View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4467_high_1 (Length: 327)
Name: NF4467_high_1
Description: NF4467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4467_high_1 |
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Alignment Details
Target: chr5 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 4 - 312
Target Start/End: Original strand, 2820174 - 2820482
Alignment:
| Q |
4 |
aggctagaatgtatttctcactcacagaccacgcgtatccttcaatataaactttgtatctgatatcaaggaaaatcaaatacatatatatacatattat |
103 |
Q |
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| T |
2820174 |
aggctagaatgtatttctcactcacagaccacgcgtatccttcaatataaactttgtatctgatatcaaggaaaatcaaatacatacatatacatattat |
2820273 |
T |
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| Q |
104 |
attaatttaaatgtacatgatgaattttgggataaaaaataaaacatatgtgatctgagattaaatggaactacctatatgtacattggtctgccaagtt |
203 |
Q |
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| T |
2820274 |
attaatttaaatgtagatgatgaattttgggataaaaaataaaacatatgtgatctgagattaaatggaactacctatatgtacattggtctgccaagtt |
2820373 |
T |
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| Q |
204 |
tgagtgattgaatccttgttcagactctttaatccaatcctacatatttgtgacaaaatatcatcattttgtatactgatatgtgttataacttatcaga |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2820374 |
tgagtgattgaatccttgttcagactctttaatccaatcctacatatttgtgacaaaatatcatcattttgtatactgatatgtgttataacttatcaga |
2820473 |
T |
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| Q |
304 |
aagccttta |
312 |
Q |
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||||||||| |
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| T |
2820474 |
aagccttta |
2820482 |
T |
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