View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4471-Insertion-2 (Length: 782)

Name: NF4471-Insertion-2
Description: NF4471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4471-Insertion-2
NF4471-Insertion-2
[»] chr3 (48 HSPs)
chr3 (8-782)||(268965-269725)
chr3 (169-267)||(4050114-4050212)
chr3 (169-267)||(4055248-4055346)
chr3 (169-267)||(5481288-5481386)
chr3 (169-267)||(6857855-6857953)
chr3 (165-267)||(10584654-10584756)
chr3 (169-267)||(10672738-10672836)
chr3 (169-267)||(10677851-10677949)
chr3 (170-267)||(1302045-1302142)
chr3 (170-267)||(6852753-6852850)
chr3 (170-267)||(8465056-8465153)
chr3 (169-267)||(8458618-8458716)
chr3 (169-267)||(10591095-10591193)
chr3 (169-267)||(31081307-31081405)
chr3 (170-267)||(33702400-33702497)
chr3 (170-265)||(31076201-31076296)
chr3 (170-265)||(49784854-49784949)
chr3 (172-263)||(20891459-20891550)
chr3 (170-267)||(5457817-5457909)
chr3 (389-479)||(15674837-15674924)
chr3 (169-226)||(29827829-29827886)
chr3 (169-221)||(18023913-18023965)
chr3 (492-559)||(23954217-23954284)
chr3 (510-575)||(6579189-6579254)
chr3 (492-556)||(21253657-21253721)
chr3 (493-544)||(17042425-17042476)
chr3 (492-545)||(18548083-18548136)
chr3 (492-545)||(24195958-24196011)
chr3 (510-550)||(7478803-7478843)
chr3 (411-489)||(11656372-11656452)
chr3 (172-224)||(18023324-18023376)
chr3 (492-550)||(13918265-13918324)
chr3 (492-543)||(18034570-18034621)
chr3 (492-559)||(19634315-19634382)
chr3 (492-545)||(1918917-1918970)
chr3 (492-545)||(3551910-3551963)
chr3 (510-551)||(13914243-13914284)
chr3 (492-545)||(17135818-17135870)
chr3 (492-545)||(18063879-18063932)
chr3 (492-545)||(18483045-18483098)
chr3 (492-550)||(286563-286621)
chr3 (272-366)||(3554566-3554659)
chr3 (510-580)||(7495572-7495641)
chr3 (213-263)||(18023978-18024028)
chr3 (418-490)||(20747891-20747965)
chr3 (170-263)||(3187246-3187339)
chr3 (492-545)||(13791111-13791164)
chr3 (492-545)||(44452918-44452970)
[»] chr7 (44 HSPs)
chr7 (168-267)||(12857095-12857194)
chr7 (169-267)||(26051327-26051425)
chr7 (169-267)||(26056440-26056538)
chr7 (169-267)||(26060686-26060784)
chr7 (169-267)||(26065799-26065897)
chr7 (169-267)||(12851982-12852080)
chr7 (417-569)||(21260787-21260943)
chr7 (405-528)||(10038418-10038543)
chr7 (389-551)||(7586196-7586357)
chr7 (389-551)||(23082440-23082602)
chr7 (204-267)||(14610635-14610698)
chr7 (389-545)||(23579624-23579782)
chr7 (169-226)||(2248852-2248909)
chr7 (389-575)||(23960359-23960545)
chr7 (389-479)||(24902436-24902524)
chr7 (170-224)||(4181276-4181330)
chr7 (273-375)||(24901945-24902047)
chr7 (523-580)||(10251852-10251909)
chr7 (389-580)||(6045648-6045841)
chr7 (494-575)||(19295192-19295271)
chr7 (492-545)||(645569-645622)
chr7 (492-545)||(4459174-4459227)
chr7 (510-551)||(9567355-9567396)
chr7 (510-575)||(10661316-10661381)
chr7 (508-580)||(14927099-14927171)
chr7 (508-580)||(15350565-15350637)
chr7 (494-545)||(11588900-11588951)
chr7 (492-559)||(14165600-14165667)
chr7 (510-568)||(42636672-42636730)
chr7 (510-551)||(4794250-4794291)
chr7 (402-580)||(26132563-26132737)
chr7 (169-226)||(37459702-37459759)
chr7 (492-548)||(24049875-24049931)
chr7 (295-346)||(11560757-11560808)
chr7 (463-545)||(15506670-15506753)
chr7 (298-329)||(23385772-23385803)
chr7 (270-344)||(21260348-21260422)
chr7 (297-335)||(30225951-30225989)
chr7 (270-323)||(4548019-4548072)
chr7 (492-545)||(11521085-11521138)
chr7 (333-374)||(14687263-14687304)
chr7 (270-374)||(19352965-19353067)
chr7 (271-320)||(23580226-23580274)
chr7 (170-215)||(35352121-35352166)
[»] chr8 (22 HSPs)
chr8 (169-267)||(14318415-14318513)
chr8 (169-267)||(26986789-26986887)
chr8 (169-267)||(34108537-34108635)
chr8 (170-267)||(26981676-26981773)
chr8 (170-267)||(18493978-18494075)
chr8 (168-267)||(14314710-14314809)
chr8 (389-580)||(20254512-20254703)
chr8 (589-664)||(18552109-18552185)
chr8 (170-251)||(43956651-43956732)
chr8 (271-374)||(24384395-24384496)
chr8 (170-217)||(10340698-10340745)
chr8 (206-265)||(10340754-10340813)
chr8 (173-217)||(18608435-18608479)
chr8 (492-543)||(12814270-12814321)
chr8 (492-546)||(22485567-22485621)
chr8 (272-374)||(1562589-1562687)
chr8 (510-575)||(9996951-9997016)
chr8 (170-226)||(1782181-1782237)
chr8 (389-448)||(23864290-23864345)
chr8 (492-550)||(25240795-25240853)
chr8 (272-321)||(12814863-12814912)
chr8 (136-169)||(27750591-27750624)
[»] chr6 (30 HSPs)
chr6 (169-267)||(21276079-21276177)
chr6 (406-580)||(24564060-24564238)
chr6 (393-549)||(26965241-26965395)
chr6 (170-226)||(21936408-21936464)
chr6 (463-569)||(30425286-30425393)
chr6 (172-226)||(12909621-12909675)
chr6 (172-226)||(12934728-12934782)
chr6 (171-255)||(11182989-11183073)
chr6 (169-241)||(20751880-20751951)
chr6 (493-548)||(24542089-24542144)
chr6 (169-228)||(21937970-21938029)
chr6 (494-574)||(21322920-21323000)
chr6 (492-559)||(17235029-17235096)
chr6 (492-545)||(25969775-25969828)
chr6 (492-545)||(25974215-25974268)
chr6 (492-556)||(23882358-23882422)
chr6 (510-548)||(16309027-16309065)
chr6 (495-545)||(19077581-19077631)
chr6 (298-370)||(21323501-21323572)
chr6 (515-580)||(19658373-19658438)
chr6 (492-545)||(19894341-19894394)
chr6 (295-363)||(11960338-11960406)
chr6 (413-479)||(28623886-28623954)
chr6 (411-490)||(20558643-20558724)
chr6 (389-448)||(11960810-11960865)
chr6 (492-545)||(14259351-14259404)
chr6 (492-545)||(17527557-17527610)
chr6 (492-545)||(17855630-17855683)
chr6 (492-545)||(21723078-21723131)
chr6 (492-545)||(33666226-33666279)
[»] chr5 (26 HSPs)
chr5 (169-267)||(9877339-9877437)
chr5 (170-267)||(9872225-9872322)
chr5 (169-267)||(39904151-39904249)
chr5 (169-267)||(39909264-39909362)
chr5 (170-252)||(13556105-13556187)
chr5 (169-226)||(43540563-43540620)
chr5 (169-217)||(2024420-2024468)
chr5 (169-221)||(4555967-4556019)
chr5 (175-250)||(24091794-24091869)
chr5 (206-263)||(2024354-2024411)
chr5 (272-381)||(25668209-25668318)
chr5 (295-357)||(13942236-13942298)
chr5 (161-227)||(35368614-35368680)
chr5 (492-545)||(22251713-22251766)
chr5 (492-545)||(24190296-24190349)
chr5 (389-479)||(22184332-22184420)
chr5 (492-545)||(25105117-25105170)
chr5 (492-545)||(25164210-25164263)
chr5 (389-580)||(13941643-13941827)
chr5 (510-550)||(22130515-22130555)
chr5 (492-548)||(24117977-24118033)
chr5 (492-543)||(23420230-23420281)
chr5 (272-374)||(17661633-17661731)
chr5 (492-545)||(22404434-22404487)
chr5 (492-545)||(23757928-23757981)
chr5 (492-545)||(23823384-23823437)
[»] chr4 (39 HSPs)
chr4 (169-267)||(35091221-35091319)
chr4 (170-267)||(35096334-35096431)
chr4 (170-265)||(32429034-32429129)
chr4 (169-265)||(3424113-3424208)
chr4 (393-551)||(32861982-32862140)
chr4 (169-241)||(34279253-34279325)
chr4 (166-226)||(47071758-47071818)
chr4 (169-227)||(22119073-22119131)
chr4 (493-549)||(33746354-33746410)
chr4 (417-559)||(41785791-41785936)
chr4 (170-226)||(14643526-14643582)
chr4 (295-375)||(41785293-41785373)
chr4 (407-551)||(15687376-15687520)
chr4 (170-224)||(3409329-3409383)
chr4 (179-252)||(54858987-54859060)
chr4 (170-228)||(25618050-25618108)
chr4 (206-263)||(18716850-18716907)
chr4 (206-263)||(18737523-18737580)
chr4 (168-252)||(34128120-34128205)
chr4 (170-226)||(34601825-34601881)
chr4 (214-265)||(3409393-3409444)
chr4 (492-545)||(10191320-10191373)
chr4 (492-545)||(18601332-18601385)
chr4 (174-223)||(18737586-18737634)
chr4 (170-226)||(30019638-30019692)
chr4 (510-551)||(31971379-31971420)
chr4 (174-226)||(18716907-18716958)
chr4 (510-550)||(33740104-33740144)
chr4 (492-559)||(28019736-28019803)
chr4 (463-580)||(16654969-16655087)
chr4 (510-575)||(9069398-9069463)
chr4 (531-580)||(10197879-10197928)
chr4 (275-372)||(16655560-16655656)
chr4 (411-490)||(21478457-21478538)
chr4 (221-265)||(18671198-18671242)
chr4 (295-375)||(32861520-32861600)
chr4 (335-374)||(2679746-2679785)
chr4 (500-546)||(23399868-23399914)
chr4 (492-545)||(25117289-25117342)
[»] chr1 (37 HSPs)
chr1 (169-267)||(28574603-28574701)
chr1 (169-267)||(28598615-28598713)
chr1 (170-265)||(43359110-43359205)
chr1 (170-267)||(3468374-3468471)
chr1 (271-364)||(17379851-17379943)
chr1 (167-241)||(16051517-16051591)
chr1 (492-580)||(51471723-51471811)
chr1 (493-548)||(12753497-12753552)
chr1 (271-366)||(17356057-17356151)
chr1 (171-226)||(17414304-17414359)
chr1 (172-226)||(13654676-13654730)
chr1 (172-226)||(35653036-35653090)
chr1 (170-226)||(1188333-1188389)
chr1 (176-226)||(19311180-19311230)
chr1 (198-263)||(3701293-3701358)
chr1 (494-575)||(8282364-8282445)
chr1 (411-548)||(25349871-25350011)
chr1 (181-226)||(10186056-10186101)
chr1 (271-368)||(51472317-51472413)
chr1 (183-226)||(1188178-1188221)
chr1 (170-224)||(3696111-3696165)
chr1 (411-549)||(10339825-10339967)
chr1 (405-580)||(1625926-1626097)
chr1 (496-545)||(4246475-4246524)
chr1 (174-226)||(10186307-10186359)
chr1 (169-227)||(21430776-21430833)
chr1 (206-263)||(17414359-17414416)
chr1 (170-223)||(35626539-35626591)
chr1 (492-556)||(17851036-17851100)
chr1 (588-687)||(19819153-19819253)
chr1 (309-372)||(8281796-8281858)
chr1 (492-559)||(13165828-13165895)
chr1 (511-546)||(17355492-17355527)
chr1 (511-546)||(17379284-17379319)
chr1 (411-479)||(47941081-47941151)
chr1 (492-545)||(20200758-20200811)
chr1 (295-336)||(33062244-33062285)
[»] chr2 (25 HSPs)
chr2 (170-267)||(14917183-14917280)
chr2 (168-267)||(17719998-17720097)
chr2 (169-267)||(17720326-17720424)
chr2 (170-267)||(39178905-39179002)
chr2 (170-267)||(30283251-30283348)
chr2 (170-267)||(45120693-45120790)
chr2 (389-491)||(21249926-21250026)
chr2 (169-224)||(42780542-42780597)
chr2 (406-490)||(36398522-36398608)
chr2 (492-545)||(24789832-24789885)
chr2 (270-346)||(13315215-13315291)
chr2 (295-375)||(21250418-21250498)
chr2 (271-374)||(27106713-27106814)
chr2 (492-580)||(31587917-31588005)
chr2 (270-336)||(29565848-29565914)
chr2 (298-370)||(19198506-19198576)
chr2 (206-255)||(20892154-20892203)
chr2 (492-545)||(22611324-22611377)
chr2 (182-218)||(20892110-20892146)
chr2 (272-324)||(23802063-23802115)
chr2 (492-559)||(12910926-12910993)
chr2 (308-375)||(22582284-22582351)
chr2 (296-373)||(31587334-31587410)
chr2 (51-84)||(678331-678364)
chr2 (510-575)||(21530834-21530899)
[»] scaffold0223 (1 HSPs)
scaffold0223 (166-267)||(1816-1917)
[»] scaffold0006 (1 HSPs)
scaffold0006 (172-226)||(144437-144491)
[»] scaffold0005 (1 HSPs)
scaffold0005 (170-226)||(173710-173766)
[»] scaffold0505 (1 HSPs)
scaffold0505 (463-545)||(9701-9786)
[»] scaffold0035 (2 HSPs)
scaffold0035 (295-368)||(34988-35061)
scaffold0035 (389-448)||(37697-37752)
[»] scaffold0024 (1 HSPs)
scaffold0024 (492-559)||(159505-159572)
[»] scaffold1001 (1 HSPs)
scaffold1001 (510-548)||(417-455)
[»] scaffold0103 (1 HSPs)
scaffold0103 (492-545)||(25350-25403)
[»] scaffold0069 (1 HSPs)
scaffold0069 (492-545)||(6342-6395)
[»] scaffold0037 (1 HSPs)
scaffold0037 (492-545)||(109932-109985)
[»] scaffold0034 (1 HSPs)
scaffold0034 (510-551)||(73899-73940)
[»] scaffold0359 (1 HSPs)
scaffold0359 (492-528)||(2353-2389)
[»] scaffold0185 (1 HSPs)
scaffold0185 (492-559)||(2026-2093)
[»] scaffold0423 (1 HSPs)
scaffold0423 (340-374)||(15214-15248)
[»] scaffold0064 (2 HSPs)
scaffold0064 (510-548)||(45594-45632)
scaffold0064 (510-548)||(52600-52638)
[»] scaffold0338 (1 HSPs)
scaffold0338 (411-490)||(15943-16024)


Alignment Details
Target: chr3 (Bit Score: 609; Significance: 0; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 609; E-Value: 0
Query Start/End: Original strand, 8 - 782
Target Start/End: Complemental strand, 269725 - 268965
Alignment:
Q  8 atttctttgtttaaaattggcttaatggattatccggtctcgcaacttaattctttattttaaagtggtcacataacgtcttaatttgttctcttatctc 107  Q
    |||||||||||||||||||||||||||||||||| ||||||  ||||| |||||||||        ||||       ||||||||||||||||||||||     
T  269725 atttctttgtttaaaattggcttaatggattatctggtctc--aactttattctttat--------ggtc-------gtcttaatttgttctcttatctt 269643  T
Q  108 tattttcgtcactcaagtttgtcatctacgttagtattttgcaaaatatgttaattcatttttgttggtgatttccaaaataatggaatcactttagaac 207  Q
     |||||||||| |||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  269642 aattttcgtcagtcaagtttgtcatctatgttagtattttgtaaaatatgttaactcatttttgttggtgatttccaaaataatggaatcactttagaat 269543  T
Q  208 caaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattatagattgaaattctagcgcgttagttagaagatgttctatg 307  Q
    ||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  269542 caaaagttgtagctctttatggaaaccattcatatatattggaacattattatttattatagattgaaattctagcgcgttagttagaagatgttctatg 269443  T
Q  308 cgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaacaaa-ataaaaggcatagaaggctcacaaataacaa 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  269442 cgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaacaaacataaaaggcatagaaggctcacaaataacaa 269343  T
Q  407 aaacacagtcctagacttgcatcaaaatgatacaagagaagacacataaagaacacgactcaaaaccctaaaagttattcttttgatgacggcttgaatg 506  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  269342 aaacacaatcctagacttgcatcaaaacgatacaagagaagacacataaagaacacgactcaaaaccctaaaagttattcttttgatgacggcttgaatg 269243  T
Q  507 aataattaggtcttgaagtcttg--tatatatactgaagcaatatggactaaatagtcttgttggccttcaaaacagtacgctagtgaatcgattcagac 604  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  269242 aataattaggtcttgaagtcttgtatatatatactgaagcaatatggactaaatagtcttgttgggcttcaaaacagtacgctagtgaatcgattcagac 269143  T
Q  605 tacttatgatacaattcactagaacacatagaccacaatgcaaatttgaaaacttgttaacaccatttatgacacacatgatgaacactatcatttgtaa 704  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  269142 tacttatgatacaattcactagaacacatagaccacaatgcaaatttgaaaacttgttaacaccatttgtgacacacatgatgcacactatcatttgtaa 269043  T
Q  705 gacacatgatgcacactaattttgttcatgacatttagacttaccagggtgcttgtacaatctaaactagctaaagaa 782  Q
     ||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  269042 cacacatgatgcacactaattttgttcatgacatttagacttactagggcgcttgtacaatctaaactagctaaagaa 268965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 4050212 - 4050114
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  4050212 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 4050114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 4055346 - 4055248
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  4055346 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 4055248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 5481288 - 5481386
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  5481288 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 5481386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 6857855 - 6857953
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  6857855 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 6857953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 10584654 - 10584756
Alignment:
Q  165 atttttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttat 264  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  10584654 atttatgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttat 10584753  T
Q  265 tat 267  Q
    |||    
T  10584754 tat 10584756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 10672738 - 10672836
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  10672738 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 10672836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 10677851 - 10677949
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  10677851 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 10677949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 1302045 - 1302142
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1302045 tgttggtaatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatatattggaacattattatttattat 1302142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 6852753 - 6852850
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  6852753 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 6852850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 8465153 - 8465056
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  8465153 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 8465056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 8458716 - 8458618
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  8458716 ttgttggtgatttccaaaataatggaatcactttagaactaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 8458618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 10591095 - 10591193
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  10591095 ttgtcggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 10591193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 31081307 - 31081405
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||||||    
T  31081307 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtgactcttcatgggaaccattcatatacattggaacattattatttattat 31081405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 33702400 - 33702497
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||    
T  33702400 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacataggaacattattatttattat 33702497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 31076201 - 31076296
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttatt 265  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| | |||||||||||||||||||||    
T  31076201 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtgactcttcatggaaaccattcatatacattggaacattattatttatt 31076296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 49784949 - 49784854
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttatt 265  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| || |||||||| | |||||||||||||||||||||    
T  49784949 tgttggtgatttccaaaataatagaatcactttaaaaccaaaagttgtaactcttcatggaaatcattcatatacattggaacattattatttatt 49784854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 172 - 263
Target Start/End: Complemental strand, 20891550 - 20891459
Alignment:
Q  172 ttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattattta 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | |||| || |||||||||||    
T  20891550 ttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgagaatcattcatatacattgaaaaattattattta 20891459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 5457817 - 5457909
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||     ||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  5457817 tgttggtgatttccaaaataatggaat-----tagaatcaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 5457909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 389 - 479
Target Start/End: Complemental strand, 15674924 - 15674837
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatcaaaatgatacaagagaag-acacataaagaacacgactcaaaaccctaaaa 479  Q
    |||||||||||||||||||    ||||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  15674924 aaggctcacaaataacaaa----cagtcctagacttgcatcaaagtgatacaagggaagaacacacaaagaacacgactcaaaaccctaaaa 15674837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 29827886 - 29827829
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  29827886 ttgttggtgatttccaaaagaatggaatcactttagaatcaaaagttgtaactcttca 29827829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 18023913 - 18023965
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaact 221  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18023913 ttgttggtgatttccaaaataatggaatcactttataaccaaaagttgtaact 18023965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 492 - 559
Target Start/End: Complemental strand, 23954284 - 23954217
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaata 559  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||||||||||| | ||| |||||||    
T  23954284 atgacggcttgaatgaacaattaggtcttgaagtcttctttatatactgaagcagtttgggctaaata 23954217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 510 - 575
Target Start/End: Complemental strand, 6579254 - 6579189
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttca 575  Q
    ||||||||||||||||||||| |||||| |||||||||| |||  ||||||||||||||| |||||    
T  6579254 aattaggtcttgaagtcttgtttatatattgaagcaatacggatcaaatagtcttgttgggcttca 6579189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 492 - 556
Target Start/End: Complemental strand, 21253721 - 21253657
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaa 556  Q
    |||| |||||||||||||||||||||||||| |||||   |||||||||||||||||||| ||||    
T  21253721 atgagggcttgaatgaataattaggtcttgatgtcttcattatatactgaagcaatatgggctaa 21253657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 17042476 - 17042425
Alignment:
Q  493 tgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagc 544  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  17042476 tgacggcttgaatgaataattaaatcttgaagtcttgaatatatactgaagc 17042425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 18548083 - 18548136
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||| |||||||| |||||||||| | ||||||||||||||    
T  18548083 atgacggcttgaatgaacaattaggttttgaagtcttctttatatactgaagca 18548136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 24195958 - 24196011
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||| |||||||||||||||||||   ||||||||||||||    
T  24195958 atgacggcttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 24196011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 550
Target Start/End: Complemental strand, 7478843 - 7478803
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatg 550  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  7478843 aattaggtcttgtagtcttgtatatatactgaagcaatatg 7478803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 411 - 489
Target Start/End: Original strand, 11656372 - 11656452
Alignment:
Q  411 acagtcctagacttgcatca-aaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagttattcttt 489  Q
    |||||||||||||||||||| ||| |||||||||||||| |||| |  ||| |||||||||||||||||||  ||||||||    
T  11656372 acagtcctagacttgcatcacaaacgatacaagagaagaacacacatggaaaacgactcaaaaccctaaaaactattcttt 11656452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 224
Target Start/End: Original strand, 18023324 - 18023376
Alignment:
Q  172 ttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactctt 224  Q
    |||||||||||||||||||||||||||||||||||   |||||||||| ||||    
T  18023324 ttggtgatttccaaaataatggaatcactttagaattgaaagttgtaagtctt 18023376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 13918265 - 13918324
Alignment:
Q  492 atgacggcttgaatgaat-aattaggtcttgaagtcttgtatatatactgaagcaatatg 550  Q
    |||||||||| | ||||| ||| |||||||| ||||||||||||||||||||||||||||    
T  13918265 atgacggcttcagtgaatgaatcaggtcttgtagtcttgtatatatactgaagcaatatg 13918324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 492 - 543
Target Start/End: Complemental strand, 18034621 - 18034570
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaag 543  Q
    ||||||||||||||||| |||||||||||||||||||   ||||||||||||    
T  18034621 atgacggcttgaatgaaaaattaggtcttgaagtcttacttatatactgaag 18034570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 492 - 559
Target Start/End: Original strand, 19634315 - 19634382
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaata 559  Q
    |||||||||||||| || |||||||||||||||||||   |||||||||||||||  ||| |||||||    
T  19634315 atgacggcttgaattaacaattaggtcttgaagtcttccttatatactgaagcaacttgggctaaata 19634382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 1918970 - 1918917
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||| ||||||||||| |||||||   ||||||||||||||    
T  1918970 atgacggcttgaatgaacaattaggtcttaaagtcttccttatatactgaagca 1918917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 3551963 - 3551910
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||| |||||||||||| ||| ||||||  |||||||||||||||||||||||    
T  3551963 atgacagcttgaatgaatgatttggtcttctagtcttgtatatatactgaagca 3551910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 551
Target Start/End: Original strand, 13914243 - 13914284
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatgg 551  Q
    |||||||||||| |||||||||||||||||| ||||||||||    
T  13914243 aattaggtcttgtagtcttgtatatatactgtagcaatatgg 13914284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 17135870 - 17135818
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||| |||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  17135870 atgatggcttgaatgaacaattaggtcttgaagtcttat-tatatactgaagca 17135818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 18063932 - 18063879
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||| |||||||| ||||||||||   ||||||||||||||    
T  18063932 atgacggcttgaatgaacaattaggtattgaagtcttccttatatactgaagca 18063879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 18483098 - 18483045
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||| |||||||||| |||||||||||||||||||   ||||||||||||||    
T  18483098 atgacgacttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 18483045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 492 - 550
Target Start/End: Complemental strand, 286621 - 286563
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatg 550  Q
    ||||||||||||||   ||||||||||||||||||||   |||||||| ||||||||||    
T  286621 atgacggcttgaatacctaattaggtcttgaagtcttccttatatactaaagcaatatg 286563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 272 - 366
Target Start/End: Complemental strand, 3554659 - 3554566
Alignment:
Q  272 tgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcat 366  Q
    ||||||||||||  || ||||  ||||||||||||||||| ||||||||||||   |||| || ||| |||||||  ||||||||| ||||||||    
T  3554659 tgaaattctagcaagtaagttttaagatgttctatgcgatcttccaacaccagacgcaca-aatacgaatgttgaacttaatgtttcaacatcat 3554566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 580
Target Start/End: Complemental strand, 7495641 - 7495572
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    |||||||||||| | |||||||||||||||||||||||||||  || | | ||||||||| ||||| ||||    
T  7495641 aattaggtcttgta-tcttgtatatatactgaagcaatatgggttataaaatcttgttgggcttcagaaca 7495572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 18023978 - 18024028
Alignment:
Q  213 gttgtaactcttcatgggaaccattcatacatattggaacattattattta 263  Q
    ||||||||||||||| |||| || ||||| | |||||||||||||||||||    
T  18023978 gttgtaactcttcataggaatcaatcatatacattggaacattattattta 18024028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 20747965 - 20747891
Alignment:
Q  418 tagacttgcatca-aaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagttattctttt 490  Q
    ||||||||||||| ||| |||||||||||||| |||| |  ||| |||||||||||||||||||  |||||||||    
T  20747965 tagacttgcatcacaaacgatacaagagaagaacacacatggaagacgactcaaaaccctaaaaactattctttt 20747891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 263
Target Start/End: Original strand, 3187246 - 3187339
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattattta 263  Q
    |||| |||||||  |||| ||| ||||||||||| || |||||||||||| | || ||| ||| ||||||||   ||||||||| |||||||||    
T  3187246 tgtttgtgatttttaaaacaattgaatcactttaaaatcaaaagttgtaattttttatgagaatcattcatatgcattggaacaatattattta 3187339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 13791111 - 13791164
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||||||||| |  |||||||||||||||||||   ||||||||||||||    
T  13791111 atgacggcttgaataatcaattaggtcttgaagtcttccttatatactgaagca 13791164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 44452918 - 44452970
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||||||||| || |||||||||||||||||||   ||||||||||||||    
T  44452918 atgacggcttgaat-aacaattaggtcttgaagtctttcttatatactgaagca 44452970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 3e-44; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 168 - 267
Target Start/End: Complemental strand, 12857194 - 12857095
Alignment:
Q  168 tttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  12857194 tttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 12857095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 26051425 - 26051327
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  26051425 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 26051327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 26056538 - 26056440
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  26056538 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 26056440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 26060784 - 26060686
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  26060784 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 26060686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 26065897 - 26065799
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  26065897 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 26065799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 12852080 - 12851982
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||  |||||||||||||||||    
T  12852080 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattgttacattattatttattat 12851982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 417 - 569
Target Start/End: Original strand, 21260787 - 21260943
Alignment:
Q  417 ctagacttgcatcaaaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagttattcttttg---atgacggcttgaatgaataat 512  Q
    ||||||||||||||||| |||||||||||||| ||||  |||||||||||||||||||||||||  |||||||||    |||||| ||||||||||||||    
T  21260787 ctagacttgcatcaaaacgatacaagagaagaacacactaagaacacgactcaaaaccctaaaaactattcttttagaaatgacgacttgaatgaataat 21260886  T
Q  513 taggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttgg 569  Q
    ||||||||||||||||   |||||||||||||||||||| || ||||  ||||||||    
T  21260887 taggtcttgaagtcttccttatatactgaagcaatatgggctcaataaccttgttgg 21260943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 405 - 528
Target Start/End: Complemental strand, 10038543 - 10038418
Alignment:
Q  405 aaaaacacagtcctagacttgcatcaaaatgatacaagagaagacacataaagaacacgactcaaaaccctaaaagttattctttt--gatgacggcttg 502  Q
    ||||| ||| || |||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||  |||||||||   |||||||||||    
T  10038543 aaaaaaacaatcttagacttgcatcaaaacgatacaagagaagacgcacaaagaacacgactcaaaaccctaaaaactattcttttagaatgacggcttg 10038444  T
Q  503 aatgaataattaggtcttgaagtctt 528  Q
    |||   ||||||||||||||||||||    
T  10038443 aatacctaattaggtcttgaagtctt 10038418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 389 - 551
Target Start/End: Complemental strand, 7586357 - 7586196
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatcaaaatgatacaagagaagac-acataaagaacacgactcaaaaccctaaaagttattct 487  Q
    |||||||||||||||||||    || |||||||||| |||||||| ||||||||||||||  ||| |||||||| |||||||||||||||||  ||||||    
T  7586357 aaggctcacaaataacaaa----caatcctagactttcatcaaaacgatacaagagaagaatacacaaagaacatgactcaaaaccctaaaaactattct 7586262  T
Q  488 tttg--atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatgg 551  Q
    |||   ||||||||||||||    |||||| ||||||||||||   ||||||||||||||||||||    
T  7586261 tttagaatgacggcttgaataccaaattagatcttgaagtcttccttatatactgaagcaatatgg 7586196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 389 - 551
Target Start/End: Complemental strand, 23082602 - 23082440
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatca-aaatgatacaagagaag-acacataaagaacacgactcaaaaccctaaaagttattc 486  Q
    |||||||||||||||||||    || |||||||||||||||| ||| ||||||| ||||| ||||| ||||||||||||||||||||||||||  ||||     
T  23082602 aaggctcacaaataacaaa----caatcctagacttgcatcacaaacgatacaaaagaagtacacacaaagaacacgactcaaaaccctaaaaactattt 23082507  T
Q  487 ttttg--atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatgg 551  Q
    ||||   ||| ||||||||||   |||||||||||| |||||||   ||||||||||||||||||||    
T  23082506 ttttagaatggcggcttgaatacctaattaggtcttcaagtcttccttatatactgaagcaatatgg 23082440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 14610698 - 14610635
Alignment:
Q  204 gaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  14610698 gaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 14610635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 389 - 545
Target Start/End: Complemental strand, 23579782 - 23579624
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatcaaaatgatacaagagaagacacataaagaacac-gactcaaaaccctaaaagttat--t 485  Q
    |||||||| ||||||||||  ||| ||||||||||||| |||||| |||||||||| ||||||| ||  ||||  |||| ||||||||||||  |||  |    
T  23579782 aaggctcataaataacaaa--cactgtcctagacttgcttcaaaacgatacaagagtagacacacaattaacaaagactaaaaaccctaaaaactatatt 23579685  T
Q  486 cttttga-tgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||| || ||| || |||||||||||||||||||||  ||||||||||||||||| |||||    
T  23579684 ctttagaatgatggtttgaatgaataattaggtcttctagtcttgtatatatactaaagca 23579624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 2248852 - 2248909
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  2248852 ttgttggtgatttctaaaataatggaatcactttagaaccaaaagtagtaactcttca 2248909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 389 - 575
Target Start/End: Original strand, 23960359 - 23960545
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatca-aaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagt-tatt 485  Q
    |||||||||||||||||||    ||||| ||||||||||||| ||| || ||||||||||| |||| |||| | |||||||||||||||||||   ||||    
T  23960359 aaggctcacaaataacaaa----cagtcatagacttgcatcacaaacgagacaagagaagaacacacaaaggaaacgactcaaaaccctaaaaaactatt 23960454  T
Q  486 cttttga-tgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttca 575  Q
    |||| || |||||||||||||   || |||||||||||| ||||   |||||||||||||||||||  || ||||  |||||||| |||||    
T  23960455 ctttagaatgacggcttgaatacctagttaggtcttgaaatcttccttatatactgaagcaatatgagctcaataaccttgttgggcttca 23960545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 389 - 479
Target Start/End: Original strand, 24902436 - 24902524
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatca-aaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaa 479  Q
    |||| ||||||||||||||    |||||||||| |||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||||    
T  24902436 aaggttcacaaataacaaa----cagtcctagatttgcatcacaaacgatacaagagaagaacacacaaagaacacgactcaaaaccctaaaa 24902524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 4181276 - 4181330
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactctt 224  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| |||||||    
T  4181276 tgttggtgatttccaaaataatggaatcactttaaaatcaaaagttgcaactctt 4181330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 273 - 375
Target Start/End: Original strand, 24901945 - 24902047
Alignment:
Q  273 gaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaac 372  Q
    ||||||||||| |  |||||  ||||||||||||||||||||||||||||||   || ||||||| ||||||| ||||||||||  ||| | ||||||||    
T  24901945 gaaattctagcacactagttttaagatgttctatgcgatgttccaacaccagaaccaaagaaaacagatgttgcgtttaatgttccaacgttatgctaac 24902044  T
Q  373 aaa 375  Q
    |||    
T  24902045 aaa 24902047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 523 - 580
Target Start/End: Original strand, 10251852 - 10251909
Alignment:
Q  523 agtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    |||||||||||||||||||||||||| || ||||||||||||||||| ||||| ||||    
T  10251852 agtcttgtatatatactgaagcaatacgggctaaatagtcttgttgggcttcagaaca 10251909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 580
Target Start/End: Original strand, 6045648 - 6045841
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatca-aaatgatacaagagaag-acacataaagaacacgactcaaaaccct-----aaaagt 481  Q
    ||||||||||||||||||    ||| |||||||||||||||| ||||||||||||||||| ||||| |||||||   |||||||||| |     ||||      
T  6045648 aaggctcacaaataacaa----acaatcctagacttgcatcacaaatgatacaagagaagaacacacaaagaac---actcaaaaccttaaaaaaaaaac 6045740  T
Q  482 tattctttt--gatgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaac 579  Q
    |||| ||||   ||||| ||||||||   ||||||||||||||||||||   | |||||||||| ||||||| |||||||  |||||||| ||||| |||    
T  6045741 tattattttagtatgacagcttgaatacctaattaggtcttgaagtcttccttttatactgaagaaatatgggctaaataaccttgttgggcttcagaac 6045840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 494 - 575
Target Start/End: Original strand, 19295192 - 19295271
Alignment:
Q  494 gacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttca 575  Q
    |||||||| ||||| | ||||||||||||||||||| ||||||||||||| |||| || ||  ||||||||||||| |||||    
T  19295192 gacggcttaaatgactgattaggtcttgaagtcttgaatatatactgaagaaatacgggct--atagtcttgttgggcttca 19295271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 645569 - 645622
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||||||||| || ||||||||||||||||||| | ||||||||||||||    
T  645569 atgacggcttgaataaagaattaggtcttgaagtcttctttatatactgaagca 645622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 4459174 - 4459227
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||||| |||||    
T  4459174 atgacggcttgaatgagcaattaggtcttgaagtcttgtttatatactaaagca 4459227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 510 - 551
Target Start/End: Original strand, 9567355 - 9567396
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatgg 551  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  9567355 aattaggtcttgtagtcttgtatatatactgaagcaatatgg 9567396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 510 - 575
Target Start/End: Original strand, 10661316 - 10661381
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttca 575  Q
    |||||||||||||||| |||| ||||||||||||||||| ||   ||||||||||||||| |||||    
T  10661316 aattaggtcttgaagttttgtttatatactgaagcaatacgggtcaaatagtcttgttgggcttca 10661381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 580
Target Start/End: Original strand, 14927099 - 14927171
Alignment:
Q  508 ataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    |||||||||||||||||||||   | |||||||||||||||||| | |||| |||||||||| ||||| ||||    
T  14927099 ataattaggtcttgaagtcttccttttatactgaagcaatatgggccaaatggtcttgttgggcttcagaaca 14927171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 580
Target Start/End: Original strand, 15350565 - 15350637
Alignment:
Q  508 ataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    |||||||||||||||||||||   | |||||||||||||||||| | |||| |||||||||| ||||| ||||    
T  15350565 ataattaggtcttgaagtcttccttttatactgaagcaatatgggccaaatggtcttgttgggcttcagaaca 15350637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 494 - 545
Target Start/End: Original strand, 11588900 - 11588951
Alignment:
Q  494 gacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||| |||||||||||||||||||   ||||||||||||||    
T  11588900 gacggcttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 11588951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 492 - 559
Target Start/End: Original strand, 14165600 - 14165667
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaata 559  Q
    ||||||||||||||||| |||||||||||||||||||   | |||||||||||||  ||| |||||||    
T  14165600 atgacggcttgaatgaacaattaggtcttgaagtcttccttttatactgaagcaacttgggctaaata 14165667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 568
Target Start/End: Original strand, 42636672 - 42636730
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttg 568  Q
    |||||||||||||| |||||| ||||||||||||||||| ||   ||||||||||||||    
T  42636672 aattaggtcttgaaatcttgtttatatactgaagcaatacgggtcaaatagtcttgttg 42636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 551
Target Start/End: Complemental strand, 4794291 - 4794250
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatgg 551  Q
    |||||||||||| ||||||||||||||||| |||||||||||    
T  4794291 aattaggtcttgtagtcttgtatatatactaaagcaatatgg 4794250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 580
Target Start/End: Complemental strand, 26132737 - 26132563
Alignment:
Q  402 aacaaaaacacagtcctagacttgcatcaaaatgatacaagagaagacacataaagaacacgactcaaaaccctaaaagtt-attcttttga-tgacggc 499  Q
    |||||| | ||||| ||| ||||||||||| | |||||||||| ||||||| |||||      ||||||||||||||| |  | | ||| || |||||||    
T  26132737 aacaaacaaacagtactaaacttgcatcaacacgatacaagagtagacacacaaaga------ctcaaaaccctaaaactagactttttagaatgacggc 26132644  T
Q  500 ttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    ||||||   ||||||||||||||||||||   |||||||||||| ||||||| || | ||  |||||||| ||||| ||||    
T  26132643 ttgaatacctaattaggtcttgaagtcttccttatatactgaagaaatatgggctgattaaccttgttgggcttcagaaca 26132563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 37459702 - 37459759
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||| |||||||  |||||||||||||||||||| || |||||||| ||||||||||    
T  37459702 ttgttagtgatttttaaaataatggaatcactttaaaatcaaaagttttaactcttca 37459759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 492 - 548
Target Start/End: Original strand, 24049875 - 24049931
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaata 548  Q
    |||||||||||||| |  |||||||||||| |||||||| || ||||||||||||||    
T  24049875 atgacggcttgaataatgaattaggtcttgcagtcttgtttaaatactgaagcaata 24049931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 295 - 346
Target Start/End: Complemental strand, 11560808 - 11560757
Alignment:
Q  295 aagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttga 346  Q
    ||||||||||||| ||||||||||||| || |||| ||||||| ||||||||    
T  11560808 aagatgttctatgagatgttccaacacgagttacatagaaaacagatgttga 11560757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 463 - 545
Target Start/End: Original strand, 15506670 - 15506753
Alignment:
Q  463 gactcaaaaccctaaaagt-tattcttttgatgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||| | ||  ||||  |||||||||||||| |  |||||||||||||||||||   ||||||||||||||    
T  15506670 gactcaaaaccctaaaaatctaaactttgtatgacggcttgaataagcaattaggtcttgaagtcttccttatatactgaagca 15506753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 298 - 329
Target Start/End: Complemental strand, 23385803 - 23385772
Alignment:
Q  298 atgttctatgcgatgttccaacaccaggtaca 329  Q
    ||||||||||||||||||||||||||||||||    
T  23385803 atgttctatgcgatgttccaacaccaggtaca 23385772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 270 - 344
Target Start/End: Original strand, 21260348 - 21260422
Alignment:
Q  270 attgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgtt 344  Q
    |||||||||||||| |  |||||  ||||||||| ||||||||||| |||||||   |||||||||||| |||||    
T  21260348 attgaaattctagcacactagttttaagatgttcaatgcgatgttctaacaccaaaaacacagaaaacgaatgtt 21260422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 335
Target Start/End: Original strand, 30225951 - 30225989
Alignment:
Q  297 gatgttctatgcgatgttccaacaccaggtacacagaaa 335  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  30225951 gatgttctatgcgatgttccaacaccaattacacagaaa 30225989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 323
Target Start/End: Complemental strand, 4548072 - 4548019
Alignment:
Q  270 attgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacacca 323  Q
    ||||||||||| || |||||||   ||||||||||||| |||||||||||||||    
T  4548072 attgaaattctggcacgttagtcttaagatgttctatgtgatgttccaacacca 4548019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 11521138 - 11521085
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||||||||| |  |||||||||||||||||||   ||||||||||||||    
T  11521138 atgacggcttgaataatcaattaggtcttgaagtcttccttatatactgaagca 11521085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 333 - 374
Target Start/End: Original strand, 14687263 - 14687304
Alignment:
Q  333 aaaacggatgttgagtttaatgtttaaacatcatgctaacaa 374  Q
    |||||| |||||||| |||||||||||||||| |||||||||    
T  14687263 aaaacgaatgttgagattaatgtttaaacatcgtgctaacaa 14687304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 270 - 374
Target Start/End: Original strand, 19352965 - 19353067
Alignment:
Q  270 attgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgct 369  Q
    |||||||||||  |||||||| |   ||||||| || || ||||||||||||||   ||||| || ||| | ||||||||||||||||||||||  ||||    
T  19352965 attgaaattctgtcgcgttagctttcagatgttttaagcaatgttccaacaccaa--acacaaaagacgaaagttgagtttaatgtttaaacattgtgct 19353062  T
Q  370 aacaa 374  Q
    |||||    
T  19353063 aacaa 19353067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 23580274 - 23580226
Alignment:
Q  271 ttgaaattctagcgcgttagttagaagatgttctatgcgatgttccaaca 320  Q
    ||||||||||||| ||||||||  |||||||||||| |||||||||||||    
T  23580274 ttgaaattctagcacgttagttt-aagatgttctattcgatgttccaaca 23580226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 35352121 - 35352166
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagtt 215  Q
    |||||||||||||| |||||||| ||| ||||||||| ||||||||    
T  35352121 tgttggtgatttccgaaataatgaaattactttagaatcaaaagtt 35352166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 1e-43; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 14318415 - 14318513
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  14318415 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 14318513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 26986789 - 26986887
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  26986789 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 26986887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 34108635 - 34108537
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  34108635 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 34108537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 26981676 - 26981773
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  26981676 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 26981773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 18493978 - 18494075
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  18493978 tgttggtgatttccaaaataatggaatcaatttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 18494075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 14314710 - 14314809
Alignment:
Q  168 tttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| || | |||||||||||||||||||||||    
T  14314710 tttgttggtgattttcaaaataatggaattactttagaaccaaaagttgtaactcttaatgggaaccattcgtatacattggaacattattatttattat 14314809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 389 - 580
Target Start/End: Complemental strand, 20254703 - 20254512
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatcaaaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagttattct 487  Q
    |||||||||||||||||||    |||||||||| ||||||||||| |||| ||||||||| |||| ||||||||||| |||||| |||||||  || |||    
T  20254703 aaggctcacaaataacaaa----cagtcctagatttgcatcaaaacgatataagagaagaacacacaaagaacacgaatcaaaaacctaaaaactactct 20254608  T
Q  488 tttg---atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    |||    |||||||||||||||||||||||||||||||||||||   |||||||||||| ||||| | || ||||  |||||||| ||||| ||||    
T  20254607 tttagaaatgacggcttgaatgaataattaggtcttgaagtctttcttatatactgaaggaatataggctcaataaccttgttgggcttcagaaca 20254512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 589 - 664
Target Start/End: Original strand, 18552109 - 18552185
Alignment:
Q  589 gtgaatcgattcagactacttatgatacaattcactagaacacatagaccacaatgcaaa-tttgaaaacttgttaa 664  Q
    ||||||||||||||||| |||||||||| |||||||||||||||  |||||||||||||| ||||||||||||||||    
T  18552109 gtgaatcgattcagacttcttatgatacgattcactagaacacagtgaccacaatgcaaattttgaaaacttgttaa 18552185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 170 - 251
Target Start/End: Original strand, 43956651 - 43956732
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaa 251  Q
    ||||||||||||  ||||||||||||||||||||||| ||| |||||||||||||||||| || | |||||| | |||||||    
T  43956651 tgttggtgatttttaaaataatggaatcactttagaatcaagagttgtaactcttcatggaaatctttcatatacattggaa 43956732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 24384395 - 24384496
Alignment:
Q  271 ttgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgcta 370  Q
    |||||||||| |||||||||||   ||||||| ||||||| |||||||||||||  ||||| || ||| |||||||  ||||||||||||||| ||||||    
T  24384395 ttgaaattctggcgcgttagttttcagatgttatatgcgacgttccaacaccag--acacaaaagacgaatgttgaacttaatgtttaaacataatgcta 24384492  T
Q  371 acaa 374  Q
    ||||    
T  24384493 acaa 24384496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 10340698 - 10340745
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgt 217  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  10340698 tgttggtgatttcccaaataatggaatcactttagaaccaaaagttgt 10340745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 10340754 - 10340813
Alignment:
Q  206 accaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttatt 265  Q
    ||||| |||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  10340754 accaagagttgtaactcttcatggaaaccattcatatacattggaacattattatttatt 10340813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 18608435 - 18608479
Alignment:
Q  173 tggtgatttccaaaataatggaatcactttagaaccaaaagttgt 217  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  18608435 tggtgatttccaaaataatggaatcactttagaactaaaagttgt 18608479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 492 - 543
Target Start/End: Complemental strand, 12814321 - 12814270
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaag 543  Q
    |||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  12814321 atgaaggcttgaatgaataattaggtcttctagtcttgtatatatactgaag 12814270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 492 - 546
Target Start/End: Original strand, 22485567 - 22485621
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaa 546  Q
    ||||||||||||||||| |||||||||||||||||||   |||||||||||||||    
T  22485567 atgacggcttgaatgaacaattaggtcttgaagtcttccttatatactgaagcaa 22485621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 272 - 374
Target Start/End: Complemental strand, 1562687 - 1562589
Alignment:
Q  272 tgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaa 371  Q
    ||||||||||||||||||| |   | ||| | ||| ||||||| |||||||||    ||| ||||||||||||||| |||||||||||||||| ||||||    
T  1562687 tgaaattctagcgcgttagatttcaaatgctttatacgatgtttcaacaccag----acacaaaacggatgttgagattaatgtttaaacatcgtgctaa 1562592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 575
Target Start/End: Original strand, 9996951 - 9997016
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttca 575  Q
    ||||||||||||||||||||| ||||||| |||| |||| ||   ||||||||||||||| |||||    
T  9996951 aattaggtcttgaagtcttgtttatatacagaagtaatacgggtcaaatagtcttgttgggcttca 9997016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 1782237 - 1782181
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    |||||| |||||| ||||||||||||| | |||||||| ||||||| ||||||||||    
T  1782237 tgttggagatttctaaaataatggaattattttagaacaaaaagttataactcttca 1782181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 389 - 448
Target Start/End: Complemental strand, 23864345 - 23864290
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatcaaaatgatacaagagaaga 448  Q
    |||||||| ||||||||||    ||||||||| |||||||||||| ||||||||||||||    
T  23864345 aaggctcataaataacaaa----cagtcctaggcttgcatcaaaaagatacaagagaaga 23864290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 25240795 - 25240853
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatg 550  Q
    ||||||||||||||   ||||||||||||||||||||   | |||||||||||||||||    
T  25240795 atgacggcttgaatacctaattaggtcttgaagtcttccttctatactgaagcaatatg 25240853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 272 - 321
Target Start/End: Complemental strand, 12814912 - 12814863
Alignment:
Q  272 tgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacac 321  Q
    |||||||||||  ||||||||  ||||||||||||| |||||||||||||    
T  12814912 tgaaattctagtacgttagtttcaagatgttctatgtgatgttccaacac 12814863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 27750624 - 27750591
Alignment:
Q  136 cgttagtattttgcaaaatatgttaattcatttt 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  27750624 cgttagtattttgcaaaatctgttaattcatttt 27750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 91; Significance: 1e-43; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 21276177 - 21276079
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  21276177 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 21276079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 406 - 580
Target Start/End: Original strand, 24564060 - 24564238
Alignment:
Q  406 aaaacacagtcctagacttgcatcaaaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagttattcttttg---atgacggctt 501  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||| |||  |||||||||    ||||||||||    
T  24564060 aaaaaacagtcctagacttgcatcaaaacgatacaagagaagaacacacaaagaacacgactcaaaaccctgaaaactattcttttagaaatgacggctt 24564159  T
Q  502 gaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    |||| ||||||||| ||||||||||||   |||||||||||||||||||  || ||||  |||||||| ||||| ||||    
T  24564160 gaatcaataattagatcttgaagtcttccttatatactgaagcaatatgagctcaataaccttgttgggcttcataaca 24564238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 393 - 549
Target Start/End: Complemental strand, 26965395 - 26965241
Alignment:
Q  393 ctcacaaataacaaaaacacagtcctagacttgcatcaaaatgatacaagagaag-acacataaagaacacgactcaaaaccctaaaagttattcttttg 491  Q
    |||||||||||||||    ||| |||||||||||||||||| ||||||||||||| ||||| ||||||||||| ||||||||||||||  |||||  | |    
T  26965395 ctcacaaataacaaa----cagacctagacttgcatcaaaacgatacaagagaagaacacacaaagaacacgaatcaaaaccctaaaaactattcagtag 26965300  T
Q  492 -atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatat 549  Q
     ||  ||| ||||||| |||||||||||||||||||||   ||||||||||||||||||    
T  26965299 aatagcggtttgaatgcataattaggtcttgaagtcttccttatatactgaagcaatat 26965241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 21936408 - 21936464
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21936408 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 21936464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 463 - 569
Target Start/End: Original strand, 30425286 - 30425393
Alignment:
Q  463 gactcaaaaccctaaaa-gttattcttttgatgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagt 561  Q
    ||||||||||||||||| | ||||  ||  ||||||||||||||||  ||||| |||||| ||||||||||||||||| |||||||| || |||||||||    
T  30425286 gactcaaaaccctaaaaagctatttcttcaatgacggcttgaatgatgaattaagtcttgcagtcttgtatatatactaaagcaatacgggctaaatagt 30425385  T
Q  562 cttgttgg 569  Q
    ||||||||    
T  30425386 cttgttgg 30425393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 12909675 - 12909621
Alignment:
Q  172 ttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  12909675 ttggtgatttctaaaataatggaatcactttagaaccaaaagttgtaactcttca 12909621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 12934782 - 12934728
Alignment:
Q  172 ttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  12934782 ttggtgatttccaaaataatggaatcactctagaaccaaaagttgtaactcttca 12934728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 171 - 255
Target Start/End: Original strand, 11182989 - 11183073
Alignment:
Q  171 gttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacatt 255  Q
    |||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||| || | |||||| | |||||||||||    
T  11182989 gttggtcatttctaaaataatggaatcaatttagaaccaaatgttgtaactcttcatggaaatctttcatatacattggaacatt 11183073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 20751880 - 20751951
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcata 241  Q
    |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||| ||||| ||||||    
T  20751880 ttgttggtgatttccaaaataatggattcactttag-atcaaaagttgtaactcttcatgagaacctttcata 20751951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 493 - 548
Target Start/End: Original strand, 24542089 - 24542144
Alignment:
Q  493 tgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaata 548  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  24542089 tgacggcttgaataaataattaggtcttgaagtcttgaatatatactgaagcaata 24542144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 21938029 - 21937970
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatg 228  Q
    |||||||||||||||||||||||||||||| |||||||||| ||  ||||||||||||||    
T  21938029 ttgttggtgatttccaaaataatggaatcattttagaaccataatatgtaactcttcatg 21937970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 494 - 574
Target Start/End: Complemental strand, 21323000 - 21322920
Alignment:
Q  494 gacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttc 574  Q
    |||||||||||| |  |||||||||||||||||||||||| |||||||||||||| ||   ||||||| ||||||| ||||    
T  21323000 gacggcttgaattatcaattaggtcttgaagtcttgtataaatactgaagcaatacgggtaaaatagttttgttgggcttc 21322920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 492 - 559
Target Start/End: Original strand, 17235029 - 17235096
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaata 559  Q
    ||||||||||||||||| ||||||||||||||||||| | |||||||| ||||||  ||| |||||||    
T  17235029 atgacggcttgaatgaacaattaggtcttgaagtcttctttatatactaaagcaacttgggctaaata 17235096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 25969775 - 25969828
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||| |||||||||||||||||||   ||||||||||||||    
T  25969775 atgacggcttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 25969828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 25974215 - 25974268
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||| |||||||||||||||||||   ||||||||||||||    
T  25974215 atgacggcttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 25974268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 492 - 556
Target Start/End: Complemental strand, 23882422 - 23882358
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaa 556  Q
    ||||||||||||||||  ||||||||||||||| |||   |||||||||||||||||||| ||||    
T  23882422 atgacggcttgaatgatcaattaggtcttgaagccttccttatatactgaagcaatatgggctaa 23882358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 548
Target Start/End: Complemental strand, 16309065 - 16309027
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaata 548  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  16309065 aattaggtcttgaagtcttgtttatatactgaagcaata 16309027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 495 - 545
Target Start/End: Original strand, 19077581 - 19077631
Alignment:
Q  495 acggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||||||||| |||||||||||||||||||   ||||||||||||||    
T  19077581 acggcttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 19077631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 298 - 370
Target Start/End: Complemental strand, 21323572 - 21323501
Alignment:
Q  298 atgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgttta-aacatcatgcta 370  Q
    ||||||||||||||||||||||||||   |||||||  ||||||||||||| ||||||||| |||||| |||||    
T  21323572 atgttctatgcgatgttccaacacca--aacacagattacggatgttgagtgtaatgtttagaacatcgtgcta 21323501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 580
Target Start/End: Original strand, 19658373 - 19658438
Alignment:
Q  515 ggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    ||||||||| |||| | |||||||||||||||||||| || |||| ||||||||| ||||| ||||    
T  19658373 ggtcttgaaatcttctttatatactgaagcaatatgggctcaataatcttgttgggcttcagaaca 19658438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 19894394 - 19894341
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||| ||||||||||| |||||||||||||||||||   ||||||||||||||    
T  19894394 atgacagcttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 19894341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 363
Target Start/End: Original strand, 11960338 - 11960406
Alignment:
Q  295 aagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacat 363  Q
    |||||||| ||| ||||||||||| |||    ||||||||||||||||||||| ||||||||| |||||    
T  11960338 aagatgttatattcgatgttccaataccttacacacagaaaacggatgttgaggttaatgtttcaacat 11960406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 413 - 479
Target Start/End: Original strand, 28623886 - 28623954
Alignment:
Q  413 agtcctagacttgcatca-aaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaa 479  Q
    |||||||||||||||||| ||| |||||||||||||| |||| |  ||| |||||||||||||||||||    
T  28623886 agtcctagacttgcatcacaaacgatacaagagaagaacacacatggaagacgactcaaaaccctaaaa 28623954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 20558643 - 20558724
Alignment:
Q  411 acagtcctagacttgcatca-aaatgatacaagagaagacacataaa--gaacacgactcaaaaccctaaaagttattctttt 490  Q
    ||||| |||||||||||||| ||| |||||||||||||| ||||| |  ||| |||||||||||||||||||  |||||||||    
T  20558643 acagttctagacttgcatcacaaacgatacaagagaaga-acatacatggaagacgactcaaaaccctaaaaactattctttt 20558724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 389 - 448
Target Start/End: Original strand, 11960810 - 11960865
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatcaaaatgatacaagagaaga 448  Q
    ||||||||||| |||||||    |||||||||||||||||||| | ||||||||||||||    
T  11960810 aaggctcacaattaacaaa----cagtcctagacttgcatcaacacgatacaagagaaga 11960865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 14259351 - 14259404
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||| |||||||||  |||||||||||||||||||   ||||||||||||||    
T  14259351 atgacgacttgaatgatcaattaggtcttgaagtcttccttatatactgaagca 14259404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 17527610 - 17527557
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||  ||||||||||| |||||||   ||||||||||||||    
T  17527610 atgacggcttgaatgagcaattaggtcttaaagtcttccttatatactgaagca 17527557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 17855630 - 17855683
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||| |||||||| || |||||||||||||||||||   ||||||||||||||    
T  17855630 atgacagcttgaataaagaattaggtcttgaagtcttccttatatactgaagca 17855683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 21723131 - 21723078
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||| ||||| || ||||||| ||||||||||| | ||||||||||||||    
T  21723131 atgacggcatgaataaacaattagggcttgaagtcttctttatatactgaagca 21723078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 33666226 - 33666279
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||| ||||||||| || |||||||||||||||||||   ||||||||||||||    
T  33666226 atgatggcttgaataaacaattaggtcttgaagtcttccttatatactgaagca 33666279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 91; Significance: 1e-43; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 9877339 - 9877437
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  9877339 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 9877437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 9872225 - 9872322
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  9872225 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 9872322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 39904249 - 39904151
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  39904249 ttgttggtgatttccaaaataattgaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 39904151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 39909362 - 39909264
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||| | |||||||||||||||||||||||    
T  39909362 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcgtgtaaaccattcatatacattggaacattattatttattat 39909264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 170 - 252
Target Start/End: Original strand, 13556105 - 13556187
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaac 252  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| | |||||| | ||||||||    
T  13556105 tgttggtgatttccaaaataatggaatcactttaaaaccaagagttgtaactcttcatgggaatctttcatatacattggaac 13556187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 43540563 - 43540620
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  43540563 ttgttggtgatttccaaaataattgaatcaatttagaaccaaaagttgtaactcttca 43540620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 2024468 - 2024420
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  2024468 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgt 2024420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 169 - 221
Target Start/End: Complemental strand, 4556019 - 4555967
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaact 221  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  4556019 ttgttggtgatttccaaaataatggaatcactttagaattaaaagttgtaact 4555967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 175 - 250
Target Start/End: Original strand, 24091794 - 24091869
Alignment:
Q  175 gtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattgga 250  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||| ||| | |||||| | ||||||    
T  24091794 gtgatttccaaaataatagaatcactttagaaccaagagttgtaactctttatgagaatctttcatatacattgga 24091869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 2024411 - 2024354
Alignment:
Q  206 accaaaagttgtaactcttcatgggaaccattcatacatattggaacattattattta 263  Q
    ||||| ||||||||||||||| |||||||||||||| | |||||||||||||||||||    
T  2024411 accaagagttgtaactcttcacgggaaccattcatatacattggaacattattattta 2024354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 381
Target Start/End: Original strand, 25668209 - 25668318
Alignment:
Q  272 tgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccag--gtacacagaaaacggatgttgagtttaatgtttaaacatcatgct 369  Q
    |||||||||||| ||||||||  ||||| |||||  |||||||||||||| ||  |||||   || ||| ||||||||||||||||||||||||| ||||    
T  25668209 tgaaattctagcacgttagttttaagatattctaaacgatgttccaacactagacgtaca---aatacgaatgttgagtttaatgtttaaacatcgtgct 25668305  T
Q  370 aac-aaaataaaa 381  Q
    ||| |||||||||    
T  25668306 aactaaaataaaa 25668318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 357
Target Start/End: Complemental strand, 13942298 - 13942236
Alignment:
Q  295 aagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgttt 357  Q
    |||||||||||||||||||| |||||||    ||||||||||||||||||||| |||||||||    
T  13942298 aagatgttctatgcgatgtttcaacaccgtacacacagaaaacggatgttgaggttaatgttt 13942236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 161 - 227
Target Start/End: Original strand, 35368614 - 35368680
Alignment:
Q  161 attcatttttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcat 227  Q
    |||||| | ||||||| ||||| |||| |||||||||||||||||| |||||||||||||| |||||    
T  35368614 attcatatatgttggtaatttctaaaagaatggaatcactttagaatcaaaagttgtaacttttcat 35368680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 22251766 - 22251713
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||| |||||||||||||||||||   ||||||||||||||    
T  22251766 atgacggcttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 22251713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 24190296 - 24190349
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||| |||||||||||||||||||   ||||||||||||||    
T  24190296 atgacggcttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 24190349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 389 - 479
Target Start/End: Complemental strand, 22184420 - 22184332
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatca-aaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaa 479  Q
    ||||||||||| |||||||||    ||||||||||||||||| ||| |||||||||||||| |||| |  ||| |||||||||||||||||||    
T  22184420 aaggctcacaattaacaaaaa----gtcctagacttgcatcacaaacgatacaagagaagaacacacatggaagacgactcaaaaccctaaaa 22184332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 25105170 - 25105117
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||| |||||||||||| |||||||||||||||||||   ||||||||||||||    
T  25105170 atgatggcttgaatgaaaaattaggtcttgaagtcttccttatatactgaagca 25105117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 25164263 - 25164210
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||| |||||||||||| |||||||||||||||||||   ||||||||||||||    
T  25164263 atgatggcttgaatgaaaaattaggtcttgaagtcttccttatatactgaagca 25164210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 389 - 580
Target Start/End: Complemental strand, 13941827 - 13941643
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatca-aaatgatacaagagaagacacataaagaacacgactcaaaaccctaaaagttattct 487  Q
    ||||||||||| |||||||    ||||| ||||||||||||| ||| |||||||||||||| ||| |     |||||| ||||||||||||| | |||||    
T  13941827 aaggctcacaattaacaaa----cagtcatagacttgcatcacaaacgatacaagagaaga-acaca-----cacgacgcaaaaccctaaaact-attct 13941739  T
Q  488 tttg---atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    |||    ||||||||||||||   ||||||||||||||||||||   | ||||| |||||||||||  |||| ||  |||||||| ||||| ||||    
T  13941738 tttataaatgacggcttgaatacctaattaggtcttgaagtcttccttttatacggaagcaatatgagctaattaaccttgttgggcttcagaaca 13941643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 510 - 550
Target Start/End: Complemental strand, 22130555 - 22130515
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatg 550  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  22130555 aattagatcttgtagtcttgtatatatactgaagcaatatg 22130515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 492 - 548
Target Start/End: Original strand, 24117977 - 24118033
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaata 548  Q
    |||||||||||||||  | ||||||||||| | |||||||||||||| |||||||||    
T  24117977 atgacggcttgaatgcttgattaggtcttgcattcttgtatatataccgaagcaata 24118033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 543
Target Start/End: Complemental strand, 23420281 - 23420230
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaag 543  Q
    ||||||||||||||||  ||||||||||||||||||| | || |||||||||    
T  23420281 atgacggcttgaatgagcaattaggtcttgaagtcttttttacatactgaag 23420230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 272 - 374
Target Start/End: Complemental strand, 17661731 - 17661633
Alignment:
Q  272 tgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaa 371  Q
    ||||||||||||||||||| |   | ||||| |||  |||||| |||||||||    ||| |||| |||||||||| |||||||||||||||  ||||||    
T  17661731 tgaaattctagcgcgttagcttttaaatgttttatatgatgtttcaacaccag----acacaaaatggatgttgagattaatgtttaaacattgtgctaa 17661636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 22404487 - 22404434
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||||||||| |  |||||||||||||||||||   ||||||||||||||    
T  22404487 atgacggcttgaataatcaattaggtcttgaagtcttccttatatactgaagca 22404434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 23757981 - 23757928
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||| ||||||||||  |||||||||||| |||||| | ||||||||||||||    
T  23757981 atgacagcttgaatgatcaattaggtcttgtagtcttctttatatactgaagca 23757928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 23823437 - 23823384
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||| ||||||||||  |||||||||||| |||||| | ||||||||||||||    
T  23823437 atgacagcttgaatgatcaattaggtcttgtagtcttctttatatactgaagca 23823384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 1e-43; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 35091319 - 35091221
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  35091319 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 35091221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 35096431 - 35096334
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  35096431 tgttggtgatttccaaaataatggaatcactttagaacaaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 35096334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 32429034 - 32429129
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttatt 265  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| || |||||||| | |||||||||||||||||||||    
T  32429034 tgttggtgatttccaaaataatggaatcactttagaaccaagagttgtaactcttcatggaaatcattcatatacattggaacattattatttatt 32429129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 169 - 265
Target Start/End: Original strand, 3424113 - 3424208
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttatt 265  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||||||||||    
T  3424113 ttgtttgtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgagaacca-tcatatacattggaacattattatttatt 3424208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 393 - 551
Target Start/End: Original strand, 32861982 - 32862140
Alignment:
Q  393 ctcacaaataacaaaaacacagtcctagacttgcatcaaaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagttattcttttg 491  Q
    |||||||||||||||    ||||||||| ||| |||||||| |||||||||||||| |||| ||||||||| ||||||||||||||||  |||||||||     
T  32861982 ctcacaaataacaaa----cagtcctaggcttacatcaaaacgatacaagagaagaacacacaaagaacacaactcaaaaccctaaaaactattcttttt 32862077  T
Q  492 ---atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatgg 551  Q
       ||||||||||||||||| |||||||||||||||||||   ||||| ||||||||||||||    
T  32862078 gaaatgacggcttgaatgaacaattaggtcttgaagtcttccttatatcctgaagcaatatgg 32862140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 169 - 241
Target Start/End: Original strand, 34279253 - 34279325
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcata 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||| ||||||||    
T  34279253 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagtttcaattcttcatgggaatcattcata 34279325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 47071818 - 47071758
Alignment:
Q  166 tttttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47071818 tttttgttggtgatttccaaaataatggaatcactttacaaccaaaagttgtaactcttca 47071758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 169 - 227
Target Start/End: Complemental strand, 22119131 - 22119073
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcat 227  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22119131 ttgttggtgattttcaaaataatggaatcactttagaaccaaaagttgtaactcttcat 22119073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 493 - 549
Target Start/End: Original strand, 33746354 - 33746410
Alignment:
Q  493 tgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatat 549  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  33746354 tgacggcttgaatgaataattaggtcttgaagtcttgaatatatactgaagcaatat 33746410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 417 - 559
Target Start/End: Original strand, 41785791 - 41785936
Alignment:
Q  417 ctagacttgcatcaaaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagt-tattcttttga-tgacggcttgaatgaataatt 513  Q
    ||||||||||||||||| |||| ||||||||| |||| ||||||||||||| ||||||||||||   |||||||| || |||| |||| |||   |||||    
T  41785791 ctagacttgcatcaaaacgatataagagaagaacacacaaagaacacgacttaaaaccctaaaaaactattctttagaatgacagcttcaatacctaatt 41785890  T
Q  514 aggtcttgaagtcttgtatatatactgaagcaatatggactaaata 559  Q
    |||||||||||||||   ||||| ||||||||| |||| |||||||    
T  41785891 aggtcttgaagtcttccttatattctgaagcaacatgggctaaata 41785936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 14643526 - 14643582
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  14643526 tgttggtgatttacaaaataattgaatcactttagaaccaaaagttgtaactcttca 14643582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 295 - 375
Target Start/End: Original strand, 41785293 - 41785373
Alignment:
Q  295 aagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaacaaa 375  Q
    |||||||||||||||||||| |||||||| | |||||||||| |||||||| ||| ||||||  |||||||||||||||||    
T  41785293 aagatgttctatgcgatgtttcaacaccaagcacacagaaaatggatgttgcgttcaatgttccaacatcatgctaacaaa 41785373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 407 - 551
Target Start/End: Complemental strand, 15687520 - 15687376
Alignment:
Q  407 aaacacagtcctagacttgcatcaaaatgatacaagagaagacacataaagaacacgactcaaaaccctaaaagtt--attcttttgatgacggcttgaa 504  Q
    |||||||||||||  | |||||||| |||||||| || ||||| || ||| |||| |||||||||||||||| | |  ||||||   |||||||||||||    
T  15687520 aaacacagtcctaagcatgcatcaagatgatacacga-aagactcacaaataaca-gactcaaaaccctaaatgatctattcttcaaatgacggcttgaa 15687423  T
Q  505 tgaataattaggtcttgaagtcttgtatatatactgaagcaatatgg 551  Q
    |||  |||||||||||| |||||||| || |||||||||||||||||    
T  15687422 tgatgaattaggtcttgcagtcttgtttagatactgaagcaatatgg 15687376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 3409329 - 3409383
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactctt 224  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  3409329 tgttggtgatttccaaaataatggaatcactttagaactaaaagttgttactctt 3409383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 54858987 - 54859060
Alignment:
Q  179 tttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaac 252  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||||||| |||| |||||||| | ||||||||    
T  54858987 tttccaaaataatagaatcactttacaaccaaaaattgtaactcttcattggaatcattcatatacattggaac 54859060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 170 - 228
Target Start/End: Original strand, 25618050 - 25618108
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatg 228  Q
    |||||||||||||||||||| ||||||||||||||||| || |||||||||| ||||||    
T  25618050 tgttggtgatttccaaaatattggaatcactttagaactaagagttgtaactgttcatg 25618108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 18716907 - 18716850
Alignment:
Q  206 accaaaagttgtaactcttcatgggaaccattcatacatattggaacattattattta 263  Q
    ||||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  18716907 accaagagttgtaactcttcatgggaaccattcatatacattggtacattattattta 18716850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 206 - 263
Target Start/End: Complemental strand, 18737580 - 18737523
Alignment:
Q  206 accaaaagttgtaactcttcatgggaaccattcatacatattggaacattattattta 263  Q
    ||||| |||||||||||||||||||||||||||||| | ||||| |||||||||||||    
T  18737580 accaagagttgtaactcttcatgggaaccattcatatacattggtacattattattta 18737523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 34128120 - 34128205
Alignment:
Q  168 tttgttggtgatttccaaaa-taatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaac 252  Q
    |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||   || ||| | |||||| ||||||||||    
T  34128120 tttgttggtgatttccaaaaattatggaatcattttagaaccaaaagttgtaactctctgtgagaatctttcatatatattggaac 34128205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 34601825 - 34601881
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||    
T  34601825 tgttggtgatttctaaaataatggaatcattttagaactaaaagttgtaacttttca 34601881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 3409393 - 3409444
Alignment:
Q  214 ttgtaactcttcatgggaaccattcatacatattggaacattattatttatt 265  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||||||||    
T  3409393 ttgtaactcttcatgagaaccattcatatacattggaacattattatttatt 3409444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 10191320 - 10191373
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||||||||||||||||||||||||||||||||   |||||| |||||||    
T  10191320 atgacggcttgaatgaataattaggtcttgaagtcttccttatatagtgaagca 10191373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 18601385 - 18601332
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||||||||||||||||||| ||||||||||||   ||||||||||||||    
T  18601385 atgacggcttgaatgaataattagttcttgaagtctttcttatatactgaagca 18601332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 223
Target Start/End: Complemental strand, 18737634 - 18737586
Alignment:
Q  174 ggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactct 223  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  18737634 ggtgatttccaaaataatggaatcagtttagaaccaaaa-ttgtaactct 18737586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 30019638 - 30019692
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||||||||||| ||||||||||||||||||||||| |  ||||||||||||||||    
T  30019638 tgttggtgatttctaaaataatggaatcactttagaatc--aagttgtaactcttca 30019692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 510 - 551
Target Start/End: Original strand, 31971379 - 31971420
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatgg 551  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  31971379 aattaggtcttgtagtcttgtatatatactgaagcaatatgg 31971420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 18716958 - 18716907
Alignment:
Q  174 ggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  18716958 ggtgatttccaaaataatggaatcagtttagaaccaaaa-ctgtaactcttca 18716907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 510 - 550
Target Start/End: Original strand, 33740104 - 33740144
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatg 550  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  33740104 aattaggtcttgaagtcttgaatatatactgaagcaatatg 33740144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 492 - 559
Target Start/End: Original strand, 28019736 - 28019803
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaata 559  Q
    |||||||||||||| || |||||||||||||||||||   |||||||||||||||  ||| |||||||    
T  28019736 atgacggcttgaataaacaattaggtcttgaagtcttccttatatactgaagcaacttgggctaaata 28019803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 580
Target Start/End: Complemental strand, 16655087 - 16654969
Alignment:
Q  463 gactcaaaaccctaaaa-gttattcttttgatgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagt 561  Q
    ||||||||||| ||||| | ||||  ||| ||||||||||||||||| ||||| ||||||||||| |  ||||||| |||||||| | || |||   |||    
T  16655087 gactcaaaaccataaaaagctatttctttaatgacggcttgaatgaagaattaagtcttgaagtcctcaatatatattgaagcaacacgggctattaagt 16654988  T
Q  562 cttgttggccttcaaaaca 580  Q
    |||||||| ||||| ||||    
T  16654987 cttgttgggcttcagaaca 16654969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 575
Target Start/End: Original strand, 9069398 - 9069463
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttca 575  Q
    ||||||||||||||||||||| |||||| ||||| |||| ||   ||||||||||||||| |||||    
T  9069398 aattaggtcttgaagtcttgtttatatattgaagtaatacggttcaaatagtcttgttgggcttca 9069463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 531 - 580
Target Start/End: Complemental strand, 10197928 - 10197879
Alignment:
Q  531 atatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    |||||||||||||||||| || ||||||||||||||||| ||||| ||||    
T  10197928 atatatactgaagcaatacgggctaaatagtcttgttgggcttcagaaca 10197879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 275 - 372
Target Start/End: Complemental strand, 16655656 - 16655560
Alignment:
Q  275 aattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaac 372  Q
    ||||||||| |||||| |  ||||| |||||||||||||||||||| |||  ||||| || | | |||| ||||||||||||| |||||| |||||||    
T  16655656 aattctagcacgttagctttaagattttctatgcgatgttccaacatcagacacaca-aataagaatgtagagtttaatgtttcaacatcgtgctaac 16655560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 490
Target Start/End: Original strand, 21478457 - 21478538
Alignment:
Q  411 acagtcctagacttgcatca-aaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagttattctttt 490  Q
    |||||| ||||||||||||| ||| |||||||||||||| |||| |  ||| |||||||||||||||||||  |||||||||    
T  21478457 acagtcatagacttgcatcacaaacgatacaagagaagaacacacatggaagacgactcaaaaccctaaaaactattctttt 21478538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 221 - 265
Target Start/End: Complemental strand, 18671242 - 18671198
Alignment:
Q  221 tcttcatgggaaccattcatacatattggaacattattatttatt 265  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||    
T  18671242 tcttcatgggaaccattcatatacattggtacattattatttatt 18671198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 295 - 375
Target Start/End: Original strand, 32861520 - 32861600
Alignment:
Q  295 aagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaacaaa 375  Q
    |||||||||||||  |||||||||||||  | ||| |||| || |||||||  |||||||||| |||||||||| ||||||    
T  32861520 aagatgttctatgtaatgttccaacaccgagcacaaagaatacagatgttgtatttaatgtttcaacatcatgcaaacaaa 32861600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 335 - 374
Target Start/End: Original strand, 2679746 - 2679785
Alignment:
Q  335 aacggatgttgagtttaatgtttaaacatcatgctaacaa 374  Q
    |||| |||||||| ||||||||||||||||||||||||||    
T  2679746 aacgtatgttgagattaatgtttaaacatcatgctaacaa 2679785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 500 - 546
Target Start/End: Complemental strand, 23399914 - 23399868
Alignment:
Q  500 ttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaa 546  Q
    ||||||||| |||||||||||||||||||   |||||||||||||||    
T  23399914 ttgaatgaacaattaggtcttgaagtcttccttatatactgaagcaa 23399868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 25117289 - 25117342
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||| ||||||||| || |||||||||||||||||||   ||||||||||||||    
T  25117289 atgatggcttgaattaacaattaggtcttgaagtcttccttatatactgaagca 25117342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 1e-43; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 28574701 - 28574603
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  28574701 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 28574603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 169 - 267
Target Start/End: Complemental strand, 28598713 - 28598615
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  28598713 ttgttggtgatttccaaaataatggaatcaatttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 28598615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 170 - 265
Target Start/End: Complemental strand, 43359205 - 43359110
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttatt 265  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||||||| | |||||||||||||||||||||    
T  43359205 tgttggtgatttccaaaataatggaatcactttagaaccaagagttgtaactcttcatgagaatcattcatatacattggaacattattatttatt 43359110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 3468471 - 3468374
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||| ||||||||||||| | |||||||||||||||||||||||    
T  3468471 tgttggtgatttccaaaataatggaatcattttagaatcaaaagttgtaattcttcataggaaccattcatatacattggaacattattatttattat 3468374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 271 - 364
Target Start/End: Complemental strand, 17379943 - 17379851
Alignment:
Q  271 ttgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatc 364  Q
    ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||  ||||| |||||| |||||||||||||||||||||||||    
T  17379943 ttgaaattctagcacgttagttttaagatgttctatgcgatgttccaacaccagacacaca-aaaacgaatgttgagtttaatgtttaaacatc 17379851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 167 - 241
Target Start/End: Complemental strand, 16051591 - 16051517
Alignment:
Q  167 ttttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcata 241  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  16051591 ttttgttggtgatttctaaaataatggaatcactttagaaccaaaagttataactctttatgggaatcattcata 16051517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 492 - 580
Target Start/End: Complemental strand, 51471811 - 51471723
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||||| ||| |||| ||||||||||||| ||| ||||| ||||    
T  51471811 atgacggcttgaatgaataattaggtcttgaagtcctcaatatatactgaatcaacatgggctaaatagtcttgatggacttcataaca 51471723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 493 - 548
Target Start/End: Original strand, 12753497 - 12753552
Alignment:
Q  493 tgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaata 548  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  12753497 tgacggcttgaatgaataattaggtcttgaagtcttgaatatatactgaagcaata 12753552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 17356151 - 17356057
Alignment:
Q  271 ttgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcat 366  Q
    ||||||||||||| | ||||||  |||||||| |||||||||||||||||||||  ||||| |||||  |||||||||||||||||||||||||||    
T  17356151 ttgaaattctagcacattagttttaagatgttttatgcgatgttccaacaccagacacaca-aaaacaaatgttgagtttaatgtttaaacatcat 17356057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 171 - 226
Target Start/End: Original strand, 17414304 - 17414359
Alignment:
Q  171 gttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17414304 gttggtgatttccaaaataatggaatcactttagaaccaaaacttgtaactcttca 17414359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 13654730 - 13654676
Alignment:
Q  172 ttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13654730 ttggtaatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 13654676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 35653036 - 35653090
Alignment:
Q  172 ttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35653036 ttggtgatttccaaaataatggaatcactttggaaccaaaagttgtaactcttca 35653090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 1188389 - 1188333
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  1188389 tgttggtgatttccaaaataatggaatcactttagaaccaaaaattgtaacttttca 1188333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 19311230 - 19311180
Alignment:
Q  176 tgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19311230 tgatttccaaaataatggaatcactttataaccaaaagttgtaactcttca 19311180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 3701293 - 3701358
Alignment:
Q  198 actttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattattta 263  Q
    ||||||||||||||||||||||||||| || ||||||||||||| | ||| |||||||||||||||    
T  3701293 actttagaaccaaaagttgtaactctttataggaaccattcatatacattagaacattattattta 3701358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 494 - 575
Target Start/End: Original strand, 8282364 - 8282445
Alignment:
Q  494 gacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttca 575  Q
    |||||||||||| |  |||||||||||| ||||||||||| ||||||||||||||   |||||||||||||||||| |||||    
T  8282364 gacggcttgaataatgaattaggtcttgcagtcttgtatacatactgaagcaatacatactaaatagtcttgttgggcttca 8282445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 411 - 548
Target Start/End: Complemental strand, 25350011 - 25349871
Alignment:
Q  411 acagtcctagacttgcatcaaaatgatacaagagaagacacataaagaacacgactcaaaaccctaaaagttattctttt---gatgacggcttgaatga 507  Q
    ||||| ||| |||| |||||| | |||||||||| ||||||| |||||| |||||||||||||||||||  || ||||||    |||| |||||||||      
T  25350011 acagtactaaacttacatcaacacgatacaagagtagacacacaaagaaaacgactcaaaaccctaaaaactaatctttttagaatgatggcttgaatac 25349912  T
Q  508 ataattaggtcttgaagtcttgtatatatactgaagcaata 548  Q
     | ||||||||||||||||||   | |||||||||||||||    
T  25349911 ctgattaggtcttgaagtcttccttttatactgaagcaata 25349871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 226
Target Start/End: Complemental strand, 10186101 - 10186056
Alignment:
Q  181 tccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  10186101 tccaaaataatggaatcactttagaatcaaaagttgtaactcttca 10186056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 271 - 368
Target Start/End: Complemental strand, 51472413 - 51472317
Alignment:
Q  271 ttgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgc 368  Q
    ||||||||| ||| ||||||||  |||| |||||||||||||||||||||||||  ||||| || ||| |||||||| ||||||| | ||||||||||    
T  51472413 ttgaaattccagcacgttagttctaagacgttctatgcgatgttccaacaccagacacaca-aatacgaatgttgagcttaatgtctcaacatcatgc 51472317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 1188221 - 1188178
Alignment:
Q  183 caaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  1188221 caaaataatggaatcactttagaaccaaaagttgtaacttttca 1188178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 224
Target Start/End: Original strand, 3696111 - 3696165
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactctt 224  Q
    ||||||| ||||| ||||||||||||||||||| ||| |||||||||||||||||    
T  3696111 tgttggtaatttctaaaataatggaatcactttggaatcaaaagttgtaactctt 3696165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 549
Target Start/End: Complemental strand, 10339967 - 10339825
Alignment:
Q  411 acagtcctagacttgcatca-aaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagt-tattcttttga-tgacggcttgaatg 506  Q
    ||||||||||||||| |||| ||| |||||||||||||| |||| |||| | |||||||||||||||||||   |||||||| || || ||| ||||||     
T  10339967 acagtcctagacttggatcacaaacgatacaagagaagaacacacaaaggaaacgactcaaaaccctaaaaaactattctttagaatggcggattgaata 10339868  T
Q  507 aataattaggtcttgaagtcttgtatatatactgaagcaatat 549  Q
      ||||||||||||||| | ||   ||||||||||||||||||    
T  10339867 cctaattaggtcttgaaattttccttatatactgaagcaatat 10339825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 405 - 580
Target Start/End: Original strand, 1625926 - 1626097
Alignment:
Q  405 aaaaacacagtcctagacttgcatcaaaatgatacaagagaagacacataaagaacacgactcaaaaccctaaaagttattcttttg---atgacggctt 501  Q
    ||||| ||||| ||| ||||||||||| | |||||||||| ||||||| |||||      ||||||||||||||| | |  |||||    ||||||||||    
T  1625926 aaaaaaacagtactaaacttgcatcaacacgatacaagagtagacacacaaaga------ctcaaaaccctaaaact-agacttttagaaatgacggctt 1626018  T
Q  502 gaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    |||| |  |||||||||||||||| ||   | |||||||||||||||||| |||||||  |||||||| ||||| ||||    
T  1626019 gaataatcaattaggtcttgaagttttccttttatactgaagcaatatgggctaaataaccttgttgggcttcataaca 1626097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 496 - 545
Target Start/End: Original strand, 4246475 - 4246524
Alignment:
Q  496 cggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||||||    
T  4246475 cggcttgaatgaacaattaggtcttgaagtcttctttatatactgaagca 4246524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 10186307 - 10186359
Alignment:
Q  174 ggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    |||| |||||||||||||||||||||||||||  |||||||| ||||||||||    
T  10186307 ggtgctttccaaaataatggaatcactttagactcaaaagttttaactcttca 10186359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 21430776 - 21430833
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcat 227  Q
    ||||||||||||| ||||||||| |||||| ||||| | ||||||||||||||||||||    
T  21430776 ttgttggtgattttcaaaataatagaatcattttag-atcaaaagttgtaactcttcat 21430833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 17414359 - 17414416
Alignment:
Q  206 accaaaagttgtaactcttcatgggaaccattcatacatattggaacattattattta 263  Q
    ||||||||||||||||||||||  ||| |||||||| | ||| |||||||||||||||    
T  17414359 accaaaagttgtaactcttcattagaatcattcatatacattagaacattattattta 17414416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 223
Target Start/End: Complemental strand, 35626591 - 35626539
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactct 223  Q
    ||||||||||||| ||||||||||||||||||||| | ||||| ||||||||||    
T  35626591 tgttggtgatttctaaaataatggaatcactttag-atcaaaaattgtaactct 35626539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 492 - 556
Target Start/End: Complemental strand, 17851100 - 17851036
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaa 556  Q
    |||||||||||||| |  |||||||||||||||||||   |||||||||||| ||||||| ||||    
T  17851100 atgacggcttgaataatcaattaggtcttgaagtcttccttatatactgaagaaatatgggctaa 17851036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 588 - 687
Target Start/End: Original strand, 19819153 - 19819253
Alignment:
Q  588 agtgaatcgattcagactacttatgatacaattcactagaacacatagaccacaatgcaaattt-gaaaacttgttaacaccatttatgacacacatgat 686  Q
    |||||||||||||||||||||  |||||  |||||  |||||||| | ||| || ||  ||||| |||||||| |||||||||||| ||| |||||||||    
T  19819153 agtgaatcgattcagactactagtgatatgattcataagaacacagaaacctcagtgtgaattttgaaaacttattaacaccatttgtgagacacatgat 19819252  T
Q  687 g 687  Q
    |    
T  19819253 g 19819253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 309 - 372
Target Start/End: Original strand, 8281796 - 8281858
Alignment:
Q  309 gatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaac 372  Q
    ||||||||||||||||  ||||| || | | ||||||||||||||||||||||||| |||||||    
T  8281796 gatgttccaacaccagacacaca-aatatgaatgttgagtttaatgtttaaacatcgtgctaac 8281858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 559
Target Start/End: Original strand, 13165828 - 13165895
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaata 559  Q
    |||||| |||||||||| ||||| |||||||||||||   |||||||||||||||  ||| |||||||    
T  13165828 atgacgacttgaatgaacaattatgtcttgaagtcttccttatatactgaagcaacttgggctaaata 13165895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 546
Target Start/End: Complemental strand, 17355527 - 17355492
Alignment:
Q  511 attaggtcttgaagtcttgtatatatactgaagcaa 546  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17355527 attaggtcttgaagtcttgaatatatactgaagcaa 17355492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 546
Target Start/End: Complemental strand, 17379319 - 17379284
Alignment:
Q  511 attaggtcttgaagtcttgtatatatactgaagcaa 546  Q
    ||||||||||||||||||| ||||||||||||||||    
T  17379319 attaggtcttgaagtcttgaatatatactgaagcaa 17379284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 411 - 479
Target Start/End: Complemental strand, 47941151 - 47941081
Alignment:
Q  411 acagtcctagacttgcatca-aaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaa 479  Q
    |||||| ||||||||||||| ||| |||||||||||||| |||| |  ||| |||||||||||||||||||    
T  47941151 acagtcatagacttgcatcacaaacgatacaagagaagaacacacatggaagacgactcaaaaccctaaaa 47941081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 20200811 - 20200758
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||  ||||| |||||||||||||   ||||||||||||||    
T  20200811 atgacggcttgaatgatcaattatgtcttgaagtcttcgttatatactgaagca 20200758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 336
Target Start/End: Original strand, 33062244 - 33062285
Alignment:
Q  295 aagatgttctatgcgatgttccaacaccaggtacacagaaaa 336  Q
    ||||||||||| |||||||||||||||||  |||||||||||    
T  33062244 aagatgttctacgcgatgttccaacaccaattacacagaaaa 33062285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 4e-43; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 14917183 - 14917280
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  14917183 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 14917280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 168 - 267
Target Start/End: Original strand, 17719998 - 17720097
Alignment:
Q  168 tttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||    
T  17719998 tttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaactattcatatacattggaacattattatttattat 17720097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 169 - 267
Target Start/End: Original strand, 17720326 - 17720424
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  17720326 ttgttggtgatttccaaaataatagaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 17720424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 39179002 - 39178905
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  39179002 tgttggtgatttccaaaataatggaatcactttagaactaaaagttgtaactcttcatgggaaccattcatatacattggaacattattatttattat 39178905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 170 - 267
Target Start/End: Original strand, 30283251 - 30283348
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||    
T  30283251 tgttggtgatttccaaaataatggaatcattttagaaccaaaagttgtaactcttcatgggaaccattcatgtacattggaacattattatttattat 30283348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 170 - 267
Target Start/End: Complemental strand, 45120790 - 45120693
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttattat 267  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||||    
T  45120790 tgttggtgatttccaaaataatggaatcactttagaattaaaagttgtaactcttcatgggaaccattcatatacattgaaacattattatttattat 45120693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 389 - 491
Target Start/End: Complemental strand, 21250026 - 21249926
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatcaaaatgatacaagagaag-acacataaagaacacgactcaaaaccct-aaaagttattc 486  Q
    ||||||||||||||||||| |    |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||| |||| ||||||    
T  21250026 aaggctcacaaataacaaaga----gtcctagacttgcatcaaaatgatacaagagaagaacacacaaagaagacgactcaaaaccctgaaaaattattc 21249931  T
Q  487 ttttg 491  Q
    |||||    
T  21249930 ttttg 21249926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 42780597 - 42780542
Alignment:
Q  169 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactctt 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42780597 ttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgttactctt 42780542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 36398608 - 36398522
Alignment:
Q  406 aaaacacagtcctagacttgcatca-aaatgatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagttattctttt 490  Q
    |||| |||||||||||||||||||| ||| |||||||||||||| |||| |  ||| |||||||||||||||||||  |||||||||    
T  36398608 aaaaaacagtcctagacttgcatcacaaacgatacaagagaagaacacacatggaagacgactcaaaaccctaaaaactattctttt 36398522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 24789885 - 24789832
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||||||| |||||||||||||||||||   ||||||||||||||    
T  24789885 atgacggcttgaatgaacaattaggtcttgaagtcttacttatatactgaagca 24789832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 270 - 346
Target Start/End: Complemental strand, 13315291 - 13315215
Alignment:
Q  270 attgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttga 346  Q
    ||||||||||| || ||||||    ||||||||||| |||||||||||||| ||| ||||||||| |||||||||||    
T  13315291 attgaaattctggcacgttagacttaagatgttctacgcgatgttccaacatcagttacacagaacacggatgttga 13315215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 295 - 375
Target Start/End: Complemental strand, 21250498 - 21250418
Alignment:
Q  295 aagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaacaaa 375  Q
    ||||||||||||| ||| |||||||||||   |||||||||||  |||||| ||||||||||  |||||||||| ||||||    
T  21250498 aagatgttctatgagatattccaacaccaaccacacagaaaactaatgttgtgtttaatgttccaacatcatgcaaacaaa 21250418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 374
Target Start/End: Original strand, 27106713 - 27106814
Alignment:
Q  271 ttgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgcta 370  Q
    |||||||||||| | ||||| |   |||||||||||||||||||||||||| ||  | ||| || ||| ||||||| ||||||||||||||||  |||||    
T  27106713 ttgaaattctagagtgttagctttcagatgttctatgcgatgttccaacactag--aaacaaaagacgaatgttgaatttaatgtttaaacattgtgcta 27106810  T
Q  371 acaa 374  Q
    ||||    
T  27106811 acaa 27106814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 492 - 580
Target Start/End: Original strand, 31587917 - 31588005
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttcaaaaca 580  Q
    |||||||||| ||| |  || ||||||||| ||||||||||||||||||||||||||    |||||||||| |||||| ||||| ||||    
T  31587917 atgacggcttcaattatgaaataggtcttgcagtcttgtatatatactgaagcaatacatgctaaatagtcatgttgggcttcagaaca 31588005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 29565848 - 29565914
Alignment:
Q  270 attgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccaggtacacagaaaa 336  Q
    |||||||||||||| ||||||    |||||||| || |||||||||||||||||| |||||||||||    
T  29565848 attgaaattctagcacgttagacttaagatgttttacgcgatgttccaacaccagttacacagaaaa 29565914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 298 - 370
Target Start/End: Complemental strand, 19198576 - 19198506
Alignment:
Q  298 atgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgcta 370  Q
    ||||| ||| |||||||||||||||||  ||||| || | | ||||||||||||||||||||||||| |||||    
T  19198576 atgttttatacgatgttccaacaccag--acacaaaagaagaatgttgagtttaatgtttaaacatcgtgcta 19198506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 255
Target Start/End: Original strand, 20892154 - 20892203
Alignment:
Q  206 accaaaagttgtaactcttcatgggaaccattcatacatattggaacatt 255  Q
    ||||| ||||||||||||||||| |||||||||||| | |||||||||||    
T  20892154 accaagagttgtaactcttcatgagaaccattcatatacattggaacatt 20892203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 22611324 - 22611377
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||||||||| ||| |||||||||||||||||||   ||||||||||||||    
T  22611324 atgacggcttgaaggaacaattaggtcttgaagtcttccttatatactgaagca 22611377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 218
Target Start/End: Original strand, 20892110 - 20892146
Alignment:
Q  182 ccaaaataatggaatcactttagaaccaaaagttgta 218  Q
    |||||||||||||||||||||| ||||||||||||||    
T  20892110 ccaaaataatggaatcactttaaaaccaaaagttgta 20892146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 23802115 - 23802063
Alignment:
Q  272 tgaaattctagcgcgttagttagaagatgttctatgcgatgttccaacaccag 324  Q
    |||||||||||| ||||||||  |||||||| | |||||||||||||||||||    
T  23802115 tgaaattctagcacgttagttttaagatgttttgtgcgatgttccaacaccag 23802063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 559
Target Start/End: Original strand, 12910926 - 12910993
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaata 559  Q
    |||||||||||||| || |||||||||||||| ||||   |||||||||||||| | ||| |||||||    
T  12910926 atgacggcttgaataaacaattaggtcttgaaatcttccttatatactgaagcagtttgggctaaata 12910993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 22582284 - 22582351
Alignment:
Q  308 cgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgctaacaaa 375  Q
    |||||||||||||||||   |||||||||| ||||||| ||||||||||  || |||||||| |||||    
T  22582284 cgatgttccaacaccagaaccacagaaaacagatgttgcgtttaatgttccaatatcatgctcacaaa 22582351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 296 - 373
Target Start/End: Original strand, 31587334 - 31587410
Alignment:
Q  296 agatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgttta-aacatcatgctaaca 373  Q
    |||||||||||| ||||||||||||||||  | ||| || ||| ||||||| | ||||||||| |||||||||||||||    
T  31587334 agatgttctatgtgatgttccaacaccag--atacaaaatacgaatgttgaatgtaatgtttagaacatcatgctaaca 31587410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 84
Target Start/End: Complemental strand, 678364 - 678331
Alignment:
Q  51 aacttaattctttattttaaagtggtcacataac 84  Q
    |||||||||||||||||||||||||||| |||||    
T  678364 aacttaattctttattttaaagtggtcatataac 678331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 510 - 575
Target Start/End: Original strand, 21530834 - 21530899
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatggactaaatagtcttgttggccttca 575  Q
    |||||||||||||||||||   | |||||||||| |||||||   ||||||||||||||| |||||    
T  21530834 aattaggtcttgaagtcttccttttatactgaagaaatatgggtcaaatagtcttgttgggcttca 21530899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 82; Significance: 3e-38; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 166 - 267
Target Start/End: Original strand, 1816 - 1917
Alignment:
Q  166 tttttgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttcatgggaaccattcatacatattggaacattattatttatt 265  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||| ||||||||    
T  1816 tttttgttggtgattttcaaaataatggaatcactttagaaccaaaagttgtatctcttcatgggaaccattcatatacattggaacattactatttatt 1915  T
Q  266 at 267  Q
    ||    
T  1916 at 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 51; Significance: 8e-20; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 172 - 226
Target Start/End: Complemental strand, 144491 - 144437
Alignment:
Q  172 ttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  144491 ttggtaatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 144437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 170 - 226
Target Start/End: Complemental strand, 173766 - 173710
Alignment:
Q  170 tgttggtgatttccaaaataatggaatcactttagaaccaaaagttgtaactcttca 226  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  173766 tgttggtgatttacaaaataattgaatcactttagaaccaaaagttgtaactcttca 173710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 463 - 545
Target Start/End: Complemental strand, 9786 - 9701
Alignment:
Q  463 gactcaaaaccctaaaa--gttattcttttg-atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||||||||||||    |||||||| | |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  9786 gactcaaaaccctaaaaacactattctttagaatgacggcttgaatgaataattaggtcttctagtcttgtatatatactgaagca 9701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 295 - 368
Target Start/End: Original strand, 34988 - 35061
Alignment:
Q  295 aagatgttctatgcgatgttccaacaccaggtacacagaaaacggatgttgagtttaatgtttaaacatcatgc 368  Q
    ||||||||||||| |||||| |||||||    ||||||||||||||||||||| ||||||||| ||||| ||||    
T  34988 aagatgttctatgtgatgtttcaacaccgtacacacagaaaacggatgttgagattaatgtttcaacattatgc 35061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 389 - 448
Target Start/End: Original strand, 37697 - 37752
Alignment:
Q  389 aaggctcacaaataacaaaaacacagtcctagacttgcatcaaaatgatacaagagaaga 448  Q
    ||||||||||| |||||||    |||||||||||||||||||| | ||||||||||||||    
T  37697 aaggctcacaattaacaaa----cagtcctagacttgcatcaacacgatacaagagaaga 37752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 492 - 559
Target Start/End: Original strand, 159505 - 159572
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaata 559  Q
    ||||||||||||||| | ||||||||||||||||||| | ||| |||||||||||  ||| |||||||    
T  159505 atgacggcttgaatggacaattaggtcttgaagtcttctttatgtactgaagcaacttgggctaaata 159572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 548
Target Start/End: Original strand, 417 - 455
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaata 548  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  417 aattaggtcttgaagtcttgaatatatactgaagcaata 455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 25403 - 25350
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||| |||||||||| |||||||||||||||||||   ||||||||||||||    
T  25403 atgacgacttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 25350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Original strand, 6342 - 6395
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    |||||||||| |||||  ||||||||||||||||||||| | ||||||||||||    
T  6342 atgacggcttaaatgagcaattaggtcttgaagtcttgtttttatactgaagca 6395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 492 - 545
Target Start/End: Complemental strand, 109985 - 109932
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagca 545  Q
    ||||||| ||||||||| |||||||||||||||||||   ||||||||||||||    
T  109985 atgacggtttgaatgaacaattaggtcttgaagtcttccttatatactgaagca 109932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 510 - 551
Target Start/End: Complemental strand, 73940 - 73899
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaatatgg 551  Q
    |||||||||||| ||||||||||||||||| |||||||||||    
T  73940 aattaggtcttgtagtcttgtatatatactaaagcaatatgg 73899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 492 - 528
Target Start/End: Original strand, 2353 - 2389
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtctt 528  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2353 atgacggcttgaatgaacaattaggtcttgaagtctt 2389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 559
Target Start/End: Complemental strand, 2093 - 2026
Alignment:
Q  492 atgacggcttgaatgaataattaggtcttgaagtcttgtatatatactgaagcaatatggactaaata 559  Q
    |||||||||||||| |  |||||||||||||||||||   |||||||||||||| | ||| |||||||    
T  2093 atgacggcttgaataatcaattaggtcttgaagtcttccttatatactgaagcagtttgggctaaata 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 340 - 374
Target Start/End: Original strand, 15214 - 15248
Alignment:
Q  340 atgttgagtttaatgtttaaacatcatgctaacaa 374  Q
    ||||||||||||||||||| |||||||||||||||    
T  15214 atgttgagtttaatgtttatacatcatgctaacaa 15248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 548
Target Start/End: Complemental strand, 45632 - 45594
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaata 548  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  45632 aattaggtcttgtagtcttgtatttatactgaagcaata 45594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 510 - 548
Target Start/End: Complemental strand, 52638 - 52600
Alignment:
Q  510 aattaggtcttgaagtcttgtatatatactgaagcaata 548  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  52638 aattaggtcttgtagtcttgtatttatactgaagcaata 52600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 490
Target Start/End: Complemental strand, 16024 - 15943
Alignment:
Q  411 acagtcctagacttgcatcaaaat-gatacaagagaaga-cacataaagaacacgactcaaaaccctaaaagttattctttt 490  Q
    ||||| |||||||||||||| ||  |||||||||||||| |||| |  ||| |||||||||||||||||||  |||||||||    
T  16024 acagttctagacttgcatcacaagcgatacaagagaagaacacacacggaagacgactcaaaaccctaaaaactattctttt 15943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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