View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4469-Insertion-3 (Length: 664)

Name: NF4469-Insertion-3
Description: NF4469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4469-Insertion-3
NF4469-Insertion-3
[»] chr4 (1 HSPs)
chr4 (7-664)||(26782856-26783513)


Alignment Details
Target: chr4 (Bit Score: 650; Significance: 0; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 650; E-Value: 0
Query Start/End: Original strand, 7 - 664
Target Start/End: Original strand, 26782856 - 26783513
Alignment:
Q  7 aactagcttaagtatcaaacagtcccctaaaaccaatgatgaccctgcctcatcgtatcatgttctttttacactgtcaccagccatggaaacaaatcct 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26782856 aactagcttaagtatcaaacagtcccctaaaaccaatgatgaccctgcctcatcgtatcatgttctttttacactgtcaccagccatggaaacaaatcct 26782955  T
Q  107 tcactggcaagagtagcaactgcactccttagctgcattaaacatgaaatagctcattagttcacttatcctcggggatggagcaaaagcatatacaccg 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  26782956 tcactggcaagagtagcaactgcactccttagctgcattaaacatgaaatagctcattagttcacttatcctcggggatggagcaaaagcatatacactg 26783055  T
Q  207 gtaaaataatttcaaaggaaagggcttacatcattaagatgaatttcgctgccagggctctgattcttcaactcctccaatatctgcgtgaccgtgttaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26783056 gtaaaataatttcaaaggaaagggcttacatcattaagatgaatttcgctgccagggctctgattcttcaactcctccaatatctgcgtgatcgtgttaa 26783155  T
Q  307 attatattagatcattgtctcaaactgaacataatctatactgaatggttttagaaagaatggtaatacctctaataatcgcatggaacgtcccccaatt 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26783156 attatattagatcattgtctcaaactgaacataatctatactgaatggttttagaaagaatggtaatacctctaataatcgcatggaacgtcccccaatt 26783255  T
Q  407 tgcatcttctccatgatcatgttgcgggtgtcttgaatcaaactttctcgcctcatcctttcgcttgccgaaacaccagtagttataagatccatgtcaa 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26783256 tgcatcttctccatgatcatgttgcgggtgtcttgaatcaaactttctcgcctcatcctttcgcttgccgaaacaccagtagttataagatccatgtcaa 26783355  T
Q  507 tagttcctgtgaagataaaaggattcagtctgatatatagttttatttggtggaatacaatagagtataggggcttgtttggataactaccagttctggt 606  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26783356 tagttcctgtgaagataaaaggattcagtctgatatatagttttatttggtggaatacaatagagtataggggcttgtttggataactaccagttctggt 26783455  T
Q  607 atccattgcagattgctgcattgcaacttccagaagccgaaatgcctccaccacgtca 664  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26783456 atccattgcagattgctgcattgcaacttccagaagccgaaatgcctccaccacgtca 26783513  T

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