View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4469-Insertion-1 (Length: 992)

Name: NF4469-Insertion-1
Description: NF4469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4469-Insertion-1
NF4469-Insertion-1
[»] chr6 (35 HSPs)
chr6 (8-449)||(33596617-33597058)
chr6 (454-784)||(33597235-33597565)
chr6 (155-449)||(11087405-11087699)
chr6 (138-416)||(16130859-16131132)
chr6 (138-371)||(19305350-19305583)
chr6 (138-430)||(20148203-20148493)
chr6 (138-430)||(22184335-22184625)
chr6 (233-421)||(34064176-34064364)
chr6 (148-326)||(14080380-14080557)
chr6 (232-438)||(30680972-30681178)
chr6 (235-439)||(12424219-12424422)
chr6 (235-437)||(22572028-22572229)
chr6 (233-370)||(18147287-18147424)
chr6 (240-350)||(3404855-3404965)
chr6 (234-371)||(31295507-31295644)
chr6 (230-351)||(34187277-34187397)
chr6 (234-422)||(12449504-12449692)
chr6 (234-416)||(27860875-27861057)
chr6 (818-855)||(29383668-29383705)
chr6 (276-340)||(15480344-15480408)
chr6 (224-415)||(689786-689976)
chr6 (815-854)||(31517100-31517139)
chr6 (273-411)||(9403193-9403331)
chr6 (232-322)||(19331701-19331791)
chr6 (230-351)||(9277293-9277413)
chr6 (346-395)||(16343673-16343722)
chr6 (815-855)||(1897797-1897837)
chr6 (818-854)||(31480759-31480795)
chr6 (815-850)||(1196151-1196186)
chr6 (793-855)||(8395448-8395508)
chr6 (297-416)||(19277004-19277122)
chr6 (272-370)||(19730564-19730662)
chr6 (815-852)||(2582776-2582813)
chr6 (286-371)||(31423809-31423894)
chr6 (821-854)||(32853070-32853103)
[»] chr4 (31 HSPs)
chr4 (149-404)||(12683683-12683937)
chr4 (225-449)||(2674468-2674688)
chr4 (149-453)||(29156999-29157303)
chr4 (181-415)||(15742081-15742315)
chr4 (232-416)||(15514488-15514672)
chr4 (238-416)||(14601942-14602120)
chr4 (234-418)||(47253259-47253442)
chr4 (273-416)||(19643723-19643866)
chr4 (272-399)||(19809721-19809847)
chr4 (236-401)||(5518524-5518689)
chr4 (796-855)||(49194994-49195050)
chr4 (794-855)||(9162177-9162236)
chr4 (815-855)||(51717204-51717244)
chr4 (815-854)||(42915139-42915178)
chr4 (813-855)||(24337274-24337316)
chr4 (795-843)||(28203513-28203562)
chr4 (815-855)||(4896420-4896460)
chr4 (822-854)||(31240760-31240792)
chr4 (815-855)||(31275257-31275297)
chr4 (815-855)||(35580221-35580261)
chr4 (822-854)||(48372153-48372185)
chr4 (929-961)||(51389112-51389144)
chr4 (815-851)||(51389431-51389467)
chr4 (936-971)||(45257209-45257244)
chr4 (821-855)||(31658030-31658064)
chr4 (821-855)||(34974564-34974598)
chr4 (150-191)||(3981869-3981910)
chr4 (821-854)||(28480464-28480497)
chr4 (821-854)||(28481338-28481371)
chr4 (821-854)||(28482213-28482246)
chr4 (932-961)||(53091260-53091289)
[»] chr5 (33 HSPs)
chr5 (149-449)||(32418380-32418680)
chr5 (135-438)||(26994511-26994814)
chr5 (235-416)||(22865744-22865925)
chr5 (232-349)||(22903073-22903190)
chr5 (212-435)||(27083146-27083368)
chr5 (181-416)||(25537334-25537569)
chr5 (815-855)||(19376052-19376092)
chr5 (273-368)||(25333756-25333851)
chr5 (233-307)||(16621189-16621263)
chr5 (231-297)||(26348125-26348191)
chr5 (232-396)||(20025263-20025426)
chr5 (815-855)||(39595385-39595425)
chr5 (794-852)||(471928-471984)
chr5 (813-855)||(11666290-11666332)
chr5 (821-854)||(5130304-5130337)
chr5 (815-855)||(125203-125243)
chr5 (822-854)||(10232611-10232643)
chr5 (822-854)||(12661874-12661906)
chr5 (815-855)||(20719935-20719975)
chr5 (815-855)||(28811539-28811579)
chr5 (815-855)||(29402293-29402333)
chr5 (815-855)||(33567159-33567199)
chr5 (792-855)||(42909830-42909891)
chr5 (815-854)||(2117560-2117599)
chr5 (815-854)||(11306808-11306847)
chr5 (234-264)||(24546329-24546359)
chr5 (818-852)||(33910011-33910045)
chr5 (821-855)||(34381123-34381157)
chr5 (821-855)||(34767343-34767377)
chr5 (825-854)||(18449368-18449397)
chr5 (929-974)||(18695306-18695351)
chr5 (821-854)||(24431544-24431577)
chr5 (813-854)||(33243659-33243700)
[»] chr8 (37 HSPs)
chr8 (244-415)||(21416730-21416901)
chr8 (149-370)||(24507355-24507575)
chr8 (240-416)||(13754746-13754921)
chr8 (235-416)||(24576510-24576691)
chr8 (232-433)||(18322923-18323124)
chr8 (236-416)||(26916825-26917005)
chr8 (794-855)||(426212-426270)
chr8 (240-371)||(30477629-30477760)
chr8 (251-439)||(5859814-5860002)
chr8 (241-371)||(3459456-3459586)
chr8 (817-855)||(26507825-26507863)
chr8 (297-442)||(17698186-17698331)
chr8 (815-851)||(3989020-3989056)
chr8 (815-855)||(22767241-22767281)
chr8 (815-855)||(27836291-27836331)
chr8 (231-413)||(4565323-4565505)
chr8 (821-855)||(23258143-23258177)
chr8 (794-855)||(42996573-42996632)
chr8 (276-349)||(6928084-6928157)
chr8 (203-264)||(20055530-20055591)
chr8 (929-961)||(1370312-1370344)
chr8 (822-854)||(37101613-37101645)
chr8 (814-854)||(42689897-42689937)
chr8 (815-854)||(7678844-7678883)
chr8 (230-317)||(23269224-23269311)
chr8 (812-855)||(37524345-37524388)
chr8 (822-853)||(42543408-42543439)
chr8 (825-855)||(896018-896048)
chr8 (135-181)||(6928216-6928262)
chr8 (821-855)||(28927792-28927826)
chr8 (821-855)||(38128452-38128486)
chr8 (230-307)||(1909744-1909821)
chr8 (821-854)||(16011843-16011876)
chr8 (313-438)||(20055625-20055748)
chr8 (286-323)||(24070886-24070923)
chr8 (825-854)||(28473475-28473504)
chr8 (818-847)||(42047454-42047483)
[»] chr1 (32 HSPs)
chr1 (159-371)||(26977647-26977859)
chr1 (149-415)||(22414672-22414938)
chr1 (232-416)||(12177366-12177550)
chr1 (232-450)||(16050374-16050592)
chr1 (137-416)||(4601414-4601693)
chr1 (137-416)||(14254969-14255236)
chr1 (238-416)||(23728747-23728925)
chr1 (233-340)||(16030376-16030483)
chr1 (149-307)||(23280296-23280454)
chr1 (815-855)||(22389445-22389485)
chr1 (815-855)||(50659112-50659152)
chr1 (243-326)||(5671761-5671844)
chr1 (794-855)||(16836016-16836074)
chr1 (231-422)||(25408075-25408266)
chr1 (236-367)||(52565564-52565695)
chr1 (160-326)||(16299591-16299756)
chr1 (230-352)||(34273065-34273187)
chr1 (233-326)||(1659806-1659899)
chr1 (818-855)||(34187375-34187412)
chr1 (815-855)||(366768-366808)
chr1 (815-855)||(5477083-5477123)
chr1 (929-961)||(25098826-25098858)
chr1 (818-854)||(25302568-25302604)
chr1 (242-326)||(33101524-33101608)
chr1 (815-855)||(39010925-39010965)
chr1 (815-855)||(40610340-40610380)
chr1 (815-854)||(36418191-36418230)
chr1 (815-854)||(37690527-37690566)
chr1 (929-972)||(45740582-45740625)
chr1 (929-960)||(51339738-51339769)
chr1 (813-855)||(10384639-10384681)
chr1 (236-306)||(16522759-16522829)
[»] scaffold0291 (2 HSPs)
scaffold0291 (150-438)||(8486-8769)
scaffold0291 (273-416)||(15357-15500)
[»] chr7 (32 HSPs)
chr7 (149-326)||(39879284-39879461)
chr7 (234-416)||(13292050-13292232)
chr7 (181-416)||(16987019-16987254)
chr7 (233-416)||(9135288-9135471)
chr7 (232-326)||(21161222-21161315)
chr7 (230-366)||(7486523-7486659)
chr7 (225-352)||(26762902-26763029)
chr7 (815-855)||(2790288-2790328)
chr7 (139-438)||(5863074-5863373)
chr7 (233-439)||(5925380-5925585)
chr7 (314-416)||(43171963-43172065)
chr7 (232-345)||(9867937-9868050)
chr7 (233-326)||(10287613-10287706)
chr7 (794-850)||(28861998-28862052)
chr7 (818-855)||(39875732-39875769)
chr7 (929-961)||(2790178-2790210)
chr7 (312-416)||(12265052-12265156)
chr7 (233-404)||(12644766-12644938)
chr7 (929-961)||(30941179-30941211)
chr7 (234-326)||(34854225-34854317)
chr7 (815-854)||(12102629-12102668)
chr7 (297-352)||(29373491-29373546)
chr7 (815-854)||(33684792-33684831)
chr7 (821-855)||(5978690-5978724)
chr7 (929-971)||(31982049-31982090)
chr7 (813-855)||(37351908-37351950)
chr7 (793-854)||(43025919-43025978)
chr7 (936-970)||(43444627-43444661)
chr7 (821-855)||(46651783-46651817)
chr7 (821-854)||(40717165-40717198)
chr7 (932-961)||(42942420-42942449)
chr7 (821-854)||(44894400-44894433)
[»] chr2 (43 HSPs)
chr2 (183-449)||(3586294-3586560)
chr2 (230-352)||(12168950-12169073)
chr2 (235-369)||(36267481-36267615)
chr2 (232-370)||(45258125-45258263)
chr2 (234-411)||(15825136-15825313)
chr2 (234-444)||(45714977-45715187)
chr2 (152-371)||(24499695-24499908)
chr2 (234-371)||(19919038-19919175)
chr2 (232-416)||(29710998-29711180)
chr2 (300-415)||(18772296-18772411)
chr2 (232-326)||(12127680-12127774)
chr2 (233-340)||(20120328-20120435)
chr2 (232-449)||(10923060-10923276)
chr2 (794-855)||(37085120-37085181)
chr2 (138-306)||(30638449-30638617)
chr2 (815-855)||(42251840-42251880)
chr2 (818-855)||(1889258-1889295)
chr2 (813-854)||(6639390-6639431)
chr2 (236-326)||(18770296-18770388)
chr2 (815-855)||(3091852-3091892)
chr2 (815-855)||(23045272-23045312)
chr2 (815-855)||(31296763-31296803)
chr2 (815-854)||(11164296-11164335)
chr2 (815-854)||(12600160-12600199)
chr2 (815-854)||(13711173-13711212)
chr2 (812-855)||(14140256-14140299)
chr2 (818-853)||(18917737-18917772)
chr2 (815-854)||(36133086-36133125)
chr2 (138-404)||(15390524-15390790)
chr2 (133-191)||(45714897-45714955)
chr2 (822-854)||(12066021-12066053)
chr2 (232-416)||(19050362-19050546)
chr2 (815-855)||(43650467-43650507)
chr2 (929-959)||(12065920-12065950)
chr2 (149-191)||(12168891-12168933)
chr2 (821-855)||(13104590-13104624)
chr2 (821-855)||(22390263-22390297)
chr2 (334-416)||(24157233-24157315)
chr2 (240-350)||(27846512-27846622)
chr2 (821-855)||(32750109-32750143)
chr2 (825-855)||(36376781-36376811)
chr2 (929-966)||(36435677-36435714)
chr2 (795-854)||(40326239-40326295)
[»] scaffold0140 (1 HSPs)
scaffold0140 (157-396)||(6203-6442)
[»] scaffold0023 (1 HSPs)
scaffold0023 (232-439)||(95714-95921)
[»] scaffold0054 (2 HSPs)
scaffold0054 (272-439)||(68706-68871)
scaffold0054 (794-854)||(31502-31559)
[»] chr3 (32 HSPs)
chr3 (232-416)||(431243-431427)
chr3 (149-375)||(9801052-9801277)
chr3 (239-453)||(20622393-20622608)
chr3 (233-326)||(21342304-21342397)
chr3 (297-432)||(16704447-16704582)
chr3 (272-399)||(28723718-28723845)
chr3 (157-416)||(1770730-1770990)
chr3 (272-433)||(30606948-30607109)
chr3 (334-449)||(25496020-25496134)
chr3 (334-416)||(12108501-12108583)
chr3 (234-416)||(12516167-12516349)
chr3 (813-855)||(39604164-39604206)
chr3 (815-855)||(11173561-11173601)
chr3 (815-855)||(35272138-35272178)
chr3 (815-854)||(5188348-5188387)
chr3 (273-340)||(17143752-17143819)
chr3 (818-853)||(24551150-24551185)
chr3 (815-854)||(29706015-29706054)
chr3 (234-371)||(14860071-14860208)
chr3 (311-418)||(13933003-13933113)
chr3 (815-855)||(20380809-20380849)
chr3 (929-961)||(34271528-34271560)
chr3 (815-855)||(37215151-37215191)
chr3 (823-855)||(46473239-46473271)
chr3 (823-854)||(32457683-32457714)
chr3 (815-854)||(37302994-37303033)
chr3 (272-326)||(13085090-13085144)
chr3 (821-855)||(19418086-19418120)
chr3 (929-971)||(20380927-20380969)
chr3 (825-854)||(6126566-6126595)
chr3 (149-198)||(17143894-17143943)
chr3 (815-855)||(41877530-41877571)
[»] scaffold0002 (2 HSPs)
scaffold0002 (160-371)||(379624-379835)
scaffold0002 (286-371)||(120983-121068)
[»] scaffold0005 (1 HSPs)
scaffold0005 (238-416)||(215258-215436)
[»] scaffold0205 (2 HSPs)
scaffold0205 (216-392)||(10866-11042)
scaffold0205 (235-370)||(22869-23004)
[»] scaffold0360 (1 HSPs)
scaffold0360 (275-370)||(13945-14040)
[»] scaffold0013 (1 HSPs)
scaffold0013 (234-373)||(4394-4533)
[»] scaffold0505 (1 HSPs)
scaffold0505 (233-326)||(7866-7959)
[»] scaffold0294 (1 HSPs)
scaffold0294 (273-416)||(169-313)
[»] scaffold0174 (1 HSPs)
scaffold0174 (149-326)||(29295-29470)
[»] scaffold0076 (1 HSPs)
scaffold0076 (794-855)||(11303-11362)
[»] scaffold0103 (1 HSPs)
scaffold0103 (238-415)||(40782-40959)
[»] scaffold0011 (1 HSPs)
scaffold0011 (818-855)||(219587-219624)
[»] scaffold0543 (1 HSPs)
scaffold0543 (342-422)||(4869-4949)
[»] scaffold0492 (1 HSPs)
scaffold0492 (342-422)||(6415-6495)
[»] scaffold0380 (1 HSPs)
scaffold0380 (273-416)||(6787-6930)
[»] scaffold0464 (1 HSPs)
scaffold0464 (190-326)||(11454-11587)
[»] scaffold0074 (1 HSPs)
scaffold0074 (157-438)||(35158-35440)


Alignment Details
Target: chr6 (Bit Score: 334; Significance: 0; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 334; E-Value: 0
Query Start/End: Original strand, 8 - 449
Target Start/End: Original strand, 33596617 - 33597058
Alignment:
Q  8 gaaagtgatgatgtccttccatgagattagtggtaagaatatcatatgaagtacatattgaacttcaagtttactcctatatgcaatgactgagtttgcc 107  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  33596617 gaaagtgatgatgtccttccatgagattagtagtaagaatatcatatgaagtacatattgaacttcaagttttctctgatatgcaatgactgagtttgcc 33596716  T
Q  108 taaaatgttagggggtgcaagtatagattttgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggctt 207  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33596717 taaaatgttagggggtgcaagtatagattttgatttgtccagtgaggatggatgagtggcaaccgtggcggaaaatgctccagtgtgacggtgaaggctt 33596816  T
Q  208 ctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgt 307  Q
    ||||||| |||||||||||||||||||||||||||||||||  |||||||||| ||||| || |||||||||||||| |||||||||||||||| |||||    
T  33596817 ctgatacggcggcgaagaatccttgcggtggaacgaaaggtacctgcaggcacattaacactctaacgctcaactcagtaatgaaactaagaaaaagtgt 33596916  T
Q  308 atagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggca 407  Q
     ||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||| ||| |||||||||| |||| ||||||||||||||     
T  33596917 gtagaaagtgttgtgaaaatggaatcataccttgaggatgaagcaagttcactcttatataggcgcgctttgagcataattgtcaccggattatgcggcg 33597016  T
Q  408 tgtgattagaggcggttataggacacgtgtaggatgaccctc 449  Q
    | ||||||| |||||||| ||||||| |||||||||||||||    
T  33597017 tatgattaggggcggttagaggacacatgtaggatgaccctc 33597058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 454 - 784
Target Start/End: Original strand, 33597235 - 33597565
Alignment:
Q  454 taaaaattcaaaggtaaatcattacaagacgaaaacaaaatatata--aaacgagatgtgaacctaaaatttgaatattgtcatttttt-aaggtaatta 550  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||  ||| ||||||||||||||||||||||||| ||||||||||| || |||||||    
T  33597235 taaaaattcaatggtaaatcaatacaagacgaaaaaaaaatatatataaaaggagatgtgaacctaaaatttgaataatgtcatttttttaacgtaatta 33597334  T
Q  551 gtatattaagaaaa-agtaaactatcaaatttgttattgatttcataggacgctttcaaaaggtcatttaagattgtgaatattctaaaaggaacttgta 649  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| |||||||||||||||    
T  33597335 gtatattaaaaaaaaagtaaactatcaaatttgttattgatttcataggacgcttacaaaaggtcttttaagattgtaaatattttaaaaggaacttgta 33597434  T
Q  650 agacattactcatatcagcttgaatcaaacatttacatttgaattgataagttggtcattatgtttcaaaacttaatatcaaataggtatttatatttaa 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33597435 agacattactcatatcagcttgaatcaaacatttacatttgaattgataagttggtcattatgtttcaaaacttaatatcaaataggtatttatatttaa 33597534  T
Q  750 ttatttactatcaacttattctttaacatatactc 784  Q
    |||||| ||||    ||| ||||||||||||||||    
T  33597535 ttatttgctat----ttaatctttaacatatactc 33597565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 155 - 449
Target Start/End: Original strand, 11087405 - 11087699
Alignment:
Q  155 atggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgc 254  Q
    |||||||||||||||| |||  ||| ||||||| ||||||| ||| |||||||||  | | || |||  || || | ||||||||||||||| |||||||    
T  11087405 atggatgagtggcaacggtgaaggataatgctctggtgtgatggtaaaggcttcttgtgcggcagcgctgagtcttcgcggtggaacgaaagctgtctgc 11087504  T
Q  255 aggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcagg 354  Q
    || ||| ||| | |||| || || || ||| ||||| |||| ||||||||| | ||||  ||||||||||||  ||||| |||||| |||||||| || |    
T  11087505 agacacattagcactttgacccttaagtcagtaatgtaactgagaaagagtatgtagattgtgttgtgaaaagtgaatcataccttgaggatgaaacaag 11087604  T
Q  355 ttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacgtgtaggatgaccctc 449  Q
    ||||| ||||||||||  ||| |||||||||||||||||||||||||||||| ||| ||||  | |||||| |||||||||||||| ||| ||||    
T  11087605 ttcacccttatataggtgcgcgttgagcataactgtctccggattatgcggcgtgtaattaaggacggttagaggacacgtgtagggtgatcctc 11087699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 138 - 416
Target Start/End: Original strand, 16130859 - 16131132
Alignment:
Q  138 tgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtg 237  Q
    |||||||||  ||||||||| ||||||| |||   || ||||||||| |||||||||| | | || |||||||||| |||||||  ||||||||||||||    
T  16130859 tgatttgtccggtgaggatgaatgagtgtcaatgatgacggaaaatgttccggtgtgatgttcaaagcttctgatatagcggcgctgaatccttgcggtg 16130958  T
Q  238 gaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtac 337  Q
    | |||| |||||  || ||||||||     || | ||| |||| ||| ||||| |||| | |||||||||| ||||||||||||||||   ||||| |||    
T  16130959 ggacgacaggtgcttgtaggcacgt-----ctctgacggtcaagtcagtaatggaactgataaagagtgtacagaaagtgttgtgaaacgtgaatcatac 16131053  T
Q  338 cttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||| ||| |||| || ||| || ||||||||||| ||| || ||||||||||||||||||||||| |||||||||||||    
T  16131054 cttgagggtgaaacaagtttacccttatataggcgcgcattaagcataactgtctccggattatgtggcatgtgattag 16131132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 138 - 371
Target Start/End: Original strand, 19305350 - 19305583
Alignment:
Q  138 tgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaat-gctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggt 236  Q
    |||| |||||||||||||||||||||| ||||  |||||| ||||| |||||||||||||| ||| || ||||| ||||| ||  | ||||| |||||||    
T  19305350 tgatatgtctagtgaggatggatgagtagcaatggtggcgtaaaattgctccggtgtgacg-tgatggtttctggtacagtggtaatgaatctttgcggt 19305448  T
Q  237 ggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgta 336  Q
    ||||||||||||  ||  |||||||||| | ||| ||||||||| ||| ||||| |||| || |||||||| ||||||||||||||||||  ||||| ||    
T  19305449 ggaacgaaaggttcctagaggcacgttagcacttaaacgctcaagtcagtaatggaactgagtaagagtgtgtagaaagtgttgtgaaaagtgaatcata 19305548  T
Q  337 ccttaaggatgaagcaggttcactcttatataggc 371  Q
    |||| ||| ||||||| | |||| |||| ||||||    
T  19305549 ccttgagggtgaagcaaggtcacccttaaataggc 19305583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 138 - 430
Target Start/End: Original strand, 20148203 - 20148493
Alignment:
Q  138 tgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtg 237  Q
    |||| |||| ||||||||||||||||||||||   ||||||||| ||||||||||||||| |||  | ||||| ||  | |  || || || ||||||||    
T  20148203 tgatatgtccagtgaggatggatgagtggcaatgatggcggaaagtgctccggtgtgacgatgacagtttctggtatggggctgacgagtctttgcggtg 20148302  T
Q  238 gaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtac 337  Q
    |||||||| |||  ||||| ||||||| | ||  | ||||||| | | ||||| || | ||||||||||||  ||||||||||||||||  ||||| |||    
T  20148303 gaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaagagtgta--gaaagtgttgtgaaaagtgaatcatac 20148400  T
Q  338 cttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttatagga 430  Q
    ||| | | ||||||| | |||| ||||||||||||||| ||||| ||||||| |||||| ||  ||||||||| ||||| |  ||||||||||    
T  20148401 cttgatggtgaagcaaggtcacccttatataggcacgcgttgagaataactgcctccgggtttcgcggcatgtcattagggttggttatagga 20148493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 138 - 430
Target Start/End: Complemental strand, 22184625 - 22184335
Alignment:
Q  138 tgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtg 237  Q
    |||| |||| ||||||||||||||||||||||   ||||||||| ||||||||||||||| |||  | ||||| ||  | |  || || || ||||||||    
T  22184625 tgatatgtccagtgaggatggatgagtggcaatgatggcggaaagtgctccggtgtgacgatgacagtttctggtatggggctgacgagtctttgcggtg 22184526  T
Q  238 gaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtac 337  Q
    |||||||| |||  ||||| ||||||| | ||  | ||||||| | | ||||| || | ||||||||||||  ||||||||||||||||  ||||| |||    
T  22184525 gaacgaaaagtgcatgcagacacgttagcactccatcgctcaagttagtaatggaattgagaaagagtgta--gaaagtgttgtgaaaagtgaatcatac 22184428  T
Q  338 cttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttatagga 430  Q
    ||| | | ||||||| | |||| ||||||||||||||| ||||| ||||||| |||||| ||  ||||||||| ||||| |  ||||||||||    
T  22184427 cttgatggtgaagcaaggtcacccttatataggcacgcgttgagaataactgcctccgggtttcgcggcatgtcattagggttggttatagga 22184335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 233 - 421
Target Start/End: Original strand, 34064176 - 34064364
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaat 332  Q
    |||| ||||||||||||| ||||||||||||||| || | ||| |||| ||| |||||||||||||||||||||| ||  ||||||||||||||  ||      
T  34064176 cggtagaacgaaaggtgtgtgcaggcacgttaacactatgacgttcaagtcagtaatgaaactaagaaagagtgtgtaagaagtgttgtgaaaagtgatg 34064275  T
Q  333 cgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcg 421  Q
     ||||||| ||| ||||||| |||||| ||||||||||| ||  |||  |||||| ||| |||| |||||||||| |||||||| ||||    
T  34064276 tgtaccttgagggtgaagcaagttcacccttatataggcgcgagttggccataaccgtcaccgggttatgcggcacgtgattaggggcg 34064364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 148 - 326
Target Start/End: Original strand, 14080380 - 14080557
Alignment:
Q  148 agtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaagg 247  Q
    |||||||||||||||||| |||  |||||||||| |||| || ||||| ||||| || ||| | ||| |||| || |||| |||| ||||| ||||||||    
T  14080380 agtgaggatggatgagtgacaatggtggcggaaagtgcttcgatgtgatggtgacggtttccggtacggcggtgacgaattcttgtggtgggacgaaagg 14080479  T
Q  248 tgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    || || ||||||| ||| | || | |||||||| | | ||||| |||| ||||||||||| ||| ||||||||||||||    
T  14080480 tgcctacaggcacattagcactctgacgctcaagttagtaatg-aactgagaaagagtgtgtagtaagtgttgtgaaaa 14080557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 232 - 438
Target Start/End: Original strand, 30680972 - 30681178
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||| ||||||||||||||||  ||||||| | ||  ||||||||| ||| |||||||||| | |||||| || ||||| || |||||||||  |||    
T  30680972 gcggtgggacgaaaggtgtctgcaatcacgttagcactccaacgctcaagtcagtaatgaaactgataaagagcgtgtagaatgtattgtgaaaagtgaa 30681071  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggac 431  Q
    || |||||| |||||||||||   ||||  ||| |||||| ||| ||||| ||||| | |||||  || |||||| ||||||||||   ||||| | |||    
T  30681072 tcataccttgaggatgaagcaatgtcacctttagataggcgcgcgttgagaataaccgcctccgagttttgcggcgtgtgattagaaaaggttaaaagac 30681171  T
Q  432 acgtgta 438  Q
    |||||||    
T  30681172 acgtgta 30681178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 235 - 439
Target Start/End: Complemental strand, 12424422 - 12424219
Alignment:
Q  235 gtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcg 334  Q
    ||||||||||||||| |||||||||||||| | ||   ||  |||| ||| ||||| |||| ||| |||  || || |||||||||||||||  |    |    
T  12424422 gtggaacgaaaggtgcctgcaggcacgttagcactacgacaatcaagtcagtaatggaactgagagagaaagtctaaaaagtgttgtgaaaagtgttgtg 12424323  T
Q  335 taccttaaggatgaagcaggttcactcttatataggcacgc-cttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacac 433  Q
    |||||||||| ||||||| |||||| ||||||||||| ||| | ||| |||||| |||||||| |||||||||||||||||||| ||||  | |||||||    
T  12424322 taccttaagggtgaagcaagttcacccttatataggcgcgctcgtga-cataaccgtctccgggttatgcggcatgtgattagaagcgg-gaaaggacac 12424225  T
Q  434 gtgtag 439  Q
    ||||||    
T  12424224 gtgtag 12424219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 235 - 437
Target Start/End: Original strand, 22572028 - 22572229
Alignment:
Q  235 gtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcg 334  Q
    ||||||| ||||||| |||||||||||||| | || | |||||||  ||| ||||| || | | ||||||||| ||||| |||||||| |||  |||||     
T  22572028 gtggaacaaaaggtggctgcaggcacgttagcactatgacgctcatgtcagtaatggaattga-aaagagtgtgtagaaggtgttgtgtaaagtgaatca 22572126  T
Q  335 taccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacg 434  Q
    || ||| ||| ||||||| ||||||  |||||| ||| ||| ||||||||||| |||||| | |||||||   | ||||||| | |||||| ||||||||    
T  22572127 tatcttgagggtgaagcaagttcacctttatattggcgcgcgttgagcataaccgtctccaggttatgcgaagtatgattagggacggttagaggacacg 22572226  T
Q  435 tgt 437  Q
    |||    
T  22572227 tgt 22572229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 233 - 370
Target Start/End: Original strand, 18147287 - 18147424
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaat 332  Q
    ||||| ||||||||||| ||| ||| |||||||| ||  ||||||||| ||| ||||| |||  ||||||||||| ||||||||||||||||||  || |    
T  18147287 cggtgaaacgaaaggtgcctgtaggaacgttaacactccaacgctcaagtcactaatggaaccgagaaagagtgtgtagaaagtgttgtgaaaagtgact 18147386  T
Q  333 cgtaccttaaggatgaagcaggttcactcttatatagg 370  Q
    | |||||| ||| |||||||   |||| ||||||||||    
T  18147387 catacctttagggtgaagcaatgtcacccttatatagg 18147424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 3404965 - 3404855
Alignment:
Q  240 acgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtacct 339  Q
    |||||| ||||||| |||||| ||||| || |||| || || ||| ||||| |||| ||||||||||| ||||||||||||||||||  ||||| |||||    
T  3404965 acgaaatgtgtctgtaggcacattaacactctaacacttaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaaatgaatcatacct 3404866  T
Q  340 taaggatgaag 350  Q
    | ||| |||||    
T  3404865 tgagggtgaag 3404855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 234 - 371
Target Start/End: Complemental strand, 31295644 - 31295507
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    ||||||||||||| || ||||||||| |||| | |||  |||||||| ||| |||||||||| ||||||||||| ||  ||||||||||||||  ||       
T  31295644 ggtggaacgaaagttgcctgcaggcatgttagcacttcgacgctcaagtcagtaatgaaactgagaaagagtgtgtatgaagtgttgtgaaaagtgatat 31295545  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggc 371  Q
    ||||||  ||| ||||||| |||||| |||| ||||||    
T  31295544 gtacctcgagggtgaagcaagttcacccttacataggc 31295507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 230 - 351
Target Start/End: Original strand, 34187277 - 34187397
Alignment:
Q  230 ttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatgg 329  Q
    ||||||||||||||||||||||||||| ||||||| | |   ||| ||||| ||| ||||| |||| ||||||||||| || ||||||| |||||| | |    
T  34187277 ttgcggtggaacgaaaggtgtctgcagacacgttagcacaccaacactcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgtggtgaaagt-g 34187375  T
Q  330 aatcgtaccttaaggatgaagc 351  Q
    ||| ||||||| ||| ||||||    
T  34187376 aattgtaccttgagggtgaagc 34187397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 422
Target Start/End: Complemental strand, 12449692 - 12449504
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    ||||| |||||||||||||| |||||||||| | || | |||||||| ||| ||||| | || | ||||||||| ||  |||||||||| |||  ||       
T  12449692 ggtgggacgaaaggtgtctgtaggcacgttagcactctgacgctcaagtcagtaatggagctgaaaaagagtgtgtaagaagtgttgtggaaagtgatgt 12449593  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcgg 422  Q
    ||||||| ||| |||| || ||| || ||||||||||| ||| |||  ||||||||||||| | |||||| |  ||||||||| |||||    
T  12449592 gtaccttgagggtgaatcaagtttacccttatataggcgcgcgttggtcataactgtctccaggttatgcagtgtgtgattaggggcgg 12449504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 27861057 - 27860875
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    |||||||| ||||||||||||||||| ||||   || |||| ||||| ||| ||||| |||| | | |||| || ||  ||||||||||||||  ||       
T  27861057 ggtggaacaaaaggtgtctgcaggcatgttagtactctaacactcaagtcagtaatggaactgaaagagagagtgtaagaagtgttgtgaaaagtgatgt 27860958  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    |||| || ||| ||||||| |||||| ||| ||||||| ||  |||  |||||| |||||||| ||||||||| |||||||||    
T  27860957 gtactttgagggtgaagcaagttcacccttttataggcgcgtgttggccataaccgtctccgggttatgcggcgtgtgattag 27860875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 818 - 855
Target Start/End: Complemental strand, 29383705 - 29383668
Alignment:
Q  818 ttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29383705 ttatgtgacaacttcttttttctctcttttcattggtc 29383668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 276 - 340
Target Start/End: Complemental strand, 15480408 - 15480344
Alignment:
Q  276 ctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtacctt 340  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||||||||||||  ||||| ||||||    
T  15480408 ctcaagtcaataatgaaactgagaaaaagtgtgtagaaagtgttgtgaaaagtgaatcatacctt 15480344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 224 - 415
Target Start/End: Complemental strand, 689976 - 689786
Alignment:
Q  224 gaatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtga 323  Q
    ||||| ||||| | ||| ||||||||| |||||| || ||| | ||  || |||||| ||| ||||| |||| |||||| |||| || ||||||||||||    
T  689976 gaatcattgcgatagaatgaaaggtgtttgcaggtacattagcactgcaatgctcaagtcagtaatggaactgagaaagtgtgtgtataaagtgttgtga 689877  T
Q  324 aaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgatta 415  Q
    |||  |||||||||||| ||| || | || | |||| ||||||||||| | | |||| |||||  |||||||  || |||||| ||||||||    
T  689876 aaagtgaatcgtaccttgaggctg-atcaaggtcacccttatataggcgcacgttgatcataatcgtctccgagttttgcggcgtgtgatta 689786  T

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Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 854
Target Start/End: Original strand, 31517100 - 31517139
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  31517100 aacttatgtgacaacttcttttttctctctttttattggt 31517139  T

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Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 273 - 411
Target Start/End: Original strand, 9403193 - 9403331
Alignment:
Q  273 acgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggca 372  Q
    |||||||| ||||||||| |||| ||||||||||| ||  |||||||||| |||  ||   ||||||| ||| ||||||| |||||| ||||||||||      
T  9403193 acgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgttgtggaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggtg 9403292  T
Q  373 cgccttgagcataactgtctccggattatgcggcatgtg 411  Q
    ||| |||  |||||||| |||  | ||||||| ||||||    
T  9403293 cgcgttggccataactgcctctaggttatgcgacatgtg 9403331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 232 - 322
Target Start/End: Complemental strand, 19331791 - 19331701
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtg 322  Q
    ||||||||||||||||||  |||||| ||||||   ||   ||||| || ||| ||||| ||||||||||||| |||||||||||||||||    
T  19331791 gcggtggaacgaaaggtgcttgcaggtacgttagtactccgacgcttaagtcagtaatggaactaagaaagagagtatagaaagtgttgtg 19331701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 230 - 351
Target Start/End: Complemental strand, 9277413 - 9277293
Alignment:
Q  230 ttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatgg 329  Q
    |||||||||||||||||||  |||||| ||||||| | || |||||||||| ||| || || |||| ||||||||| | || ||||||| | |||| | |    
T  9277413 ttgcggtggaacgaaaggttcctgcagacacgttagcactataacgctcaagtcagtattggaactgagaaagagtatgtaaaaagtgtggagaaagt-g 9277315  T
Q  330 aatcgtaccttaaggatgaagc 351  Q
    |||| |||||| ||| ||||||    
T  9277314 aatcataccttgagggtgaagc 9277293  T

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Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 346 - 395
Target Start/End: Original strand, 16343673 - 16343722
Alignment:
Q  346 tgaagcaggttcactcttatataggcacgccttgagcataactgtctccg 395  Q
    ||||||| |||||| ||||||||||||||| ||||||||||| |||||||    
T  16343673 tgaagcaagttcacacttatataggcacgcgttgagcataaccgtctccg 16343722  T

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Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 1897837 - 1897797
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  1897837 aacttttgtgacaacctcttttttctctcttttcattggtc 1897797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 818 - 854
Target Start/End: Original strand, 31480759 - 31480795
Alignment:
Q  818 ttatgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||||||||||||||| ||||||    
T  31480759 ttatgtgacaacttcttttttctctctttttattggt 31480795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 850
Target Start/End: Complemental strand, 1196186 - 1196151
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcat 850  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1196186 aacttatgtgataacttcttttttctctcttttcat 1196151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 793 - 855
Target Start/End: Complemental strand, 8395508 - 8395448
Alignment:
Q  793 tgagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||| |||||||||||| |  |||| ||||| || |||||||||||||||||||||||    
T  8395508 tgagtagtgttatttgaacaatca--tatgagacaatttattttttctctcttttcattggtc 8395448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 416
Target Start/End: Complemental strand, 19277122 - 19277004
Alignment:
Q  297 agaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccgg 396  Q
    ||||||||||| ||  ||||||||||||||  ||   ||||||| ||| ||||||| |||||| ||||||||||| ||| |||  |||||| ||||| ||    
T  19277122 agaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcacccttatataggcgcgctttggtcataaccgtctctgg 19277023  T
Q  397 attatgcggcatgtgattag 416  Q
     ||||||||| | |||||||    
T  19277022 -ttatgcggcgtatgattag 19277004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 272 - 370
Target Start/End: Complemental strand, 19730662 - 19730564
Alignment:
Q  272 aacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatatagg 370  Q
    ||||||||| ||||||||| |||| ||||||||||| ||  |||||| ||| |||  ||   ||||||| ||| ||||||| |||||| ||||||||||    
T  19730662 aacgctcaagtcaataatggaactgagaaagagtgtgtaagaagtgtcgtgtaaagtgatgtgtaccttgagggtgaagcaagttcacccttatatagg 19730564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 815 - 852
Target Start/End: Complemental strand, 2582813 - 2582776
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattg 852  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  2582813 aacttttgtgacaacctcttttttctctcttttcattg 2582776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 371
Target Start/End: Complemental strand, 31423894 - 31423809
Alignment:
Q  286 taatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggc 371  Q
    |||||||||| ||||||||| | ||||||||||||||| ||  ||||| |  ||| ||| ||||||| || ||| |||||||||||    
T  31423894 taatgaaactgagaaagagtatgtagaaagtgttgtgagaagtgaatcatgtcttgagggtgaagcaagtgcacccttatataggc 31423809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 821 - 854
Target Start/End: Original strand, 32853070 - 32853103
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||||||| |||||||||||    
T  32853070 tgtgacaacttcttttttctcttttttcattggt 32853103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 6e-49; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 149 - 404
Target Start/End: Original strand, 12683683 - 12683937
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggt 248  Q
    |||||||||||||||||||||  |||||||| |||| ||| |||||||||||| || ||| | |||  || ||| || || |||||||||||||||||||    
T  12683683 gtgaggatggatgagtggcaaaggtggcggataatgttccagtgtgacggtgacggtttccg-tacgacgacgatgagtctttgcggtggaacgaaaggt 12683781  T
Q  249 gtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatga 348  Q
    | |||||||||||||| | ||  ||||||||| | | |||||||||| ||||||||||| ||||||||||||||||||  ||||| |||||||||| |||    
T  12683782 gcctgcaggcacgttagcactccaacgctcaagttagtaatgaaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttaagggtga 12683881  T
Q  349 agcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcg 404  Q
    |||| |||||| ||||| ||||| ||| || |||||||| |||||||  |||||||    
T  12683882 agcaagttcacccttatctaggcgcgcattaagcataaccgtctccgagttatgcg 12683937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 225 - 449
Target Start/End: Complemental strand, 2674688 - 2674468
Alignment:
Q  225 aatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaa 324  Q
    ||||||||||||||  |||||||||| ||||| || |||| | ||  ||||| ||| ||||||||| ||||     ||||||| ||||||||||||||||    
T  2674688 aatccttgcggtggggcgaaaggtgtatgcagtcatgttagcactccaacgcacaagtcaataatgtaact----gagagtgtgtagaaagtgttgtgaa 2674593  T
Q  325 aatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggtt 424  Q
    ||  ||||| |||||| ||||||||| | |||||| |||||||| || ||| ||||||||||| ||||||||||| |||||| ||||||||| | | |||    
T  2674592 aagtgaatcataccttgaggatgaagtaagttcacccttatataagcgcgcgttgagcataaccgtctccggattttgcggcgtgtgattagggacagtt 2674493  T
Q  425 ataggacacgtgtaggatgaccctc 449  Q
    | |||||||||||||| ||| ||||    
T  2674492 agaggacacgtgtagggtgatcctc 2674468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 149 - 453
Target Start/End: Original strand, 29156999 - 29157303
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggt 248  Q
    ||||||||||||||||| ||||  ||  ||||| |||||||||||||| | || || ||| | ||  ||| ||| |||||||||||||||||||||||||    
T  29156999 gtgaggatggatgagtgacaacgatgatggaaagtgctccggtgtgacagcgatggtttccggtaaggcgacgatgaatccttgcggtggaacgaaaggt 29157098  T
Q  249 gtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatga 348  Q
    |  ||||| ||||||  | ||  ||||||||| | | ||||| |||| ||||| ||||| ||| |||||||||| |||  ||| | |||||| | | |||    
T  29157099 gcatgcagacacgtttgcactccaacgctcaagttagtaatggaactgagaaaaagtgtgtagtaagtgttgtgtaaagtgaaccataccttgatggtga 29157198  T
Q  349 agcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacgtgtaggatgaccct 448  Q
    || | |||||| ||||||||||| ||| | ||| ||||| ||||| || |||||||||   ||||||| | |||||| ||||||| |||||||||| |||    
T  29157199 agtaagttcacccttatataggcgcgcgtagaggataaccgtctctgggttatgcggctaatgattagggacggttagaggacacatgtaggatgatcct 29157298  T
Q  449 cacgc 453  Q
    |||||    
T  29157299 cacgc 29157303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 181 - 415
Target Start/End: Complemental strand, 15742315 - 15742081
Alignment:
Q  181 aatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaa 280  Q
    ||||||||||||||||||| | || |||||| || ||| ||| || || | | |||||| ||||||||| |||| ||||||||| | || | ||||||||    
T  15742315 aatgctccggtgtgacggtaacggtttctgacacggcgacgatgagtcttcgtggtggagcgaaaggtgcctgctggcacgttagcactcttacgctcaa 15742216  T
Q  281 ctcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttga 380  Q
     ||| ||||| |||| ||||| ||||| ||  ||||||||||||||  ||   ||||||| ||  |||||||  ||||| ||||||||||| ||  |||     
T  15742215 gtcagtaatggaactgagaaaaagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagactgaagcaaattcacccttatataggcgcgtgttgg 15742116  T
Q  381 gcataactgtctccggattatgcggcatgtgatta 415  Q
     |||||| |||||||| ||||||||| ||||||||    
T  15742115 ccataaccgtctccgggttatgcggcgtgtgatta 15742081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 232 - 416
Target Start/End: Complemental strand, 15514672 - 15514488
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||||||||| |||| ||| |||||||||| | ||  ||||||||| ||| ||||| |||| | ||||||||| ||  |||||||||| |||  ||     
T  15514672 gcggtggaacgaagggtgcctgtaggcacgttagcactccaacgctcaagtcagtaatggaactgaaaaagagtgtgtaagaagtgttgtggaaagtgat 15514573  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
      ||||||| ||| ||||||| |||||| ||||||||||| |||| ||  ||||||  ||||| | ||||||||||| |||||||    
T  15514572 gtgtaccttgagggtgaagcaagttcacccttatataggctcgccctggtcataaccatctccaggttatgcggcatatgattag 15514488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 238 - 416
Target Start/End: Complemental strand, 14602120 - 14601942
Alignment:
Q  238 gaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtac 337  Q
    ||||||||| ||||||||||||||||| |  |  ||||||||| ||| |||||||||| | | ||||||| ||  ||||||||||||||  |    ||||    
T  14602120 gaacgaaagttgtctgcaggcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgttgtgtac 14602021  T
Q  338 cttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||| ||| ||||||| |||||  ||||||||| |  |  |||| ||||||||||||||| ||||||||| |||||||||    
T  14602020 cttgagggtgaagcaagttcatccttatatagccgtgtgttgatcataactgtctccgggttatgcggcgtgtgattag 14601942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 234 - 418
Target Start/End: Original strand, 47253259 - 47253442
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    ||||| || |||||||  |||||||| |||| | ||  ||||||||| ||| ||||| |||| ||||||||||| || |||||||||||||||  |||||    
T  47253259 ggtgggacaaaaggtgcttgcaggcatgttagcactccaacgctcaagtcagtaatggaactgagaaagagtgtgtaaaaagtgttgtgaaaagtgaatc 47253358  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagag 418  Q
     |||||| ||| ||||||    |||| ||||||||||| || | |||  |||||||||||||| || |||||  |||||||||||    
T  47253359 ataccttgagggtgaagctaagtcacccttatataggcgcg-catgataataactgtctccgggttttgcggtgtgtgattagag 47253442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 273 - 416
Target Start/End: Original strand, 19643723 - 19643866
Alignment:
Q  273 acgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggca 372  Q
    ||||| || ||| ||||| |||| ||||||||||| |||||||| |||||||||  ||||| |||||| ||| |||| || |||||| |||||||||||     
T  19643723 acgcttaagtcagtaatggaactgagaaagagtgtgtagaaagtcttgtgaaaagtgaatcataccttgagggtgaaacaagttcacccttatataggcg 19643822  T
Q  373 cgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
     || ||||| ||||| ||||| |  ||||||||| || ||||||    
T  19643823 tgcgttgaggataaccgtctctgagttatgcggcgtgagattag 19643866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 399
Target Start/End: Original strand, 19809721 - 19809847
Alignment:
Q  272 aacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggc 371  Q
    ||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||  ||||  |||||| ||| |||| |    |||| |||| ||||||    
T  19809721 aacgctcaagtcagtaatgaaactaagaaagagtgtgtagaaagtgttgtgaaaagtgaattataccttgagggtgaaactaagtcacccttacataggc 19809820  T
Q  372 acgccttgagcataactgtctccggatt 399  Q
     || | |||| |||||||||||||||||    
T  19809821 gcg-cgtgagaataactgtctccggatt 19809847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 236 - 401
Target Start/End: Original strand, 5518524 - 5518689
Alignment:
Q  236 tggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgt 335  Q
    ||||||||||||||  ||||| ||||||| | ||| ||||||||| ||| ||||  |||| ||| ||| ||| ||  |||||||||| |||  ||  |||    
T  5518524 tggaacgaaaggtgagtgcagacacgttagcacttcaacgctcaagtcagtaattgaactgagagagaatgtgtaagaagtgttgtggaaagtgatgcgt 5518623  T
Q  336 accttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattat 401  Q
    ||||| ||| ||||||| |||||| ||||||||||| ||  ||| ||||||| |||||||| ||||    
T  5518624 accttgagggtgaagcaagttcacccttatataggcgcgtgttgggcataaccgtctccgggttat 5518689  T

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Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 796 - 855
Target Start/End: Complemental strand, 49195050 - 49194994
Alignment:
Q  796 gtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||   |||||||||||||||||||| |||||||||| |||||||    
T  49195050 gtagtgatatttgaacaa---cttatgtgacaacttcttttctctctctttttattggtc 49194994  T

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Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 794 - 855
Target Start/End: Complemental strand, 9162236 - 9162177
Alignment:
Q  794 gagtagtgatatttga-acaataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||| |||||   || |||||||||||||||||||||||||||||||||||    
T  9162236 gagtagtgatatttgatacaat---ttttgtgacaacttcttttttctctcttttcattggtc 9162177  T

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Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 51717204 - 51717244
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  51717204 aacttatgtgacaatttcttttttctctcttttcattggtc 51717244  T

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Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 854
Target Start/End: Original strand, 42915139 - 42915178
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  42915139 aacttttgtgacaacttcttttttctctcttttcattggt 42915178  T

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Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 813 - 855
Target Start/End: Original strand, 24337274 - 24337316
Alignment:
Q  813 ataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||| |||||||||| |||||||||||||||||||||||||||    
T  24337274 ataatttatgtgacagcttcttttttctctcttttcattggtc 24337316  T

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Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 795 - 843
Target Start/End: Complemental strand, 28203562 - 28203513
Alignment:
Q  795 agtagtgatatttgaacaat-aacttatgtgacaacttcttttttctctc 843  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||||    
T  28203562 agtagtgatatttgaacaaccaacttatttgacaacttcttttttctctc 28203513  T

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Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 4896420 - 4896460
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  4896420 aacttttgtgacaacctcttttttctctcttttcattggtc 4896460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 822 - 854
Target Start/End: Complemental strand, 31240792 - 31240760
Alignment:
Q  822 gtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||||||||||||||||||    
T  31240792 gtgacaacttcttttttctctcttttcattggt 31240760  T

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Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 31275297 - 31275257
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  31275297 aacttttgtgacaatttcttttttctctcttttcattggtc 31275257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 35580261 - 35580221
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  35580261 aacttatgtgacaacttttttttcctctcttttcattggtc 35580221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 822 - 854
Target Start/End: Original strand, 48372153 - 48372185
Alignment:
Q  822 gtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||||||||||||||||||    
T  48372153 gtgacaacttcttttttctctcttttcattggt 48372185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 929 - 961
Target Start/End: Original strand, 51389112 - 51389144
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttct 961  Q
    |||||||||||||||||||||||||||||||||    
T  51389112 ttgttacaaagtggttgtacaaatatcatttct 51389144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 851
Target Start/End: Complemental strand, 51389467 - 51389431
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcatt 851  Q
    ||||| |||||||||||||||||||||||||||||||    
T  51389467 aacttttgtgacaacttcttttttctctcttttcatt 51389431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 936 - 971
Target Start/End: Original strand, 45257209 - 45257244
Alignment:
Q  936 aaagtggttgtacaaatatcatttcttcaaaaataa 971  Q
    |||||| |||||||||||||||||||||||||||||    
T  45257209 aaagtgattgtacaaatatcatttcttcaaaaataa 45257244  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Complemental strand, 31658064 - 31658030
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||||| |||||||||||||    
T  31658064 tgtgacaacttcttttttctcacttttcattggtc 31658030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Complemental strand, 34974598 - 34974564
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||||| |||||||||||||    
T  34974598 tgtgacaacttcttttttctcacttttcattggtc 34974564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 3981869 - 3981910
Alignment:
Q  150 tgaggatggatgagtggcaaccgtggcggaaaatgctccggt 191  Q
    |||||||||||||| |||||| ||||||||||||| ||||||    
T  3981869 tgaggatggatgagaggcaacggtggcggaaaatgttccggt 3981910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 821 - 854
Target Start/End: Original strand, 28480464 - 28480497
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||| |||||||||||||||||    
T  28480464 tgtgacaacttcttttctctctcttttcattggt 28480497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 821 - 854
Target Start/End: Original strand, 28481338 - 28481371
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||| |||||||||||||||||    
T  28481338 tgtgacaacttcttttctctctcttttcattggt 28481371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 821 - 854
Target Start/End: Original strand, 28482213 - 28482246
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||| |||||||||||||||||    
T  28482213 tgtgacaacttcttttctctctcttttcattggt 28482246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 932 - 961
Target Start/End: Original strand, 53091260 - 53091289
Alignment:
Q  932 ttacaaagtggttgtacaaatatcatttct 961  Q
    ||||||||||||||||||||||||||||||    
T  53091260 ttacaaagtggttgtacaaatatcatttct 53091289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 2e-42; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 149 - 449
Target Start/End: Complemental strand, 32418680 - 32418380
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggt 248  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||| ||| |||||||    ||| | ||||| ||||||||    ||||||||||||     
T  32418680 gtgaggatggatgaatggcaacggtggcggaaaatgctacggtgtgatggtaaaggctttcagtacggtggcgaggaatccttataatggaacgaaagga 32418581  T
Q  249 gtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatga 348  Q
    | |||||||||||| ||| || | |||||||| ||| | ||| |||  ||||||||||| |||| ||||||||||| |  ||||| |||||| |||||||    
T  32418580 gcctgcaggcacgtcaacactctgacgctcaagtcactgatggaacagagaaagagtgtgtagagagtgttgtgaagagtgaatcataccttgaggatga 32418481  T
Q  349 agcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacgtgtaggatgaccct 448  Q
    |||| |||||| ||| ||||| |  || || ||| ||||||||||||| ||||||||| ||||||||| |  |||||  ||||||||||||| ||| |||    
T  32418480 agcaagttcacccttgtatagacgtgcgttaagcttaactgtctccgggttatgcggcgtgtgattagggatggttaggggacacgtgtagggtgatcct 32418381  T
Q  449 c 449  Q
    |    
T  32418380 c 32418380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 135 - 438
Target Start/End: Complemental strand, 26994814 - 26994511
Alignment:
Q  135 ttttgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcg 234  Q
    ||||||||||||  ||||||||||||||| || ||| |||| ||||| ||||||| ||||||||||| || ||||| ||| | || || || |||||||     
T  26994814 ttttgatttgtccggtgaggatggatgagaggtaacagtggtggaaagtgctccgatgtgacggtgatggtttctggtacggtggtgacgagtccttgca 26994715  T
Q  235 gtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcg 334  Q
    |||| || |||||||||| ||| ||||||| | ||   |||||||| ||| ||||| || | ||||||||||| ||||| ||||||||||||  |||||     
T  26994714 gtgggacaaaaggtgtcttcagacacgttagcactccgacgctcaagtcagtaatggaattgagaaagagtgtttagaaggtgttgtgaaaagtgaatca 26994615  T
Q  335 taccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacg 434  Q
    ||||||  || ||||||| | |||| ||||||||||| ||| |||||  |||| |||| ||  || |||||| ||||||||| | || ||| |||||||     
T  26994614 taccttgggggtgaagcaaggtcacccttatataggcgcgcgttgagagtaaccgtcttcgagttttgcggcgtgtgattagggacgattagaggacaca 26994515  T
Q  435 tgta 438  Q
    ||||    
T  26994514 tgta 26994511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 235 - 416
Target Start/End: Original strand, 22865744 - 22865925
Alignment:
Q  235 gtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcg 334  Q
    |||||||||||||||  |||||| |||||| | |||| |||||||| | | ||||| |||| ||||| ||||| ||  || |||||||||||  ||   |    
T  22865744 gtggaacgaaaggtgcatgcaggtacgttagcactttgacgctcaagttagtaatggaactgagaaaaagtgtgtaagaaatgttgtgaaaagtgatgtg 22865843  T
Q  335 taccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    |||||| ||| ||||||| |||||| |||||||||||  || |||  |||||| || ||||||||||||| | |||||||||    
T  22865844 taccttgagggtgaagcaagttcacccttatataggcgtgcgttggccataaccgtttccggattatgcgacttgtgattag 22865925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 232 - 349
Target Start/End: Original strand, 22903073 - 22903190
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||||||||||||| |  | ||||| |||| | ||| ||||||||| ||| ||||| |||| ||||||||||| ||||||||||||||||||  |||    
T  22903073 gcggtggaacgaaaggttttcgtaggcatgttagcacttcaacgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 22903172  T
Q  332 tcgtaccttaaggatgaa 349  Q
    || |||||| ||| ||||    
T  22903173 tcataccttgagggtgaa 22903190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 212 - 435
Target Start/End: Complemental strand, 27083368 - 27083146
Alignment:
Q  212 tacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatag 311  Q
    ||||| |||||||| || | ||||| |||||||| |||||||||| ||||||| | ||  ||| ||||| ||| ||| ||||||  |||||||||| |||    
T  27083368 tacagtggcgaagagtcttcgcggtagaacgaaatgtgtctgcagacacgttagcactccaacactcaagtcagtaa-gaaactgtgaaagagtgtgtag 27083270  T
Q  312 aaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtg 411  Q
    |||||||||||||||  ||||| |||||| ||| |||||     |||| |||  |||||| || | |||| |||||||||||| | || |||||| ||||    
T  27083269 aaagtgttgtgaaaagtgaatcataccttgagggtgaagttaagtcacccttgcataggcgcg-cgtgagaataactgtctccaggttttgcggcgtgtg 27083171  T
Q  412 attagag-gcggttataggacacgt 435  Q
    ||||||| || |||| |||||||||    
T  27083170 attagagagcagttagaggacacgt 27083146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 181 - 416
Target Start/End: Original strand, 25537334 - 25537569
Alignment:
Q  181 aatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaa 280  Q
    ||||||| ||||||||||| | || |||||  || |||||||||| || | |||||||||||||||||| ||||| |||||||| | ||  |||||||||    
T  25537334 aatgctctggtgtgacggtaacggtttctggcacggcggcgaagagtcttcgcggtggaacgaaaggtgcctgcaagcacgttagcactccaacgctcaa 25537433  T
Q  281 ctcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttga 380  Q
         ||||| |||| ||||||| ||| ||  ||||||||||||||  ||    |||||| ||| ||||| | |||||| ||||||||||| |||||||     
T  25537434 gattgtaatggaactgagaaagattgtgtatgaagtgttgtgaaaagtgatgtataccttgagggtgaagaaagttcacccttatataggcgcgccttgg 25537533  T
Q  381 gcataactgtctccggattatgcggcatgtgattag 416  Q
     || ||| |||||| | ||||| | | |||||||||    
T  25537534 ccaaaaccgtctccaggttatgtgacgtgtgattag 25537569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 19376052 - 19376092
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19376052 aacttatgtgacaacttcttttttctctcttttcattggtc 19376092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 273 - 368
Target Start/End: Original strand, 25333756 - 25333851
Alignment:
Q  273 acgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatata 368  Q
    |||||||| ||| ||||| |||||||| ||||||| ||||||||||||| ||||  ||||| ||| || ||  ||||||| |||||||||||||||    
T  25333756 acgctcaagtcagtaatgtaactaagagagagtgtgtagaaagtgttgttaaaagtgaatcatactttgagagtgaagcaagttcactcttatata 25333851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 307
Target Start/End: Original strand, 16621189 - 16621263
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgt 307  Q
    |||||||||||||||||| || |||||||||||| ||| |||||||||  ||||| || |||| |||||||||||    
T  16621189 cggtggaacgaaaggtgtatgtaggcacgttaacacttcaacgctcaagccaatattggaactgagaaagagtgt 16621263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 26348191 - 26348125
Alignment:
Q  231 tgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaa 297  Q
    |||||||||||||||||||||||||||||||||| | ||  ||||||||| ||| ||||| ||||||    
T  26348191 tgcggtggaacgaaaggtgtctgcaggcacgttagcactccaacgctcaagtcattaatggaactaa 26348125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 232 - 396
Target Start/End: Original strand, 20025263 - 20025426
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||| ||||||||||||||||  ||||||||| ||  ||||||    |||  ||||||||| ||||||||||| |||||||||||||| |||  |||    
T  20025263 gcggtgggacgaaaggtgtctgcacacacgttaacactccaacgctactgtcaggaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaa 20025362  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccgg 396  Q
    || | |||| ||| ||||||  | |||| |||||| |||| || | |||| ||||| ||||||||    
T  20025363 tcattccttgagggtgaagctaggtcacccttatacaggcgcg-cgtgagaataaccgtctccgg 20025426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 39595425 - 39595385
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  39595425 aacttttgtgacaacttcttttttctctcttttcattggtc 39595385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 794 - 852
Target Start/End: Complemental strand, 471984 - 471928
Alignment:
Q  794 gagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattg 852  Q
    |||||||| |||||||||||| |  |||| |||||||||||||||||||||||||||||    
T  471984 gagtagtgttatttgaacaatca--tatgagacaacttcttttttctctcttttcattg 471928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 813 - 855
Target Start/End: Complemental strand, 11666332 - 11666290
Alignment:
Q  813 ataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||| ||| |||||||||||||||||||||||||||||||    
T  11666332 ataacttttgtaacaacttcttttttctctcttttcattggtc 11666290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 821 - 854
Target Start/End: Original strand, 5130304 - 5130337
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||||||||||||||||||||||||||||||||    
T  5130304 tgtgacaacttcttttttctctcttttcattggt 5130337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 125243 - 125203
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  125243 aacttttgcgacaacttcttttttctctcttttcattggtc 125203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 822 - 854
Target Start/End: Complemental strand, 10232643 - 10232611
Alignment:
Q  822 gtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||||||||||||||||||    
T  10232643 gtgacaacttcttttttctctcttttcattggt 10232611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 822 - 854
Target Start/End: Original strand, 12661874 - 12661906
Alignment:
Q  822 gtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||||||||||||||||||    
T  12661874 gtgacaacttcttttttctctcttttcattggt 12661906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 20719935 - 20719975
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  20719935 aacttttgtgacaacttcttttctctctcttttcattggtc 20719975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 28811579 - 28811539
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| ||||||||| |||||||||||||||||||||||||    
T  28811579 aacttttgtgacaacctcttttttctctcttttcattggtc 28811539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 29402333 - 29402293
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  29402333 aacttatgtgacaacttcttttttctttctttttattggtc 29402293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 33567159 - 33567199
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  33567159 aacttttgtgacaatttcttttttctctcttttcattggtc 33567199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 792 - 855
Target Start/End: Complemental strand, 42909891 - 42909830
Alignment:
Q  792 ttgagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||| |||||||||||  |  |||| ||||||||||||| ||||||||||||||||||    
T  42909891 ttgagtagtgttatttgaacaacca--tatgagacaacttcttttctctctcttttcattggtc 42909830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 854
Target Start/End: Original strand, 2117560 - 2117599
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| |||||||||||||||||||||| |||||||||||    
T  2117560 aacttttgtgacaacttcttttttctcttttttcattggt 2117599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 854
Target Start/End: Complemental strand, 11306847 - 11306808
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| || |||||||||||||||||||||||||||||||    
T  11306847 aacttttgagacaacttcttttttctctcttttcattggt 11306808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 234 - 264
Target Start/End: Original strand, 24546329 - 24546359
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgtta 264  Q
    |||||||||||||||||||||||||||||||    
T  24546329 ggtggaacgaaaggtgtctgcaggcacgtta 24546359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 818 - 852
Target Start/End: Original strand, 33910011 - 33910045
Alignment:
Q  818 ttatgtgacaacttcttttttctctcttttcattg 852  Q
    ||||||||||||||||||| |||||||||||||||    
T  33910011 ttatgtgacaacttcttttctctctcttttcattg 33910045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Complemental strand, 34381157 - 34381123
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||| ||||||||||||||||||||||    
T  34381157 tgtgacaacttcgtttttctctcttttcattggtc 34381123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Original strand, 34767343 - 34767377
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||| ||||||||||||||||||    
T  34767343 tgtgacaacttcttttctctctcttttcattggtc 34767377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 825 - 854
Target Start/End: Complemental strand, 18449397 - 18449368
Alignment:
Q  825 acaacttcttttttctctcttttcattggt 854  Q
    ||||||||||||||||||||||||||||||    
T  18449397 acaacttcttttttctctcttttcattggt 18449368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 929 - 974
Target Start/End: Complemental strand, 18695351 - 18695306
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttcttcaaaaataatag 974  Q
    |||||||||| ||||||||||||||||||||||  ||||| |||||    
T  18695351 ttgttacaaaatggttgtacaaatatcatttctctaaaaagaatag 18695306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 821 - 854
Target Start/End: Original strand, 24431544 - 24431577
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||| |||||||||||||||||||||    
T  24431544 tgtgacaacttcatttttctctcttttcattggt 24431577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 813 - 854
Target Start/End: Original strand, 33243659 - 33243700
Alignment:
Q  813 ataacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||||| |||||||| || ||||||||||||||||||||||    
T  33243659 ataacttttgtgacaatttattttttctctcttttcattggt 33243700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 1e-34; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 244 - 415
Target Start/End: Original strand, 21416730 - 21416901
Alignment:
Q  244 aaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaag 343  Q
    |||||||||||| || ||||| | ||   |||||||| ||| |||||||||| ||||||||||| ||||||||||||||||||  |||||||||||||||    
T  21416730 aaggtgtctgcatgctcgttagcactccgacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgaaaaatgaatcgtaccttaag 21416829  T
Q  344 gatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgatta 415  Q
    | ||||||| |||||| ||| ||||||  ||| ||| ||||||| |||||||| ||||||||| ||||||||    
T  21416830 ggtgaagcaagttcacccttgtataggggcgcgttgggcataaccgtctccgggttatgcggcctgtgatta 21416901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 149 - 370
Target Start/End: Original strand, 24507355 - 24507575
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggt 248  Q
    ||||||||||||||| |||||| ||| |||| |||||||| |||||||||||| || ||| | ||| ||||  | || || |||||||||| ||||||||    
T  24507355 gtgaggatggatgagaggcaacggtgacggataatgctccagtgtgacggtgacggtttcgg-tacggcggtaatgagtctttgcggtggagcgaaaggt 24507453  T
Q  249 gtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatga 348  Q
    ||||||| ||||||||   ||  |||| |||| ||||||||| || | ||||||||||| ||||||||||||||||||  ||||| |||||| ||| |||    
T  24507454 gtctgcatgcacgttagtactccaacgatcaagtcaataatggaaatgagaaagagtgtctagaaagtgttgtgaaaagtgaatcataccttgagggtga 24507553  T
Q  349 agcaggttcactcttatatagg 370  Q
    || |||||||| | ||||||||    
T  24507554 agtaggttcacccatatatagg 24507575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 240 - 416
Target Start/End: Original strand, 13754746 - 13754921
Alignment:
Q  240 acgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtacct 339  Q
    |||||||||| |||| ||||||||||| ||  | ||||||| ||| |||||||||| ||||||||||| |||||||||||||| |||  ||||| |||||    
T  13754746 acgaaaggtgcctgctggcacgttaacactacatcgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgtaaagtgaatcctacct 13754845  T
Q  340 taaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    | ||| ||||||    ||||||||||||||||||| | |||| ||||| |||| |||||| |||||| |||||||||    
T  13754846 tgagggtgaagctaagtcactcttatataggcacg-catgagaataaccgtcttcggattttgcggcgtgtgattag 13754921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 235 - 416
Target Start/End: Complemental strand, 24576691 - 24576510
Alignment:
Q  235 gtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaat-c 333  Q
    ||||||||||||||| |||||||||||||||| || | |||||||| ||| ||||| |||||| || |||||| ||  |||||||||||||| | |||      
T  24576691 gtggaacgaaaggtgcctgcaggcacgttaacactctgacgctcaagtcagtaatggaactaaaaatgagtgtgtaagaagtgttgtgaaaa-gtaatgt 24576593  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||||||| ||| ||||| | |||||| ||||||||||||||| |||| |||||| | |||| | ||||||| | |||||||||    
T  24576592 gtaccttgagggtgaaggaagttcacccttatataggcacgcgttgatcataaccgcctccaggttatgcgacgtgtgattag 24576510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 232 - 433
Target Start/End: Original strand, 18322923 - 18323124
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    |||||||||| |||||||  ||||| || |||||| ||  ||||||||| ||| ||||  |||| ||||||| ||| |||||| |||||||||||  |||    
T  18322923 gcggtggaacaaaaggtgcatgcagacatgttaacactccaacgctcaagtcagtaatagaactgagaaagattgtgtagaaaatgttgtgaaaagtgaa 18323022  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggac 431  Q
    || ||| || ||||||||||| | |||| |||||||||||| |  ||||| ||||||| |||||| ||  ||||| ||||||||| |  ||||| |||||    
T  18323023 tcatacattgaggatgaagcaaggtcacccttatataggcaagagttgagaataactgcctccgggtttcgcggcgtgtgattagggatggttagaggac 18323122  T
Q  432 ac 433  Q
    ||    
T  18323123 ac 18323124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 236 - 416
Target Start/End: Complemental strand, 26917005 - 26916825
Alignment:
Q  236 tggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgt 335  Q
    ||||||||||||||  |  |||||||||| |||  |||||||||| ||| ||||| |||| ||| ||||||| ||||||||||||||||||  || || |    
T  26917005 tggaacgaaaggtgcatttaggcacgttagcgcactaacgctcaagtcagtaatggaactgagagagagtgtgtagaaagtgttgtgaaaagtgagtcat 26916906  T
Q  336 accttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||||| || ||||||||   || | ||||||||||| ||| ||||| ||||| | |||| | || |||||| |||||||||    
T  26916905 accttgagcatgaagcaatgtcgcccttatataggcgcgcgttgagaataaccgcctccaggttttgcggcgtgtgattag 26916825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 794 - 855
Target Start/End: Complemental strand, 426270 - 426212
Alignment:
Q  794 gagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  426270 gagtagtgatatttgaacaa---cttatgtgacaacttcttttttctctcttttcattggtc 426212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 240 - 371
Target Start/End: Original strand, 30477629 - 30477760
Alignment:
Q  240 acgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtacct 339  Q
    ||||||| |||||||| |||||||| | ||  ||||||||| ||| ||| |||||| ||||||||||| ||||||||||||||||||  ||||| |||||    
T  30477629 acgaaagatgtctgcatgcacgttagcactccaacgctcaagtcagtaacgaaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcatacct 30477728  T
Q  340 taaggatgaagcaggttcactcttatataggc 371  Q
    | ||| ||||| |   |||| |||||||||||    
T  30477729 tgagggtgaagtaatgtcacccttatataggc 30477760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 251 - 439
Target Start/End: Original strand, 5859814 - 5860002
Alignment:
Q  251 ctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaag 350  Q
    |||||| ||||||| | ||  ||||||||| ||||||||| |||||||||| ||||| | || |||||| ||| ||  |||||||||||| ||  |||||    
T  5859814 ctgcagacacgttagcactccaacgctcaagtcaataatggaactaagaaatagtgtgttgagagtgttttgagaagtgaatcgtaccttgagattgaag 5859913  T
Q  351 caggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacgtgtag 439  Q
    || | |||| ||||||||||| ||| |||   ||||| | ||| ||||| ||||||  |||||||| | |||||| | |||||||||||    
T  5859914 caaggtcacccttatataggcgcgcgttggaaataaccgcctctggattttgcggcgagtgattagggacggttaaatgacacgtgtag 5860002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 241 - 371
Target Start/End: Complemental strand, 3459586 - 3459456
Alignment:
Q  241 cgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgtt-gtgaaaatggaatcgtacct 339  Q
    ||||||||| |||||||||||||| | ||    ||||||| ||| ||||| |||| || |||||||| ||||||||||| |||||||   ||||||||||    
T  3459586 cgaaaggtgcctgcaggcacgttagcactccggcgctcaagtcagtaatggaactgagcaagagtgtgtagaaagtgttggtgaaaagtaaatcgtacct 3459487  T
Q  340 taaggatgaagcaggttcactcttatataggc 371  Q
    | ||| ||||||| |||||| |||||||||||    
T  3459486 tgagg-tgaagcaagttcacccttatataggc 3459456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 817 - 855
Target Start/End: Original strand, 26507825 - 26507863
Alignment:
Q  817 cttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26507825 cttatgtgacaacttcttttttctctcttttcattggtc 26507863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 297 - 442
Target Start/End: Complemental strand, 17698331 - 17698186
Alignment:
Q  297 agaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccgg 396  Q
    ||||||||||| ||||||||||||||||||  ||||  ||| || ||| ||||||| |  ||| | ||||||||| ||| | ||||||||| |||| ||     
T  17698331 agaaagagtgtgtagaaagtgttgtgaaaagtgaattatactttgagggtgaagcaaggccacccatatataggcgcgcgtcgagcataaccgtcttcga 17698232  T
Q  397 attatgcggcatgtgattagaggcggttataggacacgtgtaggat 442  Q
    |||  ||||| ||||||||| | |||||| ||||||| | ||||||    
T  17698231 atttagcggcgtgtgattagggacggttaaaggacacatataggat 17698186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 851
Target Start/End: Complemental strand, 3989056 - 3989020
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcatt 851  Q
    |||||||||||||||||||||||||||||||||||||    
T  3989056 aacttatgtgacaacttcttttttctctcttttcatt 3989020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 22767281 - 22767241
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  22767281 aacttttgtgacaacttcttttttctctcttttcattggtc 22767241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 27836331 - 27836291
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  27836331 aacttatgtgacaacttcttttctctctcttttcattggtc 27836291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 231 - 413
Target Start/End: Complemental strand, 4565505 - 4565323
Alignment:
Q  231 tgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatgga 330  Q
    ||||||||||||||||||||||||||||| |||| | ||   ||  |||| | | |||||||||| | | |||  |||||  ||||||||||||||  |     
T  4565505 tgcggtggaacgaaaggtgtctgcaggcatgttagcactccgacaatcaagttagtaatgaaactgaaagagaaagtataagaagtgttgtgaaaagtgt 4565406  T
Q  331 atcgtaccttaaggatgaagcaggttcactcttatataggcacgc-cttgagcataactgtctccggattatgcggcatgtgat 413  Q
       ||||||| ||| ||||||| |||||| |||||||| || ||| | || |||||||||||||||| ||||||||| ||||||    
T  4565405 tgtgtaccttgagggtgaagcaagttcacccttatataagcgcgctcgtg-gcataactgtctccgggttatgcggcgtgtgat 4565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 821 - 855
Target Start/End: Complemental strand, 23258177 - 23258143
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||||||||||||||||    
T  23258177 tgtgacaacttcttttttctctcttttcattggtc 23258143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 794 - 855
Target Start/End: Complemental strand, 42996632 - 42996573
Alignment:
Q  794 gagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||| |||||||||||| |   ||| ||||||||||||||||||||||||||||||||    
T  42996632 gagtagtgttatttgaacaatcaa--atgagacaacttcttttttctctcttttcattggtc 42996573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 276 - 349
Target Start/End: Complemental strand, 6928157 - 6928084
Alignment:
Q  276 ctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaa 349  Q
    ||||| ||| ||||| |||| ||||||||||| ||||||||||||||||||  ||||| |||||| ||| ||||    
T  6928157 ctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaa 6928084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 20055530 - 20055591
Alignment:
Q  203 ggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggcacgtta 264  Q
    |||||| | ||| ||||||| ||||| | ||||||||||||| |||||||||||||||||||    
T  20055530 ggcttccggtacggcggcgatgaatcttcgcggtggaacgaagggtgtctgcaggcacgtta 20055591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 929 - 961
Target Start/End: Original strand, 1370312 - 1370344
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttct 961  Q
    |||||||||||||||||||||||||||||||||    
T  1370312 ttgttacaaagtggttgtacaaatatcatttct 1370344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 822 - 854
Target Start/End: Original strand, 37101613 - 37101645
Alignment:
Q  822 gtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||||||||||||||||||    
T  37101613 gtgacaacttcttttttctctcttttcattggt 37101645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 814 - 854
Target Start/End: Complemental strand, 42689937 - 42689897
Alignment:
Q  814 taacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||| |||||||| |||||||||||||||||||||||||    
T  42689937 taacttttgtgacaatttcttttttctctcttttcattggt 42689897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 854
Target Start/End: Complemental strand, 7678883 - 7678844
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  7678883 aacttttgtaacaacttcttttttctctcttttcattggt 7678844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 317
Target Start/End: Original strand, 23269224 - 23269311
Alignment:
Q  230 ttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtg 317  Q
    ||||||||||||||||||||||| |||||| |||| | ||  ||| || || ||| ||||| |||| | ||||||||| |||||||||    
T  23269224 ttgcggtggaacgaaaggtgtctacaggcaagttagcactccaacacttaagtcagtaatggaactgataaagagtgtgtagaaagtg 23269311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 812 - 855
Target Start/End: Original strand, 37524345 - 37524388
Alignment:
Q  812 aataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||| | ||||||||| |||||||||||||||||||||||||    
T  37524345 aataacctttgtgacaacctcttttttctctcttttcattggtc 37524388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 822 - 853
Target Start/End: Original strand, 42543408 - 42543439
Alignment:
Q  822 gtgacaacttcttttttctctcttttcattgg 853  Q
    ||||||||||||||||||||||||||||||||    
T  42543408 gtgacaacttcttttttctctcttttcattgg 42543439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 825 - 855
Target Start/End: Complemental strand, 896048 - 896018
Alignment:
Q  825 acaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||||||||||||    
T  896048 acaacttcttttttctctcttttcattggtc 896018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 135 - 181
Target Start/End: Complemental strand, 6928262 - 6928216
Alignment:
Q  135 ttttgatttgtctagtgaggatggatgagtggcaaccgtggcggaaa 181  Q
    ||||||| ||||| ||||||||||||||| |||||| ||||||||||    
T  6928262 ttttgatctgtctggtgaggatggatgagaggcaacagtggcggaaa 6928216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Complemental strand, 28927826 - 28927792
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||| ||||||||||||||||||    
T  28927826 tgtgacaacttcttttctctctcttttcattggtc 28927792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Original strand, 38128452 - 38128486
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||||| |||||||||||||    
T  38128452 tgtgacaacttcttttttctcacttttcattggtc 38128486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 1909821 - 1909744
Alignment:
Q  230 ttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgt 307  Q
    |||| |||||||||||||||  ||||| ||||||| |  || |||||| || ||| |||||||||| |||||||||||    
T  1909821 ttgcagtggaacgaaaggtgcatgcagacacgttagcatttcaacgctaaagtcagtaatgaaactgagaaagagtgt 1909744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 821 - 854
Target Start/End: Original strand, 16011843 - 16011876
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||| |||||||||||||||||||||||||    
T  16011843 tgtgacaatttcttttttctctcttttcattggt 16011876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 313 - 438
Target Start/End: Original strand, 20055625 - 20055748
Alignment:
Q  313 aagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtga 412  Q
    ||||||||||||||  ||   |||||||| || ||||||| |||||  ||||||||||| |||||||||||||||  ||||||    ||||||  | |||    
T  20055625 aagtgttgtgaaaagtgatgtgtaccttaggg-tgaagcaagttcatccttatataggcgcgccttgagcataaccatctccgtgagatgcggggtatga 20055723  T
Q  413 ttagaggcggttataggacacgtgta 438  Q
    |||| ||||||||| |||||||||||    
T  20055724 ttag-ggcggttatgggacacgtgta 20055748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 323
Target Start/End: Original strand, 24070886 - 24070923
Alignment:
Q  286 taatgaaactaagaaagagtgtatagaaagtgttgtga 323  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  24070886 taatggaactaagaaagagtgtgtagaaagtgttgtga 24070923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 825 - 854
Target Start/End: Original strand, 28473475 - 28473504
Alignment:
Q  825 acaacttcttttttctctcttttcattggt 854  Q
    ||||||||||||||||||||||||||||||    
T  28473475 acaacttcttttttctctcttttcattggt 28473504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 818 - 847
Target Start/End: Complemental strand, 42047483 - 42047454
Alignment:
Q  818 ttatgtgacaacttcttttttctctctttt 847  Q
    ||||||||||||||||||||||||||||||    
T  42047483 ttatgtgacaacttcttttttctctctttt 42047454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 73; Significance: 8e-33; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 159 - 371
Target Start/End: Original strand, 26977647 - 26977859
Alignment:
Q  159 atgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggc 258  Q
    |||||||||||| |||||||||| ||||  ||| |||| || | || ||| | |||||||| || ||||| |||||||||||||||||||| ||||||||    
T  26977647 atgagtggcaacggtggcggaaagtgctatggtatgacagtaacggtttccggtacagcggtgatgaatctttgcggtggaacgaaaggtgcctgcaggc 26977746  T
Q  259 acgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttca 358  Q
    |||||| | ||  ||||||||| ||| ||||| |||  ||||||||||| |||||||| |||||||||  ||||| |||||| ||| |||||||  || |    
T  26977747 acgttagcactccaacgctcaagtcagtaatggaaccgagaaagagtgtgtagaaagtattgtgaaaaatgaatcataccttgagggtgaagcaatttga 26977846  T
Q  359 ctcttatataggc 371  Q
    | |||||||||||    
T  26977847 cccttatataggc 26977859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 149 - 415
Target Start/End: Original strand, 22414672 - 22414938
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggt 248  Q
    |||||||||||||||||||||| |||||  | ||||||||| ||||||   || || |||   ||| | | ||| || || |||||||||||||||||||    
T  22414672 gtgaggatggatgagtggcaacagtggcaaataatgctccgttgtgacaacgacggtttccagtacggtgacgatgagtctttgcggtggaacgaaaggt 22414771  T
Q  249 gtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatga 348  Q
    | | |||||||||||| | || | |||||||| ||| |||||||||| | ||| ||||| ||||||||||||||||||  ||||| || ||| ||| |||    
T  22414772 gcccgcaggcacgttagcactctgacgctcaagtcagtaatgaaactgaaaaaaagtgtgtagaaagtgttgtgaaaagtgaatcatatcttgagggtga 22414871  T
Q  349 agcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgatta 415  Q
    |||| |||||  ||| |||||||| || | ||||||||| |||||||  ||||||||| | ||||||    
T  22414872 agcaagttcatccttgtataggcatgcgtcgagcataacggtctccgtgttatgcggcgtatgatta 22414938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 232 - 416
Target Start/End: Original strand, 12177366 - 12177550
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    |||||||||||||||||| || || |||||||| | ||   || ||||| ||| ||||| |||| ||||||||||| ||||||||||||||||||  |||    
T  12177366 gcggtggaacgaaaggtgcctacatgcacgttagcactccgacactcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaa 12177465  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    |  |||||| |||| |||||| |||||  ||||||||||  ||| ||| |||||||||||||||  ||||||||||| |||||||    
T  12177466 ttataccttgaggaggaagcaagttcaaccttatataggtgcgcattgggcataactgtctccgagttatgcggcatttgattag 12177550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 232 - 450
Target Start/End: Original strand, 16050374 - 16050592
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||||  ||||||| ||||||||||||||| | ||  ||||||||| ||| | ||| |||| ||||||||||| |||||||||| |||||||  |||    
T  16050374 gcggtggatagaaaggtatctgcaggcacgttagcactccaacgctcaagtcattgatggaactgagaaagagtgtgtagaaagtgtggtgaaaagtgaa 16050473  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggac 431  Q
     | |||||| |||||||||||    ||| ||||||||||  ||| ||| | |||| |   |||||||| |||||  |||||||| || | |||| |||||    
T  16050474 ccataccttgaggatgaagcaatgccacccttatataggtgcgcattgggaataaatcattccggattttgcggtgtgtgattaaagacagttagaggac 16050573  T
Q  432 acgtgtaggatgaccctca 450  Q
    ||||||||| ||| |||||    
T  16050574 acgtgtagggtgatcctca 16050592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 137 - 416
Target Start/End: Complemental strand, 4601693 - 4601414
Alignment:
Q  137 ttgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggt 236  Q
    ||||| ||||| ||||| | || ||||| ||||| ||||| |||||||||| ||||||||||| |  | ||| |  |  |||||||  | || | |||||    
T  4601693 ttgatctgtctggtgagaacggttgagtagcaacggtggcagaaaatgctctggtgtgacggtaattgtttccggcatggcggcgataagtcttcgcggt 4601594  T
Q  237 ggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgta 336  Q
    ||||||||||||| |||||||||||||| | ||   |||||||| ||| |||||||||| ||||| | ||| ||  ||||| ||||||| | ||   ||     
T  4601593 ggaacgaaaggtgactgcaggcacgttagcactccgacgctcaagtcagtaatgaaactgagaaataatgtgtaataagtgctgtgaaatttgatgtgtc 4601494  T
Q  337 ccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    |||| ||| ||||||| |||||| |||||||| || ||| |||  |||| | |||||||| ||||||| | |||||||||    
T  4601493 ccttgagggtgaagcaagttcacccttatatacgcgcgcattggtcatagccgtctccgggttatgcgccgtgtgattag 4601414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 137 - 416
Target Start/End: Complemental strand, 14255236 - 14254969
Alignment:
Q  137 ttgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggt 236  Q
    ||||| ||||||||||| | || ||||| ||||| | ||| || ||||||||||||||||||| | |||||| |   | ||||||| || || | | |||    
T  14255236 ttgatctgtctagtgagaacggttgagtagcaacggcggcagagaatgctccggtgtgacggtaatggcttccggcgcggcggcgatgagtcttcgtggt 14255137  T
Q  237 ggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgta 336  Q
    |||||||| |||| ||||| ||||| || | ||  ||||||||| ||| |||||||||| ||||||||||| ||  |||||||||            |||    
T  14255136 ggaacgaagggtgcctgcaagcacgatagcactccaacgctcaagtcattaatgaaactgagaaagagtgtgtaagaagtgttgt------------gta 14255049  T
Q  337 ccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    |||| ||| |||| || |||||| ||||||||||||||| |||  ||||||| ||||| | ||||||||| | |||||||    
T  14255048 ccttgagggtgaaacaagttcacccttatataggcacgctttggtcataactttctccaggttatgcggcgtatgattag 14254969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 238 - 416
Target Start/End: Complemental strand, 23728925 - 23728747
Alignment:
Q  238 gaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtac 337  Q
    ||||||||||||  ||||||||||||| |  | | |||||||| ||| ||||| || | ||||||||||| ||  ||||||||||||||  ||   ||||    
T  23728925 gaacgaaaggtggatgcaggcacgttagcattatgacgctcaagtcattaatggaaatgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtac 23728826  T
Q  338 cttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||| ||| |||| || |||||| ||||||||||| | | |||  |||||| |||| |  ||||||||||||||||||||    
T  23728825 cttgagggtgaaacaagttcacccttatataggcgcacgttggccataaccgtcttcaaattatgcggcatgtgattag 23728747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 340
Target Start/End: Original strand, 16030376 - 16030483
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaat 332  Q
    |||||||| ||||||||||||||||||||||| |  |  || |||||| ||| ||||| |||| |  |||||||| ||||||||||||||||||  ||||    
T  16030376 cggtggaatgaaaggtgtctgcaggcacgttatcagtcaaatgctcaagtcagtaatggaactgaataagagtgtgtagaaagtgttgtgaaaagtgaat 16030475  T
Q  333 cgtacctt 340  Q
    | ||||||    
T  16030476 catacctt 16030483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 307
Target Start/End: Complemental strand, 23280454 - 23280296
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggt 248  Q
    ||||||||| |||||||||||| |||||||||| ||||| |||| |||||||| || ||| | ||    || || ||||||||| | |||||||||||||    
T  23280454 gtgaggatgaatgagtggcaacggtggcggaaagtgctctggtgagacggtgacggtttccggtatgttggtgatgaatccttgtgatggaacgaaaggt 23280355  T
Q  249 gtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgt 307  Q
    | |||||| || |||| | ||  ||| ||||| ||| ||||| |||| |||||| ||||    
T  23280354 gcctgcagacatgttatcactcaaactctcaagtcagtaatggaactgagaaagtgtgt 23280296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 22389445 - 22389485
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  22389445 aacttttgtgacaacttcttttttctctcttttcattggtc 22389485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 50659112 - 50659152
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  50659112 aacttatgtgacaacttcttttctctctcttttcattggtc 50659152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 243 - 326
Target Start/End: Original strand, 5671761 - 5671844
Alignment:
Q  243 aaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    |||||||| || |||||||||| | ||  ||||||||| | | ||||| |||| ||||||||||| ||||||||||||||||||    
T  5671761 aaaggtgtttgtaggcacgttagcactccaacgctcaagttagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaa 5671844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 794 - 855
Target Start/End: Original strand, 16836016 - 16836074
Alignment:
Q  794 gagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||||   ||| ||||||||||||||||||||  |||||||||||||    
T  16836016 gagtagtgatatttgaacaa---cttttgtgacaacttcttttttcttacttttcattggtc 16836074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 231 - 422
Target Start/End: Original strand, 25408075 - 25408266
Alignment:
Q  231 tgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatgga 330  Q
    |||||||||| |||||||| |||||| ||||||| | ||  || |||||| ||| |||||||||| | | ||||||| ||  ||||||||||||||  ||    
T  25408075 tgcggtggaatgaaaggtgcctgcagacacgttagcactccaatgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtga 25408174  T
Q  331 atcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcgg 422  Q
       || |||| ||| ||||||| |||||| |||  ||||||  |  |||  ||||||||||||||| ||||  ||| |||||||||| ||||    
T  25408175 tgtgtcccttgagggtgaagcaagttcaccctttcataggcgtgttttgttcataactgtctccgggttataaggcgtgtgattagaagcgg 25408266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 236 - 367
Target Start/End: Original strand, 52565564 - 52565695
Alignment:
Q  236 tggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgt 335  Q
    |||||||||||||| |||||| ||||||| | || | |||||||| ||| ||| | |||| | ||||||||   |||||||||||||||||  ||||| |    
T  52565564 tggaacgaaaggtgcctgcagacacgttagcactctgacgctcaagtcagtaaaggaactgaaaaagagtgcgcagaaagtgttgtgaaaagtgaatcat 52565663  T
Q  336 accttaaggatgaagcaggttcactcttatat 367  Q
    | ||| ||| ||||||| |||||  |||||||    
T  52565664 aacttgagggtgaagcaagttcatccttatat 52565695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 160 - 326
Target Start/End: Complemental strand, 16299756 - 16299591
Alignment:
Q  160 tgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggca 259  Q
    ||||||||||| | ||  || ||||||||||||| || || | | |||| ||||| ||||||| || || |||||||||||||||| ||||||||| |||    
T  16299756 tgagtggcaacagcggtagagaatgctccggtgttaccgtaacgacttccgatacggcggcgatgagtc-ttgcggtggaacgaaacgtgtctgcatgca 16299658  T
Q  260 cgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    | ||| | ||   ||| |||| | | |||||||||| ||||||||||  ||  ||||||||||||||    
T  16299657 cattagcactccgacgttcaagtaagtaatgaaactgagaaagagtgcgtaagaagtgttgtgaaaa 16299591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 230 - 352
Target Start/End: Original strand, 34273065 - 34273187
Alignment:
Q  230 ttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatgg 329  Q
    ||||||||| |||||||||  ||||| |||||||| | ||  || |||||| ||| ||| | |||| ||||||||||| |||||||||||||| |||  |    
T  34273065 ttgcggtgggacgaaaggtacctgcaagcacgttagcactccaatgctcaagtcagtaacggaactgagaaagagtgtgtagaaagtgttgtgtaaagtg 34273164  T
Q  330 aatcgtaccttaaggatgaagca 352  Q
    | || |||||| ||| |||||||    
T  34273165 actcataccttgagggtgaagca 34273187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 1659899 - 1659806
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    |||||||||||||||||||| ||  ||||||| | ||  ||||||||| ||||||||| | || ||||||| ||| ||  ||||||||||||||    
T  1659899 cggtggaacgaaaggtgtctacatacacgttatcactccaacgctcaagtcaataatggatctgagaaagaatgtgtaagaagtgttgtgaaaa 1659806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 818 - 855
Target Start/End: Complemental strand, 34187412 - 34187375
Alignment:
Q  818 ttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||| |||||||||||||||||||||    
T  34187412 ttatgtgacaacttctcttttctctcttttcattggtc 34187375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 366808 - 366768
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  366808 aacttatgtgacaacttttttttcctctcttttcattggtc 366768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 5477083 - 5477123
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  5477083 aacttttgtgacaacttcttttttctctctttttattggtc 5477123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 929 - 961
Target Start/End: Original strand, 25098826 - 25098858
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttct 961  Q
    |||||||||||||||||||||||||||||||||    
T  25098826 ttgttacaaagtggttgtacaaatatcatttct 25098858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 818 - 854
Target Start/End: Original strand, 25302568 - 25302604
Alignment:
Q  818 ttatgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||| ||||||||||||||||||||||    
T  25302568 ttatgtgacaactttttttttctctcttttcattggt 25302604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 242 - 326
Target Start/End: Complemental strand, 33101608 - 33101524
Alignment:
Q  242 gaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    ||||||||  ||||||||||||| | ||  ||||||||| ||  ||||| |||| ||||| ||||| ||||||||||||||||||    
T  33101608 gaaaggtgcatgcaggcacgttagcactccaacgctcaagtcggtaatggaactgagaaaaagtgtgtagaaagtgttgtgaaaa 33101524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 39010965 - 39010925
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  39010965 aacttttgtgacaacttattttttctctcttttcattggtc 39010925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 40610380 - 40610340
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| |||||||||||||||| ||||||||||||||||||    
T  40610380 aacttttgtgacaacttcttttctctctcttttcattggtc 40610340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 854
Target Start/End: Complemental strand, 36418230 - 36418191
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  36418230 aacttttgtgacaacttcttttctctctcttttcattggt 36418191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 854
Target Start/End: Complemental strand, 37690566 - 37690527
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| |||||||||||||||| |||||||||||||||||    
T  37690566 aacttttgtgacaacttcttttctctctcttttcattggt 37690527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 929 - 972
Target Start/End: Original strand, 45740582 - 45740625
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttcttcaaaaataat 972  Q
    |||| |||||||||||||||||||||||||||| ||| ||||||    
T  45740582 ttgtcacaaagtggttgtacaaatatcatttctccaagaataat 45740625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 929 - 960
Target Start/End: Original strand, 51339738 - 51339769
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttc 960  Q
    ||||||||||||||||||||||||||||||||    
T  51339738 ttgttacaaagtggttgtacaaatatcatttc 51339769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 813 - 855
Target Start/End: Complemental strand, 10384681 - 10384639
Alignment:
Q  813 ataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||| ||||||||||||||||||| || |||||||||||||||    
T  10384681 ataatttatgtgacaacttcttttctcactcttttcattggtc 10384639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 16522759 - 16522829
Alignment:
Q  236 tggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtg 306  Q
    |||||||||||||||||| |||||||||| | ||| |||| |||| ||||||| | || | ||||||||||    
T  16522759 tggaacgaaaggtgtctgaaggcacgttagcacttcaacgttcaagtcaataaaggaattgagaaagagtg 16522829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 72; Significance: 3e-32; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 150 - 438
Target Start/End: Complemental strand, 8769 - 8486
Alignment:
Q  150 tgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtg 249  Q
    ||||||| |||||||| |||| |||||||| ||||||||| |||||| || |  | |||   ||| ||||||  || || |||||||||||  |||||||    
T  8769 tgaggatagatgagtgacaacggtggcggataatgctccgctgtgacagtaacagtttccagtacggcggcgttgagtctttgcggtggaataaaaggtg 8670  T
Q  250 tctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaa 349  Q
    | ||||| ||||||| | |||  |||||||| ||| |||||||||| | ||| ||||| ||||||||||||||||||  ||||| |||||||||| ||||    
T  8669 tttgcag-cacgttagcacttcgacgctcaagtcagtaatgaaactgaaaaacagtgtgtagaaagtgttgtgaaaagtgaatcataccttaagggtgaa 8571  T
Q  350 gcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacgtgta 438  Q
         ||||| ||||||||||| ||| ||||||||||| |||||||| |||||| || | |||||||||  ||||| | ||||||||||    
T  8570 ----cttcacccttatataggcgcgcgttgagcataaccgtctccgggttatgcagcgtttgattagagaaggttagatgacacgtgta 8486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 15500 - 15357
Alignment:
Q  273 acgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggca 372  Q
    |||||| | ||| ||||| |||| ||||||||| | ||||||||||||||||||  ||||| |||||| ||| ||||||| |||||| ||||||||||      
T  15500 acgctccagtcagtaatggaactgagaaagagtatctagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatataggtg 15401  T
Q  373 cgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    | | ||   |||||| || ||||||||||||| |||||||||||    
T  15400 cacgttagtcataaccgtgtccggattatgcgacatgtgattag 15357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 5e-31; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 149 - 326
Target Start/End: Original strand, 39879284 - 39879461
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggt 248  Q
    ||||| ||||||||| | |||| |||| ||||| ||||||||||||||||||| || ||| ||||| |    || ||||| | | |||||||||||||||    
T  39879284 gtgagaatggatgagagacaacggtggtggaaagtgctccggtgtgacggtgatggtttccgatacggtaatgatgaatcttcgtggtggaacgaaaggt 39879383  T
Q  249 gtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    | |||||| ||||||||| ||||||||||||| ||| |||||||||| ||||||||||| || |||||||||| ||||    
T  39879384 gcctgcagacacgttaacactttaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgttgtaaaaa 39879461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 234 - 416
Target Start/End: Complemental strand, 13292232 - 13292050
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    ||||||| |||||||||||||||| |||||| | || |||||||||| ||| |||||||||| | ||||||||| ||  ||||||||||||||  ||       
T  13292232 ggtggaaggaaaggtgtctgcaggtacgttagcactctaacgctcaagtcagtaatgaaactgaaaaagagtgtgtaagaagtgttgtgaaaagtgatgt 13292133  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||||||| ||| ||||||| ||||||  |||||||||| ||| |||  |||||| |||||||| ||||||||| |||| ||||    
T  13292132 gtaccttgagggtgaagcaagttcaccattatataggcgcgcgttggccataaccgtctccgggttatgcggcgtgtggttag 13292050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 181 - 416
Target Start/End: Complemental strand, 16987254 - 16987019
Alignment:
Q  181 aatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaa 280  Q
    ||||||||||||||||| | | |||||||| ||| ||||| | || || | ||||||||||||||||||  ||| ||||||||| | || | || |||||    
T  16987254 aatgctccggtgtgacgctaacggcttctggtacggcggcaatgagtcttcgcggtggaacgaaaggtgcatgcgggcacgttagcactctgacactcaa 16987155  T
Q  281 ctcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttga 380  Q
      || ||||| || | ||||||||||| ||  ||||||||||||||  ||   || |||||| | ||||||| |||||| ||||||||||| ||| |||     
T  16987154 gccagtaatggaattgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtcccttaaaggtgaagcaagttcacccttatataggcgcgcgttgg 16987055  T
Q  381 gcataactgtctccggattatgcggcatgtgattag 416  Q
     |||||| |||||||||||||||||  |||||||||    
T  16987054 ccataaccgtctccggattatgcggtgtgtgattag 16987019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 233 - 416
Target Start/End: Complemental strand, 9135471 - 9135288
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaat 332  Q
    |||||||||||||||||  |  |||||||||| | || |||||||||| ||| ||||| || | ||||||||||| || ||| |||||||||||  ||||    
T  9135471 cggtggaacgaaaggtgcatataggcacgttagcactctaacgctcaagtcagtaatggaattgagaaagagtgtgtaaaaactgttgtgaaaagtgaat 9135372  T
Q  333 cgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    | |||||| ||| |||||||  ||||| ||||||||| ||||  |||  |||||| |||||||| |||||  || |||||||||    
T  9135371 cataccttgagggtgaagcaaattcacccttatatagacacgtattggtcataaccgtctccgggttatgtagcgtgtgattag 9135288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 232 - 326
Target Start/End: Original strand, 21161222 - 21161315
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    ||||||||||||||| ||||||||||||||||| | ||  ||||||||| ||| ||||| | ||||||||| |||| ||||||||||||||||||    
T  21161222 gcggtggaacgaaag-tgtctgcaggcacgttagcactccaacgctcaagtcagtaatggagctaagaaagtgtgtgtagaaagtgttgtgaaaa 21161315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 230 - 366
Target Start/End: Original strand, 7486523 - 7486659
Alignment:
Q  230 ttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatgg 329  Q
    ||||||||||| ||||||||  ||||||||||||| | ||  ||||||||| ||| ||||| |||| ||||||| ||| ||||| ||||||||||||  |    
T  7486523 ttgcggtggaatgaaaggtgcatgcaggcacgttagcactccaacgctcaattcagtaatggaactgagaaagattgtgtagaaggtgttgtgaaaagtg 7486622  T
Q  330 aatcgtaccttaaggatgaagcaggttcactcttata 366  Q
    |||| | |||||| | ||||| | |||||| ||||||    
T  7486623 aatcatcccttaaaggtgaagaaagttcacccttata 7486659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 225 - 352
Target Start/End: Complemental strand, 26763029 - 26762902
Alignment:
Q  225 aatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaa 324  Q
    ||||||||||||||| ||||||||   ||||||||||||| | ||  ||||||||| ||| ||| | |||| | ||| ||||| ||||||||||||||||    
T  26763029 aatccttgcggtggagcgaaaggttcttgcaggcacgttagcactccaacgctcaagtcagtaaaggaactcataaatagtgtgtagaaagtgttgtgaa 26762930  T
Q  325 aatggaatcgtaccttaaggatgaagca 352  Q
    ||  ||||| |||||| ||| |||||||    
T  26762929 aagtgaatcataccttgagggtgaagca 26762902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 2790328 - 2790288
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  2790328 aacttatgtgacaacttcttttctctctcttttcattggtc 2790288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 139 - 438
Target Start/End: Original strand, 5863074 - 5863373
Alignment:
Q  139 gatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtgg 238  Q
    |||||||| |||||||||||||||||||||||  ||| ||||| | |||  |||||| ||| | || ||  | ||| |  |||| || || |  |||| |    
T  5863074 gatttgtccagtgaggatggatgagtggcaacactggtggaaagttctctagtgtgatggtaacggttttcggtacggtagcgatgagtcttcacggtag 5863173  T
Q  239 aacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtacc 338  Q
    |||||||  ||  |||| |||||||| | ||  ||||||||| ||| ||||  |||| ||||||||||| |||||| |||||| ||||  ||||| ||||    
T  5863174 aacgaaatttgcgtgcaagcacgttagcactcaaacgctcaagtcagtaatcgaactgagaaagagtgtgtagaaaatgttgtaaaaagtgaatcatacc 5863273  T
Q  339 ttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacgtgta 438  Q
    || ||| || ||||   |||| ||| ||||||| ||| |||   ||||| | |||||| ||   |||||||||||||| | |||||| ||||||||||||    
T  5863274 ttgagggtggagcaatgtcacccttgtataggcgcgcgttggaaataaccgcctccgggtttcacggcatgtgattagggacggttagaggacacgtgta 5863373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 233 - 439
Target Start/End: Complemental strand, 5925585 - 5925380
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaat 332  Q
    |||||||||||||||||||||||||||||||| | ||  |||| |||| ||| ||||| |||| ||| |||  || ||  |||||| |||||||  |       
T  5925585 cggtggaacgaaaggtgtctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgagagagaaagtctaagaagtgtcgtgaaaagtgttg 5925486  T
Q  333 cgtaccttaaggatgaagcaggttcactcttatataggcacgc-cttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggac 431  Q
     || |||| ||| ||||||| |||||| ||||| ||||| ||| | || ||||||| |||||||| ||||||||| ||||||  |||||||  | |||||    
T  5925485 tgttccttgagggtgaagcaagttcacccttatgtaggcgcgctcgtg-gcataaccgtctccgggttatgcggcgtgtgatctgaggcgg-aaaaggac 5925388  T
Q  432 acgtgtag 439  Q
    ||||||||    
T  5925387 acgtgtag 5925380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 314 - 416
Target Start/End: Complemental strand, 43172065 - 43171963
Alignment:
Q  314 agtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgat 413  Q
    |||||||||||||  ||||| ||| || ||| |||||||  ||||| ||||||||||| ||  ||||| ||||||| |||||| || |||||||| ||||    
T  43172065 agtgttgtgaaaagtgaatcatacattgagggtgaagcaacttcacccttatataggcgcggattgagaataactgcctccgggttttgcggcatttgat 43171966  T
Q  414 tag 416  Q
    |||    
T  43171965 tag 43171963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 232 - 345
Target Start/End: Complemental strand, 9868050 - 9867937
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||| ||||||||||  |||||| |||||| | || | |||||||| ||| ||||| |||| || |||||| | ||||||||||||| ||||  |||    
T  9868050 gcggtgggacgaaaggtgcatgcaggaacgttagcactctgacgctcaagtcagtaatggaactgaggaagagtttgtagaaagtgttgttaaaagtgaa 9867951  T
Q  332 tcgtaccttaagga 345  Q
    || |||||| ||||    
T  9867950 tcataccttgagga 9867937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 10287706 - 10287613
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    ||||||||| ||||||  |||||||||||||| | | ||||||||||| ||| ||||| | || ||||| ||||| ||  ||||||||||||||    
T  10287706 cggtggaaccaaaggttcctgcaggcacgttagcaccttaacgctcaagtcagtaatggatctgagaaaaagtgtgtaagaagtgttgtgaaaa 10287613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 794 - 850
Target Start/End: Original strand, 28861998 - 28862052
Alignment:
Q  794 gagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcat 850  Q
    ||||||||||||||||||||| | ||  |||||||||||||||||| ||||||||||    
T  28861998 gagtagtgatatttgaacaatcattt--gtgacaacttcttttttccctcttttcat 28862052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 818 - 855
Target Start/End: Original strand, 39875732 - 39875769
Alignment:
Q  818 ttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  39875732 ttatgtgacaatttcttttttctctcttttcattggtc 39875769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 929 - 961
Target Start/End: Complemental strand, 2790210 - 2790178
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttct 961  Q
    |||||||||||||||||||||||||||||||||    
T  2790210 ttgttacaaagtggttgtacaaatatcatttct 2790178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 312 - 416
Target Start/End: Complemental strand, 12265156 - 12265052
Alignment:
Q  312 aaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtg 411  Q
    |||||||||||||||  ||  |||||||| ||| | ||||| |||||| |||||||||||||||    ||||||||  ||||||| ||||||||| | ||    
T  12265156 aaagtgttgtgaaaagtgatgcgtaccttgagggtcaagcaagttcacccttatataggcacgctcgaagcataaccatctccgggttatgcggcgtatg 12265057  T
Q  412 attag 416  Q
    |||||    
T  12265056 attag 12265052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 404
Target Start/End: Original strand, 12644766 - 12644938
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgtt-gtgaaaatggaa 331  Q
    |||||||||||||||||  |||||||| |||| | ||   |||||||  ||| ||||| |||| ||||| ||||| | ||||||||| |||||||  |||    
T  12644766 cggtggaacgaaaggtgcatgcaggcaagttagcactccgacgctcaggtcagtaatggaactgagaaaaagtgtgtggaaagtgttggtgaaaagtgaa 12644865  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcg 404  Q
    | |||| || ||| ||||||| |||||| ||| || |||| ||| |||  |||||| |||| ||| |||||||    
T  12644866 ttgtacgttgagggtgaagcaagttcacccttgtagaggcgcgcgttggtcataaccgtcttcgggttatgcg 12644938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 929 - 961
Target Start/End: Complemental strand, 30941211 - 30941179
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttct 961  Q
    |||||||||||||||||||||||||||||||||    
T  30941211 ttgttacaaagtggttgtacaaatatcatttct 30941179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 234 - 326
Target Start/End: Original strand, 34854225 - 34854317
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    ||||||||||| ||||| ||||| ||||||| | || | |||||||| | | |||||||||| ||||||||||| ||  || |||||||||||    
T  34854225 ggtggaacgaacggtgtttgcagacacgttagcactctgacgctcaagttagtaatgaaactgagaaagagtgtgtaagaaatgttgtgaaaa 34854317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 854
Target Start/End: Original strand, 12102629 - 12102668
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  12102629 aacttttgtgacaacttattttttctctcttttcattggt 12102668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 352
Target Start/End: Original strand, 29373491 - 29373546
Alignment:
Q  297 agaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagca 352  Q
    ||||||||||| |||||| |||||||||||| ||||| |||||| ||| |||||||    
T  29373491 agaaagagtgtgtagaaaatgttgtgaaaattgaatcataccttgagggtgaagca 29373546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 854
Target Start/End: Complemental strand, 33684831 - 33684792
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  33684831 aacttttgtgacaacttcttttttctatcttttcattggt 33684792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Complemental strand, 5978724 - 5978690
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||| |||||||||||||||||||||    
T  5978724 tgtgacaacttctattttctctcttttcattggtc 5978690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 929 - 971
Target Start/End: Complemental strand, 31982090 - 31982049
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttcttcaaaaataa 971  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  31982090 ttgtcacaaagtggttgtacaaatatcatttc-tcaaaaataa 31982049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 813 - 855
Target Start/End: Original strand, 37351908 - 37351950
Alignment:
Q  813 ataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||| |||||||| |||||||||||||||||| |||||||    
T  37351908 ataacttttgtgacaatttcttttttctctctttttattggtc 37351950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 793 - 854
Target Start/End: Complemental strand, 43025978 - 43025919
Alignment:
Q  793 tgagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||   | ||||| ||| ||||||||||||||||||||||||| ||||    
T  43025978 tgagtagtgatatttgat--acaacttttgtaacaacttcttttttctctcttttcaatggt 43025919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 936 - 970
Target Start/End: Complemental strand, 43444661 - 43444627
Alignment:
Q  936 aaagtggttgtacaaatatcatttcttcaaaaata 970  Q
    |||||||||||||||||||||||||| ||||||||    
T  43444661 aaagtggttgtacaaatatcatttctccaaaaata 43444627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Complemental strand, 46651817 - 46651783
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||| |||||||||||||||||||||    
T  46651817 tgtgacaacttctattttctctcttttcattggtc 46651783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 821 - 854
Target Start/End: Original strand, 40717165 - 40717198
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||||||||||||||||||||||||| ||||||    
T  40717165 tgtgacaacttcttttttctctctttttattggt 40717198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 932 - 961
Target Start/End: Original strand, 42942420 - 42942449
Alignment:
Q  932 ttacaaagtggttgtacaaatatcatttct 961  Q
    ||||||||||||||||||||||||||||||    
T  42942420 ttacaaagtggttgtacaaatatcatttct 42942449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 821 - 854
Target Start/End: Original strand, 44894400 - 44894433
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||| |||||||||||||||||    
T  44894400 tgtgacaacttcttttatctctcttttcattggt 44894433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 3e-29; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 183 - 449
Target Start/End: Original strand, 3586294 - 3586560
Alignment:
Q  183 tgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaact 282  Q
    |||||||||||||||||||||| ||| | ||| ||| ||  || || ||||||||||| ||||||||  ||| |||||||||   ||   |||||||| |    
T  3586294 tgctccggtgtgacggtgaaggtttccggtacggcgacgttgagtctttgcggtggaatgaaaggtgcatgccggcacgttaggactccgacgctcaagt 3586393  T
Q  283 caataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagc 382  Q
    || ||||| |||| ||||| ||||  ||||||||||||||||||  ||||| |||||| ||| ||||||| |||||| ||||||||||| ||| |||  |    
T  3586394 cagtaatggaactgagaaaaagtgagtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatataggcgcgcgttggtc 3586493  T
Q  383 ataactgtctccggattatgcggcatgtgattagaggcggttataggacacgtgtaggatgaccctc 449  Q
    ||||| |  ||  | ||||||||| ||||| ||| | |||||| ||||||| |||||||||| ||||    
T  3586494 ataaccgcttcttggttatgcggcgtgtgaatagggacggttagaggacacatgtaggatgatcctc 3586560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 230 - 352
Target Start/End: Original strand, 12168950 - 12169073
Alignment:
Q  230 ttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgct-caactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatg 328  Q
    ||||||||||||||||||||||||||||||| ||||| ||  |||||| ||| ||| ||||| |||||||||||||||| ||||||||||||||||||      
T  12168950 ttgcggtggaacgaaaggtgtctgcaggcacattaacactccaacgcttcaagtcagtaatggaactaagaaagagtgtgtagaaagtgttgtgaaaagt 12169049  T
Q  329 gaatcgtaccttaaggatgaagca 352  Q
    ||||  |||||| ||| |||||||    
T  12169050 gaattataccttgagggtgaagca 12169073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 235 - 369
Target Start/End: Original strand, 36267481 - 36267615
Alignment:
Q  235 gtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcg 334  Q
    |||||| |||||||| ||||| ||| |||||| ||  ||||||||| ||| |||||||||| ||||||||||| ||||||| ||||||||||  |||||     
T  36267481 gtggaatgaaaggtgcctgcatgcatgttaacactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtagaaagggttgtgaaaagtgaatca 36267580  T
Q  335 taccttaaggatgaagcaggttcactcttatatag 369  Q
    |||||| ||| ||||||| |||||| |||||||||    
T  36267581 taccttgagggtgaagcaagttcacccttatatag 36267615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 232 - 370
Target Start/End: Complemental strand, 45258263 - 45258125
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||||||||||| ||||||||||||||||||| ||  || |||||| | | |||||||||||||||||| ||| | ||||||||||||||||  |||    
T  45258263 gcggtggaacgaaagatgtctgcaggcacgttaacactccaaagctcaagtaagtaatgaaactaagaaagaatgtgtcgaaagtgttgtgaaaagtgaa 45258164  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatatagg 370  Q
    || |||||| ||| |||||||   |||| ||||||||||    
T  45258163 tcataccttgagggtgaagcaaagtcacccttatatagg 45258125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 234 - 411
Target Start/End: Original strand, 15825136 - 15825313
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    |||||||||||| |||||||||||||||||| | |||| |||||||| ||  ||||| |||| ||||||||||| ||||||||||||||||||   |       
T  15825136 ggtggaacgaaatgtgtctgcaggcacgttagcactttgacgctcaagtcggtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtcatgt 15825235  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtg 411  Q
    ||||||| ||| ||||||| |||||| ||| ||||||| ||| |||  |||||| |||| ||  ||||||||| ||||    
T  15825236 gtaccttgagggtgaagcaagttcacccttgtataggcgcgcgttggtcataaccgtcttcgagttatgcggcgtgtg 15825313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 234 - 444
Target Start/End: Original strand, 45714977 - 45715187
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    ||||||||||||||||  ||||||||||||| | ||  ||||||||| ||| |||||||||| ||||||||||| || ||||||| |||||||| |||||    
T  45714977 ggtggaacgaaaggtgcatgcaggcacgttagcactccaacgctcaagtcagtaatgaaactgagaaagagtgtgtaaaaagtgtggtgaaaattgaatc 45715076  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagag-gcggttataggaca 432  Q
     |||||| | | ||||||    |||| ||| |||| ||||| | |||| ||||||||||| |   |||| ||| ||||||||||| || |||| ||||||    
T  45715077 ataccttgaaggtgaagctaagtcacccttgtataagcacg-cgtgagaataactgtctctgagatatgtggcgtgtgattagagagcagttagaggaca 45715175  T
Q  433 cgtgtaggatga 444  Q
    | ||||||||||    
T  45715176 catgtaggatga 45715187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 152 - 371
Target Start/End: Original strand, 24499695 - 24499908
Alignment:
Q  152 aggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtc 251  Q
    |||||| || ||||||||| ||||||||||||| || |||||||||||      ||||| ||  ||| ||| |||||||| |  ||| |||||||||| |    
T  24499695 aggatgaataagtggcaacggtggcggaaaatgttctggtgtgacggt------ttctgctatggcgtcgatgaatccttacaatgggacgaaaggtgcc 24499788  T
Q  252 tgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagc 351  Q
    |  ||| |||||| | ||  ||||||||| ||| ||||| || | ||||||||||| |||||| |||||||||||  ||||| |||||||||| ||||||    
T  24499789 tctaggaacgttagcactccaacgctcaagtcagtaatggaaatgagaaagagtgtgtagaaaatgttgtgaaaagtgaatcataccttaagggtgaagc 24499888  T
Q  352 aggttcactcttatataggc 371  Q
    | |||||| |||||| ||||    
T  24499889 aagttcacccttataaaggc 24499908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 234 - 371
Target Start/End: Complemental strand, 19919175 - 19919038
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    |||||||||||||||| ||||||| || |||   || ||||||  || ||||||||| || | ||||||||| | ||||||||||||||||||  |||||    
T  19919175 ggtggaacgaaaggtgcctgcaggaacattagaactctaacgccaaagtcaataatggaaatgagaaagagtatgtagaaagtgttgtgaaaagtgaatc 19919076  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggc 371  Q
     |||||| |||||||||||   ||||||||||||||||    
T  19919075 ataccttgaggatgaagcaatatcactcttatataggc 19919038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 232 - 416
Target Start/End: Original strand, 29710998 - 29711180
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    |||||||||| |||||||| |||| |||||||| | ||  ||||||||| ||| ||||| || |  ||||||| || ||  ||||||||||||||  ||     
T  29710998 gcggtggaacaaaaggtgtatgcatgcacgttagcactccaacgctcaagtcactaatggaatt--gaaagagagtgtacgaagtgttgtgaaaagtgat 29711095  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
      ||||||| ||| ||||||| |||||| ||||||||||| ||| ||| || |||| |||||||  |||||||||||||||||||    
T  29711096 gtgtaccttgagggtgaagcaagttcacccttatataggcgcgcattgggcttaaccgtctccgtgttatgcggcatgtgattag 29711180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 300 - 415
Target Start/End: Original strand, 18772296 - 18772411
Alignment:
Q  300 aagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggatt 399  Q
    |||||||| ||||||||||||||||||  ||   | ||||| ||| ||||||| |||||| ||||||||| ||| | |||  ||||||||||||||||||    
T  18772296 aagagtgtgtagaaagtgttgtgaaaagtgacgtgcaccttgagggtgaagcaagttcacccttatatagacacacgttggtcataactgtctccggatt 18772395  T
Q  400 atgcggcatgtgatta 415  Q
    ||||||| ||||||||    
T  18772396 atgcggcgtgtgatta 18772411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 232 - 326
Target Start/End: Complemental strand, 12127774 - 12127680
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    ||||||| |||||||||  |||||||||||||| | ||  ||||||||| ||| ||||||||||||||| | |||| ||||||||||||||||||    
T  12127774 gcggtgggacgaaaggtacctgcaggcacgttagcactccaacgctcaagtcagtaatgaaactaagaacgtgtgtgtagaaagtgttgtgaaaa 12127680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 233 - 340
Target Start/End: Original strand, 20120328 - 20120435
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaat 332  Q
    |||||||||||||||||||||||||||||||| | ||   || ||||| ||| |||||||||| ||||||||||| | ||||||| ||||| ||  ||||    
T  20120328 cggtggaacgaaaggtgtctgcaggcacgttagcactccgactctcaagtcagtaatgaaactgagaaagagtgtgtggaaagtggtgtgataagtgaat 20120427  T
Q  333 cgtacctt 340  Q
    | ||||||    
T  20120428 catacctt 20120435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 232 - 449
Target Start/End: Complemental strand, 10923276 - 10923060
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||||||||||||||| || |||||||||| | ||   || ||||| ||| | ||| |||| | ||||||||| ||||||||| ||||||||  |||    
T  10923276 gcggtggaacgaaaggtgtatgtaggcacgttatcactccgacactcaagtcagttatggaacttataaagagtgtgtagaaagtgctgtgaaaagtgaa 10923177  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggac 431  Q
      || |||| ||| ||||||| |||||| ||||||||  |  |  |||  |||||| |||| ||| ||||||||| ||||||||||| |||  | |||||    
T  10923176 gtgtgccttgagggtgaagcaagttcacccttatatacacgtgtgttggtcataacagtcttcggcttatgcggcgtgtgattagagacgg-aagaggac 10923078  T
Q  432 acgtgtaggatgaccctc 449  Q
    ||||||||| ||| ||||    
T  10923077 acgtgtagggtgatcctc 10923060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 794 - 855
Target Start/End: Original strand, 37085120 - 37085181
Alignment:
Q  794 gagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||||  |  ||||||||||||||||||||||||||||| |||||||    
T  37085120 gagtagtgatatttgaacaactatatatgtgacaacttcttttttctctctttttattggtc 37085181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 138 - 306
Target Start/End: Original strand, 30638449 - 30638617
Alignment:
Q  138 tgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtg 237  Q
    |||| |||| |||||| | |||||||||||||| || ||||| ||||| | ||||||||||| | |||||||| ||  | || |  || || | ||||||    
T  30638449 tgatatgtccagtgagaacggatgagtggcaacggttgcggataatgcactggtgtgacggtaatggcttctggtagggtggtgttgagtcatcgcggtg 30638548  T
Q  238 gaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtg 306  Q
    ||| ||||| ||||| ||| ||||||||| |||  |||||||  ||| ||||| |||||||||||||||    
T  30638549 gaaagaaagatgtctacagacacgttaacacttcgacgctcatgtcagtaatggaactaagaaagagtg 30638617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 42251840 - 42251880
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42251840 aacttatgtgacaacttcttttttctctcttttcattggtc 42251880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 818 - 855
Target Start/End: Complemental strand, 1889295 - 1889258
Alignment:
Q  818 ttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1889295 ttatgtgacaacttcttttttctctcttttcattggtc 1889258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 813 - 854
Target Start/End: Original strand, 6639390 - 6639431
Alignment:
Q  813 ataacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  6639390 ataacttatgtgacaacttcttttctctctcttttcattggt 6639431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 236 - 326
Target Start/End: Original strand, 18770296 - 18770388
Alignment:
Q  236 tggaacgaaaggtgtctgca--ggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    |||||||||||||| || ||  ||||||||| | || | |||||||| ||| |||||||| | ||||||||||| ||||||||||||||||||    
T  18770296 tggaacgaaaggtgcctacataggcacgttagcactctgacgctcaagtcagtaatgaaattgagaaagagtgtgtagaaagtgttgtgaaaa 18770388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 3091892 - 3091852
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  3091892 aacttttgtgacaacttcttttttctctcttttcattggtc 3091852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 23045312 - 23045272
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  23045312 aacttatgtgacaacttcttttttctctattttcattggtc 23045272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 31296763 - 31296803
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  31296763 aacttatgtgacaatttcttttttctctcttttcattggtc 31296803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 854
Target Start/End: Original strand, 11164296 - 11164335
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  11164296 aacttttgtgacaacttcttttttctctcttttcattggt 11164335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 854
Target Start/End: Complemental strand, 12600199 - 12600160
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  12600199 aacttttgtgacaacttcttttttctctcttttcattggt 12600160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 854
Target Start/End: Complemental strand, 13711212 - 13711173
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  13711212 aacttttgtgacaacttcttttttctctcttttcattggt 13711173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 812 - 855
Target Start/End: Original strand, 14140256 - 14140299
Alignment:
Q  812 aataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||| |||||||| ||||||||||||||||||||||||||    
T  14140256 aataacttttgtgacaatttcttttttctctcttttcattggtc 14140299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 818 - 853
Target Start/End: Complemental strand, 18917772 - 18917737
Alignment:
Q  818 ttatgtgacaacttcttttttctctcttttcattgg 853  Q
    ||||||||||||||||||||||||||||||||||||    
T  18917772 ttatgtgacaacttcttttttctctcttttcattgg 18917737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 854
Target Start/End: Complemental strand, 36133125 - 36133086
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  36133125 aacttttgtgacaacttcttttttctctcttttcattggt 36133086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 138 - 404
Target Start/End: Complemental strand, 15390790 - 15390524
Alignment:
Q  138 tgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtg 237  Q
    |||| ||||| ||||| | || ||||||||||| ||| | || |||||||  |||||||||| | |||||| |  || || |||| || || | ||| ||    
T  15390790 tgatctgtctggtgagaacggttgagtggcaacggtgccagagaatgctctagtgtgacggtaacggcttccggcacggcagcgatgagtcttcgcgatg 15390691  T
Q  238 gaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtac 337  Q
    ||||||||| || ||   ||||||||| | |||| |||||||| | | | ||| |||||| ||| ||||| ||  ||||||||||||||  ||   ||||    
T  15390690 gaacgaaagctgcctattggcacgttagcactttgacgctcaagtaagtgatggaactaataaacagtgtgtaagaagtgttgtgaaaagtgatgtgtac 15390591  T
Q  338 cttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcg 404  Q
    ||| ||| ||||||| |||||| ||||||||||| ||| | |  |||||| ||| |||| |||||||    
T  15390590 cttgagggtgaagcaagttcacccttatataggcgcgcgtaggccataaccgtccccgggttatgcg 15390524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 45714897 - 45714955
Alignment:
Q  133 gattttgatttgtctagtgaggatggatgagtggcaaccgtggcggaaaatgctccggt 191  Q
    |||| ||||||||| | |||||||||||||||||||||  ||||||||| |||||||||    
T  45714897 gattatgatttgtccaatgaggatggatgagtggcaacaatggcggaaagtgctccggt 45714955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 822 - 854
Target Start/End: Complemental strand, 12066053 - 12066021
Alignment:
Q  822 gtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||||||||||||||||||    
T  12066053 gtgacaacttcttttttctctcttttcattggt 12066021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 232 - 416
Target Start/End: Complemental strand, 19050546 - 19050362
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||||||||||||| | ||||| | ||||| | || | |||||||| ||| ||||  ||||||||||||| || ||  ||||||||||||||  ||     
T  19050546 gcggtggaacgaaaggtatttgcagacccgttagcactctgacgctcaagtcagtaatagaactaagaaagagagtgtaagaagtgttgtgaaaagtgat 19050447  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
      ||||| | ||  ||||| | |||||| |||||||||||  || |||  |||||||  |||||| ||||||||| | |||||||    
T  19050446 gtgtaccctgagagtgaagtaagttcacccttatataggcttgcgttggccataactaactccgggttatgcggcgtatgattag 19050362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 43650467 - 43650507
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||| |||||||||||||||||| |||||||    
T  43650467 aacttatgtgacaatttcttttttctctctttttattggtc 43650507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 929 - 959
Target Start/End: Complemental strand, 12065950 - 12065920
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcattt 959  Q
    |||||||||||||||||||||||||||||||    
T  12065950 ttgttacaaagtggttgtacaaatatcattt 12065920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 12168891 - 12168933
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggt 191  Q
    |||| |||||||||| |||||| ||||||||||||||||||||    
T  12168891 gtgaagatggatgagaggcaacagtggcggaaaatgctccggt 12168933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Complemental strand, 13104624 - 13104590
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||| |||||||||||||||||||||||    
T  13104624 tgtgacaacttattttttctctcttttcattggtc 13104590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Complemental strand, 22390297 - 22390263
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||| ||||||||||||||||||    
T  22390297 tgtgacaacttcttttctctctcttttcattggtc 22390263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 334 - 416
Target Start/End: Complemental strand, 24157315 - 24157233
Alignment:
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||||||| ||| ||||||| |||||| |||||||| || ||  |||  | ||||||||||||| |||||||| ||||||||||    
T  24157315 gtaccttgagggtgaagcaagttcacccttatataagcgcgtgttggccctaactgtctccgggttatgcggtatgtgattag 24157233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 240 - 350
Target Start/End: Complemental strand, 27846622 - 27846512
Alignment:
Q  240 acgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtacct 339  Q
    |||||| ||| |||||||||||||| | ||  |||| |||| ||| ||||| |||| ||||| ||| | |||||||||||||| |||  |||| ||||||    
T  27846622 acgaaaagtgcctgcaggcacgttagcactccaacgatcaagtcagtaatggaactgagaaacagtttgtagaaagtgttgtgtaaagtgaattgtacct 27846523  T
Q  340 taaggatgaag 350  Q
    | ||| |||||    
T  27846522 tgagggtgaag 27846512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Complemental strand, 32750143 - 32750109
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||| |||||||||||||||||||||||    
T  32750143 tgtgacaacttattttttctctcttttcattggtc 32750109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 825 - 855
Target Start/End: Original strand, 36376781 - 36376811
Alignment:
Q  825 acaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||||||||||||    
T  36376781 acaacttcttttttctctcttttcattggtc 36376811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 929 - 966
Target Start/End: Complemental strand, 36435714 - 36435677
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttcttcaaa 966  Q
    |||| |||||||||||||||||||||||||||| ||||    
T  36435714 ttgtcacaaagtggttgtacaaatatcatttctccaaa 36435677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 795 - 854
Target Start/End: Complemental strand, 40326295 - 40326239
Alignment:
Q  795 agtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||||||||||||||||||   |||||  |||||||||||||||| |||||| ||||||    
T  40326295 agtagtgatatttgaacaat---ttatgcaacaacttcttttttctgtctttttattggt 40326239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 157 - 396
Target Start/End: Original strand, 6203 - 6442
Alignment:
Q  157 ggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcag 256  Q
    |||||||||||||| ||| |||| ||||||| ||||||||||| | | |||  | ||| ||  ||  || ||  ||| ||||||| |||||||| |||||    
T  6203 ggatgagtggcaacggtgacggataatgctctggtgtgacggtaacgactttcggtacggcaacgttgagtctctgcagtggaacaaaaggtgtttgcag 6302  T
Q  257 gcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggtt 356  Q
    |||||||| | |||  | |||||| ||| ||||| |||| ||||| ||||| ||||||||||||||||||  || ||||||||| ||  ||||||| |||    
T  6303 gcacgttagcacttcgaagctcaagtcagtaatggaactgagaaatagtgtgtagaaagtgttgtgaaaagtgagtcgtaccttgagcgtgaagcaagtt 6402  T
Q  357 cactcttatataggcacgccttgagcataactgtctccgg 396  Q
    ||  ||||||||||| | | |||| |||||| ||||||||    
T  6403 catccttatataggcgcacgttgaacataaccgtctccgg 6442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 232 - 439
Target Start/End: Complemental strand, 95921 - 95714
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||| || ||||||  |||||||||||||| | ||| ||||||||| | | ||||| |||| ||||||||||  ||||||||||||||||||  |||    
T  95921 gcggtgggacaaaaggttcctgcaggcacgttaccacttcaacgctcaagttagtaatggaactgagaaagagtgcgtagaaagtgttgtgaaaagtgaa 95822  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggac 431  Q
    || |||||| ||| |||||||   |||| ||||||||||||||| ||  | ||| ||  |||||  || |||||| ||||||||| | |||||| |||||    
T  95821 tcataccttcagggtgaagcaacgtcacccttatataggcacgcgtttggaatatctacctccgagttttgcggcgtgtgattagggacggttagaggac 95722  T
Q  432 acgtgtag 439  Q
    || |||||    
T  95721 acatgtag 95714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 53; Significance: 7e-21; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 272 - 439
Target Start/End: Complemental strand, 68871 - 68706
Alignment:
Q  272 aacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggc 371  Q
    ||||||||| | | ||||| |||| |||||||||  |||||||||||||||||||  ||||| |||||| |||  |||||| | |||| |||||||||||    
T  68871 aacgctcaagttagtaatggaactgagaaagagt--atagaaagtgttgtgaaaagtgaatcataccttgagggagaagcaaggtcacccttatataggc 68774  T
Q  372 acgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacgtgtag 439  Q
    |||| ||||| ||||||| ||| || ||  |||||||||||||||    |||||||||||||| ||||    
T  68773 acgcgttgagaataactgcctctgggtttcgcggcatgtgattaggattggttataggacacgcgtag 68706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 794 - 854
Target Start/End: Original strand, 31502 - 31559
Alignment:
Q  794 gagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    |||||||||||||||||||||   || ||||||||||| ||||||||||||||||||||||    
T  31502 gagtagtgatatttgaacaat---ttttgtgacaactttttttttctctcttttcattggt 31559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 7e-21; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 232 - 416
Target Start/End: Complemental strand, 431427 - 431243
Alignment:
Q  232 gcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaa 331  Q
    ||||||||| |||||||| || ||| ||||||| | |||  |||||||| ||||||||| |||| ||||||||||  | ||||||| ||||||||  |||    
T  431427 gcggtggaaagaaaggtgcctacagacacgttagcacttcgacgctcaagtcaataatggaactgagaaagagtgcgtggaaagtgctgtgaaaagtgaa 431328  T
Q  332 tcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    | || |||| ||| ||||||| || ||| ||||||||||| ||  |||  ||||||||||| ||| |||||| || |||||||||    
T  431327 ttgtcccttgagggtgaagcatgtccacccttatataggcgcgtgttgctcataactgtctgcgggttatgcagcgtgtgattag 431243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 149 - 375
Target Start/End: Complemental strand, 9801277 - 9801052
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggt 248  Q
    |||||||||||||||  ||||| |||||||||||||||||| |||||| |  | | ||||   ||| | | |||| | || | || ||||||||||||||    
T  9801277 gtgaggatggatgagaagcaacagtggcggaaaatgctccgatgtgacagcaatgacttccagtacggtgacgaaaagtcttcgcagtggaacgaaaggt 9801178  T
Q  249 gtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatga 348  Q
    | ||||| |||||||| | ||  ||| ||||| ||| ||||  |||  ||||||||||| ||||||||||||||||||  ||||| |||||| ||| |||    
T  9801177 gcctgcaagcacgttagcactc-aacactcaagtcagtaatagaacagagaaagagtgtgtagaaagtgttgtgaaaagtgaatcataccttgagggtga 9801079  T
Q  349 agcaggttcactcttatataggcacgc 375  Q
    ||||   |||| |||||||||||||||    
T  9801078 agcaatgtcacccttatataggcacgc 9801052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 239 - 453
Target Start/End: Original strand, 20622393 - 20622608
Alignment:
Q  239 aacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtataga--aagtgttgtgaaaatggaatcgta 336  Q
    ||||||||||  ||||||||| |||||| |||| |||||||| ||| |||||| |   ||||| ||||| ||||  ||||| ||||||||  ||||| ||    
T  20622393 aacgaaaggttcctgcaggcatgttaacactttgacgctcaagtcagtaatgagatagagaaatagtgtgtagataaagtggtgtgaaaagtgaatcata 20622492  T
Q  337 ccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacgtg 436  Q
    |||| ||| ||||||| |||||| |||||||| ||| |  ||| ||||||| ||||  || ||||| | | |||||||||| ||| | | ||||||||||    
T  20622493 ccttgagggtgaagcaagttcacccttatatatgcatgtgttgggcataaccgtctttgggttatgtgacgtgtgattagaagcgataa-aggacacgtg 20622591  T
Q  437 taggatgaccctcacgc 453  Q
    |||| ||| ||||||||    
T  20622592 tagggtgatcctcacgc 20622608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 233 - 326
Target Start/End: Complemental strand, 21342397 - 21342304
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    |||||| ||||||||| | |||||||||||||||  |  ||||||||| ||| ||||| |||| | ||||||||||||||||||||||||||||    
T  21342397 cggtgggacgaaaggtatatgcaggcacgttaacagtacaacgctcaagtcagtaatggaactgataaagagtgtatagaaagtgttgtgaaaa 21342304  T

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Target: chr3; HSP #5
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 432
Target Start/End: Original strand, 16704447 - 16704582
Alignment:
Q  297 agaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccgg 396  Q
    |||||||| || ||||||||||||||||||  ||||| |||||| ||| ||||||| |||||| ||||||||||| ||| |||   ||||| | ||||||    
T  16704447 agaaagagagtgtagaaagtgttgtgaaaagtgaatcataccttgagggtgaagcaagttcacccttatataggcgcgcgttggtgataaccgcctccgg 16704546  T
Q  397 attatgcggcatgtgattagaggcggttataggaca 432  Q
    ||| |||    ||||||||||| |||||| ||||||    
T  16704547 attttgctatgtgtgattagagacggttagaggaca 16704582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 399
Target Start/End: Complemental strand, 28723845 - 28723718
Alignment:
Q  272 aacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggc 371  Q
    ||||||||| ||| ||||| |||||||||||||||| |||||| |||||||||||  |||||||| ||  ||| |||| ||   |||  |||||||||||    
T  28723845 aacgctcaagtcactaatggaactaagaaagagtgtgtagaaaatgttgtgaaaagtgaatcgtatctggagggtgaaacaatgtcatccttatataggc 28723746  T
Q  372 acgccttgagcataactgtctccggatt 399  Q
     ||| ||||| ||||||||||| |||||    
T  28723745 gcgctttgagaataactgtctctggatt 28723718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 157 - 416
Target Start/End: Original strand, 1770730 - 1770990
Alignment:
Q  157 ggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcag 256  Q
    |||||||||||||| |||| | | ||||||   |||||||||||| || || ||| || | |||   || || ||||||||||| ||||||||||||||     
T  1770730 ggatgagtggcaacggtggtgaataatgctttagtgtgacggtgatggtttttgaaacggaggcattgagtctttgcggtggaaggaaaggtgtctgcaa 1770829  T
Q  257 gcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtac--cttaaggatgaagcagg 354  Q
    ||| ||||   ||   |||||||| | | ||||| |||| || |||||||| ||||||||||||||||||  || || | |  ||| ||||||||||| |    
T  1770830 gcatgttagtactccgacgctcaagttagtaatggaactgaggaagagtgtgtagaaagtgttgtgaaaagtga-tcatgcgccttgaggatgaagcaag 1770928  T
Q  355 ttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||| | ||||||||||  ||| ||| ||||||| ||||||| |||||||||| | |||||||    
T  1770929 ttcgcccttatataggtgcgcgttgtgcataaccgtctccgaattatgcggcgtatgattag 1770990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 272 - 433
Target Start/End: Original strand, 30606948 - 30607109
Alignment:
Q  272 aacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggc 371  Q
    ||||||||| ||| ||||| || | ||||||||||  ||||||||||||||||||  ||||  |||||| ||| ||||| | |  ||| |||||||||||    
T  30606948 aacgctcaagtcagtaatggaattgagaaagagtgagtagaaagtgttgtgaaaagtgaattataccttgagggtgaagtaaggccacccttatataggc 30607047  T
Q  372 acgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacac 433  Q
     ||| || || |||||||||||||| ||  || || ||||||||| | |||||| |||||||    
T  30607048 gcgcgttaagaataactgtctccgggtttcgccgcgtgtgattagggacggttagaggacac 30607109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 334 - 449
Target Start/End: Original strand, 25496020 - 25496134
Alignment:
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacac 433  Q
    ||||||||| | ||||||| |||||| ||||||||||| | | |||| |||||| |||||||| ||||||||| |||||||||   ||| | ||||||||    
T  25496020 gtaccttaaaggtgaagcaagttcacccttatataggcgcacgttgatcataaccgtctccgggttatgcggcgtgtgattaggaacgg-tgtaggacac 25496118  T
Q  434 gtgtaggatgaccctc 449  Q
    |||| |||||| ||||    
T  25496119 gtgttggatgatcctc 25496134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 416
Target Start/End: Original strand, 12108501 - 12108583
Alignment:
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||||||| ||| ||||||| |||||| ||||||||||||||| |||  |||||| | |||||| ||||||||| |||||||||    
T  12108501 gtaccttgagggtgaagcaagttcacccttatataggcacgcgttggtcataacggcctccgggttatgcggcttgtgattag 12108583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 416
Target Start/End: Original strand, 12516167 - 12516349
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    |||| ||||||||||| |||||| ||||||| | ||   |||||||| | | ||||| |||| ||||||| ||| ||  ||||||||||||||  ||       
T  12516167 ggtgaaacgaaaggtgcctgcagacacgttagcactccgacgctcaagttagtaatggaactgagaaagattgtgtaataagtgttgtgaaaagtgatat 12516266  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||||||| ||| ||||||| ||||||  |||||||||   ||||||  |||||| |||||||  ||||||| |||||||||||    
T  12516267 gtaccttgagggtgaagcaagttcacctttatataggtgtgccttggccataaccgtctccgccttatgcgacatgtgattag 12516349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 813 - 855
Target Start/End: Original strand, 39604164 - 39604206
Alignment:
Q  813 ataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  39604164 ataacttatttgacaacttcttttttctctcttttcattggtc 39604206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 11173601 - 11173561
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  11173601 aacttttgtgacaacttcttttttctctcttttcattggtc 11173561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 815 - 855
Target Start/End: Complemental strand, 35272178 - 35272138
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  35272178 aacttatgtgacaacttcttttttctctctttttattggtc 35272138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 854
Target Start/End: Complemental strand, 5188387 - 5188348
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  5188387 aacttttgtgacaacttcttttttctctcttttcattggt 5188348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 273 - 340
Target Start/End: Complemental strand, 17143819 - 17143752
Alignment:
Q  273 acgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtacctt 340  Q
    |||||||| ||| ||||| |||| ||||||||||| ||||||||||||||||||  ||||| ||||||    
T  17143819 acgctcaagtcagtaatggaactgagaaagagtgtgtagaaagtgttgtgaaaagtgaatcatacctt 17143752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 818 - 853
Target Start/End: Original strand, 24551150 - 24551185
Alignment:
Q  818 ttatgtgacaacttcttttttctctcttttcattgg 853  Q
    ||||||||||||||||||||||||||||||||||||    
T  24551150 ttatgtgacaacttcttttttctctcttttcattgg 24551185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 815 - 854
Target Start/End: Complemental strand, 29706054 - 29706015
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  29706054 aacttttgtgacaacttcttttttctctcttttcattggt 29706015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 234 - 371
Target Start/End: Complemental strand, 14860208 - 14860071
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    ||||||||||||||||  ||||||||| ||| | || | |  ||||||||| ||||| |||| ||||| ||| | ||  ||||||||||||||  ||       
T  14860208 ggtggaacgaaaggtgcttgcaggcacattagcactctgattctcaactcagtaatggaactgagaaacagtttgtaagaagtgttgtgaaaagtgatgt 14860109  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggc 371  Q
    ||||||| ||| ||||||| |||||| |||||||||||    
T  14860108 gtaccttgagggtgaagcaagttcacccttatataggc 14860071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 311 - 418
Target Start/End: Original strand, 13933003 - 13933113
Alignment:
Q  311 gaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcag---gttcactcttatataggcacgccttgagcataactgtctccggattatgcggca 407  Q
    |||| |||||||||||  ||||| ||||||| || ||||| ||   |||||||||||||||| | ||| || | ||||||  |||| ||||||||||||     
T  13933003 gaaaatgttgtgaaaagtgaatcataccttaggggtgaagaagcaagttcactcttatatagacgcgcgttcaacataaccatctctggattatgcggcg 13933102  T
Q  408 tgtgattagag 418  Q
    |||||||||||    
T  13933103 tgtgattagag 13933113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 20380809 - 20380849
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  20380809 aacttttgtgacaacttcttttttctcacttttcattggtc 20380849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 929 - 961
Target Start/End: Original strand, 34271528 - 34271560
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttct 961  Q
    |||||||||||||||||||||||||||||||||    
T  34271528 ttgttacaaagtggttgtacaaatatcatttct 34271560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 37215151 - 37215191
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  37215151 aacttttgtgacaacttattttttctctcttttcattggtc 37215191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 823 - 855
Target Start/End: Complemental strand, 46473271 - 46473239
Alignment:
Q  823 tgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||||||||||||||||||    
T  46473271 tgacaacttcttttttctctcttttcattggtc 46473239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 823 - 854
Target Start/End: Original strand, 32457683 - 32457714
Alignment:
Q  823 tgacaacttcttttttctctcttttcattggt 854  Q
    ||||||||||||||||||||||||||||||||    
T  32457683 tgacaacttcttttttctctcttttcattggt 32457714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 815 - 854
Target Start/End: Original strand, 37302994 - 37303033
Alignment:
Q  815 aacttatgtgacaacttcttttttctctcttttcattggt 854  Q
    ||||| |||||||| |||||||||||||||||||||||||    
T  37302994 aacttttgtgacaatttcttttttctctcttttcattggt 37303033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 272 - 326
Target Start/End: Complemental strand, 13085144 - 13085090
Alignment:
Q  272 aacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    ||||||||| |||||||||||||| ||||||| | | |||||||| |||||||||    
T  13085144 aacgctcaagtcaataatgaaactgagaaagaatatgtagaaagtattgtgaaaa 13085090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 821 - 855
Target Start/End: Original strand, 19418086 - 19418120
Alignment:
Q  821 tgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||| ||||||||||||||||||    
T  19418086 tgtgacaacttcttttctctctcttttcattggtc 19418120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 929 - 971
Target Start/End: Original strand, 20380927 - 20380969
Alignment:
Q  929 ttgttacaaagtggttgtacaaatatcatttcttcaaaaataa 971  Q
    |||| ||||||||||||||||||||||||||||  ||||||||    
T  20380927 ttgtcacaaagtggttgtacaaatatcatttctcaaaaaataa 20380969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 825 - 854
Target Start/End: Complemental strand, 6126595 - 6126566
Alignment:
Q  825 acaacttcttttttctctcttttcattggt 854  Q
    ||||||||||||||||||||||||||||||    
T  6126595 acaacttcttttttctctcttttcattggt 6126566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 198
Target Start/End: Complemental strand, 17143943 - 17143894
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacgg 198  Q
    ||||| ||||||||||| |||| |||||||| ||| ||||||||||||||    
T  17143943 gtgagaatggatgagtgtcaacggtggcggataattctccggtgtgacgg 17143894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 815 - 855
Target Start/End: Original strand, 41877530 - 41877571
Alignment:
Q  815 aacttatgtgacaacttcttttt-tctctcttttcattggtc 855  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  41877530 aacttatgtgacaatttctttttctctctcttttcattggtc 41877571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 6e-18; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 160 - 371
Target Start/End: Original strand, 379624 - 379835
Alignment:
Q  160 tgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggca 259  Q
    ||||||||||| ||||| || |||||||||||||||| || |  ||||| | ||| ||| ||| || || | ||||||||||||||||||  |  |||||    
T  379624 tgagtggcaacagtggcagagaatgctccggtgtgactgtaacagcttccggtacggcgacgatgagtcttcgcggtggaacgaaaggtgcatctaggca 379723  T
Q  260 cgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcac 359  Q
    ||||| | |||| || || || ||| ||||| |||| ||||||||||| ||  ||||||||||||||  ||   ||||||| ||| ||||||| ||||||    
T  379724 cgttagcactttgacactgaagtcagtaatggaactgagaaagagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaagttcac 379823  T
Q  360 tcttatataggc 371  Q
     | |||||||||    
T  379824 ccgtatataggc 379835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 286 - 371
Target Start/End: Complemental strand, 121068 - 120983
Alignment:
Q  286 taatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggc 371  Q
    ||||| |||| ||||||||||| || |||||||||||||||  ||   ||||||| ||| |||||||  ||||| |||||||||||    
T  121068 taatggaactgagaaagagtgtgtataaagtgttgtgaaaagtgatgtgtaccttgagggtgaagcaaattcacccttatataggc 120983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 238 - 416
Target Start/End: Original strand, 215258 - 215436
Alignment:
Q  238 gaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtac 337  Q
    ||||||||| ||||||||||||||||| |  |  ||||||||| ||| |||||||||| | | ||||||| ||  ||||||||||||||  |    ||||    
T  215258 gaacgaaagttgtctgcaggcacgttagcaatccaacgctcaagtcagtaatgaaactgaaagagagtgtgtaagaagtgttgtgaaaagtgttgtgtac 215357  T
Q  338 cttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    ||| ||| ||||||| |||||  ||||||||| |  |  |||| ||||||||||||||| ||||||||| |||||||||    
T  215358 cttgagggtgaagcaagttcatccttatatagccgtgtgttgatcataactgtctccgggttatgcggcgtgtgattag 215436  T

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Target: scaffold0205 (Bit Score: 45; Significance: 4e-16; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 216 - 392
Target Start/End: Complemental strand, 11042 - 10866
Alignment:
Q  216 gcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaag 315  Q
    ||||||| |||||  ||||||||||| |||||||| ||||||||||||| | ||  ||||||||| ||||||||| |||| | | ||||||| ||  |||    
T  11042 gcggcgatgaatctctgcggtggaacaaaaggtgtatgcaggcacgttagcactccaacgctcaagtcaataatggaactgaaagagagtgtgtaagaag 10943  T
Q  316 tgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtct 392  Q
    |||||||||||  ||   ||||||| ||| |||| || ||||||  |||||||| | ||| |||| |||||| ||||    
T  10942 tgttgtgaaaagtgatgtgtaccttgagggtgaaacaagttcacctttatatagacgcgcattgatcataaccgtct 10866  T

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Target: scaffold0205; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 235 - 370
Target Start/End: Original strand, 22869 - 23004
Alignment:
Q  235 gtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcg 334  Q
    |||| |||||||||| |||| ||||||||| | || | |||||||| ||| ||||| |||| |||||  |||| ||  ||||||||||||||  ||   |    
T  22869 gtgggacgaaaggtgcctgcgggcacgttagcactctgacgctcaagtcagtaatggaactgagaaatcgtgtgtaagaagtgttgtgaaaagtgacgtg 22968  T
Q  335 taccttaaggatgaagcaggttcactcttatatagg 370  Q
    |||||| ||| ||||||| |||||| ||||| ||||    
T  22969 taccttgagggtgaagcaagttcacccttatgtagg 23004  T

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Target: scaffold0360 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 275 - 370
Target Start/End: Original strand, 13945 - 14040
Alignment:
Q  275 gctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatatagg 370  Q
    |||||| ||| |||||||||| ||||||||||| ||||||||||||||| ||  ||||| |||||| ||| ||||||| | |||| ||||||||||    
T  13945 gctcaagtcagtaatgaaactgagaaagagtgtgtagaaagtgttgtgagaagtgaatcataccttgagggtgaagcaagatcacccttatatagg 14040  T

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Target: scaffold0013 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 373
Target Start/End: Complemental strand, 4533 - 4394
Alignment:
Q  234 ggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatc 333  Q
    |||||||||||||||||||||| |||||||| | ||  ||||||||| ||| |||||||||| | | |||| || ||  ||||||| ||||||  ||       
T  4533 ggtggaacgaaaggtgtctgcaagcacgttagcactccaacgctcaagtcactaatgaaactgaaagagagagtgtaagaagtgttatgaaaaatgatgt 4434  T
Q  334 gtaccttaaggatgaagcaggttcactcttatataggcac 373  Q
    ||||||| ||| ||||||| |||||| |||||||||||||    
T  4433 gtaccttgagggtgaagcaagttcacccttatataggcac 4394  T

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Target: scaffold0505 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 233 - 326
Target Start/End: Original strand, 7866 - 7959
Alignment:
Q  233 cggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    |||||||| ||||||||  || |||||||||| | || |||||||||| ||| ||||| || | ||||||||||| ||||||||||||||||||    
T  7866 cggtggaaggaaaggtgcatgtaggcacgttagcactctaacgctcaaatcagtaatgcaattgagaaagagtgtgtagaaagtgttgtgaaaa 7959  T

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Target: scaffold0294 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 313 - 169
Alignment:
Q  273 acgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa-tg-gaatcgtaccttaaggatgaagcaggttcactcttatatagg 370  Q
    |||||||| ||| ||||| |||| ||||||||||| ||  |||||||||||||| || |||| ||||||| ||| ||||||| |||||| ||||| ||||    
T  313 acgctcaagtcagtaatggaactgagaaagagtgtgtaagaagtgttgtgaaaagtgagaat-gtaccttgagggtgaagcaagttcacccttatctagg 215  T
Q  371 cacgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    | ||| |||  ||||||||||||||| |||||| |  |||||||||    
T  214 cgcgcgttggtcataactgtctccgggttatgcagtgtgtgattag 169  T

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Target: scaffold0174 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 326
Target Start/End: Complemental strand, 29470 - 29295
Alignment:
Q  149 gtgaggatggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggt 248  Q
    ||||| ||||||| |||||||| || ||| ||| ||||||||| |||||||||  | ||||| |||  ||  || || || | |||||||||||||||||    
T  29470 gtgagaatggatgcgtggcaacggttgcgcaaagtgctccggtatgacggtgacagtttctggtacgacgatgatgagtcttcgcggtggaacgaaaggt 29371  T
Q  249 gtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    |  || || || |||| | ||  ||||||||| ||| |||||||| |||| |||||||||  ||||||||||||||||    
T  29370 gcatggagtcatgttagcactccaacgctcaagtcagtaatgaaaataaggaagagtgta--gaaagtgttgtgaaaa 29295  T

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Target: scaffold0076 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 794 - 855
Target Start/End: Complemental strand, 11362 - 11303
Alignment:
Q  794 gagtagtgatatttgaacaataacttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    |||||||||||||||||  | ||||| ||||||||| |||||||||||||||||||||||||    
T  11362 gagtagtgatatttgaa--acaacttttgtgacaacctcttttttctctcttttcattggtc 11303  T

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Target: scaffold0103 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 238 - 415
Target Start/End: Original strand, 40782 - 40959
Alignment:
Q  238 gaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtac 337  Q
    |||||||||| |  ||||||||||||| | ||  ||||||||| ||| | ||| |||| | | |||| || ||| ||||||| ||||||  ||   ||||    
T  40782 gaacgaaaggcgcatgcaggcacgttagcactccaacgctcaagtcagtgatggaactgaaagagagagtgtaggaagtgttatgaaaagtgatgtgtac 40881  T
Q  338 cttaaggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgatta 415  Q
    ||| ||| ||||||| |||||| ||| |||||||  ||  ||  |||||| |||||||| ||||||||||||||||||    
T  40882 cttgagggtgaagcaagttcacccttttataggcgtgcgctggtcataaccgtctccgggttatgcggcatgtgatta 40959  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 818 - 855
Target Start/End: Original strand, 219587 - 219624
Alignment:
Q  818 ttatgtgacaacttcttttttctctcttttcattggtc 855  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  219587 ttatgtgacaacttcttttctctctcttttcattggtc 219624  T

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Target: scaffold0543 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 342 - 422
Target Start/End: Complemental strand, 4949 - 4869
Alignment:
Q  342 aggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcgg 422  Q
    |||||||||||  ||||||||||||||||  ||| |   |||||| ||||||||  |||||||||||||||||||| ||||    
T  4949 aggatgaagcaaattcactcttatataggttcgcttgtggcataattgtctccgatttatgcggcatgtgattagaagcgg 4869  T

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Target: scaffold0492 (Bit Score: 33; Significance: 0.000000006; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 342 - 422
Target Start/End: Complemental strand, 6495 - 6415
Alignment:
Q  342 aggatgaagcaggttcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcgg 422  Q
    |||||||||||  ||||||||||||||||  ||| |   |||||| ||||||||  |||||||||||||||||||| ||||    
T  6495 aggatgaagcaaattcactcttatataggttcgcttgtggcataattgtctccgatttatgcggcatgtgattagaagcgg 6415  T

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Target: scaffold0380 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 273 - 416
Target Start/End: Complemental strand, 6930 - 6787
Alignment:
Q  273 acgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatggaatcgtaccttaaggatgaagcaggttcactcttatataggca 372  Q
    |||||||| ||| || ||||||| |||| |||||| ||  ||||||||||||||  ||   ||||||| ||| |||| || |||||| ||| |||||||     
T  6930 acgctcaagtcagtattgaaactgagaacgagtgtgtaagaagtgttgtgaaaagtgatgtgtaccttgagggtgaaacaagttcacccttgtataggcg 6831  T
Q  373 cgccttgagcataactgtctccggattatgcggcatgtgattag 416  Q
    | | |||  |||||| |||||| | ||||||||| |||||||||    
T  6830 cacgttggccataaccgtctccaggttatgcggcgtgtgattag 6787  T

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Target: scaffold0464 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 326
Target Start/End: Original strand, 11454 - 11587
Alignment:
Q  190 gtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcaggcacgttaacgctttaacgctcaactcaataat 289  Q
    |||||||||| ||||||||||  || |||||||||| || |   ||||||||||| |||| || ||  || |||| | ||  |||||||| |||| ||||    
T  11454 gtgtgacggtaaaggcttctggcacggcggcgaagagtcttcaaggtggaacgaatggtgcctacaaccatgttagcactccaacgctcacctcattaat 11553  T
Q  290 gaaactaagaaagagtgtatagaaagtgttgtgaaaa 326  Q
    | |||| |||||||||||||   ||||||||||||||    
T  11554 ggaactgagaaagagtgtat---aagtgttgtgaaaa 11587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 31; Significance: 0.00000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 438
Target Start/End: Original strand, 35158 - 35440
Alignment:
Q  157 ggatgagtggcaaccgtggcggaaaatgctccggtgtgacggtgaaggcttctgatacagcggcgaagaatccttgcggtggaacgaaaggtgtctgcag 256  Q
    ||||||| |||||| ||||  || || |||||||||||| ||| | |||||| | ||| ||||||  || || | |  ||| ||||||| |||  |||||    
T  35158 ggatgagaggcaacagtggtagataaagctccggtgtgatggtaacggcttccggtacggcggcgttgagtcttcgtagtgcaacgaaatgtgcttgcag 35257  T
Q  257 gcacgttaacgctttaacgctcaactcaataatgaaactaagaaagagtgtatagaaagtgttgtgaaaatg-gaatcgtaccttaaggatgaagcaggt 355  Q
    |||||||| | || | || ||||| ||| ||| | |||| ||||||||||| | |||||||||||||||| | ||||| | | || |||  ||||| | |    
T  35258 gcacgttagcactctgacactcaagtcagtaacggaactgagaaagagtgtgtggaaagtgttgtgaaaaagtgaatcatcctttgagggggaagcggct 35357  T
Q  356 tcactcttatataggcacgccttgagcataactgtctccggattatgcggcatgtgattagaggcggttataggacacgtgta 438  Q
    | || ||||||||||||| | ||| ||||||  |||||||| | ||  | | ||||| ||| | |||||| ||||||||||||    
T  35358 ttacccttatataggcacacgttgggcataatcgtctccggctgatctgacctgtgaatagggacggttagaggacacgtgta 35440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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