View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4470_high_24 (Length: 204)
Name: NF4470_high_24
Description: NF4470
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4470_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 46905514 - 46905342
Alignment:
| Q |
14 |
ataattctaaattaaccatgatcttaaatgtgatagtgtgataattaacttaatctattaccaataataattcaaaaataaataaattactattaccaat |
113 |
Q |
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| T |
46905514 |
ataattccaaattaaccatgatcttaaatgtgatagtgtgataattaacttaatctattaccaataataattcaaaaataaataaattactattaccaat |
46905415 |
T |
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| Q |
114 |
tcaacatttttattttaaggaaattcaacaatgttattcgtgttaagatcatatccatattaaaggaacgtac |
186 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
46905414 |
tcaacatttttattttaaggaaattcaacaatgttattcgtgttaagatcatatccatattaaagcaacgtac |
46905342 |
T |
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