View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4467_high_5 (Length: 238)
Name: NF4467_high_5
Description: NF4467
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4467_high_5 |
 | |
|
| [»] chr3 (2 HSPs) |
| |
|
| [»] chr1 (2 HSPs) |
| |
|
| [»] chr2 (1 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 238
Target Start/End: Complemental strand, 25915559 - 25915339
Alignment:
| Q |
18 |
attctgactatgaatttgataatgttagtaagattactgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgct |
117 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25915559 |
attctgactatgaatttgataatgttagtaagattactgttgagcaatatgtgattgtttcgcttgatctgtccactgagtcatacactcagttgttgct |
25915460 |
T |
|
| Q |
118 |
gcctcggggttttgacgaagtgccacgtgttcatccaacaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgtt |
217 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25915459 |
gcctcggggttttgacgaggtgccacgtgttcagccaacaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgtt |
25915360 |
T |
|
| Q |
218 |
atatggaaaatgaaggatttt |
238 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
25915359 |
atatggaaaatgaaggatttt |
25915339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 26 - 238
Target Start/End: Complemental strand, 25901533 - 25901321
Alignment:
| Q |
26 |
tatgaatttgataatgttagtaagattactgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggg |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
25901533 |
tatgaatttgataatgttagtaagattactgttgagcaatatgtgattgtttcgcttgatctgtccactgagtcatacactcagttgttgctacctcggg |
25901434 |
T |
|
| Q |
126 |
gttttgacgaagtgccacgtgttcatccaacaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaa |
225 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25901433 |
gttttgacgaggtgccacgtgttcagccaacaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaa |
25901334 |
T |
|
| Q |
226 |
aatgaaggatttt |
238 |
Q |
| |
|
||||||||||||| |
|
|
| T |
25901333 |
aatgaaggatttt |
25901321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 101; Significance: 3e-50; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 10571538 - 10571326
Alignment:
| Q |
18 |
attctgactatgaatttgataatgttagtaagattactgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgct |
117 |
Q |
| |
|
||||||| |||||| ||| ||||||||||| ||||||||||||||||||||||| |||||||||||||| || ||||||||||||||| | |||||||| |
|
|
| T |
10571538 |
attctgattatgaaattggtaatgttagtagtattactgttgagcaatatgtgattgtttcacttgatctctcaactgagtcatacactgaattgttgct |
10571439 |
T |
|
| Q |
118 |
gcctcggggttttgacgaagtgccacgtgttcatccaacaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgtt |
217 |
Q |
| |
|
||||||||||||||||| ||| | ||||||| ||||| |||||||||| || ||| ||||| ||| ||||||||||||||||||| ||| ||||| |
|
|
| T |
10571438 |
tcctcggggttttgacgaggtgtcttgtgttcaaccaacgcttgtggttttaatcaactgtctttgcttttgtcatgatttcaagggaagtcatcttgtt |
10571339 |
T |
|
| Q |
218 |
atatggaaaatga |
230 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10571338 |
ttatggaaaatga |
10571326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 230
Target Start/End: Complemental strand, 10553808 - 10553596
Alignment:
| Q |
18 |
attctgactatgaatttgataatgttagtaagattactgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgct |
117 |
Q |
| |
|
||||||| |||||| ||| ||||||||| || |||| ||||| |||||||| ||| |||||||||||||| || ||||||||||||||| | |||||||| |
|
|
| T |
10553808 |
attctgattatgaaattggtaatgttagcaatattagtgttgcgcaatatgggattgtttcacttgatctctcaactgagtcatacactgaattgttgct |
10553709 |
T |
|
| Q |
118 |
gcctcggggttttgacgaagtgccacgtgttcatccaacaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgtt |
217 |
Q |
| |
|
|| |||||||||||| | ||| | |||||||| ||||| |||||| |||||| | | ||||| ||| ||||||||||||||||||||||| ||||| |
|
|
| T |
10553708 |
tccccggggttttgacaaggtgtctcgtgttcagccaacgcttgtgggtttgatcaattgtctttgcttttgtcatgatttcaagggaagccatcttgtt |
10553609 |
T |
|
| Q |
218 |
atatggaaaatga |
230 |
Q |
| |
|
|||||||||||| |
|
|
| T |
10553608 |
ttatggaaaatga |
10553596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 222
Target Start/End: Original strand, 10460466 - 10460637
Alignment:
| Q |
51 |
ttactgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaagtgccacgtgttca |
150 |
Q |
| |
|
||||||||||| |||||||||| |||||| | ||||| ||| ||||| ||||||||||| ||||| ||||||||||||| || || ||||||||| ||| |
|
|
| T |
10460466 |
ttactgttgagaaatatgtgattgtttcattggatctctcctctgagacatacactcagctgttgttgcctcggggtttcgatgaggtgccacgttatca |
10460565 |
T |
|
| Q |
151 |
tccaacaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatg |
222 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| | ||||||| ||||||| |||||||| ||||| |
|
|
| T |
10460566 |
gccaacacttgtggttttgatggactgtctttgtttctcttatgattttaagggaactcattttgtgatatg |
10460637 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 238
Target Start/End: Original strand, 10482036 - 10482209
Alignment:
| Q |
65 |
tatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaagtgccacgtgttcatccaacaattgtgg |
164 |
Q |
| |
|
|||||||| ||||||||||||| || |||||| |||||||||| |||||||| |||||||||||| | | ||| ||||| ||| |||| ||| || |
|
|
| T |
10482036 |
tatgtgattctttcacttgatctctcaactgagacatacactcaattgttgctacctcggggttttaataaggtgtcacgtcatcaaccaaagcttgcgg |
10482135 |
T |
|
| Q |
165 |
ttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaaggatttt |
238 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| ||| || |||||||||||||| |||||||||||||| |
|
|
| T |
10482136 |
ttttgatggattgtctttgttttggtcatgattatgaggaaacttattttgttatatggcaaatgaaggatttt |
10482209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 52 - 238
Target Start/End: Original strand, 6388082 - 6388268
Alignment:
| Q |
52 |
tactgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaagtgccacgtgttcat |
151 |
Q |
| |
|
||||||| |||||| |||||| ||||||||||||| || | |||| ||||||||| || ||||| ||||||| |||||| | || |||||| ||| |
|
|
| T |
6388082 |
tactgttaagcaatgtgtgattctttcacttgatctatcaagtgagaaatacactcaatttttgcttcctcgggattttgataaggttccacgttatcag |
6388181 |
T |
|
| Q |
152 |
ccaacaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaaggatttt |
238 |
Q |
| |
|
|||| |||| |||||||||| || ||||||||| |||||||||| ||| || |||| |||||||||| |||||||||||||| |
|
|
| T |
6388182 |
ccaaagcttgttgttttgatgggctgtctttgtttttgtcatgattttgaggaaactcattctgttatatggcaaatgaaggatttt |
6388268 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 238
Target Start/End: Complemental strand, 8443671 - 8443496
Alignment:
| Q |
63 |
aatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaagtgccacgtgttcatccaacaattgt |
162 |
Q |
| |
|
|||||||||| ||||| |||||||| ||||| |||||| |||||||| || || |||||| |||| |||| | | |||| || ||| |||||| ||| |
|
|
| T |
8443671 |
aatatgtgatagtttcgcttgatctctccaccgagtcacacactcagctgctgttgcctcagggtgttgataaggggccatgtcatcagccaacacttgc |
8443572 |
T |
|
| Q |
163 |
ggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaaggatttt |
238 |
Q |
| |
|
||||||||||||| ||||||||| | ||||||||||| ||| |||| |||||| ||| | |||||||||||| |
|
|
| T |
8443571 |
agttttgatggactgtctttgtttttcttatgatttcaagagaactcattatgttatttggcagatgaaggatttt |
8443496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 238
Target Start/End: Original strand, 10464106 - 10464297
Alignment:
| Q |
50 |
attactgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttt---tgacgaagtgccacgtg |
146 |
Q |
| |
|
|||||| | ||| |||||||||| ||||| | |||| ||||||||| | |||||||| ||||||||||||||||||| ||| || |||||| | |
|
|
| T |
10464106 |
attactatggagaaatatgtgattctttcaatcaatctttccactgagacgtacactcaactgttgctgcctcggggttttgatgatgaggtgccagatt |
10464205 |
T |
|
| Q |
147 |
ttcatccaacaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaaggatttt |
238 |
Q |
| |
|
||| |||| |||||||||||||||| | ||||||||| || |||||||| | | |||||||||||||||| |||||||||||||| |
|
|
| T |
10464206 |
atcagccaaggcttgtggttttgatggattgtctttgtttttgttatgatttccaaaatacccattttgttatatggcaaatgaaggatttt |
10464297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 238
Target Start/End: Original strand, 10467898 - 10468070
Alignment:
| Q |
65 |
tatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaagtgccacgtgttcatccaacaattgtgg |
164 |
Q |
| |
|
|||||||| ||||||||||||| || |||||| |||||||||| |||||||| ||||| |||||| | | ||| ||||| ||| |||| || || |
|
|
| T |
10467898 |
tatgtgattctttcacttgatctctcaactgagacatacactcaattgttgctacctcgaggtttt-ataaggtgtcacgtcatcagccaaagcctgcgg |
10467996 |
T |
|
| Q |
165 |
ttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaaggatttt |
238 |
Q |
| |
|
|||||||||| | |||||||| |||||||||| ||| || |||||||||||||| |||||||||||||| |
|
|
| T |
10467997 |
ttttgatggattgtctttgtttcggtcatgattatgaggaaacttattttgttatatggcaaatgaaggatttt |
10468070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 6392661 - 6392732
Alignment:
| Q |
50 |
attactgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctc |
122 |
Q |
| |
|
||||||||||||||||||||||| ||||||| | ||| ||||||||| |||||||| | ||||||||||||| |
|
|
| T |
6392661 |
attactgttgagcaatatgtgattctttcactcg-tctctccactgagacatacactaaattgttgctgcctc |
6392732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 10493520 - 10493596
Alignment:
| Q |
55 |
tgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttg |
131 |
Q |
| |
|
|||||||||||||||||| ||||| | ||||| ||||||||| |||||||||| ||||| |||||| |||||||| |
|
|
| T |
10493520 |
tgttgagcaatatgtgattctttcagtcgatctttccactgagacatacactcaactgttgttgcctcagggttttg |
10493596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 187
Target Start/End: Complemental strand, 8447881 - 8447747
Alignment:
| Q |
53 |
actgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaagtgccacgtgttcatc |
152 |
Q |
| |
|
|||||||| ||||| |||| ||||| |||| | | ||||| |||||| |||||||| ||||| |||||| ||||||||| || |||||| | ||||| |
|
|
| T |
8447881 |
actgttgatgaatatatgattgtttcgcttgctatctccaccgagtcacacactcagctgttgttgcctcagggttttgatgaggtgccatgacatcatc |
8447782 |
T |
|
| Q |
153 |
caacaattgtggttttgatggactccctttgtttt |
187 |
Q |
| |
|
| ||| ||| ||||||||||||| ||||||||| |
|
|
| T |
8447781 |
cgacacttgcagttttgatggactgtctttgtttt |
8447747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 131
Target Start/End: Complemental strand, 829792 - 829721
Alignment:
| Q |
60 |
agcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttg |
131 |
Q |
| |
|
||||||||| ||| ||||||||||||| ||||||||| |||||||| | |||| |||||||| || ||||| |
|
|
| T |
829792 |
agcaatatgcgattctttcacttgatctttccactgagacatacactaaattgtggctgcctcaggtttttg |
829721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 51 - 96
Target Start/End: Complemental strand, 1111032 - 1110987
Alignment:
| Q |
51 |
ttactgttgagcaatatgtgatcgtttcacttgatctgtccactga |
96 |
Q |
| |
|
|||| ||||||||| ||||||| |||||||||||||| |||||||| |
|
|
| T |
1111032 |
ttaccgttgagcaacatgtgattgtttcacttgatctttccactga |
1110987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 238
Target Start/End: Complemental strand, 50645690 - 50645527
Alignment:
| Q |
75 |
tttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaagtgccacgtgttcatccaacaattgtggttttgatgga |
174 |
Q |
| |
|
||||||||||||| ||||| ||| |||||||||| |||||||||||||||||||| || | | |||||| ||| |||||| || |||||| | ||| |
|
|
| T |
50645690 |
tttcacttgatctctccaccgagacatacactcaactgttgctgcctcggggttttcacaagcttccacgttatcagccaacacttaaggttttaaggga |
50645591 |
T |
|
| Q |
175 |
ctccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaaggatttt |
238 |
Q |
| |
|
| |||||| || ||||||||| |||||| ||||||||||| ||| |||||||||||||| |
|
|
| T |
50645590 |
caatctttgtatttttcatgattttgagggaactcattttgttatgtggcaaatgaaggatttt |
50645527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 143
Target Start/End: Complemental strand, 4366725 - 4366632
Alignment:
| Q |
50 |
attactgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaagtgccac |
143 |
Q |
| |
|
||||| |||||||||| ||| || ||||| ||||||||| || ||| |||||| ||| | ||||||||||| |||||||| |||||||||| |
|
|
| T |
4366725 |
attaccgttgagcaatttgttattgtttcgcttgatctgggtacagagacatacaatcaatacttgctgcctcgtggttttgaagaagtgccac |
4366632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 238
Target Start/End: Original strand, 25377023 - 25377102
Alignment:
| Q |
159 |
ttgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaaggatttt |
238 |
Q |
| |
|
|||||||||||| ||||| ||||||||| |||||||||| ||| || ||||||||||||||||| |||||||||||| |
|
|
| T |
25377023 |
ttgtggttttgacggactgtctttgtttttgtcatgatttggaggaaaaccattttgttatatggatgatgaaggatttt |
25377102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 19597828 - 19597737
Alignment:
| Q |
106 |
tcagttgttgctgcctcggggttttgacgaagtgccacgtgttcatccaacaattgtggttttgatggactccctttgttttggtcatgattt |
198 |
Q |
| |
|
||||||||||| |||||||||||||| | ||||||| ||||| ||||| |||| ||||||||||| |||||||||||| |||||||||| |
|
|
| T |
19597828 |
tcagttgttgccccctcggggttttgataatgtgccacctgttcg-ccaactcttgttgttttgatggattccctttgtttttgtcatgattt |
19597737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 234
Target Start/End: Original strand, 26256620 - 26256799
Alignment:
| Q |
55 |
tgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaagtgccacgtgttcatcca |
154 |
Q |
| |
|
||||||||||| |||||| |||| |||||||| || || ||| |||||| |||||||||||||||| |||||||| || |||||| |||||| ||| |
|
|
| T |
26256620 |
tgttgagcaatttgtgattatttcgcttgatctttcaacggagacatacaagcagttgttgctgcctcaaggttttgatgaggtgccatttgttcagcca |
26256719 |
T |
|
| Q |
155 |
acaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaagga |
234 |
Q |
| |
|
|| |||||||||||| | |||||||||| ||||||| ||||| || |||||||| ||||| | |||||||| |
|
|
| T |
26256720 |
gttcttaaggttttgatggaatgcctttgtttttctcatgataccaaggaaaatgattttgttttatggcagatgaagga |
26256799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 55 - 232
Target Start/End: Complemental strand, 19746919 - 19746742
Alignment:
| Q |
55 |
tgttgagcaatatgtgatcgtttcacttgatctgtccactgagtcatacactcagttgttgctgcctcggggttttgacgaagtgccacgtgttcatcca |
154 |
Q |
| |
|
||||||||||| |||||| ||||| |||||||| || |||||| ||||||| || || |||||||| |||||||| ||||| |||| |||| ||| |
|
|
| T |
19746919 |
tgttgagcaatttgtgattgtttcccttgatctttcgactgagacatacacacaatttttgctgccatttggttttgatgaagtcccacactttcagcca |
19746820 |
T |
|
| Q |
155 |
acaattgtggttttgatggactccctttgttttggtcatgatttcaagggaagccattttgttatatggaaaatgaag |
232 |
Q |
| |
|
|| || ||| ||||||||| |||||| ||| || ||||||||||||| | |||||||||||| |||||||| |
|
|
| T |
19746819 |
actcttcatgttctgatggactgcctttgcttttcgcacgatttcaagggaactgaatttgttatatggcaaatgaag |
19746742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University