View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4468_low_2 (Length: 288)
Name: NF4468_low_2
Description: NF4468
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4468_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 18 - 279
Target Start/End: Complemental strand, 4505902 - 4505641
Alignment:
| Q |
18 |
cttttgagttatcatgtaaaataaattatttacttcttattgcaaaattatgagtccgacctcatcattaccattgaggatacctaaagccgtgtatata |
117 |
Q |
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| T |
4505902 |
cttttgagttattatgtaaaataaattatttacttcttattgcaaaattatgagtccgacctcatcattaccattgaggatacctaaagccgtgtatata |
4505803 |
T |
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| Q |
118 |
cttccttctttaagttccaaaatttctgataaaaaataccattaggtttcatgttttttatgtcttgattgatttcttcctctggaaactccatccctaa |
217 |
Q |
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| T |
4505802 |
cttccttctttaagttccaaaatttctgataaaaaataccattaggtttcatgttttttatgtcttgattgattttttcctctggaaactccatccctaa |
4505703 |
T |
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| Q |
218 |
taaattcttcaaattatcaatgattctaccttgaacaacttgagtagactccttagtattat |
279 |
Q |
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| T |
4505702 |
taaattcttcaaattatcaatgattctcccttgaacaacttgagtagactccttagtattat |
4505641 |
T |
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