View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4466_low_5 (Length: 338)

Name: NF4466_low_5
Description: NF4466
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4466_low_5
NF4466_low_5
[»] chr1 (37 HSPs)
chr1 (47-323)||(1389513-1389774)
chr1 (1-50)||(23536064-23536113)
chr1 (1-45)||(28745799-28745843)
chr1 (1-47)||(4038188-4038234)
chr1 (1-47)||(15034772-15034818)
chr1 (1-47)||(30190249-30190295)
chr1 (1-50)||(4038072-4038121)
chr1 (2-47)||(44410311-44410356)
chr1 (1-49)||(8224766-8224814)
chr1 (1-49)||(15034657-15034705)
chr1 (1-49)||(26501106-26501154)
chr1 (1-49)||(27935598-27935646)
chr1 (1-49)||(38277413-38277461)
chr1 (1-45)||(40264143-40264187)
chr1 (1-49)||(43623005-43623053)
chr1 (4-47)||(24273250-24273293)
chr1 (1-39)||(34756435-34756473)
chr1 (1-38)||(32573035-32573072)
chr1 (3-51)||(27804380-27804428)
chr1 (1-49)||(44410424-44410472)
chr1 (1-49)||(50005077-50005125)
chr1 (1-45)||(50005192-50005236)
chr1 (1-48)||(32287960-32288007)
chr1 (1-44)||(45565397-45565440)
chr1 (7-49)||(5474415-5474457)
chr1 (1-47)||(6470713-6470759)
chr1 (1-39)||(27804273-27804311)
chr1 (1-39)||(37447929-37447967)
chr1 (12-49)||(15245458-15245495)
chr1 (1-50)||(31166307-31166356)
chr1 (12-49)||(34007441-34007478)
chr1 (1-50)||(34756540-34756589)
chr1 (12-53)||(40264042-40264083)
chr1 (1-38)||(44570687-44570724)
chr1 (1-45)||(28632612-28632656)
chr1 (1-49)||(29446748-29446796)
chr1 (1-45)||(38277528-38277571)
[»] chr5 (40 HSPs)
chr5 (1-47)||(37722918-37722964)
chr5 (1-49)||(9764336-9764384)
chr5 (1-49)||(15374073-15374121)
chr5 (1-49)||(40643930-40643978)
chr5 (1-47)||(22303894-22303940)
chr5 (1-50)||(2316375-2316424)
chr5 (4-49)||(25935317-25935362)
chr5 (1-45)||(2721584-2721628)
chr5 (1-49)||(6634013-6634061)
chr5 (1-45)||(13243517-13243561)
chr5 (1-45)||(28828369-28828413)
chr5 (1-49)||(32470880-32470928)
chr5 (1-49)||(40090438-40090486)
chr5 (1-52)||(26281293-26281344)
chr5 (2-49)||(41762240-41762287)
chr5 (1-47)||(9764451-9764497)
chr5 (1-47)||(15804322-15804368)
chr5 (1-47)||(22766952-22766998)
chr5 (1-46)||(3563278-3563323)
chr5 (1-46)||(20523246-20523291)
chr5 (1-46)||(33245396-33245441)
chr5 (1-49)||(927300-927348)
chr5 (1-45)||(15804407-15804451)
chr5 (1-49)||(23092075-23092123)
chr5 (1-45)||(28828460-28828504)
chr5 (2-49)||(5658774-5658821)
chr5 (4-39)||(9894349-9894384)
chr5 (4-39)||(37145528-37145563)
chr5 (1-47)||(15373960-15374006)
chr5 (12-54)||(22305105-22305147)
chr5 (1-31)||(23091978-23092008)
chr5 (12-49)||(2550326-2550363)
chr5 (4-45)||(19533934-19533975)
chr5 (1-37)||(13243469-13243505)
chr5 (1-49)||(16515131-16515179)
chr5 (7-47)||(20523133-20523173)
chr5 (1-49)||(32250122-32250169)
chr5 (1-49)||(32390085-32390133)
chr5 (9-49)||(34982214-34982254)
chr5 (1-49)||(40809339-40809387)
[»] chr4 (33 HSPs)
chr4 (1-47)||(1107165-1107211)
chr4 (1-50)||(41498603-41498652)
chr4 (1-47)||(2125857-2125903)
chr4 (1-47)||(4896648-4896694)
chr4 (1-47)||(10128087-10128133)
chr4 (1-47)||(11348350-11348396)
chr4 (1-47)||(49111425-49111471)
chr4 (1-54)||(4896745-4896798)
chr4 (1-54)||(16516164-16516217)
chr4 (1-45)||(7352814-7352858)
chr4 (1-49)||(7352925-7352973)
chr4 (1-49)||(15660181-15660229)
chr4 (4-47)||(31473849-31473892)
chr4 (1-48)||(31742877-31742924)
chr4 (1-47)||(857352-857398)
chr4 (3-49)||(1112603-1112649)
chr4 (1-47)||(11040968-11041013)
chr4 (1-47)||(14982280-14982326)
chr4 (1-47)||(15660296-15660342)
chr4 (1-47)||(36455907-36455953)
chr4 (1-46)||(4441338-4441383)
chr4 (1-50)||(10127971-10128020)
chr4 (4-44)||(10633035-10633075)
chr4 (1-45)||(26250911-26250955)
chr4 (1-49)||(36456039-36456087)
chr4 (1-45)||(42542980-42543024)
chr4 (1-45)||(42844656-42844700)
chr4 (1-39)||(1539649-1539687)
chr4 (1-47)||(28845984-28846030)
chr4 (12-49)||(14982385-14982422)
chr4 (1-45)||(19461763-19461807)
chr4 (3-39)||(28845879-28845915)
chr4 (1-49)||(42844541-42844589)
[»] chr7 (29 HSPs)
chr7 (1-50)||(40110734-40110783)
chr7 (1-49)||(43955515-43955563)
chr7 (1-47)||(2057508-2057554)
chr7 (1-47)||(34398962-34399008)
chr7 (1-50)||(29195706-29195755)
chr7 (4-49)||(31632720-31632765)
chr7 (1-49)||(2057393-2057441)
chr7 (2-50)||(39342656-39342704)
chr7 (1-45)||(43955627-43955671)
chr7 (2-49)||(14603276-14603323)
chr7 (4-47)||(26162153-26162196)
chr7 (1-47)||(6498778-6498824)
chr7 (1-47)||(28539181-28539227)
chr7 (4-54)||(29639231-29639281)
chr7 (1-50)||(29065816-29065865)
chr7 (2-47)||(35455804-35455849)
chr7 (4-49)||(35776971-35777016)
chr7 (1-49)||(5644675-5644723)
chr7 (1-49)||(21635883-21635931)
chr7 (1-49)||(40110851-40110899)
chr7 (1-47)||(5644790-5644836)
chr7 (1-39)||(21635998-21636036)
chr7 (1-47)||(23548624-23548670)
chr7 (12-50)||(31913233-31913271)
chr7 (1-46)||(9784944-9784989)
chr7 (2-39)||(30629065-30629102)
chr7 (4-49)||(34388263-34388308)
chr7 (1-49)||(40854083-40854131)
chr7 (1-49)||(44915193-44915241)
[»] chr2 (26 HSPs)
chr2 (1-50)||(14365697-14365746)
chr2 (1-56)||(3092273-3092328)
chr2 (1-48)||(14537198-14537245)
chr2 (1-52)||(27033485-27033536)
chr2 (1-47)||(784906-784952)
chr2 (1-47)||(41461628-41461674)
chr2 (241-310)||(4747164-4747232)
chr2 (4-49)||(10480117-10480162)
chr2 (4-45)||(11793897-11793938)
chr2 (1-50)||(17180294-17180343)
chr2 (2-50)||(769033-769081)
chr2 (2-50)||(11141302-11141350)
chr2 (1-45)||(11532280-11532324)
chr2 (1-49)||(11684597-11684645)
chr2 (1-41)||(30698287-30698327)
chr2 (2-49)||(33189285-33189332)
chr2 (1-39)||(11716512-11716550)
chr2 (1-47)||(14365812-14365858)
chr2 (2-47)||(1583837-1583882)
chr2 (1-50)||(7228039-7228088)
chr2 (1-54)||(41461508-41461561)
chr2 (1-47)||(10244177-10244223)
chr2 (1-47)||(11716408-11716454)
chr2 (2-47)||(35047707-35047752)
chr2 (1-49)||(784791-784839)
chr2 (1-45)||(44256220-44256263)
[»] chr3 (29 HSPs)
chr3 (1-49)||(42005979-42006027)
chr3 (1-49)||(44436256-44436304)
chr3 (1-49)||(49457341-49457389)
chr3 (1-48)||(5415782-5415829)
chr3 (1-52)||(46672829-46672880)
chr3 (1-47)||(5415896-5415942)
chr3 (1-47)||(37321550-37321596)
chr3 (1-47)||(47767432-47767478)
chr3 (1-50)||(9129341-9129390)
chr3 (1-50)||(9129457-9129506)
chr3 (1-50)||(9137448-9137497)
chr3 (1-50)||(9137564-9137613)
chr3 (1-49)||(27252007-27252055)
chr3 (1-49)||(35279928-35279976)
chr3 (1-49)||(44692935-44692983)
chr3 (1-51)||(7302342-7302392)
chr3 (1-47)||(36398015-36398061)
chr3 (1-47)||(37054394-37054440)
chr3 (1-47)||(44692822-44692868)
chr3 (3-49)||(46001362-46001408)
chr3 (1-47)||(46429509-46429555)
chr3 (1-49)||(671645-671693)
chr3 (4-47)||(30767104-30767147)
chr3 (2-49)||(53129870-53129917)
chr3 (1-39)||(21307558-21307596)
chr3 (1-47)||(47284339-47284385)
chr3 (4-40)||(19475823-19475859)
chr3 (1-49)||(34088569-34088617)
chr3 (1-45)||(42130694-42130738)
[»] chr8 (30 HSPs)
chr8 (1-56)||(32626071-32626126)
chr8 (1-47)||(3853616-3853662)
chr8 (1-47)||(3858074-3858120)
chr8 (1-47)||(14800073-14800119)
chr8 (1-50)||(4156280-4156329)
chr8 (1-50)||(14991689-14991738)
chr8 (1-50)||(42711393-42711442)
chr8 (1-49)||(17110867-17110915)
chr8 (2-50)||(27322687-27322735)
chr8 (1-57)||(28324699-28324755)
chr8 (2-49)||(36103099-36103146)
chr8 (1-47)||(24044960-24045006)
chr8 (1-47)||(33902667-33902713)
chr8 (1-47)||(37268120-37268166)
chr8 (2-47)||(29257389-29257434)
chr8 (1-45)||(13404829-13404873)
chr8 (1-49)||(33377334-33377382)
chr8 (1-49)||(40046802-40046850)
chr8 (3-45)||(3853731-3853773)
chr8 (3-45)||(3858189-3858231)
chr8 (4-50)||(11744759-11744805)
chr8 (1-47)||(17110982-17111028)
chr8 (1-47)||(44889354-44889400)
chr8 (2-47)||(515570-515615)
chr8 (12-49)||(14799977-14800014)
chr8 (4-49)||(23011732-23011777)
chr8 (2-39)||(44346716-44346753)
chr8 (1-37)||(13404940-13404976)
chr8 (1-45)||(29482844-29482888)
chr8 (1-49)||(33986002-33986050)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-51)||(42091-42141)
scaffold0009 (1-47)||(41997-42043)
[»] chr6 (12 HSPs)
chr6 (1-47)||(9285647-9285693)
chr6 (1-50)||(9763125-9763174)
chr6 (1-49)||(6919820-6919868)
chr6 (2-49)||(28918163-28918210)
chr6 (1-47)||(34245007-34245053)
chr6 (1-49)||(8574778-8574826)
chr6 (7-47)||(33733432-33733472)
chr6 (1-47)||(8574695-8574741)
chr6 (1-47)||(29889461-29889507)
chr6 (1-49)||(776193-776241)
chr6 (1-45)||(6919710-6919754)
chr6 (1-45)||(9763014-9763058)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-49)||(403-451)
scaffold1562 (1-45)||(518-562)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-45)||(2031-2075)
scaffold1158 (1-49)||(2142-2190)
[»] scaffold0129 (1 HSPs)
scaffold0129 (1-45)||(19200-19244)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-45)||(82945-82989)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-39)||(56387-56425)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-46)||(4525-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-46)||(5169-5214)
[»] scaffold0337 (1 HSPs)
scaffold0337 (6-54)||(15896-15943)
[»] scaffold0065 (1 HSPs)
scaffold0065 (6-54)||(2938-2985)


Alignment Details
Target: chr1 (Bit Score: 173; Significance: 5e-93; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 47 - 323
Target Start/End: Original strand, 1389513 - 1389774
Alignment:
Q  47 ttaaagaaatagaaaaatgtgattctcacttagcttcagcgccaagaaaatctaatatgtagtgtttttnnnnnnntaaaattaattctagaatatcaat 146  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||        || ||||||||||||||||||||    
T  1389513 ttaaagaaatagaaaaatgtgattctcacttagcttcagcaccaagaaaatctaatatgtagtgtttttaaaaaaaaaatattaattctagaatatcaat 1389612  T
Q  147 tatacactaatgggatgtttttagatgaaaaattttgtcaaaatatcccagtcaattgtttcagagttaatagcagttttaccacatacaatacaacaag 246  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||     || |||||||    
T  1389613 tatacactaatgggatgtttttagatgaaaaaatttgtcaaaatatcccagtcaattgtttcagagttaatagcagttttaccac-----atgcaacaag 1389707  T
Q  247 ggtttaacatgttggaaaataaaggcatgagtcttgttgatgtcaccactctaaggcattacataatgatttatttt 323  Q
    ||||||||||||||||          |||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  1389708 ggtttaacatgttgga----------atgagtcttgttgatgtcaccactctcaggcattacatattgatttatttt 1389774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 23536113 - 23536064
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  23536113 caaaacattacattccctcaaaacattcccccatccaaacacactcttaa 23536064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28745843 - 28745799
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||| ||||||||||||||||||||||||||||||||||||||||    
T  28745843 caaaccattacattccctcaaaatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4038188 - 4038234
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  4038188 caaaacattactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15034772 - 15034818
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  15034772 caaaacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30190249 - 30190295
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  30190249 caaaacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4038121 - 4038072
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||| ||||||||| ||||| ||||||||||    
T  4038121 caaaacattacattccctcaaaacattcccccacccaaacacactcttaa 4038072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 44410356 - 44410311
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  44410356 aaaacattacattccctcaaaacattctcccatccaaatacactct 44410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8224814 - 8224766
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||||    
T  8224814 caaaacattacattccctcaaaacattccctcatccaaacacactctta 8224766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15034705 - 15034657
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  15034705 caaaacattacattccctcaaaacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 26501106 - 26501154
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  26501106 caaaacattacattccctcaaaacattcctccatccaaacacactctta 26501154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27935598 - 27935646
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||    
T  27935598 caaaacattacattccctcaaaatatttctccatccaaacacactctta 27935646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38277461 - 38277413
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||||||||||||| | |||||||| |||||||||    
T  38277461 caaaacattacattccctcaaaatattctctcatccaaacacactctta 38277413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 40264143 - 40264187
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  40264143 caaaacattacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43623005 - 43623053
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||| |||||| ||||||||||||||| |||||||||    
T  43623005 caaaacattacattccatcaaaacattcccccatccaaacacactctta 43623053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 24273250 - 24273293
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  24273250 aacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 34756473 - 34756435
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaa 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  34756473 caaaacattacattccctcaaaacattcccccatccaaa 34756435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32573035 - 32573072
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaa 38  Q
    |||||||||||||| |||||||||||||||||||||||    
T  32573035 caaaacattacattacctcaaaatattcccccatccaa 32573072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 27804380 - 27804428
Alignment:
Q  3 aaacattacattccctcaaaatattcccccatccaaatacactcttaaa 51  Q
    |||||||||||| |||||||| ||||| ||||||||| |||||||||||    
T  27804380 aaacattacatttcctcaaaacattcctccatccaaacacactcttaaa 27804428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44410424 - 44410472
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||| ||||||| |||||||||||||||| ||||||| |||||||||    
T  44410424 caaaactttacattacctcaaaatattccccaatccaaacacactctta 44410472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50005125 - 50005077
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||| |||||||||||||  |||||||| |||||||||    
T  50005125 caaaacattacattctctcaaaatattccgtcatccaaacacactctta 50005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 50005192 - 50005236
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||| |||||||||||||| ||||||||| |||||    
T  50005192 caaaacattacattacctcaaaatattcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32287960 - 32288007
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctt 48  Q
    |||||||||||||||||||||||  |||| ||||||||| ||||||||    
T  32287960 caaaacattacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 45565440 - 45565397
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacac 44  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||    
T  45565440 caaaacattacattctctcaaaacattcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 5474457 - 5474415
Alignment:
Q  7 attacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||| |||||||||||| ||||||||||||||| |||||||||    
T  5474457 attaaattccctcaaaacattcccccatccaaacacactctta 5474415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6470713 - 6470759
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||| ||||||| ||||| ||||||||| |||||||    
T  6470713 caaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 27804311 - 27804273
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaa 39  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  27804311 caaaatattacattccctcaaaacattcccccatccaaa 27804273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37447929 - 37447967
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaa 39  Q
    ||||||||||||||||||| ||||||||||| |||||||    
T  37447929 caaaacattacattccctccaaatattcccctatccaaa 37447967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 15245495 - 15245458
Alignment:
Q  12 attccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  15245495 attccctcaaaacattcccccatccaaacacactctta 15245458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 31166356 - 31166307
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||  ||||||| |||||| |||||||| ||||||||||    
T  31166356 caaaacattacattatctcaaaacattccctcatccaaacacactcttaa 31166307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 34007441 - 34007478
Alignment:
Q  12 attccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  34007441 attccctcaaaatatttccccatccaaacacactctta 34007478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34756540 - 34756589
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||||||| ||| |||||||||||| ||||||||||| ||||| ||||    
T  34756540 caaaacattatattacctcaaaatatttccccatccaaacacactattaa 34756589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 40264083 - 40264042
Alignment:
Q  12 attccctcaaaatattcccccatccaaatacactcttaaaga 53  Q
    |||||||||||| ||||||| ||||||| |||||||||||||    
T  40264083 attccctcaaaacattcccctatccaaacacactcttaaaga 40264042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44570724 - 44570687
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaa 38  Q
    ||||||||||||||||||||||| |||| |||||||||    
T  44570724 caaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28632612 - 28632656
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||| ||| |||||| |||||||| |||||    
T  28632612 caaaacattacattccctccaaacattccctcatccaaacacact 28632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29446796 - 29446748
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||| |||||| |||||||| | |||| |||||||||    
T  29446796 caaaacattacattccttcaaaacattcccccgttcaaacacactctta 29446748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38277528 - 38277571
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||    
T  38277528 caaaacattacattacctcaaaatatt-ccccatccaaacacact 38277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37722918 - 37722964
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  37722918 caaaacattacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9764384 - 9764336
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  9764384 caaaacattactttccctcaaaatattcccccatccaaacacactctta 9764336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15374073 - 15374121
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  15374073 caaaacattacattccctcaaaacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40643930 - 40643978
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  40643930 caaaacattacattccctcaaaacattcccccatccaaacacactctta 40643978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 22303894 - 22303940
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  22303894 caaaacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2316424 - 2316375
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||| ||||||||||||||||| ||||||||||||||| ||||||||||    
T  2316424 caaaatattacattccctcaaaacattcccccatccaaacacactcttaa 2316375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 25935317 - 25935362
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||    
T  25935317 aacattacattccctcaaaacattcccccatccaaacacactctta 25935362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 2721584 - 2721628
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  2721584 caaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6634061 - 6634013
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||| ||||||||||| |||||||||||| |||||||||    
T  6634061 caaaacattacattacctcaaaatatccccccatccaaacacactctta 6634013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13243517 - 13243561
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  13243517 caaaacattacattacctcaaaatattcccccatccaaacacact 13243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 28828413 - 28828369
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  28828413 caaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 32470928 - 32470880
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||| | |||||||||||||||||||    
T  32470928 caaaacattacattccctcaaaacatttctccatccaaatacactctta 32470880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40090438 - 40090486
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||| |||||||| ||||||||||||||| |||||||||    
T  40090438 caaaacattacatttcctcaaaacattcccccatccaaacacactctta 40090486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 26281293 - 26281344
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaag 52  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||| ||||    
T  26281293 caaaacattacattccctcaaaacgttcccccatccaaacacactctaaaag 26281344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 41762240 - 41762287
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  41762240 aaaacaatacattccctcaaaacattcccccatccaaacacactctta 41762287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9764451 - 9764497
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||    
T  9764451 caaaacattacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15804368 - 15804322
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  15804368 caaaacactacattccctcaaaacattcccccatccaaacacactct 15804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22766998 - 22766952
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||    
T  22766998 caaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3563323 - 3563278
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactc 46  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||    
T  3563323 caaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20523246 - 20523291
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactc 46  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||    
T  20523246 caaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33245396 - 33245441
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactc 46  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||    
T  33245396 caaaacattacattccatcaaaacattcccccatccaaacacactc 33245441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 927348 - 927300
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||| ||||||||||||||| ||| ||||||||||| |||||||||    
T  927348 caaaacaatacattccctcaaaacatttccccatccaaacacactctta 927300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15804407 - 15804451
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  15804407 caaaacattacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23092075 - 23092123
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||  |||||| ||||||||||||||| |||||||||    
T  23092075 caaaacattacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28828460 - 28828504
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||    
T  28828460 caaaacattacattacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 5658821 - 5658774
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||||||| ||| | ||||||||| |||||||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacacactctta 5658774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 9894349 - 9894384
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaa 39  Q
    |||||||||||||||||||| |||||||||||||||    
T  9894349 aacattacattccctcaaaacattcccccatccaaa 9894384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 39
Target Start/End: Original strand, 37145528 - 37145563
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaa 39  Q
    |||||||||||||||||||| |||||||||||||||    
T  37145528 aacattacattccctcaaaacattcccccatccaaa 37145563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15374006 - 15373960
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||  ||||||||| |||||||    
T  15374006 caaaacattacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 22305147 - 22305105
Alignment:
Q  12 attccctcaaaatattcccccatccaaatacactcttaaagaa 54  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||    
T  22305147 attccctcaaaacattcccccatccaaacacactcttagagaa 22305105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 31
Target Start/End: Complemental strand, 23092008 - 23091978
Alignment:
Q  1 caaaacattacattccctcaaaatattcccc 31  Q
    |||||||||||||||||||||||||||||||    
T  23092008 caaaacattacattccctcaaaatattcccc 23091978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 2550363 - 2550326
Alignment:
Q  12 attccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  2550363 attccctcaaaacattcccccatccaaacacactctta 2550326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 19533934 - 19533975
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||||||||| ||||| ||||||||| |||||    
T  19533934 aacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 13243505 - 13243469
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatcca 37  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  13243505 caaaacattacattccctcaaaacattccctcatcca 13243469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16515131 - 16515179
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||| |||| |||| | |||||||| |||||||||    
T  16515131 caaaacattacattccctaaaaacattctctcatccaaacacactctta 16515179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 20523173 - 20523133
Alignment:
Q  7 attacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||| |||| |||||||||| |||||||    
T  20523173 attacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32250122 - 32250169
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||| ||||||||||| ||| ||||||||||| |||||||||    
T  32250122 caaaacattactttccctcaaaacatt-ccccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32390085 - 32390133
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| |||| |  ||||||| |||||||||    
T  32390085 caaaacattacattccctcaaaaaattctctaatccaaacacactctta 32390133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 49
Target Start/End: Complemental strand, 34982254 - 34982214
Alignment:
Q  9 tacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||| ||||||| ||||||| |||||||||    
T  34982254 tacattccctcaaaacattcccctatccaaacacactctta 34982214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40809387 - 40809339
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||| |||| ||||||| ||| ||||||||||| |||||||||    
T  40809387 caaaacattatattctctcaaaacatttccccatccaaacacactctta 40809339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1107165 - 1107211
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  1107165 caaaacattatattccctcaaaatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41498603 - 41498652
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  41498603 caaaacattacattccctcaaaatattcctccatccaaacacactcttaa 41498652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2125903 - 2125857
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  2125903 caaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4896694 - 4896648
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||    
T  4896694 caaaacattacattacctcaaaatattcccccatccaaacacactct 4896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10128087 - 10128133
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  10128087 caaaacattacattctctcaaaacattcccccatccaaatacactct 10128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11348350 - 11348396
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||    
T  11348350 caaaacattacattcccttaaaacattcccccatccaaatacactct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 49111425 - 49111471
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  49111425 caaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 4896745 - 4896798
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaagaa 54  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||| ||| ||||    
T  4896745 caaaacattacattccctcaaaatatttccccatccaaacacactattagagaa 4896798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 16516217 - 16516164
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaagaa 54  Q
    |||||||||||||||| |||||| ||||||||||||||| ||||||| ||||||    
T  16516217 caaaacattacattccgtcaaaacattcccccatccaaacacactctaaaagaa 16516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7352858 - 7352814
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  7352858 caaaacattacattccctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7352925 - 7352973
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  7352925 caaaacattacattccctcaaaacatttccccatccaaacacactctta 7352973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15660229 - 15660181
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||||||    
T  15660229 caaaacattacattacctcaaaatattcccctatccaaacacactctta 15660181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 31473892 - 31473849
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  31473892 aacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 31742877 - 31742924
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctt 48  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  31742877 caaaacattacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 857352 - 857398
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||    
T  857352 caaaacattacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 1112649 - 1112603
Alignment:
Q  3 aaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||| |||||||| ||||||||||||||| |||||||||    
T  1112649 aaacattacatttcctcaaaacattcccccatccaaacacactctta 1112603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11041013 - 11040968
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||    
T  11041013 caaaacattacattccctcaaaatatt-ccccatccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14982326 - 14982280
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  14982326 caaaacattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15660296 - 15660342
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||    
T  15660296 caaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36455953 - 36455907
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||    
T  36455953 caaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 4441383 - 4441338
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactc 46  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  4441383 caaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10128020 - 10127971
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||||||||||| | |||||||||||||||||||||| ||||| ||||    
T  10128020 caaaacattacattacttcaaaatattcccccatccaaacacactattaa 10127971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 10633075 - 10633035
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacac 44  Q
    |||||||||||||||||||| ||||||||||||||| ||||    
T  10633075 aacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 26250955 - 26250911
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||    
T  26250955 caaaacattacattacctcaaaatattccctcatccaaacacact 26250911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36456039 - 36456087
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||| ||||||||||||||||| ||||| ||||||||| |||||||||    
T  36456039 caaaatattacattccctcaaaacattcctccatccaaacacactctta 36456087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42542980 - 42543024
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||    
T  42542980 caaaacattacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42844656 - 42844700
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||    
T  42844656 caaaacattacattacctcaaaatatttccccatccaaacacact 42844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1539687 - 1539649
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaa 39  Q
    ||||||||||||||||||||||| ||||| |||||||||    
T  1539687 caaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28845984 - 28846030
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||| |||||||||||| ||| ||||||||||| |||||||    
T  28845984 caaaacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 14982385 - 14982422
Alignment:
Q  12 attccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  14982385 attccctcaaaagattcccccatccaaacacactctta 14982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 19461763 - 19461807
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||| | |||||||||| ||||||||||| |||||    
T  19461763 caaaacattacattacttcaaaatatttccccatccaaaaacact 19461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Complemental strand, 28845915 - 28845879
Alignment:
Q  3 aaacattacattccctcaaaatattcccccatccaaa 39  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  28845915 aaacattacattccctcaaaacattcctccatccaaa 28845879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42844589 - 42844541
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||| ||||||||||||||||| ||||||||||| | | |||||||||    
T  42844589 caaaatattacattccctcaaaacattcccccatctatacacactctta 42844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40110783 - 40110734
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  40110783 caaaacattacattccctcaaaacattcccccatccaaacacactcttaa 40110734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43955563 - 43955515
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  43955563 caaaacattacattccctcaaaacattcccccatccaaacacactctta 43955515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2057508 - 2057554
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  2057508 caaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34398962 - 34399008
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  34398962 caaaacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29195755 - 29195706
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  29195755 caaaacattacattacctcaaaatattcctccatccaaacacactcttaa 29195706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 31632765 - 31632720
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||    
T  31632765 aacattacattccctcaaaacattcccccatccaaacacactctta 31632720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2057441 - 2057393
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||    
T  2057441 caaaacattacattcgctcaaaacattcccccatccaaacacactctta 2057393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 39342656 - 39342704
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  39342656 aaaacaatacattccctcaaaacattcccccatccaaacacactcttaa 39342704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 43955627 - 43955671
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  43955627 caaaacattacattccctcaaaacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 14603276 - 14603323
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  14603276 aaaacaatacattccctcaaaacattcccccatccaaacacactctta 14603323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 26162153 - 26162196
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||||||||| ||||||||||||||| |||||||    
T  26162153 aacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6498778 - 6498824
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  6498778 caaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28539181 - 28539227
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  28539181 caaaacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 29639231 - 29639281
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactcttaaagaa 54  Q
    ||||||||||||||| |||| ||||||||||||| | ||||||||||||||    
T  29639231 aacattacattccctgaaaacattcccccatccatacacactcttaaagaa 29639281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 29065865 - 29065816
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||| ||||  ||||||||| ||||||||||    
T  29065865 caaaacattacattccctcaaaacattcatccatccaaacacactcttaa 29065816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 35455849 - 35455804
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||    
T  35455849 aaaacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 35776971 - 35777016
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||    
T  35776971 aacattacattccctcaaaacattccctcatccaaacacactctta 35777016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5644723 - 5644675
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||| |||| |||| |||||||||    
T  5644723 caaaacattacattccctcaaaacattcctccattcaaacacactctta 5644675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21635931 - 21635883
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||| ||||||||||||| |||||||||  |||||||||    
T  21635931 caaaacattacattacctcaaaatattctcccatccaagcacactctta 21635883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40110851 - 40110899
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||| ||| ||| ||||||||||| |||||||||    
T  40110851 caaaacattacattccctcgaaacatttccccatccaaacacactctta 40110899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5644790 - 5644836
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||| ||||||||  |||||||||||||| |||||||    
T  5644790 caaaacattacattacctcaaaacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21635998 - 21636036
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaa 39  Q
    ||||||||||||||||||||||| ||| |||||||||||    
T  21635998 caaaacattacattccctcaaaacatttccccatccaaa 21636036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 23548624 - 23548670
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||| ||||||||||||||| ||||| ||||||||| |||||||    
T  23548624 caaaacaatacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 12 - 50
Target Start/End: Complemental strand, 31913271 - 31913233
Alignment:
Q  12 attccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  31913271 attccctcaaaacattcccccatccaaacacactcttaa 31913233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9784944 - 9784989
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactc 46  Q
    ||||||| ||||||||||||||| ||||| ||||||||| ||||||    
T  9784944 caaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Complemental strand, 30629102 - 30629065
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaa 39  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  30629102 aaaacaatacattccctcaaaacattcccccatccaaa 30629065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 34388308 - 34388263
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||| || |||||||||||| ||||||||||| |||||||||    
T  34388308 aacattacttttcctcaaaatatttccccatccaaacacactctta 34388263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 40854083 - 40854131
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||| |||||||||||||| || ||| ||||||||||| |||||||||    
T  40854083 caaaatattacattccctcagaacatttccccatccaaacacactctta 40854131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44915241 - 44915193
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||| ||||||||||| |||| | |||||||| |||||||||    
T  44915241 caaaacattacgttccctcaaaaaattctctcatccaaacacactctta 44915193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14365746 - 14365697
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  14365746 caaaacattacattccctcaaaacattcccccatccaaacacactcttaa 14365697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3092328 - 3092273
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaagaaat 56  Q
    ||||||| ||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  3092328 caaaacaatacattccctcaaaacattcctccatccaaatacactcttagagaaat 3092273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 14537245 - 14537198
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctt 48  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  14537245 caaaacattacattccctcaaaacattcccccatccaaacacactctt 14537198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 27033536 - 27033485
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaag 52  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  27033536 caaaacattacattctctcaaaacattcccccatccaaacacactcttaaag 27033485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 784906 - 784952
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||||| |||||||||||||||||||||| |||||||    
T  784906 caaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 41461628 - 41461674
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  41461628 caaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 310
Target Start/End: Original strand, 4747164 - 4747232
Alignment:
Q  241 aacaagggtttaacatgttggaaaataaaggcatgagtcttgttgatgtcaccactctaaggcattacat 310  Q
    |||| ||| |||||||||||||||||||||||| |||||||| ||||| ||||||||| || ||||||||    
T  4747164 aacatgggcttaacatgttggaaaataaaggca-gagtcttggtgatggcaccactctcagccattacat 4747232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 10480162 - 10480117
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||    
T  10480162 aacattacattccctcaaaacattcccccatccaaacacactctta 10480117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 11793938 - 11793897
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  11793938 aacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17180343 - 17180294
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  17180343 caaaacattacattccctcaaaacattccctcatccaaacacactcttaa 17180294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 769081 - 769033
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  769081 aaaacaatacattccctcaaaacattcccccatccaaacacactcttaa 769033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 11141350 - 11141302
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||| ||||||||||||||| ||||||||||||||| ||||||||||    
T  11141350 aaaacaatacattccctcaaaacattcccccatccaaacacactcttaa 11141302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 11532280 - 11532324
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  11532280 caaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11684645 - 11684597
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  11684645 caaaacattacattccctcaaaacattcccccatccaaacacattctta 11684597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30698327 - 30698287
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaata 41  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  30698327 caaaacattacattccctcaaaacattcccccatccaaata 30698287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 33189285 - 33189332
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||||    
T  33189285 aaaacaatacattccctcaaaacattcccccatccaaacacactctta 33189332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 11716512 - 11716550
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaa 39  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  11716512 caaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14365812 - 14365858
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  14365812 caaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 1583837 - 1583882
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||    
T  1583837 aaaacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7228039 - 7228088
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||| ||||||| ||| ||||||||||| ||||||||||    
T  7228039 caaaacattacattctctcaaaacatttccccatccaaacacactcttaa 7228088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41461561 - 41461508
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaagaa 54  Q
    |||||||||||||| |||||||||||| ||||||||||| ||||| ||| ||||    
T  41461561 caaaacattacattacctcaaaatatttccccatccaaacacactattagagaa 41461508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10244223 - 10244177
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||| |||||||| ||||||| |||||||||| |||||||    
T  10244223 caaaacattactttccctcagaatattctcccatccaaacacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11716454 - 11716408
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||  ||||||||| |||||||    
T  11716454 caaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 35047707 - 35047752
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||| |||||| |||||||| ||||||||||||||| |||||||    
T  35047707 aaaacaatacatttcctcaaaacattcccccatccaaacacactct 35047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 784839 - 784791
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| |||   ||||||||| |||||||||    
T  784839 caaaacattacattccctcaaaacatttttccatccaaacacactctta 784791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 44256220 - 44256263
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||    
T  44256220 caaaacattacattacctcaaa-tattcccccatccaaacacact 44256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42005979 - 42006027
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  42005979 caaaacattacattccctcaaaacattcccccatccaaacacactctta 42006027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 44436304 - 44436256
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  44436304 caaaacattacattccctcaaaacattcccccatccaaacacactctta 44436256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 49457389 - 49457341
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  49457389 caaaacattacattccctcaaaacattcccccatccaaacacactctta 49457341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 5415829 - 5415782
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctt 48  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  5415829 caaaacattacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 46672829 - 46672880
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaag 52  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  46672829 caaaacattacattccctcaaaacattcccccatccaaacacactctaaaag 46672880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5415896 - 5415942
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  5415896 caaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37321596 - 37321550
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||    
T  37321596 caaaacattacttttcctcaaaatattcccccatccaaatacactct 37321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 47767478 - 47767432
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  47767478 caaaacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9129390 - 9129341
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||||||    
T  9129390 caaaacattacattccctcaaaatagtctcccatccaaacacactcttaa 9129341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9129457 - 9129506
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  9129457 caaaacattacattccctcaaaacattccctcatccaaacacactcttaa 9129506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 9137497 - 9137448
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||||| || |||||||||| ||||||||||    
T  9137497 caaaacattacattccctcaaaatagtctcccatccaaacacactcttaa 9137448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9137564 - 9137613
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  9137564 caaaacattacattccctcaaaacattccctcatccaaacacactcttaa 9137613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27252007 - 27252055
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| || |||||||||||| |||||||||    
T  27252007 caaaacattacattccctcaaaacatccccccatccaaacacactctta 27252055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35279928 - 35279976
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  35279928 caaaacattacattccctcaaaacattcccccatccaaacacattctta 35279976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44692935 - 44692983
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  44692935 caaaacattacattccctcaaaacattcctccatccaaacacactctta 44692983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 7302392 - 7302342
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaa 51  Q
    ||||||||||||||| ||||||| |||||| |||||||| |||||||||||    
T  7302392 caaaacattacattctctcaaaacattccctcatccaaacacactcttaaa 7302342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 36398015 - 36398061
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  36398015 caaaacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37054440 - 37054394
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||||    
T  37054440 caaaacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44692868 - 44692822
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||    
T  44692868 caaaacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 46001408 - 46001362
Alignment:
Q  3 aaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||||    
T  46001408 aaacattacattacctcaaaatattccgccatccaaacacactctta 46001362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 46429509 - 46429555
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||    
T  46429509 caaaacattacattacctcaaaatattccctcatccaaacacactct 46429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 671645 - 671693
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||| ||||||||||||||| ||||||| ||||||| |||||||||    
T  671645 caaaacaatacattccctcaaaacattcccctatccaaaaacactctta 671693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 30767147 - 30767104
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||| |||||||||||| ||| |||||||||||||||||||    
T  30767147 aacattagattccctcaaaacattaccccatccaaatacactct 30767104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 53129870 - 53129917
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||| ||| |||||| |||||||| |||||||||    
T  53129870 aaaacattacattccctcgaaacattccctcatccaaacacactctta 53129917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 21307558 - 21307596
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaa 39  Q
    ||||||||||||||||| ||||| |||||||||||||||    
T  21307558 caaaacattacattcccgcaaaacattcccccatccaaa 21307596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 47284339 - 47284385
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||| ||||||||||||| | |||||||| |||||||    
T  47284339 caaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 19475859 - 19475823
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaat 40  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  19475859 aacattacattccctcaaaacattcctccatccaaat 19475823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34088617 - 34088569
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||| ||||||||||||||| ||| | ||||||||| |||||||||    
T  34088617 caaaacaatacattccctcaaaacatttctccatccaaacacactctta 34088569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 42130738 - 42130694
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||  |||||||||||||||||| ||||| |||||    
T  42130738 caaaacattacatcacctcaaaatattcccccacccaaacacact 42130694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32626071 - 32626126
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaagaaat 56  Q
    ||||||||||||||||||||||| ||||||||||||||  ||||||||| ||||||    
T  32626071 caaaacattacattccctcaaaagattcccccatccaagcacactcttagagaaat 32626126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3853662 - 3853616
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  3853662 caaaacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3858120 - 3858074
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  3858120 caaaacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14800073 - 14800119
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||    
T  14800073 caaaacattactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4156280 - 4156329
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  4156280 caaaacattacattccctcaaaatattctcccatccaaacacactattaa 4156329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 14991738 - 14991689
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||||||||||| |||||||| ||||||||||||||| ||||||||||    
T  14991738 caaaacattacattacctcaaaacattcccccatccaaacacactcttaa 14991689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 42711393 - 42711442
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  42711393 caaaacattacattccctcaaaacattccccaatccaaacacactcttaa 42711442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17110915 - 17110867
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||| ||||||||||| |||||||||    
T  17110915 caaaacattacattccctcaaaacatttccccatccaaacacactctta 17110867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 27322687 - 27322735
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  27322687 aaaacattacattccctcaaaacattctcccatccaaacacactcttaa 27322735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 28324699 - 28324755
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaagaaata 57  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||| | |||||||    
T  28324699 caaaacattacattccctcaaaacattcctccatccaaacacactctaagagaaata 28324755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 36103146 - 36103099
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  36103146 aaaacattacattccctcaaaacattcctccatccaaacacactctta 36103099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24045006 - 24044960
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| |||||| |||||||| |||||||    
T  24045006 caaaacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33902713 - 33902667
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  33902713 caaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37268120 - 37268166
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||||    
T  37268120 caaaacattacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 29257389 - 29257434
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||||    
T  29257389 aaaacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 13404873 - 13404829
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||||| |||||||||||| ||||||||||| |||||    
T  13404873 caaaacattacattacctcaaaatatttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 33377334 - 33377382
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||| || |||||||||||| ||||||||||||||| |||||||||    
T  33377334 caaaacaatatattccctcaaaacattcccccatccaaacacactctta 33377382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40046850 - 40046802
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| ||||  ||||||||| |||||||||    
T  40046850 caaaacattacattccctcaaaacattcatccatccaaacacactctta 40046802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 3853731 - 3853773
Alignment:
Q  3 aaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||| |||||||||||| ||||||||||| |||||    
T  3853731 aaacattacattacctcaaaatatttccccatccaaacacact 3853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 3858189 - 3858231
Alignment:
Q  3 aaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    |||||||||||| |||||||||||| ||||||||||| |||||    
T  3858189 aaacattacattacctcaaaatatttccccatccaaacacact 3858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 11744759 - 11744805
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||||||||||||| |||||||| | |||||||| ||||||||||    
T  11744759 aacattacattccctctaaatattctctcatccaaacacactcttaa 11744805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 17110982 - 17111028
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||| | ||||||||| |||||||    
T  17110982 caaaacattacattccctcaaaacatttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44889400 - 44889354
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||| |||||||||||| ||||| ||||||||| |||||||    
T  44889400 caaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 515570 - 515615
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||| |||||| ||||| ||||||||| |||||||    
T  515570 aaaacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 49
Target Start/End: Complemental strand, 14800014 - 14799977
Alignment:
Q  12 attccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  14800014 attccctcaaaacattcccccatccaaacacactctta 14799977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 23011777 - 23011732
Alignment:
Q  4 aacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||||| |||| ||| |||||| |||||||||    
T  23011777 aacattacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 44346716 - 44346753
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaa 39  Q
    |||||| ||||||||||||||| |||||||||||||||    
T  44346716 aaaacaatacattccctcaaaacattcccccatccaaa 44346753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13404940 - 13404976
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatcca 37  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  13404940 caaaacattacattccctcaaaacattcccctatcca 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29482844 - 29482888
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||| ||| ||||||||||| ||||||||||||||| |||||    
T  29482844 caaaacaatacgttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33986050 - 33986002
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||| | |||| | ||||||||||||||| |||||||||    
T  33986050 caaaacattacattacttcaagacattcccccatccaaacacactctta 33986002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 42091 - 42141
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaaa 51  Q
    |||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  42091 caaaacattacattccctcaaaacgttcccccatccaaacacactcttaaa 42141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42043 - 41997
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||| |||| |||| |||||||    
T  42043 caaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9285693 - 9285647
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  9285693 caaaacattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9763125 - 9763174
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactcttaa 50  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||||    
T  9763125 caaaacattacattacctcaaaatattcctccatccaaacacactcttaa 9763174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6919820 - 6919868
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  6919820 caaaacattactttccctcaaaacattcccccatccaaacacactctta 6919868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 28918210 - 28918163
Alignment:
Q  2 aaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    |||||||||||||||||||||| ||||| ||||||||| |||||||||    
T  28918210 aaaacattacattccctcaaaacattcctccatccaaacacactctta 28918163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34245007 - 34245053
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||||||||| ||||| ||||||||| |||||||    
T  34245007 caaaacattacattccctcaaaacattcctccatccaaacacactct 34245053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8574778 - 8574826
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||| ||||||| ||| ||||||||||| |||||||||    
T  8574778 caaaacattacattcactcaaaacatttccccatccaaacacactctta 8574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  7 attacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8574741 - 8574695
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    ||||||||||||||| ||||||| ||| ||||||||||| |||||||    
T  8574741 caaaacattacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29889461 - 29889507
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactct 47  Q
    |||||||||||||||| |||||| ||||| ||||||||| |||||||    
T  29889461 caaaacattacattccatcaaaacattcctccatccaaacacactct 29889507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 776193 - 776241
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||||||||||||||| |||  || ||||||| |||||||||    
T  776193 caaaacattacattccctcaaaacattttcctatccaaacacactctta 776241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 6919754 - 6919710
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||  ||||| ||||||||| |||||    
T  6919754 caaaacattacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9763058 - 9763014
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||| ||| |||| |||||| |||||    
T  9763058 caaaacattacattccctcaaaacatttccccttccaaacacact 9763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 451 - 403
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  451 caaaacattattttccctcaaaatattcccccatccaaacacactctta 403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 518 - 562
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  518 caaaacattacattccctcaaaacattcccccatccaaacacact 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 37; Significance: 0.000000000008; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 2075 - 2031
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  2075 caaaacattacattccctcaaaacattcccccatccaaacacact 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2142 - 2190
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactctta 49  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||    
T  2142 caaaacattattttccctcaaaatattcccccatccaaacacactctta 2190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19244 - 19200
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||    
T  19244 caaaacattacattccctcaaaatactcccccatccaaacacact 19200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 82989 - 82945
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacact 45  Q
    ||||||||||||||||||||||| |||| |||||||||| |||||    
T  82989 caaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 56387 - 56425
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaa 39  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  56387 caaaacattactttccctcaaaatattccctcatccaaa 56425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4525 - 4570
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactc 46  Q
    |||||||||| |||||||||||| |||||| |||||||| ||||||    
T  4525 caaaacattatattccctcaaaacattccctcatccaaacacactc 4570  T

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Target: scaffold0365 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5169 - 5214
Alignment:
Q  1 caaaacattacattccctcaaaatattcccccatccaaatacactc 46  Q
    |||||||||| |||||||||||| |||||| |||||||| ||||||    
T  5169 caaaacattatattccctcaaaacattccctcatccaaacacactc 5214  T

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Target: scaffold0337 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 15896 - 15943
Alignment:
Q  6 cattacattccctcaaaatattcccccatccaaatacactcttaaagaa 54  Q
    |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  15896 cattacattccc-caaaacaatcccccatccaaacacactcttaaagaa 15943  T

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Target: scaffold0065 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 2938 - 2985
Alignment:
Q  6 cattacattccctcaaaatattcccccatccaaatacactcttaaagaa 54  Q
    |||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  2938 cattacattccc-caaaacaatcccccatccaaacacactcttaaagaa 2985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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