatttcctcaacattacattacattctcacatccaaacaatggaattcacctcaaaatatttgaatttcctcataacattacattccct 29639245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 180 - 363
Target Start/End: Original strand, 6498614 - 6498797
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 279  Q
    |||||||||||||||||||||||||| ||||||||||   ||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||    
T  6498614 agagtgtgtttggatgaggtaatttggaaattttaaattctttaaaattctaggcaatttacctcaaagtatttgaattccttcataacattacatttcc 6498713  T
Q  280 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||| |||||||||||||||| |||||||||||||  |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  6498714 tcaatattacattacattcccacatccaaacaatggtattcacatcaaagtatttgaattccctcaaaacattacattccctca 6498797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 181 - 363
Target Start/End: Complemental strand, 31632928 - 31632749
Alignment:
Q  181 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcct 280  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||    
T  31632928 gagtgtgtttggataaggtaatttgaaaattt--aagaatttaaaattctagacaatttacctcaaagtatttgaattccctcataacattacatttcct 31632831  T
Q  281 caacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  31632830 caacattacattacatt-ccccattcaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctca 31632749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 280 - 363
Target Start/End: Original strand, 35776904 - 35776987
Alignment:
Q  280 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||||| |||||||| |||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  35776904 tcaacattacattacattccctcatccaaataatggaattcacctcaaagtatttgaattccctcataacattacattccctca 35776987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 22391559 - 22391619
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  22391559 atccaaacaatgaaattcacctcaaaatatttaaattctctcaaaacattacattccctca 22391619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 14602769 - 14602831
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  14602769 ttagagtgtgtttggatgaggtaattgaaaaattttaaagaatttagaattctaggcaattta 14602831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 14790617 - 14790557
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||    
T  14790617 agagtgtgtttggatgaggtaattggaaaattttaaagaatttagaatcctaggcaattta 14790557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 43791177 - 43791117
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| | ||||||||||||||||| ||||||||||||||||||||||||||||    
T  43791177 atccaaacaatggagttcacctcaaagtatttgaattccctcaaaacattacattccctca 43791117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 43791571 - 43791511
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||    
T  43791571 agagtgtgtttggatgaggtaattggaaaattttaaagaatttagaattcttggcaattta 43791511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 39342158 - 39342220
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  39342158 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 39342220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 302 - 363
Target Start/End: Original strand, 25189197 - 25189258
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||| |||||    
T  25189197 catccaaacaatgaaattcacttcaaagtatttgaattccctcaaaacattgcattacctca 25189258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 175 - 240
Target Start/End: Complemental strand, 35456359 - 35456294
Alignment:
Q  175 cctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||| ||||||||||||||||||||||||  ||| |||||||||||||| ||||||||||||||||    
T  35456359 ccttaagagtgtgtttggatgaggtaattgaaaatttttaaagaatttagaattctaggcaattta 35456294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 23455219 - 23455279
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  23455219 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctca 23455279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 28539140 - 28539200
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  28539140 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctca 28539200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 30524342 - 30524286
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 359  Q
    ||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||    
T  30524342 atccaaacaatgaaattcatcccaaagtatttgaattccctcaaaacattacattcc 30524286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 30629144 - 30629084
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||||| |||||||||||||||| || |||||| ||||||||||||    
T  30629144 atccaaacaatgaaattcaccccaaagtatttaaattctcttaaaacaatacattccctca 30629084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 38320825 - 38320770
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  38320825 agtgtgtttggatgtggtaatt-gaaaattttaaagaatttaaaattctaggcaatt 38320770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 2411863 - 2411801
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||| |||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  2411863 ttagagagtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 2411801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 40496270 - 40496208
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||| ||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  40496270 ttagagtatgtttggatgaggtaattaagaaattttaaagaatttataattctaggcaattta 40496208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 5644761 - 5644704
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||    
T  5644761 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctca 5644704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 29065903 - 29065846
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||    
T  29065903 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctca 29065846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 32650660 - 32650611
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  32650660 atccaaacaataaaattcacctcaaagtatttgaattccctcaaaacatt 32650611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 40667428 - 40667379
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  40667428 atccaaacaatgaaattcatcccaaagtatttaaattccctcaaaacatt 40667379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 9784903 - 9784963
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| | |||||| |||||||||| ||||||||||||||| ||||||||||||    
T  9784903 atccaaacaatggatttcaccccaaagtatttgaattccctcaaaacaatacattccctca 9784963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 23548119 - 23548179
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  23548119 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggaaattta 23548179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 23548583 - 23548643
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| |||| |||||||||| ||||||||||||    
T  23548583 atccaaacaatggaattcaccccaaagtatttgaatttcctcaaaacaatacattccctca 23548643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 28538677 - 28538737
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||| |||||||||||    
T  28538677 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattttaggcaattta 28538737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 36328328 - 36328388
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   |||||||||| |||||| ||||||||||||||||    
T  36328328 agagtgtgtttggatgaggtaattgagaaattttaaaaaatttagaattctaggcaattta 36328388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 39342614 - 39342674
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  39342614 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 39342674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 42817072 - 42817012
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||| |||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  42817072 agagtgtgttaggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 42817012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 30587427 - 30587490
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||| ||| |||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||    
T  30587427 tttatagtatgtttggacgaggtaattggaaaattttagagaatttagaattctaggcaattta 30587490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 30080772 - 30080822
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||||||||    
T  30080772 catccaaacaatggaattcacctgaaagtatttaaatttcctcaaaacatt 30080822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 37460470 - 37460528
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||| ||||||||||||||||  ||| ||||||||||||||||||||||| |||||    
T  37460470 agagtgtatttggatgaggtaattgaaaatttttaaagaatttaaaattctagacaatt 37460528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 362
Target Start/End: Original strand, 40110823 - 40110869
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctc 362  Q
    |||||||||||||||| || |||||||||||||||||||||||||||    
T  40110823 aattcacctcaaagtagttgaattccctcaaaacattacattccctc 40110869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 45181757 - 45181814
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||||||||| |||||||||||| ||| |||| ||||||||||||||    
T  45181757 agagtgtgtttggatgaggtaa-ttgaaaattttagagagtttagaattctaggcaatt 45181814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 306 - 360
Target Start/End: Complemental strand, 46069475 - 46069421
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||||||||||    
T  46069475 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccc 46069421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 14790200 - 14790151
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||||||||    
T  14790200 atccaaataataaaattcacctcaaagtatttgaattccctcaaaacatt 14790151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Original strand, 19865530 - 19865575
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  19865530 aaacaatgaaattcacctcaaagtatttgaatttcctcaaaacatt 19865575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 21635960 - 21636017
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  21635960 caaacaatagaattcatctcaaagtagttaaattccttcaaaacattacattccctca 21636017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 14603234 - 14603294
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||| ||| |||||||||| |||||||| |||||| ||||||||||||    
T  14603234 atccaaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctca 14603294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 18789218 - 18789278
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||||| ||||||||| |||||||||| ||||||| |||| ||||    
T  18789218 atccaaacaatggaattcaccttaaagtatttgaattccctcataacattatattctctca 18789278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 18789600 - 18789544
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||| ||||||||||||||||||| |||||||||  |||||||||||| ||||    
T  18789600 aaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattctctca 18789544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 35455891 - 35455831
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||| ||| |||||||||| |||||||| |||||| ||||||||||||    
T  35455891 atccaaacaatggaatttaccccaaagtatttgaattcccttaaaacaatacattccctca 35455831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 35488761 - 35488714
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 228  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  35488761 agagtgtgtttggatgatgtaatt-gaaaattttaaagaatttaaaatt 35488714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 40110820 - 40110764
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||  ||||||||| |||||| || ||||||||||||||||||||||||||||    
T  40110820 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 40110764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 45984883 - 45984823
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||| ||||||    ||||||||||||||||| ||||||||||||||||    
T  45984883 agagtgtgtttggatggggtaatagagaaattttaaagaatttagaattctaggcaattta 45984823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 45989243 - 45989183
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||| ||||||    ||||||||||||||||| ||||||||||||||||    
T  45989243 agagtgtgtttggatggggtaatagagaaattttaaagaatttagaattctaggcaattta 45989183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 2057470 - 2057527
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||| ||||||||||  ||||| || ||||||||||||||||||| ||||||||    
T  2057470 caaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctca 2057527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 13814966 - 13815015
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||| |||| ||||||| ||||||||||| |||||||||||||||||    
T  13814966 atccaaataatggaattcacatcaaagtatttgaattccctcaaaacatt 13815015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 15990979 - 15990918
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||| |||| | |||||||||||| |||||| |||| |||||||||| |||||    
T  15990979 catccaaacaatgcaatttatctcaaagtatttgaattccttcaagacattacattacctca 15990918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 26162129 - 26162170
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  26162129 ctcaaagtatttgaattccctcataacattacattccctcaa 26162170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 30587875 - 30587924
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||| | ||||||||| |||||||||||||||||    
T  30587875 atccaaacaatggaattcacattaaagtatttgaattccctcaaaacatt 30587924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 31632789 - 31632748
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  31632789 ctcaaagtatttgaattccctcataacattacattccctcaa 31632748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 35776947 - 35776988
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  35776947 ctcaaagtatttgaattccctcataacattacattccctcaa 35776988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 40495804 - 40495755
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| |||||||| |||| ||||| |||||||||||||||||    
T  40495804 atccaaacaatggaattcaccccaaaatatttgaattccctcaaaacatt 40495755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 45984427 - 45984378
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||  ||||||||||||||||||| |||||||| ||||||||    
T  45984427 atccaaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45984378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 45988787 - 45988738
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||  ||||||||||||||||||| |||||||| ||||||||    
T  45988787 atccaaacaattgaattcacctcaaagtatttgaattcccttaaaacatt 45988738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 49052860 - 49052913
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 359  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||    
T  49052860 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 49052913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 2057466 - 2057422
Alignment:
Q  319 tcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||| || ||||||||||||||||||||||| ||||    
T  2057466 tcacctcaaagtagttgaattccctcaaaacattacattcgctca 2057422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 25189219 - 25189259
Alignment:
Q  243 tcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||| ||||||||||| ||||||    
T  25189219 tcaaagtatttgaattccctcaaaacattgcattacctcaa 25189259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 32651073 - 32651013
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||| ||||||||||||||||| | |||| |||||||||| | ||| ||||||||||||    
T  32651073 agagtgagtttggatgaggtaattgggaaatcttaaagaattcagaatcctaggcaattta 32651013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 34388353 - 34388397
Alignment:
Q  319 tcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||| || ||||||||||||| ||||||||||||||    
T  34388353 tcacctcaaagtagttgaattccctcaaaatattacattccctca 34388397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 40495750 - 40495691
Alignment:
Q  179 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||||||||||||   ||||||| ||||||||| |||| |||| ||||    
T  40495750 tagagtgtgtttggatgaggtaattgagaaattttgaagaatttagaattatagggaatt 40495691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 303 - 342
Target Start/End: Complemental strand, 42816636 - 42816597
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccc 342  Q
    |||||||||||| |||||||| ||||||||||||||||||    
T  42816636 atccaaacaatggaattcaccccaaagtatttaaattccc 42816597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 43955591 - 43955544
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| || |||||| || ||||||||||||||||||||||||||||    
T  43955591 aattcatcttaaagtagttgaattccctcaaaacattacattccctca 43955544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 363
Target Start/End: Original strand, 43955603 - 43955646
Alignment:
Q  320 cacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||| |||||| || ||||||||||||||||||||||||||||    
T  43955603 caccttaaagtagttgaattccctcaaaacattacattccctca 43955646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 44915269 - 44915222
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || |||||| |||||||||||| ||||||||    
T  44915269 aattcacctcaaagtagttgaattccttcaaaacattacgttccctca 44915222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 1580439 - 1580381
Alignment:
Q  180 agagtgtgt-ttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaat 237  Q
    ||||||||| |||||||||||||||  ||  ||||||||||||||||||| ||||||||    
T  1580439 agagtgtgtgttggatgaggtaattgaaattttttaaagaatttaaaattttaggcaat 1580381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 353
Target Start/End: Original strand, 3905631 - 3905681
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatta 353  Q
    |||||||||||  ||||||||||||||||||| |||||| | |||||||||    
T  3905631 atccaaacaatagaattcacctcaaagtatttgaattccttgaaaacatta 3905681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 15990967 - 15990917
Alignment:
Q  233 gcaatttatctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||| |||  ||||| |||| ||||||    
T  15990967 gcaatttatctcaaagtatttgaattccttcaagacattacattacctcaa 15990917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 284
Target Start/End: Complemental strand, 43791157 - 43791115
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaac 284  Q
    ||||||||||||||||||||||| |||||| |||| |||||||    
T  43791157 ctcaaagtatttgaattccctcaaaacattacattccctcaac 43791115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 340
Target Start/End: Complemental strand, 26416040 - 26416003
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattc 340  Q
    |||||||| ||||||||||||||||||||||| |||||    
T  26416040 atccaaaccatgaaattcacctcaaagtatttgaattc 26416003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 26416469 - 26416413
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaat 237  Q
    |||||||||||| |||||||||||   ||||||| ||||||||| |||||||||||||    
T  26416469 agagtgtgtttg-atgaggtaattgagaaattttgaagaatttagaattctaggcaat 26416413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 6498758 - 6498798
Alignment:
Q  243 tcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||| |||||| |||| ||||||    
T  6498758 tcaaagtatttgaattccctcaaaacattacattccctcaa 6498798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 184 - 240
Target Start/End: Original strand, 30080312 - 30080368
Alignment:
Q  184 tgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||| ||||||||||||   ||||||| ||||||||| ||||||| ||||||||    
T  30080312 tgtgttttgatgaggtaattgagaaattttgaagaatttagaattctaagcaattta 30080368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 151; Significance: 8e-80; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 173 - 363
Target Start/End: Complemental strand, 10480336 - 10480146
Alignment:
Q  173 ttcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattg 272  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||     
T  10480336 ttcctttagagtgtgcttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattctctcatagcatta 10480237  T
Q  273 catttcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||  |||||||||||||||||    
T  10480236 catttcctcaacattacattacattctcccatccaaacaatggaattcacctcaaagtatttgaattccctcgtaacattacattccctca 10480146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 177 - 362
Target Start/End: Original strand, 11532111 - 11532298
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatt 276  Q
    |||||| |||||||||||||| ||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  11532111 tttagaatgtgtttggatgagataatttggaagttttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcataacattacatt 11532210  T
Q  277 tcctcaaca--ttacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctc 362  Q
    |||||||||  ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  11532211 tcctcaacattttacattacattcccccatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctc 11532298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 180 - 363
Target Start/End: Complemental strand, 11794105 - 11793922
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 279  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||| ||||| |    
T  11794105 agagtgtgtttggattaggtaatttgaaaattttaaagaatttaaaattctagacaatttacctcaaagtatttgaattctctcataacattacattttc 11794006  T
Q  280 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  11794005 tcaacattacattacattatcccatccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctca 11793922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 177 - 352
Target Start/End: Complemental strand, 7684657 - 7684482
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatt 276  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| |||||  |||||||||||||||||  |||||||||| ||||    
T  7684657 tttagagtgtgtttggataaggtaatttaaaaattttaaagaatttaaaattttaggccatttacttcaaagtatttgaattctttcataacattacatt 7684558  T
Q  277 tcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||| ||||||||||||||||||||| |||||||| |||||||  |||||||||| ||||||||| |||||||    
T  7684557 tcctcaatattacattacattcccccatctaaacaatggaattcacaccaaagtatttgaattccctccaaacatt 7684482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 7167655 - 7167713
Alignment:
Q  305 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  7167655 ccaaacaatgaaattcacctcaaagtatttgaattccttcaaaacattacattccctca 7167713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 32840178 - 32840227
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32840178 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 32840227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 30698368 - 30698308
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  30698368 atccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctca 30698308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 32839634 - 32839694
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  32839634 atccaaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 769584 - 769521
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  769584 tttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 769521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 1583330 - 1583392
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  1583330 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 1583392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 2925202 - 2925140
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||| ||||||||||||||||    
T  2925202 ttagagtgtgtttggatgaagtaattgggaaattttaaagaatttagaattctaggcaattta 2925140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 33188787 - 33188849
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  33188787 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 33188849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 39630777 - 39630715
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||    
T  39630777 ttagagtgtgtttggatgaggtaattgagaaattttaaaaaatttaaaattctaggcaattta 39630715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 7227998 - 7228058
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||| ||||    
T  7227998 atccaaacaatgaaatttacctcaaggtatttaaattccttcaaaacattacattctctca 7228058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 8736561 - 8736501
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||||  |||||||    
T  8736561 agagtgtatttggatgaggttatttgaaaattttaaagaatttaaaattctacccaattta 8736501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 13017866 - 13017806
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||||||||||||||| |||||||| |||| ||||||||||||||    
T  13017866 atccaaacaatggaattcacctcaaagtatttgaattcccttaaaatattacattccctca 13017806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 35047201 - 35047261
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||| |||||||   ||||||||||||||||||||||||||||||||||    
T  35047201 agagtgtgtttggatggggtaattgagaaattttaaagaatttaaaattctaggcaattta 35047261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 3092798 - 3092735
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  3092798 tttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggaaattta 3092735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 7309434 - 7309496
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||| ||||||||    
T  7309434 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaagcaattta 7309496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 240
Target Start/End: Original strand, 19231011 - 19231076
Alignment:
Q  174 tcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||||||   ||||||||||||| ||| ||||||||||||||||    
T  19231011 tcctttagagtgtgtttggatgaggtaattgagaaattttaaagaa-ttagaattctaggcaattta 19231076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 21504997 - 21504939
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  21504997 agtgtgtttggatgaggtaattgggaaattttaaagaatttagaattctaagcaattta 21504939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 32839188 - 32839246
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||    
T  32839188 agagtgtgtttagatgaggtaattgagaaattttaaagaatttaaaattctaggcaatt 32839246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 1730140 - 1730095
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaa 348  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  1730140 atccaaacaatgaaattcatctcaaagtatttaaattccctcaaaa 1730095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 8736427 - 8736476
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  8736427 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 8736476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 19193746 - 19193803
Alignment:
Q  183 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||| |||||||||||| || |||||||| |||||||||||    
T  19193746 gtgtgtttggatgaggtaattggaaaattttaaaaaaattaaaattttaggcaattta 19193803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 28740684 - 28740623
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||| |||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||    
T  28740684 catctaaacaatggaatttacatcaaagtatttgaattccctcaaaacattacattccctca 28740623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 44256184 - 44256123
Alignment:
Q  179 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||| ||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  44256184 tagagtatgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 44256123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 769123 - 769063
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  769123 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 769063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 1583795 - 1583855
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  1583795 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 1583855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 8735965 - 8736025
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||| | ||||||||||||||||| ||| ||| ||||||||    
T  8735965 agagtgtgtttggatgaggtaattgggaaattttaaagaatttagaatcctaagcaattta 8736025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 11141392 - 11141332
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  11141392 atccaaacaatgtaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 11141332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 13018294 - 13018234
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||| ||||||||||||||||||||| ||||||    
T  13018294 agagtgtgtttggatgaggtaattgagaaattataaagaatttaaaattctaggtaattta 13018234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Complemental strand, 17906199 - 17906143
Alignment:
Q  172 attcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 228  Q
    ||||| ||||||||||||||||||||||||||  |||||| ||||||||||||||||    
T  17906199 attcccttagagtgtgtttggatgaggtaattgaaaaattataaagaatttaaaatt 17906143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 33189243 - 33189303
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  33189243 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 33189303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 45094457 - 45094517
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||| | |||||| ||||||||||||||||||||| |||||||||    
T  45094457 atccaaacaatggaattcactttaaagtagttaaattccctcaaaacattatattccctca 45094517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 11607304 - 11607257
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattac 354  Q
    |||||||| ||||||||||||||||||| |||||||||||||||||||    
T  11607304 aaacaatggaattcacctcaaagtatttgaattccctcaaaacattac 11607257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 11716482 - 11716435
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  11716482 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 11716435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 14365774 - 14365727
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  14365774 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 14365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 11594895 - 11594837
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccct 361  Q
    ||||||||||| ||||||||||||||||||||  ||||| |||||| ||||||||||||    
T  11594895 atccaaacaattaaattcacctcaaagtatttgtattccttcaaaatattacattccct 11594837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 14306364 - 14306422
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||    
T  14306364 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctagacaatt 14306422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 302 - 352
Target Start/End: Complemental strand, 20935794 - 20935744
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  20935794 catccaaacaatggaattcacatcaaagtatttgaattccctcaaaacatt 20935744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 31703919 - 31703981
Alignment:
Q  176 ctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||| ||||||||||| |||||||||| | |||||| |||||||| |||||    
T  31703919 ctttagagtgtgtttgaatgaggtaattggaaaattttagataatttagaattctagtcaatt 31703981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 27033574 - 27033517
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||| ||||    
T  27033574 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattctctca 27033517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 40026148 - 40026091
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||| ||| |||||    
T  40026148 caaacaatagaattcacctcaaagtatttaaatttcctcaaaacattatattacctca 40026091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 41461590 - 41461647
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||||||| || || ||||||||||||||||||||||||||||    
T  41461590 caaacaatagaattcacctcaaaatagttgaattccctcaaaacattacattccctca 41461647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 3092369 - 3092309
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||| ||| |||||||||| |||| |||||||||| ||||||||||||    
T  3092369 atccaaacaatggaatttaccccaaagtatttgaatttcctcaaaacaatacattccctca 3092309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 784867 - 784820
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  784867 aattcaactcaaagtagttaaattccttcaaaacattacattccctca 784820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 11141857 - 11141794
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||| ||||||||||||||||||||||   ||||||||||||||||| ||| |||| |||||||    
T  11141857 tttaaagtgtgtttggatgaggtaattgagaaattttaaagaatttagaatcctagacaattta 11141794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 307 - 354
Target Start/End: Complemental strand, 11595402 - 11595355
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattac 354  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||||||    
T  11595402 aaacaatggaattcacctcaaaatatttgaattccctcaaaacattac 11595355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 14537273 - 14537226
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || |||| |||||||||||||||||||||||    
T  14537273 aattcacctcaaagtagttgaattacctcaaaacattacattccctca 14537226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 19072382 - 19072320
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||| |||||   ||||||||||||||||| ||| ||||| ||||||    
T  19072382 ttagagtgtgtttggatgagataattgagaaattttaaagaatttagaatcctaggtaattta 19072320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 41585192 - 41585254
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||| ||||||||||||||||   ||||||||||||||||| |||||| | |||||||    
T  41585192 ttagagtgtctttggatgaggtaattgataaattttaaagaatttagaattcttgacaattta 41585254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 784868 - 784921
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 359  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||    
T  784868 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattcc 784921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 10244261 - 10244204
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||| ||||||||||  ||||| || ||||||||||||||||||| ||||||||    
T  10244261 caaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctca 10244204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 11793962 - 11793921
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  11793962 ctcaaagtatttgaattccctcataacattacattccctcaa 11793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 41585676 - 41585725
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||| || ||||| ||||||||||| |||||||||||||||||    
T  41585676 atccaaacaataaatttcacttcaaagtatttgaattccctcaaaacatt 41585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 4746677 - 4746766
Alignment:
Q  7 gaaatgaaggggacaagggaatagtaatagaaacaaaggtagttagcaagtatcctaagcctttaaattttatgtgatgtttctaaggaaaccc 100  Q
    ||||||||||||| || |||| |||||||||||||| ||||||| ||    ||||||| ||||| ||  ||| |||| ||||||||||||||||    
T  4746677 gaaatgaaggggaaaacggaagagtaatagaaacaacggtagttggc----atcctaaacctttcaacattacgtgaagtttctaaggaaaccc 4746766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 238
Target Start/End: Original strand, 7611413 - 7611477
Alignment:
Q  174 tcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||| ||||||||||||||  ||||||   ||||||| ||||||||||||||||||| ||||    
T  7611413 tcctttaaagtgtgtttggatggagtaattgagaaattttgaagaatttaaaattctaggtaatt 7611477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 359
Target Start/End: Complemental strand, 11606800 - 11606744
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 359  Q
    ||||||||||| ||||||||||||||||||||  ||||| | |||| ||||||||||    
T  11606800 atccaaacaattaaattcacctcaaagtatttgtattccttgaaaatattacattcc 11606744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 39630311 - 39630252
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||  ||||| ||||||| ||||| ||||||||||||||| ||||||||||||    
T  39630311 atccaaacaatagaattcccctcaaa-tatttgaattccctcaaaacaatacattccctca 39630252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 11532169 - 11532216
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||| |||||||||||||| |||||||||| ||||||||||| |||||    
T  11532169 aatttacctcaaagtatttgaattccctcataacattacatttcctca 11532216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 17180371 - 17180324
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| |||||| || || ||||||||||||||||||||||||||||    
T  17180371 aattcatctcaaaatagttgaattccctcaaaacattacattccctca 17180324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 41461585 - 41461542
Alignment:
Q  320 cacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||| || ||||||||||||||||||||||||| |||||    
T  41461585 cacctcaaaataattaaattccctcaaaacattacattacctca 41461542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 345
Target Start/End: Original strand, 7611874 - 7611916
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctca 345  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||    
T  7611874 atccaaacaatggaattcacatcaaagtatttgaattccctca 7611916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 14365793 - 14365831
Alignment:
Q  325 caaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  14365793 caaagtagttgaattccctcaaaacattacattccctca 14365831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 357
Target Start/End: Original strand, 14954343 - 14954393
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    |||||||  ||||||||| |||||| || ||||||||||||||||||||||    
T  14954343 aaacaatagaattcaccttaaagtagttgaattccctcaaaacattacatt 14954393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 21504534 - 21504488
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||| |||||| |||||| ||||| |||||||||||||||||    
T  21504534 caaacaatggaattcatctcaaaatatttgaattccctcaaaacatt 21504488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 28021706 - 28021756
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattct 230  Q
    |||||||||||||||||| |||||   ||||||||||||||||| ||||||    
T  28021706 agagtgtgtttggatgagctaattgagaaattttaaagaatttagaattct 28021756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 235
Target Start/End: Original strand, 6996371 - 6996420
Alignment:
Q  186 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggca 235  Q
    |||||||||||||||||| |||| |||  ||||||||| |||||||||||    
T  6996371 tgtttggatgaggtaattagaaattttgtaagaatttagaattctaggca 6996420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 10480186 - 10480145
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||| ||||||| |||| ||||||    
T  10480186 ctcaaagtatttgaattccctcgtaacattacattccctcaa 10480145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 12263513 - 12263468
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaa 348  Q
    ||||||||||||||||||| |||||| ||||| ||||| |||||||    
T  12263513 atccaaacaatgaaattcaactcaaaatatttgaattctctcaaaa 12263468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 352
Target Start/End: Original strand, 11684675 - 11684711
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||| || |||||||||||||||||    
T  11684675 aattcacctcaaagtagttgaattccctcaaaacatt 11684711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 17905733 - 17905681
Alignment:
Q  311 aatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||| ||||||||||||| ||||| |||||| | |||||||||||||| ||||    
T  17905733 aatggaattcacctcaaaatatttgaattcctttaaaacattacattctctca 17905681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 28740662 - 28740622
Alignment:
Q  243 tcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||| |||||| |||| ||||||    
T  28740662 tcaaagtatttgaattccctcaaaacattacattccctcaa 28740622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 5e-78; HSPs: 79)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 177 - 360
Target Start/End: Original strand, 47541848 - 47542031
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatt 276  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| ||||    
T  47541848 tttagagtgtgtttggatgaggtaatttagaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccctcgtaatattacatt 47541947  T
Q  277 tcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  47541948 tcctcaacattacattacattcccccattcaaacaatgaaattcacctcaaagtatttaaattctctcataacattacattccc 47542031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 7 - 180
Target Start/End: Original strand, 1389342 - 1389515
Alignment:
Q  7 gaaatgaaggggacaagggaatagtaatagaaacaaaggtagttagcaagtatcctaagcctttaaattttatgtgatgtttctaaggaaaccctactat 106  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  1389342 gaaatgaagggaacaagggaatagtaatagaaacaaaggtagttagcaagcatcctaagcctttaaattttatgtgatgtttctaaggaaaccctactat 1389441  T
Q  107 aatattaataatnnnnnnngagcaaactacacttcatataacaattgaatctgatgatagtaataattccttta 180  Q
    ||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1389442 aatattaataataaaaaaagagcaaactacacttcatataacaattgaatctgatgatagtaataattccttta 1389515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 180 - 363
Target Start/End: Original strand, 24273084 - 24273266
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 279  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||| |||||||    
T  24273084 agagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctacgcaatt-atctcaaagtatttgaattccctcgtaacattacatttcc 24273182  T
Q  280 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  24273183 ttaacattacattacattcccccatccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctca 24273266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 185 - 363
Target Start/End: Original strand, 26500947 - 26501125
Alignment:
Q  185 gtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctcaac 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| ||| |||||| ||||     
T  26500947 gtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggtaatttacctcaaagtatttgaattccttcataatattacatttcatcaat 26501046  T
Q  285 attacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  26501047 attacattacattcccccatccaaacaatggaattcacatcaaagtatttgaattccctcaaaacattacattccctca 26501125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 182 - 363
Target Start/End: Original strand, 47165077 - 47165258
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctc 281  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||| ||||||||||  |||||||     
T  47165077 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattttaggtaatttacctcaaagtatttgaattccttcataacattatatttcctt 47165176  T
Q  282 aacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    || |||||||||||| |||  |||||||||||| ||||||||| ||||||||| |||||||||||||||||||||| |||||    
T  47165177 aatattacattacatccccatatccaaacaatggaattcaccttaaagtatttgaattccctcaaaacattacatttcctca 47165258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 8224856 - 8224795
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  8224856 catccaaacaatggaattcacatcaaagtatttcaattccctcaaaacattacattccctca 8224795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 37448387 - 37448447
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  37448387 atccaaacaatggaattcacatcaaagtatttaaattccctcaaaacattacattctctca 37448447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 49659303 - 49659243
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||    
T  49659303 atccaaacaatggaattcacctcaaagtatttaaattccctcgtaacattacattccctca 49659243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 946929 - 946869
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  946929 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 946869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 15467486 - 15467546
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  15467486 agagtgtgtttggatgaggtaattaagaaattttaaagaatttagaattctaggcaattta 15467546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 35499598 - 35499546
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctag 232  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||    
T  35499598 agagtgtgtttggatgaagtaatttgaaaattttaaagaatttagaattctag 35499546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 44570765 - 44570705
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||||    
T  44570765 atccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctca 44570705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 37447888 - 37447947
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctc 362  Q
    |||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||||||    
T  37447888 atccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctc 37447947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 31195540 - 31195483
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||| ||||||||||||| |||||||||| ||||| |||||||||||||||||    
T  31195540 caaacaatggaattcacctcaaaatatttaaatttcctcagaacattacattccctca 31195483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 34756511 - 34756454
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||||| || ||||||||||||||||||||||||||||    
T  34756511 caaacaatagaattcacctcaaagtagttgaattccctcaaaacattacattccctca 34756454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 306 - 359
Target Start/End: Original strand, 43622967 - 43623020
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 359  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||||||    
T  43622967 caaataatgaaattcacctcaaagtatttaaattttctcaaaacattacattcc 43623020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 220702 - 220642
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||  |||||| || |||||||| ||||||||||||||||    
T  220702 agagtgtgtttggatgaggtaattgaaaaattatagagaatttagaattctaggcaattta 220642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 12293020 - 12293080
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||||||||||||| | |||| | |||||||||| ||||||||||||||    
T  12293020 ttagagtgtgtttggatgaggtaattgggaaatctcaaagaatttagaattctaggcaatt 12293080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 15467949 - 15468009
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  15467949 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 15468009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 15034744 - 15034791
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  15034744 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 15034791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 23536141 - 23536094
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  23536141 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 23536094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 28632572 - 28632630
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctc 362  Q
    |||||||||||| |||||||||||||||| || ||||| |||||||||||||||||||||    
T  28632572 atccaaacaatggaattcacctcaaagta-ttgaattctctcaaaacattacattccctc 28632630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 6470675 - 6470732
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||| ||| |||||||||| |||| ||||||||||||||||||||||| ||||    
T  6470675 caaacaatggaatccacctcaaagaatttgaattccctcaaaacattacattctctca 6470732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 15034743 - 15034686
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||||||    
T  15034743 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 15034686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 42230807 - 42230758
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||||||| ||||| |||||||||| ||||||||||||    
T  42230807 atccaaacaatgaaattcacttcaaaatatttaaattacctcaaaacatt 42230758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 44571288 - 44571239
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||    
T  44571288 atccaaacaatggaattcacttcaaagtatttgaattccctcaaaacatt 44571239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 47820300 - 47820243
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    |||||||||||||||||||||  ||||||||| |||||||| |||||| |||||||||    
T  47820300 atccaaacaatgaaattcaccctaaagtatttgaattcccttaaaacaatacattccc 47820243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 946461 - 946402
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||  |||||| | |||||||||||||||||||||||||| ||||||||||||    
T  946461 atccaaacaatagaattcatc-caaagtatttaaattccctcaaaacaatacattccctca 946402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 947000 - 946940
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||||||| ||||||| |||| |||||||| | ||||||||||||    
T  947000 atccaaacaatggaattcacctcatagtatttgaatttcctcaaaataatacattccctca 946940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 4038146 - 4038102
Alignment:
Q  319 tcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||| || ||||||||||||||||||||||||||||    
T  4038146 tcacctcaaagtagttgaattccctcaaaacattacattccctca 4038102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 35491244 - 35491184
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||  ||||| ||||||||||| |||||||| || ||||||||||    
T  35491244 atccaaacaatgaaattcatatcaaaatatttaaattctctcaaaacgttgcattccctca 35491184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 38277498 - 38277442
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||  |||||||||||||||| || |||||| |||||||||||||||||||||    
T  38277498 aaacaatataattcacctcaaagtagttgaattccttcaaaacattacattccctca 38277442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 41480949 - 41481009
Alignment:
Q  175 cctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggca 235  Q
    |||| ||||||||||||||||||||||||| ||  |||||||| |||||||||| ||||||    
T  41480949 ccttaagagtgtgtttggatgaggtaatttaaattttttaaagcatttaaaattttaggca 41481009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 360
Target Start/End: Original strand, 5474474 - 5474528
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    ||||||||  ||||||||| |||||| || |||||||||||||||||||||||||    
T  5474474 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccc 5474528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 28632124 - 28632186
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||| |||||   ||||| |||| |||||| ||||||||||||||||    
T  28632124 ttagagtgtgtttggatgagataattgagaaattataaaaaatttagaattctaggcaattta 28632186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 41822683 - 41822733
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtattt-aaattccctcaaaacatt 352  Q
    |||||||||||| |||||| |||||||||||| ||||||||||||||||||    
T  41822683 atccaaacaatggaattcatctcaaagtatttgaaattccctcaaaacatt 41822733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 50471837 - 50471791
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaac 349  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  50471837 atccaaacaataaaattcacctgaaagtatttgaattccctcaaaac 50471791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 4038150 - 4038207
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||| ||||||||    
T  4038150 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctca 4038207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 6470228 - 6470289
Alignment:
Q  180 agagtgtgtttggatgaggtaattt-gaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||| ||||  |||| |||||||||||||| ||||||||| ||||||    
T  6470228 agagtgtgtttggatgaggcaattgagaaatttttaaagaatttagaattctaggtaattta 6470289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 21267796 - 21267841
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaa 348  Q
    ||||||||||||||||| | ||||||||||| ||||||||||||||    
T  21267796 atccaaacaatgaaatttatctcaaagtattcaaattccctcaaaa 21267841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 24273226 - 24273267
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  24273226 ctcaaagtatttgaattccctcataacattacattccctcaa 24273267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 32128113 - 32128068
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||| |||||||| |||||||||| |||||||||||||||||    
T  32128113 aaacaatggaattcaccacaaagtatttgaattccctcaaaacatt 32128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 32287934 - 32287979
Alignment:
Q  318 ttcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||||    
T  32287934 ttcacttcaaagtatttgaatttcctcaaaacattacattccctca 32287979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 37447345 - 37447394
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||| ||||||||||| ||||| |||||||||||    
T  37447345 atccaaacaatggaattcacatcaaagtatttgaattctctcaaaacatt 37447394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 41822529 - 41822578
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| |||||| || ||||||||| |||||||||||||||||    
T  41822529 atccaaacaatggaattcatcttaaagtatttgaattccctcaaaacatt 41822578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 49216324 - 49216373
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||| |||||||||||| |||||||||||||| ||||||||| |||||||    
T  49216324 atcccaacaatgaaatttacctcaaagtatttgaattccctcgaaacatt 49216373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 238
Target Start/End: Complemental strand, 10167034 - 10166986
Alignment:
Q  190 tggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||| ||||||||   ||||||||||||||||||||||||||||||||    
T  10167034 tggataaggtaattgataaattttaaagaatttaaaattctaggcaatt 10166986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 21267346 - 21267406
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||| |||||   ||||||||||||||||  |||| |||||||||||    
T  21267346 agagtgtgtttggatgagataattgagaaattttaaagaatttcgaattataggcaattta 21267406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 37036502 - 37036562
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||||| |||||||   ||||||| ||||||||| ||||||||| ||||    
T  37036502 ttagagtgtgtttggatggggtaattaagaaattttgaagaatttagaattctaggtaatt 37036562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 37036935 - 37036995
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||| ||||||| |||| || ||||| ||||| ||||||||||||||||||||||| ||||    
T  37036935 atccgaacaatggaatttacatcaaaatatttgaattccctcaaaacattacattcactca 37036995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 37446881 - 37446941
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||||| |||||||   ||||||| ||||||||| ||||||||| ||||    
T  37446881 ttagagtgtgtttggatggggtaattaagaaattttgaagaatttataattctaggtaatt 37446941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 4663859 - 4663808
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattcta 231  Q
    ||||| ||||||||||||||||||   ||||||||| |||||||||||||||    
T  4663859 agagtttgtttggatgaggtaattgacaaattttaaggaatttaaaattcta 4663808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 238
Target Start/End: Original strand, 23969438 - 23969497
Alignment:
Q  179 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||||||||||||| |||||||  ||  ||||||||||||||||||| || ||||||    
T  23969438 tagagtgtgtttggatggggtaattgaaattttttaaagaatttaaaattataagcaatt 23969497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 27804339 - 27804292
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||| || || ||||||||||||| ||||||||||||||    
T  27804339 aattcacctcaaaatagttgaattccctcaaaatattacattccctca 27804292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 27935570 - 27935617
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| ||||||||| || |||| |||||||||||||||||||||||    
T  27935570 aattcaactcaaagtagttgaatttcctcaaaacattacattccctca 27935617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 30190221 - 30190268
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||| || || |||| |||||||||||||||||||||||    
T  30190221 aattcacctcaaaatagttgaattacctcaaaacattacattccctca 30190268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 31166764 - 31166701
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||| ||||||||   ||||| ||||||||||| || ||||| |||||||    
T  31166764 tttagagtgtgtttggatcaggtaattgagaaattgtaaagaatttagaaatctagtcaattta 31166701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 32128633 - 32128574
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattt 239  Q
    |||||||||||| | |||||||||   |||||||||||||||||||||| |||| |||||    
T  32128633 agagtgtgtttgaacgaggtaattgagaaattttaaagaatttaaaattttaggtaattt 32128574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 34003465 - 34003414
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatta 353  Q
    |||||||| |||| ||||||||||||||||||| ||| ||||||||| ||||    
T  34003465 catccaaataatggaattcacctcaaagtatttgaatgccctcaaaatatta 34003414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 345
Target Start/End: Complemental strand, 34003549 - 34003506
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctca 345  Q
    ||||||||||||| ||||||||||||||||||| ||||| ||||    
T  34003549 catccaaacaatggaattcacctcaaagtatttgaattctctca 34003506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 37447424 - 37447486
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttga-aaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||| || |||||| ||||||| ||||||||| ||||||||| ||||||    
T  37447424 ttagagtgtgtttggatgaagt-atttgagaaattttgaagaatttagaattctaggtaattta 37447486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 240
Target Start/End: Original strand, 41822078 - 41822133
Alignment:
Q  185 gtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||| ||||||   |||||||| |||||||| ||||||||||||||||    
T  41822078 gtgtttggatgaagtaattgagaaattttacagaatttagaattctaggcaattta 41822133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 352
Target Start/End: Complemental strand, 32573006 - 32572960
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||  |||||||||||||||| || |||||||||||||||||    
T  32573006 caaacaatagaattcacctcaaagtagttgaattccctcaaaacatt 32572960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 32647388 - 32647334
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    ||||||||||||  ||||||| |||||||||| |||| |||||||||| ||||||    
T  32647388 atccaaacaatggtattcaccccaaagtatttgaatttcctcaaaacaatacatt 32647334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 361
Target Start/End: Complemental strand, 39887214 - 39887156
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccct 361  Q
    |||||||||||| ||||||| ||||||||||| |||| | ||||||||| | |||||||    
T  39887214 atccaaacaatggaattcacatcaaagtatttgaatttcttcaaaacatcatattccct 39887156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 44571738 - 44571680
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||| |||||||||||| | ||||| ||||||||||| ||| ||||| ||||||    
T  44571738 agtgtgtttcgatgaggtaattgggaaattataaagaatttagaatcctaggtaattta 44571680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 245 - 283
Target Start/End: Original strand, 47165221 - 47165259
Alignment:
Q  245 aaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  47165221 aaagtatttgaattccctcaaaacattacatttcctcaa 47165259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 352
Target Start/End: Original strand, 52135610 - 52135660
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||| |||| ||| ||||| |||||||||||||||||    
T  52135610 catccaaacaataaaatttacctaaaaatatttgaattccctcaaaacatt 52135660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 28745881 - 28745926
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccct 361  Q
    ||||||||||||| || || ||||||||||||| ||||||||||||    
T  28745881 aattcacctcaaaatagttgaattccctcaaaatattacattccct 28745926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 41823146 - 41823195
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| |||||| ||||| |||||| |||||| ||||||||||    
T  41823146 atccaaacaatggaattcatctcaaggtatttgaattccttcaaaacatt 41823195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Original strand, 45565478 - 45565515
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||||||||| || |||||||||||||||||    
T  45565478 aaattcacctcaaagtagttgaattccctcaaaacatt 45565515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 50005163 - 50005106
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||| | || ||||| ||||||||||||||||| ||||    
T  50005163 caaacaatagaattcacctcaaagaagttgaattcgctcaaaacattacattctctca 50005106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 352
Target Start/End: Complemental strand, 5474473 - 5474437
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||| |||||||| ||||||||||||||||||||    
T  5474473 aattcacttcaaagtaattaaattccctcaaaacatt 5474437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 216
Target Start/End: Original strand, 21088258 - 21088294
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaa 216  Q
    |||||||||||| ||||||||||| ||||||||||||    
T  21088258 agagtgtgtttgaatgaggtaattggaaaattttaaa 21088294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 26501086 - 26501126
Alignment:
Q  243 tcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||| |||||| |||| ||||||    
T  26501086 tcaaagtatttgaattccctcaaaacattacattccctcaa 26501126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 37447969 - 37448029
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||||| |||||||   ||||||| | ||||||| ||||||||| ||||    
T  37447969 ttagagtgtgtttggatggggtaattgagaaattttgatgaatttagaattctagggaatt 37448029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 363
Target Start/End: Original strand, 38277499 - 38277547
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||| ||||||||| || || |||||||||||||||||||||| |||||    
T  38277499 aaatccacctcaaaataattgaattccctcaaaacattacattacctca 38277547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 45565477 - 45565421
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||  ||||||||| ||| || || ||||||||||||||||||||||| ||||    
T  45565477 aaacaatagaattcaccttaaaatagttgaattccctcaaaacattacattctctca 45565421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 363
Target Start/End: Original strand, 52280967 - 52280999
Alignment:
Q  331 atttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||||| ||||||||    
T  52280967 atttaaattccctcaaaacattactttccctca 52280999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 144; Significance: 1e-75; HSPs: 82)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 180 - 363
Target Start/End: Original strand, 37722754 - 37722937
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcc 279  Q
    |||||||||||||||   |||||||| ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| | |||||||    
T  37722754 agagtgtgtttggattgagtaatttggaaattttaaagaatttaaaattctaggtaatttacctcaaagtatttgaattccctcataacactacatttcc 37722853  T
Q  280 tcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37722854 tcaacattacattacattcccccatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacattacattccctca 37722937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 182 - 363
Target Start/End: Original strand, 19533769 - 19533950
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctc 281  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||| |||||||||    
T  19533769 agtgtgtttgaatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaaatatttgaattccctcgtaatattacatttcctc 19533868  T
Q  282 aacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  19533869 aagattacattacattcccccatccaaacaatgaaattcacctcaaagtatttgaattccctcataacattacattccctca 19533950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 178 - 363
Target Start/End: Original strand, 25935149 - 25935333
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 277  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  25935149 ttagagtgtgtttggatgaggtaatttagaaattttaaagaatttaaaattctaggcaatt-atctcaaagtatttgaattccctcataacattacattt 25935247  T
Q  278 cctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    | | ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||| |||||||||||||||||    
T  25935248 cattaacattacattacattcccccatccaaacaatggaattcacctcaaagtatttgaatttcctcataacattacattccctca 25935333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 12064316 - 12064500
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 277  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||    
T  12064316 ttagagtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattcccacataacattacattt 12064415  T
Q  278 cctcaacattacattac----------attcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||||          ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12064416 cctcaacattacattacattacattatatttccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 12064500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 213 - 363
Target Start/End: Original strand, 37145395 - 37145544
Alignment:
Q  213 taaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctcaacattacattacattcccccatccaaacaa 312  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||| || ||||||||||||||||||| |||||||||||    
T  37145395 taaagaatttaaaattctaggcaatt-atctcaaagtatttgaattccctcatagcattacattttcttaacattacattacattccctcatccaaacaa 37145493  T
Q  313 tgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||||||||    
T  37145494 tgaaattcacctcaaagtatttgaattctctcataacattacattccctca 37145544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 180 - 271
Target Start/End: Original strand, 20320529 - 20320620
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacatt 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||    
T  20320529 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccttcattacatt 20320620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 32249647 - 32249709
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32249647 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttagaattctaggcaattta 32249709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 12480449 - 12480389
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  12480449 agagtgtgtttggatgaggtaattggaaaattttaaagaatttagaattctaagcaattta 12480389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 303 - 362
Target Start/End: Complemental strand, 14834911 - 14834852
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctc 362  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  14834911 atccaaacaatgaaattcacctcaaagtatttggattcccttaaaacattacattccctc 14834852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 305 - 363
Target Start/End: Original strand, 22303855 - 22303913
Alignment:
Q  305 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||    
T  22303855 ccaaacaatgaaattcacctcaaggtatttgaattccttcaaaacattacattccctca 22303913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 927389 - 927329
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||||||||||||    
T  927389 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacattccctca 927329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 13390962 - 13391022
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||    
T  13390962 agagtgtgtttggatgaggtaattgggaaattttaaagaatttagaattctaagcaattta 13391022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 40090397 - 40090457
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  40090397 atccaaacaatggaattcacctcaaagtatttgaattccatcaaaacattacatttcctca 40090457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 238
Target Start/End: Original strand, 15270409 - 15270475
Alignment:
Q  172 attcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||| ||||| |||||||| ||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  15270409 attcccttagaatgtgtttgaatgaggtaattggaaaattttaaagaatttagaattctaggtaatt 15270475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 28490009 - 28489951
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  28490009 agtgtgtttggatgaggtaattagaaaattttaaggaatttagaatcctaggcaattta 28489951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 40089410 - 40089472
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||||| | ||||||||||||||||| | | ||||||||||||    
T  40089410 ttagagtgtgtttggatgaggtaattaggaaattttaaagaatttagattcctaggcaattta 40089472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 41761742 - 41761804
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| |||| |||||||||||    
T  41761742 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattttaggcaattta 41761804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 33146260 - 33146211
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  33146260 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 33146211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 9894305 - 9894365
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||||||||||||||| ||||||||   |||||||||||||||||    
T  9894305 atccaaacaatggaattcacctcaaagtatttgaattccctggtaacattacattccctca 9894365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 295 - 359
Target Start/End: Original strand, 20320623 - 20320687
Alignment:
Q  295 attcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattcc 359  Q
    |||||||||||||||||||| |||||||  |||||||||| |||||||| |||| ||||||||||    
T  20320623 attcccccatccaaacaatggaattcacaccaaagtatttgaattcccttaaaatattacattcc 20320687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 22767039 - 22766979
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||  ||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  22767039 atccaaacaatagaattcaccttaaagtatttgaattccctcaaaacattatattccctca 22766979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 351
Target Start/End: Complemental strand, 28490079 - 28490031
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacat 351  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  28490079 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacat 28490031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 32250081 - 32250141
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||| ||||| |||||| ||||||||||||||||||| ||||||||    
T  32250081 atccaaacaatggaattcatctcaaggtatttgaattccctcaaaacattactttccctca 32250141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 38178813 - 38178865
Alignment:
Q  188 tttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  38178813 tttggatgaggtaattggaaaattttaaagaatttagaattataggcaattta 38178865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 188 - 240
Target Start/End: Original strand, 38206037 - 38206089
Alignment:
Q  188 tttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||||||||||    
T  38206037 tttggatgaggtaattggaaaattttaaagaatttagaattataggcaattta 38206089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 41762198 - 41762258
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  41762198 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 41762258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 240
Target Start/End: Complemental strand, 927853 - 927790
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||| |||||||||||   ||||||||||||||||| |||||||| |||||||    
T  927853 tttagagtgtgtttgaatgaggtaattgagaaattttaaagaatttagaattctagacaattta 927790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 15374034 - 15373987
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  15374034 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 15373987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 32390057 - 32390104
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  32390057 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 32390104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 317 - 363
Target Start/End: Original strand, 2721557 - 2721603
Alignment:
Q  317 attcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  2721557 attcacctcaaagtagttgaattccctcaaaacattacattccctca 2721603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 6771823 - 6771881
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||||| ||||| | ||||||||||||||||| ||||||| ||||||    
T  6771823 agagtgtgtttggatgagttaattgggaaattttaaagaatttagaattctatgcaatt 6771881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 8255113 - 8255060
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  8255113 atccaaacaatgaaattcacctaaaa-tatttgaattccctcaaaacattacatt 8255060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 12479990 - 12479940
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    |||||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  12479990 aaacaatgaaattcacctcaaagtatttgaatttcctcaaaactttacatt 12479940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 15270840 - 15270886
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  15270840 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 15270886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 175 - 240
Target Start/End: Original strand, 15579993 - 15580059
Alignment:
Q  175 cctttagagtgtgtttggatgagg-taatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||| ||||||||||||||||||| ||||| | |||||||||| ||||||||||||||| |||||||    
T  15579993 ccttaagagtgtgtttggatgagggtaattaggaaattttaaaaaatttaaaattctagacaattta 15580059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 306 - 352
Target Start/End: Original strand, 17542347 - 17542393
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||    
T  17542347 caaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 17542393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 22304732 - 22304794
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||| ||| |||||||||||| | ||||||||||||||||| ||| ||||||||||||    
T  22304732 ttagagtgtattttgatgaggtaattgggaaattttaaagaatttagaatcctaggcaattta 22304794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 354
Target Start/End: Original strand, 6772195 - 6772245
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattac 354  Q
    ||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  6772195 catccaaacaatgaaattcacctc--agtatttaaattccctcataacattac 6772245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 302 - 351
Target Start/End: Original strand, 17492630 - 17492679
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacat 351  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||||||||||    
T  17492630 catccaaacaatggaattcacctcaaattatttgaattccctcaaaacat 17492679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 22304729 - 22304672
Alignment:
Q  183 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||    
T  22304729 gtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctagacaattta 22304672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 22305181 - 22305132
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| |||||||||||||||| || |||||||||||||||||    
T  22305181 atccaaacaatggaattcacctcaaagtagttgaattccctcaaaacatt 22305132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 28490458 - 28490395
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaatttt--aaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||||| |||| ||||  |||||||||||||||| ||||||||||    
T  28490458 ttagagtgtgtttggatgaggtaatt-gaaatttttttaaagaatttaaaattcaaggcaattta 28490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 37241093 - 37241142
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||||||||||||||| |||||||| ||||||||    
T  37241093 atccaaacaatggaattcacctcaaagtatttcaattccctgaaaacatt 37241142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 17541884 - 17541944
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||| |||| |||||||    
T  17541884 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaatcctagacaattta 17541944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 2316464 - 2316511
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||| ||||||||||||||||||||||    
T  2316464 aattcacctcaaagtagttgaattctctcaaaacattacattccctca 2316511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 3563351 - 3563304
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||    
T  3563351 aattcaccttaaagtagttgaattccctcaaaacattacattccctca 3563304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 319 - 362
Target Start/End: Original strand, 9764426 - 9764469
Alignment:
Q  319 tcacctcaaagtatttaaattccctcaaaacattacattccctc 362  Q
    ||||||||||||| || |||||||||||||||||||||||||||    
T  9764426 tcacctcaaagtagttgaattccctcaaaacattacattccctc 9764469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 26281265 - 26281312
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||    
T  26281265 aattcaccttaaagtagttgaattccctcaaaacattacattccctca 26281312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 32317225 - 32317175
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 228  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||||||||    
T  32317225 tttagagagtgtttggattaggtaatt-gaaaattttaaagaatttaaaatt 32317175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 32470967 - 32471014
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||    
T  32470967 aattcaactcaaagtagttgaattccctcaaaacattacattccctca 32471014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 302 - 357
Target Start/End: Complemental strand, 35379431 - 35379376
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    ||||||| |||| |||||||| |||||| |||| ||||||||||||||||||||||    
T  35379431 catccaatcaataaaattcacttcaaagaatttgaattccctcaaaacattacatt 35379376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 238
Target Start/End: Complemental strand, 35111760 - 35111702
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||||||| |||||||   ||||||||||||||||| ||||||||| ||||    
T  35111760 agagtgtgtttggatggggtaattgagaaattttaaagaatttagaattctagggaatt 35111702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 358
Target Start/End: Original strand, 37241598 - 37241640
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattc 358  Q
    |||||| |||||||||||| |||||||||||||||||||||||    
T  37241598 aattcagctcaaagtatttgaattccctcaaaacattacattc 37241640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 9764422 - 9764365
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||| ||||||||    
T  9764422 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctca 9764365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 15374035 - 15374092
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| | |||| || ||||||||||||||||||||||||||||    
T  15374035 caaacaatagaattcaccttagagtagttgaattccctcaaaacattacattccctca 15374092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 361
Target Start/End: Original strand, 16515103 - 16515148
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccct 361  Q
    |||||||||||||| | || ||||||||||||||||||||||||||    
T  16515103 aattcacctcaaagaagttgaattccctcaaaacattacattccct 16515148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 19533910 - 19533951
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  19533910 ctcaaagtatttgaattccctcataacattacattccctcaa 19533951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 20523208 - 20523265
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||| ||||    
T  20523208 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattctctca 20523265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 34105158 - 34105109
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||||||||||| |||||||||||| ||||  |||||||||||    
T  34105158 atccaaacaatgaaattcatctcaaagtatttgaattttctcaaaacatt 34105109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 37091135 - 37091078
Alignment:
Q  181 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||||||||||||||||||| | |||| |||||||||||| || |||||| ||||    
T  37091135 gagtgtgtttggatgaggtaattggtaaatcttaaagaatttagaactctaggtaatt 37091078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 213
Target Start/End: Complemental strand, 37145399 - 37145362
Alignment:
Q  176 ctttagagtgtgtttggatgaggtaatttgaaaatttt 213  Q
    |||||||||||||||||||||||||||||| |||||||    
T  37145399 ctttagagtgtgtttggatgaggtaatttggaaatttt 37145362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 222
Target Start/End: Original strand, 17492691 - 17492731
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaattt 222  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  17492691 agtgtgtttggatgaggtaattagaaaattttaaaaaattt 17492731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 238
Target Start/End: Original strand, 33995442 - 33995502
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    ||||||||||||||||||| ||||||   ||||||||||||| ||| |||| |||||||||    
T  33995442 ttagagtgtgtttggatgatgtaattgacaaattttaaagaaattagaattttaggcaatt 33995502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 302 - 353
Target Start/End: Complemental strand, 11601127 - 11601076
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatta 353  Q
    |||||||| ||| |||||||||||||| ||||| |||||| |||||||||||    
T  11601127 catccaaataataaaattcacctcaaattatttgaattccttcaaaacatta 11601076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 15804396 - 15804349
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| ||||||||| || ||||||||||||||| ||||||||||||    
T  15804396 aattcaactcaaagtagttgaattccctcaaaacactacattccctca 15804349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 16515078 - 16515031
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||| | || |||||||||||||| |||||||||||||    
T  16515078 aattcacctcaaagaagttgaattccctcaaaaccttacattccctca 16515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 20523207 - 20523160
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || |||||||||| || ||||||||||||||    
T  20523207 aattcacctcaaagtagttgaattccctcagaatattacattccctca 20523160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 2550385 - 2550348
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||||||||| || |||||||||||||||||    
T  2550385 aaattcacctcaaagtagttgaattccctcaaaacatt 2550348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 240
Target Start/End: Complemental strand, 8255507 - 8255446
Alignment:
Q  179 tagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||| |||||||||||| |||||   ||||||| ||||||||| |||| |||||||||||    
T  8255507 tagagtatgtttggatgagataattgagaaattttgaagaatttataattttaggcaattta 8255446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 25935293 - 25935334
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    ||||||||||||||||| |||||||||||| |||| ||||||    
T  25935293 ctcaaagtatttgaatttcctcataacattacattccctcaa 25935334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 348
Target Start/End: Complemental strand, 28489546 - 28489505
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaa 348  Q
    |||||||| ||||||||||||||||||| ||||| |||||||    
T  28489546 aaacaatggaattcacctcaaagtatttgaattctctcaaaa 28489505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 30519079 - 30519034
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    ||||||||| |||| ||||| |||||||||| ||||||||||||||    
T  30519079 aaattcaccgcaaaatatttgaattccctcataacattacattccc 30519034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 360
Target Start/End: Complemental strand, 30559419 - 30559374
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    ||||||||| |||| ||||| |||||||||| ||||||||||||||    
T  30559419 aaattcaccgcaaaatatttgaattccctcataacattacattccc 30559374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 33146639 - 33146570
Alignment:
Q  171 aattcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||| ||| ||||||||||||||||||||| ||   |||||| |||||||||| |||  |||||||||||    
T  33146639 aatttcttaagagtgtgtttggatgaggtagttgagaaatttcaaagaatttagaatcttaggcaattta 33146570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 360
Target Start/End: Complemental strand, 35111313 - 35111256
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    |||||||||||  || |||| ||||| ||||| |||||| ||||||||||||||||||    
T  35111313 atccaaacaatagaactcacatcaaaatatttgaattccttcaaaacattacattccc 35111256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 37145504 - 37145545
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||| ||||||||||| |||| ||||||    
T  37145504 ctcaaagtatttgaattctctcataacattacattccctcaa 37145545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 37722897 - 37722938
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    ||||||||||||||||||||||| |||||| |||| ||||||    
T  37722897 ctcaaagtatttgaattccctcaaaacattacattccctcaa 37722938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 283
Target Start/End: Original strand, 40090417 - 40090458
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    ||||||||||||||||||| ||| |||||| |||||||||||    
T  40090417 ctcaaagtatttgaattccatcaaaacattacatttcctcaa 40090458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 40643893 - 40643949
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| ||| || || ||||||||||||||||||||||||||||    
T  40643893 caaacaatagaattcaccttaaa-tagttgaattccctcaaaacattacattccctca 40643949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 40809416 - 40809473
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||| |||||||||| ||||||  | ||||| ||||||||||||||||| ||||    
T  40809416 caaacaataaaattcaccttaaagtagctgaattcactcaaaacattacattctctca 40809473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 335 - 363
Target Start/End: Original strand, 15804398 - 15804426
Alignment:
Q  335 aaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||||||||||||||||    
T  15804398 aaattccctcaaaacattacattccctca 15804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 221
Target Start/End: Complemental strand, 41789634 - 41789591
Alignment:
Q  177 tttagagtgtgtttggatgaggtaatttgaaaattttaaagaatt 221  Q
    ||||||||||||||||| |||||||  ||||||||||||||||||    
T  41789634 tttagagtgtgtttggacgaggtaa-atgaaaattttaaagaatt 41789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 142; Significance: 2e-74; HSPs: 66)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 175 - 363
Target Start/End: Complemental strand, 23011949 - 23011761
Alignment:
Q  175 cctttagagtgtgttt-ggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgc 273  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  23011949 cctttagagtgtgttttggatgaggtaatttagaaattttaaagaatttaaaattctaggcaatt-atctcaaagtatttgaattccctcataacattac 23011851  T
Q  274 atttcctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||||    
T  23011850 atttccttaacattacattaaattcccccatccaaacaatggaattcacctcaaagtatttgaattccctcataacattacattccctca 23011761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 178 - 352
Target Start/End: Original strand, 30444804 - 30444978
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcattt 277  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||| |||||    
T  30444804 ttagagtgtgtttggatgaagtaatttggaaattttaaagaatttaaaattctaggcaatttacctcaaagtatttgaattccttcctaacattacattt 30444903  T
Q  278 cctcaacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||| || ||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  30444904 ccttaatattacattacattccaccatccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 30444978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 182 - 363
Target Start/End: Complemental strand, 36103308 - 36103128
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctc 281  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||| |||||||||| | |||||||||| |||||||||    
T  36103308 agtgtgtttggatgaggtaatttggaaattttaaagaatttaaaattctaggcaatttacctaaaa-tatttgaatttcttcataacattacatttcctc 36103210  T
Q  282 aacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    || |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||| ||| |||||||||||||||||||    
T  36103209 aatattacattacattcccccatccaaacaatgcaattcacatcaaagtatttgaatttccttaaaacattacattccctca 36103128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 224 - 359
Target Start/End: Original strand, 515449 - 515584
Alignment:
Q  224 aaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcctcaacattacattacattcccccatccaaacaatgaaattcacc 323  Q
    ||||| ||||||||||| |||||| |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||     
T  515449 aaattttaggcaatttacctcaaaatatttgaattccttcataacattacatttcctcaatattacattacattcccccatccaaacaatgaaattcaca 515548  T
Q  324 tcaaagtatttaaattccctcaaaacattacattcc 359  Q
    ||||||||||| || ||||| |||||||||||||||    
T  515549 tcaaagtatttgaactcccttaaaacattacattcc 515584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 282 - 363
Target Start/End: Original strand, 21465548 - 21465629
Alignment:
Q  282 aacattacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||||||||  || ||||||||||||||    
T  21465548 aacattacattgcattcccccatccaaacaatggaattaacctcaaagtatttgaattccctcgtaaaattacattccctca 21465629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 8049341 - 8049281
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||    
T  8049341 atccaaacaatgaaatttacctcaaagtatttgaattccctcaaaacattatattccctca 8049281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 29611457 - 29611408
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29611457 atccaaacaatgaaattcacctcaaagtatttgaattccctcaaaacatt 29611408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Complemental strand, 29611872 - 29611812
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||| ||||||| ||||||||||||||||||| |||| |||||||||||    
T  29611872 agagtgtgtttggatgtggtaattggaaaattttaaagaatttagaattttaggcaattta 29611812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 44346221 - 44346281
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  44346221 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 44346281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 44889441 - 44889381
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||| ||||||||||| |||||||||||||||||| |||||||||    
T  44889441 atccaaacaatggaattcacatcaaagtatttgaattccctcaaaacattatattccctca 44889381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 307 - 362
Target Start/End: Complemental strand, 14321 - 14266
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctc 362  Q
    ||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  14321 aaacaatgaaattcaccccaaagtatttgaattcccttaaaacattacattccctc 14266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 31980047 - 31980106
Alignment:
Q  181 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  31980047 gagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 31980106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 14789 - 14727
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||| ||||   ||||||||||||||||| ||||||||||||||||    
T  14789 ttagagtgtgtttggatgaggaaattgagaaattttaaagaatttagaattctaggcaattta 14727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 303 - 357
Target Start/End: Complemental strand, 13144670 - 13144616
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    |||||||||||| ||||||||||||||||||| |||||||||| |||||||||||    
T  13144670 atccaaacaatggaattcacctcaaagtatttgaattccctcataacattacatt 13144616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 13145131 - 13145073
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||| |||||||||| | ||| ||||||||||||||||||||||||||||||    
T  13145131 agtgtgtttgggtgaggtaattgggaaaatttaaagaatttaaaattctaggcaattta 13145073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 305 - 363
Target Start/End: Complemental strand, 24045045 - 24044987
Alignment:
Q  305 ccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||| |||||||||||| |||||| |||||| |||||||||||||||||||||    
T  24045045 ccaaacaatggaattcacctcaaggtatttgaattccttcaaaacattacattccctca 24044987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 33376827 - 33376889
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| ||||||||| ||||||    
T  33376827 ttagagtgtgtttggatgaggtaattgataaattttaaagaatttagaattctaggtaattta 33376889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 33986087 - 33986037
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  33986087 aaacaatgaaattcacctcaaagtatttgaattctctcaaaacattacatt 33986037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 240
Target Start/End: Original strand, 40733641 - 40733695
Alignment:
Q  186 tgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||||||    
T  40733641 tgtttggatgaggtaattgagaaattttaaagaatttaaaattctaggcaattta 40733695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 43185531 - 43185469
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||   ||||||||||||||||| |||||||| |||||||    
T  43185531 ttagagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattctagacaattta 43185469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 13404902 - 13404959
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||| ||||||| ||||||||| || ||||||||||||||||||||||||||||    
T  13404902 caaacaataaaattcatctcaaagtagttgaattccctcaaaacattacattccctca 13404959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Original strand, 26520435 - 26520484
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  26520435 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 26520484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 34008868 - 34008819
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  34008868 atccaaacaatggaattcacctcaaagtatttgaattccctcaaaacatt 34008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 28324658 - 28324718
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||| ||||| |||||| |||||| |||||||||||||||||||||    
T  28324658 atccaaacaatgtaattcagctcaaggtatttgaattccttcaaaacattacattccctca 28324718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 29256913 - 29256973
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||| |||||||||   ||||||||||||||||| ||||||||||||||||    
T  29256913 agagtgtgtttggacgaggtaattgagaaattttaaagaatttagaattctaggcaattta 29256973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 29257347 - 29257407
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  29257347 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 29257407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 29482803 - 29482863
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| ||| ||||||||    
T  29482803 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatacgttccctca 29482863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 33377293 - 33377353
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| ||||||||||||||| || |||||||||    
T  33377293 atccaaacaatggaattcaccccaaagtatttgaattccctcaaaacaatatattccctca 33377353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 35978592 - 35978652
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||| ||||   |||||||||||||||||||||||||| |||||||    
T  35978592 agagtgtgtttggatgaggcaattgagaaattttaaagaatttaaaattctagtcaattta 35978652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 35979000 - 35979060
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| ||||||||||||||||||| |||||||||  || ||||||||||||||    
T  35979000 atccaaacaatggaattcacctcaaagtatttgaattccctcttaagattacattccctca 35979060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 44346674 - 44346734
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||||||||| |||||||| |||||| ||||||||||||    
T  44346674 atccaaacaatggaattcaccccaaagtatttgaattcccttaaaacaatacattccctca 44346734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 10593620 - 10593562
Alignment:
Q  181 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||||||   |||||||||| |||||||||||||||||||||||    
T  10593620 gagtgtgtttggatgaggtaattgagaaattttaaa-aatttaaaattctaggcaattta 10593562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 240
Target Start/End: Original strand, 31976666 - 31976725
Alignment:
Q  181 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||| ||||||||||||||||   ||||||||||||||||| ||||||||||||||||    
T  31976666 gagtgtttttggatgaggtaattgagaaattttaaagaatttagaattctaggcaattta 31976725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 307 - 357
Target Start/End: Complemental strand, 9982719 - 9982669
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||||||||    
T  9982719 aaacaatggaattcacctcaaaatatttaaattctctcaaaacattacatt 9982669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 240
Target Start/End: Original strand, 26519984 - 26520042
Alignment:
Q  182 agtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||| | ||||||   ||||||||||||||||||||||||||||||||||    
T  26519984 agtgtgtttggataaagtaattgataaattttaaagaatttaaaattctaggcaattta 26520042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 33986548 - 33986486
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||||   |||||||||||||||   ||||||||||||||||    
T  33986548 ttagagtgtgtttggatgaggtaattgagaaattttaaagaattcggaattctaggcaattta 33986486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 3853700 - 3853643
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||||| || |||| |||||||||||||||||||||||    
T  3853700 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctca 3853643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 3858158 - 3858101
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||||||||||||| || |||| |||||||||||||||||||||||    
T  3858158 caaacaatagaattcacctcaaagtagttgaatttcctcaaaacattacattccctca 3858101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 17110944 - 17111001
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||||||||||||    
T  17110944 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattacattccctca 17111001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 180 - 240
Target Start/End: Original strand, 29482341 - 29482401
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||||||||||||||||   ||||||||||||||||| |||| |||| ||||||    
T  29482341 agagtgtgtttggatgaggtaattgagaaattttaaagaatttagaattataggaaattta 29482401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 17110943 - 17110896
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||    
T  17110943 aattcaactcaaagtagttgaattccctcaaaacattacattccctca 17110896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 35404738 - 35404797
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctc 362  Q
    ||||||||| | |||||||||||||||||||| |||| |||||||| |||||||| ||||    
T  35404738 atccaaacagtaaaattcacctcaaagtatttgaatttcctcaaaatattacattacctc 35404797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 42711365 - 42711412
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||    
T  42711365 aattcaactcaaagtagttgaattccctcaaaacattacattccctca 42711412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 31976578 - 31976632
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    ||||||||||||||||||| |||||| ||||| |||| ||||||| |||||||||    
T  31976578 atccaaacaatgaaattcatctcaaaatatttgaatttcctcaaagcattacatt 31976632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 31980479 - 31980533
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    ||||||| ||||||||||||| |||| ||||| |||||||| |||||||||||||    
T  31980479 atccaaataatgaaattcaccccaaaatatttgaattcccttaaaacattacatt 31980533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 363
Target Start/End: Complemental strand, 40046877 - 40046831
Alignment:
Q  317 attcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||| ||||||||| || ||||||||||||||||||||||||||||    
T  40046877 attcaactcaaagtagttgaattccctcaaaacattacattccctca 40046831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 4156242 - 4156299
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  |||||| || |||||| || ||||||||||||||||||||||||||||    
T  4156242 caaacaatagaattcatcttaaagtagttgaattccctcaaaacattacattccctca 4156299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 14800035 - 14800092
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||| ||||||||||  ||||| || ||||||||||||||||||| ||||||||    
T  14800035 caaacaataaaattcaccttgaagtagttgaattccctcaaaacattactttccctca 14800092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 283
Target Start/End: Complemental strand, 23011801 - 23011760
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  23011801 ctcaaagtatttgaattccctcataacattacattccctcaa 23011760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 269
Target Start/End: Original strand, 21465308 - 21465352
Alignment:
Q  225 aattctaggcaatttatctcaaagtatttgaattccctcataaca 269  Q
    ||||||||| |||||| || |||||||||||||||||||||||||    
T  21465308 aattctaggtaatttaccttaaagtatttgaattccctcataaca 21465352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 240
Target Start/End: Original strand, 28190227 - 28190291
Alignment:
Q  176 ctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||||||| |||| ||||| ||||| |||||||| |||||| ||| ||||||| ||||||||    
T  28190227 ctttagagtgtatttgaatgagataattcgaaaatttgaaagaacttagaattctacgcaattta 28190291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 180 - 231
Target Start/End: Complemental strand, 9983197 - 9983146
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattcta 231  Q
    ||||||||||||||||||||||||   ||||||| ||||||||| |||||||    
T  9983197 agagtgtgtttggatgaggtaattgagaaattttgaagaatttagaattcta 9983146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 242 - 277
Target Start/End: Complemental strand, 13144650 - 13144615
Alignment:
Q  242 ctcaaagtatttgaattccctcataacattgcattt 277  Q
    |||||||||||||||||||||||||||||| |||||    
T  13144650 ctcaaagtatttgaattccctcataacattacattt 13144615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 14013267 - 14013326
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaat 237  Q
    ||||||||| |||||| ||| ||||| ||||||||| | ||||||| |||||||||||||    
T  14013267 ttagagtgtatttggacgagttaattagaaaattttgatgaatttagaattctaggcaat 14013326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 363
Target Start/End: Original strand, 37268096 - 37268139
Alignment:
Q  320 cacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||| || ||||||||||||||||||||||||| |||||    
T  37268096 cacctcaaaataattaaattccctcaaaacattacattacctca 37268139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 1087844 - 1087906
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||| |||||| |||||||||||   ||||||||||||||||| |||| |||| ||||||    
T  1087844 ttagagtatgtttgaatgaggtaattgagaaattttaaagaatttagaattttaggaaattta 1087906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 33902732 - 33902694
Alignment:
Q  325 caaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||| || ||||||||||||||||||||||||||||    
T  33902732 caaagtagttgaattccctcaaaacattacattccctca 33902694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 193 - 238
Target Start/End: Complemental strand, 7079825 - 7079780
Alignment:
Q  193 atgaggtaatttgaaaattttaaagaatttaaaattctaggcaatt 238  Q
    |||||||||||   ||||||||||||||||||||||||||| ||||    
T  7079825 atgaggtaattgagaaattttaaagaatttaaaattctaggtaatt 7079780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 352
Target Start/End: Complemental strand, 7202922 - 7202885
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    ||||||||||||||||| || |||||||||||||||||    
T  7202922 aaattcacctcaaagtagttgaattccctcaaaacatt 7202885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 171 - 240
Target Start/End: Complemental strand, 34009247 - 34009178
Alignment:
Q  171 aattcctttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||| ||| ||||||||||||||||||||| ||   |||||| |||||||||| |||  |||||||||||    
T  34009247 aatttcttaagagtgtgtttggatgaggtagttgagaaatttcaaagaatttagaatcttaggcaattta 34009178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 1088273 - 1088333
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||| ||| |||| ||||| |||| |||||||||| ||||||| ||||    
T  1088273 atccaaacaatggaatttaccccaaaatatttgaatttcctcaaaacaatacattctctca 1088333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 271
Target Start/End: Complemental strand, 8049328 - 8049292
Alignment:
Q  235 aatttatctcaaagtatttgaattccctcataacatt 271  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  8049328 aatttacctcaaagtatttgaattccctcaaaacatt 8049292  T

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Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 283
Target Start/End: Original strand, 13404912 - 13404960
Alignment:
Q  235 aatttatctcaaagtatttgaattccctcataacattgcatttcctcaa 283  Q
    |||| ||||||||||| ||||||||||||| |||||| |||| ||||||    
T  13404912 aattcatctcaaagtagttgaattccctcaaaacattacattccctcaa 13404960  T

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Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 363
Target Start/End: Complemental strand, 30435320 - 30435273
Alignment:
Q  315 aaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||| |||||| || |||||||||||| ||||||||||||||||||    
T  30435320 aaattcaactcaaa-tagttaaattccctccaaacattacattccctca 30435273  T

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Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 363
Target Start/End: Original strand, 33902751 - 33902799
Alignment:
Q  316 aattcacctcaaagta-tttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| ||| |||||||||||||||  |||||||||||    
T  33902751 aattcacctcaaagtagtttgaattccctcaaaacaaaacattccctca 33902799  T

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Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 352
Target Start/End: Complemental strand, 42740013 - 42739969
Alignment:
Q  308 aacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||| ||||||| ||||||||| || |||||||||||||||||    
T  42740013 aacaataaaattcatctcaaagtagttgaattccctcaaaacatt 42739969  T

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Target: scaffold0027 (Bit Score: 79; Significance: 7e-37; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 181 - 283
Target Start/End: Complemental strand, 11378 - 11276
Alignment:
Q  181 gagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaatttatctcaaagtatttgaattccctcataacattgcatttcct 280  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  11378 gagtgtgtttggatgaggtaatttggaaattgtaaagaatttaaaattttaggcaatttacctcaaagtatttgaattccttcataacattacatttcct 11279  T
Q  281 caa 283  Q
    |||    
T  11278 caa 11276  T

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Target: scaffold0027; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 285 - 361
Target Start/End: Complemental strand, 10991 - 10915
Alignment:
Q  285 attacattacattcccccatccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccct 361  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||    
T  10991 attacattacattcccccatccaaacaatggaattcacgtcaaagtatttgaattccctcaaaacattacattccct 10915  T

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Target: scaffold0169 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 4162 - 4102
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  4162 atccaaacaatagaattcacctcaaagtatttgaattccctcaaaacattacattctctca 4102  T

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Target: scaffold0169; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 4570 - 4508
Alignment:
Q  178 ttagagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||||  ||||| | ||||||||||||||||| ||||||||||||||||    
T  4570 ttagagtgtgtttggatgaactaattgggaaattttaaagaatttagaattctaggcaattta 4508  T

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Target: scaffold0039 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 303 - 352
Target Start/End: Complemental strand, 109118 - 109069
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacatt 352  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  109118 atccaaacaatggaattcacatcaaagtatttaaattccctcaaaacatt 109069  T

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Target: scaffold0318 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 303 - 358
Target Start/End: Complemental strand, 2953 - 2899
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattc 358  Q
    |||||||||||| ||||||||||||| ||||| |||||||||||||||||||||||    
T  2953 atccaaacaatggaattcacctcaaa-tatttgaattccctcaaaacattacattc 2899  T

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Target: scaffold0318; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 3406 - 3358
Alignment:
Q  180 agagtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaatt 228  Q
    ||||||| ||||||||||||||||   ||||||||||||||||| ||||    
T  3406 agagtgtctttggatgaggtaattgagaaattttaaagaatttagaatt 3358  T

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Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 42071 - 42024
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  42071 aattcacctcaaagtagttgaattccctcaaaacattacattccctca 42024  T

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Target: scaffold0417 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 183 - 240
Target Start/End: Original strand, 11499 - 11556
Alignment:
Q  183 gtgtgtttggatgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||||||||| || ||||||||||||||||||| ||||||| | ||||||    
T  11499 gtgtgtttggatgaggtatttggaaaattttaaagaatttagaattctaagtaattta 11556  T

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Target: scaffold1562 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 493 - 537
Alignment:
Q  319 tcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||| || ||||||||||||||||||||||||||||    
T  493 tcacctcaaagtagttgaattccctcaaaacattacattccctca 537  T

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Target: scaffold1158 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 2100 - 2056
Alignment:
Q  319 tcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||||||| || ||||||||||||||||||||||||||||    
T  2100 tcacctcaaagtagttgaattccctcaaaacattacattccctca 2056  T

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Target: scaffold0400 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 4484 - 4544
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||||||||||| |||||||||    
T  4484 atccaaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctca 4544  T

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Target: scaffold0365 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Original strand, 5128 - 5188
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||| |||| ||||| |||| ||||||||||||| |||||||||    
T  5128 atccaaacaatggaattcaccccaaaatatttgaatttcctcaaaacattatattccctca 5188  T

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Target: scaffold0301 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 303 - 363
Target Start/End: Complemental strand, 7238 - 7178
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||||||| |||||||  |||||||||| |||||||| |||||| ||||||||||||    
T  7238 atccaaacaatggaattcactccaaagtatttgaattcccttaaaacaatacattccctca 7178  T

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Target: scaffold0301; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 7688 - 7641
Alignment:
Q  193 atgaggtaatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    |||||||||||   ||||||||||||||||| ||||||||||||||||    
T  7688 atgaggtaattgagaaattttaaagaatttagaattctaggcaattta 7641  T

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Target: scaffold0129 (Bit Score: 37; Significance: 0.000000000008; HSPs: 3)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 19280 - 19225
Alignment:
Q  307 aaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||||||| ||||||||||||| ||||| |||||| |||||||||||||||||||||    
T  19280 aaacaatggaattcacctcaaaatatttgaattcc-tcaaaacattacattccctca 19225  T

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Target: scaffold0129; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 19779 - 19831
Alignment:
Q  311 aatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    |||| ||||||||||||||||||| ||||  || |||||||||||||||||||    
T  19779 aatgtaattcacctcaaagtatttgaattttcttaaaacattacattccctca 19831  T

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Target: scaffold0129; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 240
Target Start/End: Original strand, 19326 - 19367
Alignment:
Q  199 taatttgaaaattttaaagaatttaaaattctaggcaattta 240  Q
    ||||||| ||||||||||||||||| |||| |||||||||||    
T  19326 taatttggaaattttaaagaatttagaattttaggcaattta 19367  T

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Target: scaffold0048 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 363
Target Start/End: Complemental strand, 83017 - 82970
Alignment:
Q  316 aattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||| |||||| || ||||||||||||||||||||||||||||    
T  83017 aattcaccttaaagtagttgaattccctcaaaacattacattccctca 82970  T

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Target: scaffold0014 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 303 - 357
Target Start/End: Original strand, 221182 - 221236
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacatt 357  Q
    ||||||| ||||||||||||| |||| ||||| |||||||| |||||||||||||    
T  221182 atccaaataatgaaattcaccccaaaatatttgaattcccttaaaacattacatt 221236  T

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Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 360
Target Start/End: Complemental strand, 56345 - 56304
Alignment:
Q  319 tcacctcaaagtatttaaattccctcaaaacattacattccc 360  Q
    ||||||||||||| || |||||||||||||||||||||||||    
T  56345 tcacctcaaagtagttgaattccctcaaaacattacattccc 56304  T

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Target: scaffold0044; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 306 - 363
Target Start/End: Original strand, 56349 - 56406
Alignment:
Q  306 caaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacattccctca 363  Q
    ||||||||  ||||||||| |||||| || ||||||||||||||||||| ||||||||    
T  56349 caaacaatagaattcaccttaaagtagttgaattccctcaaaacattactttccctca 56406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 356
Target Start/End: Complemental strand, 130442 - 130388
Alignment:
Q  302 catccaaacaatgaaattcacctcaaagtatttaaattccctcaaaacattacat 356  Q
    ||||||||||||  ||| ||||| ||||| ||| |||||||||||||||||||||    
T  130442 catccaaacaatagaatccacctaaaagtctttgaattccctcaaaacattacat 130388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 348
Target Start/End: Original strand, 9572 - 9617
Alignment:
Q  303 atccaaacaatgaaattcacctcaaagtatttaaattccctcaaaa 348  Q
    |||||||||||| |||| |||||||||||||| ||||| |||||||    
T  9572 atccaaacaatggaatttacctcaaagtatttgaattctctcaaaa 9617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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