View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4474-Insertion-1 (Length: 850)
Name: NF4474-Insertion-1
Description: NF4474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4474-Insertion-1 |
 |  |
|
| [»] scaffold0097 (1 HSPs) |
 |  |  |
|
| [»] scaffold0707 (1 HSPs) |
 |  |  |
|
| [»] scaffold0128 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr1 (Bit Score: 715; Significance: 0; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 715; E-Value: 0
Query Start/End: Original strand, 8 - 810
Target Start/End: Original strand, 39379318 - 39380119
Alignment:
| Q |
8 |
gagtgatcgggtcttcatcttgaatagccaaccagttaagagtgccattaagaaacaaaccagtatgatgaaattgttcaatatcacaataaagaggaac |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
39379318 |
gagtgatcgggtcttcatcttgaatagccaaccaattaagagtgccattaagaaacacaccagtatgatgaaattgttcaacatcacaataaagaggaac |
39379417 |
T |
 |
| Q |
108 |
aaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaactctcacatgggttgtcaattcttcgtcgacgccaaggtaacgtgacgca |
207 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
39379418 |
aaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaactctcacatcggttgtcaattcttcgccgacgccaaggtaacgtgacgca |
39379517 |
T |
 |
| Q |
208 |
accactttaaaagttccagtggaattatcacaaccgaaatcgaagacaaaaatgccagaatcacaaaaacaaccaattttttgagatattttcctagtgg |
307 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
39379518 |
accactttaaaagtttcagtggaattatcacaaccaaaatcgaagacaaaaatgccagaatcacaaaaacaaccaattttttgagatgttttcctagtgg |
39379617 |
T |
 |
| Q |
308 |
ctgggttccataaacggaaccagtactcataacatgaggctaaaccggaaccataagcgtaacgatcaccaactaaacagataaatccattacaggaacc |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
39379618 |
ctgggttccataaacggaaccagtactcataacatgaggctaaaccggaaccataagcgtaacgatcaccaactaaacagaccaatccattacaggaacc |
39379717 |
T |
 |
| Q |
408 |
gactaaacgagaacaatctttttggctcaatagaaagtgaggatcagcaacaagggtaaacgaagggttatcgagtatacgaggtatagggtatggaatg |
507 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39379718 |
gactaaacgagaacaatctttctggctcaatagaaagtgaggatcagcaacaagggtaaacgaagggttatcgagtatacgaggtatagggtatggaatg |
39379817 |
T |
 |
| Q |
508 |
atactcataaacattatcagggtattcagttatgagtgtgaagtgttgtggatttcgtgattttaatttcttgaagtgaaatttgacaaaattgggatcg |
607 |
Q |
| |
|
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39379818 |
atact-gtaatcattatcagggtattcagttatgagtgtgaagtgttgtggatttcgtgattttaatttcttgaagtgaaatttgacaaaattgggatcg |
39379916 |
T |
 |
| Q |
608 |
gaaatgagagttttccaaggattgcttacacatttgaatcgaagtagagattttacaggaagtaatgaaaggatcttggtgagaagatcgtcggagaaga |
707 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| | |
|
|
| T |
39379917 |
gaaatgagagttttccaaggattgcttacacatttgaatcgaagtagagattttacaggaagtaacgaaaggatctcggtgagaagatcgtcggagaaaa |
39380016 |
T |
 |
| Q |
708 |
acaccggcgacggagttgtagtcatcgctgattgttaacgatttccaatgccaatgcaccttcgccggagtgttatattgaaccgttgaaattgtgaaat |
807 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| |
|
|
| T |
39380017 |
acagcggcgacggagttgtagtcatcgctgattgttaacgatttccaatgccaatgcaccttcgccggagtgatatattgaactgttgaaagtgtgaaat |
39380116 |
T |
 |
| Q |
808 |
gag |
810 |
Q |
| |
|
||| |
|
|
| T |
39380117 |
gag |
39380119 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 17561094 - 17561152
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaa |
157 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| |||| |
|
|
| T |
17561094 |
aagaggaacaaccgggaaactttgaatatctctccaaacgttatcacccaaacttaaaa |
17561152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 4017084 - 4017133
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||||| ||| |||| |||| |
|
|
| T |
4017084 |
aaactgtcaatatttctccaaacatcatcacccaaattgagaactttcac |
4017133 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 4366834 - 4366883
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacattatcaccca |
148 |
Q |
| |
|
||||||||||| || ||||||||||||| ||||||||| |||||||||| |
|
|
| T |
4366834 |
aagaggaacaataggaaaactttcaatatctctccaaacgttatcaccca |
4366883 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 142; Significance: 4e-74; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 28 - 512
Target Start/End: Complemental strand, 3565537 - 3565059
Alignment:
| Q |
28 |
tgaatagccaaccagttaagagtgccattaagaaacaaaccagtatgatgaaattgttcaatatcacaataaagaggaacaaccgggaaactttcaatat |
127 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||| | ||||||| |||| || | ||| || |||||||||| |||||||||||||||||| |
|
|
| T |
3565537 |
tgaacagccaaccagttaagagtgccattaagaaacacatcagtatgcccaaatccttgataatccaaacgaagaggaacagccgggaaactttcaatat |
3565438 |
T |
 |
| Q |
128 |
ttctccaaacattatcacccaaactgaaaactctcacatgggttgtcaattcttcgtcgacgccaaggtaacgtgacgcaaccactttaaaagttccagt |
227 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| | | || |||| | || | || |||||||||||||||||||||||||||||| || |
|
|
| T |
3565437 |
ttctccaaacattatcacctaaactgaaaactctcacctcgcttttcaaatgatcatg------aatgtaacgtgacgcaaccactttaaaagttccggt |
3565344 |
T |
 |
| Q |
228 |
ggaattatcacaaccgaaatcgaagacaaaaatgccagaatcacaaaaacaaccaattttttgagatattttcctagtggctgggttccataaacggaac |
327 |
Q |
| |
|
||||||||||||||| ||| |||||| ||| | | ||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
3565343 |
ggaattatcacaaccacaattgaagacgaaactatgaagatcacgaaaacaaccaatttttggagatattttcctagtagctgggttccataaacggagc |
3565244 |
T |
 |
| Q |
328 |
cagtactcataacatgaggctaaaccggaaccataagcgtaacgatcaccaactaaacagataaatccattacaggaaccgactaaacgagaacaatctt |
427 |
Q |
| |
|
||||||||||||||| | | | ||||||||| | |||||| |||| |||||||| || ||||| ||| |||| ||| || ||| || |||| |
|
|
| T |
3565243 |
cagtactcataacattcagtatcagcagaaccataaatgaaacgataaccagtcaaacagatcaacccattgcagaaaccagctataccagagcagtctt |
3565144 |
T |
 |
| Q |
428 |
tttggctcaatagaaagtgaggatcagcaacaagggtaaacgaagggttatcgagtatacgaggtatagggtatggaatgatact |
512 |
Q |
| |
|
||| |||| | | |||||||||||||||||| ||||| || ||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
3565143 |
tttcattcaacatagagtgaggatcagcaacaaccgtaaatgacgggttatcgagtaaacgaggtataggatatggaatgatact |
3565059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 30 - 511
Target Start/End: Complemental strand, 3557517 - 3557042
Alignment:
| Q |
30 |
aatagccaaccagttaagagtgccattaagaaacaaaccagtatgatgaaattgttcaatatcacaataaagaggaacaaccgggaaactttcaatattt |
129 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||| | ||||||| | |||| |||| || ||| |||| | ||||| |||||||||||||||||| |
|
|
| T |
3557517 |
aatagccaaccagttaaaagtgctgttaagaaacacatcagtatgctcaaatccttcataatacaaattaagatggacaacagggaaactttcaatattt |
3557418 |
T |
 |
| Q |
130 |
ctccaaacattatcacccaaactgaaaactctcacatgggttgtcaattcttcgtcgacgccaaggtaacgtgacgcaaccactttaaaagttccagtgg |
229 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || | ||||||| || ||| || ||||||||| ||||||||||||||||| | || | |
|
|
| T |
3557417 |
ctccaaacattatcacctaaactgaaaactctaacctcacttgtcaaacgatc----acg--aatgtaacgtgatgcaaccactttaaaagtgtcggtag |
3557324 |
T |
 |
| Q |
230 |
aattatcacaaccgaaatcgaagacaaaaatgccagaatcacaaaaacaaccaattttttgagatattttcctagtggctgggttccataaacggaacca |
329 |
Q |
| |
|
||| ||||||||| |||| |||||| ||| | ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
3557323 |
aatcatcacaaccaaaattgaagacgaaaccaggaagatcacgaaaacaaccaatttttggagatattttcctagtggctgggttccataaacgtagcca |
3557224 |
T |
 |
| Q |
330 |
gtactcataacatgaggctaaaccggaaccataagcgtaacgatcaccaactaaacagataaatccattacaggaaccgactaaacgagaacaatctttt |
429 |
Q |
| |
|
||| ||||| || | | |||| | |||| | |||||| |||| ||||| || || ||||| |||||||| ||| || ||| || |||||| |
|
|
| T |
3557223 |
gtagtcatataattcatcatcatcggaccaataaatggaacgataaccagtcaaacaaatcaacccattgcaggaacctgctataccagagcagtctttt |
3557124 |
T |
 |
| Q |
430 |
tggctcaatagaaagtgaggatcagcaacaagggtaaacgaagggttatcgagtatacgaggtatagggtatggaatgatac |
511 |
Q |
| |
|
| |||||||| || ||||||||| | ||||||||| || ||||||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
3557123 |
tcattcaatagagagcgaggatcagtgataagggtaaaggacgggttatcgagtaaacggggtatagggtatggaatgatac |
3557042 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 535 - 743
Target Start/End: Complemental strand, 3564992 - 3564787
Alignment:
| Q |
535 |
agttatgagtgtgaagtgttgtggatttcgtgattttaatttcttgaagtgaaatttgacaaaattgggatcggaaatgagagttttccaaggattgctt |
634 |
Q |
| |
|
|||||| |||||||||| ||| |||| |||||||| ||||| ||| || ||||| |||||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
3564992 |
agttattagtgtgaagtattg---attttgtgattttgatttcatgagatggaatttcacaaaattgggatcggaaatgagagtgttccaaggattactt |
3564896 |
T |
 |
| Q |
635 |
acacatttgaatcgaagtagagattttacaggaagtaatgaaaggatcttggtgagaagatcgtcggagaagaacaccggcgacggagttgtagtcatcg |
734 |
Q |
| |
|
||||||||||| ||||| || ||||||||||||||||| || |||||| || ||| ||||| |||||||||||| ||||||| ||| |||| ||| | |
|
|
| T |
3564895 |
acacatttgaaacgaagaagtgattttacaggaagtaacgagaggatcacggcgaggagatcatcggagaagaacgccggcgatggacgagtagacatgg |
3564796 |
T |
 |
| Q |
735 |
ctgattgtt |
743 |
Q |
| |
|
||||||||| |
|
|
| T |
3564795 |
ctgattgtt |
3564787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 100 - 344
Target Start/End: Original strand, 1686634 - 1686872
Alignment:
| Q |
100 |
agaggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaactctcacatgggttgtcaattcttcgtcgacgccaaggtaac |
199 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||| | || ||| | |||| |
|
|
| T |
1686634 |
agaggaataaccgggaaactttcaatatttctccaaacattatcacctaaactgaaaactctcatataacatgtcaaataatc----acg--actttaac |
1686727 |
T |
 |
| Q |
200 |
gtgacgcaaccactttaaaagttccagtggaattatcacaaccgaaatcgaagacaaaaatgccagaatcacaaaaacaaccaattttttgagatatttt |
299 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| |||| ||||| ||| | ||||| |||| | |||||| ||||||||||||| |
|
|
| T |
1686728 |
atgacgcaaccactttaaaagtgccagtggaattatcacaaccaaaattgaagatgaaaccgtttacatcacgaaaagacccaattatttgagatatttt |
1686827 |
T |
 |
| Q |
300 |
cctagtggctgggttccataaacggaaccagtactcataacatga |
344 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||| || |||||||| |
|
|
| T |
1686828 |
cctagtggccgggttccataaacggaaccggtattcgtaacatga |
1686872 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 558 - 743
Target Start/End: Complemental strand, 3556954 - 3556769
Alignment:
| Q |
558 |
gatttcgtgattttaatttcttgaagtgaaatttgacaaaattgggatcggaaatgagagttttccaaggattgcttacacatttgaatcgaagtagaga |
657 |
Q |
| |
|
||||| |||||||| || |||||| || ||||| |||||||||||||| ||||| |||| ||||||| || ||||| ||| | |||||||||||||| |
|
|
| T |
3556954 |
gattttgtgattttgatctcttgagatggaatttcacaaaattgggatcagaaattagagcgttccaagacttacttacgcatctaaatcgaagtagaga |
3556855 |
T |
 |
| Q |
658 |
ttttacaggaagtaatgaaaggatcttggtgagaagatcgtcggagaagaacaccggcgacggagttgtagtcatcgctgattgtt |
743 |
Q |
| |
|
||| |||| ||||||||||||||||| | ||| ||||| |||||||||||||||||||||||| | |||| ||| |||||||||| |
|
|
| T |
3556854 |
tttcacagaaagtaatgaaaggatctcgacgaggagatcatcggagaagaacaccggcgacggaatcgtagacatggctgattgtt |
3556769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 553 - 708
Target Start/End: Original strand, 3573456 - 3573610
Alignment:
| Q |
553 |
ttgtggatttcgtgattttaatttcttgaagtgaaatttgacaaaattgggatcggaaatgagagttttccaaggattgcttacacatttgaatcgaagt |
652 |
Q |
| |
|
|||||||||| |||||||| ||||||||| | ||||| | ||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
3573456 |
ttgtggattttgtgattttgatttcttgagatagaatttcatgaaattgggatcggaaatgagagtgttccaaggattacttacacatttgaaacgaaga |
3573555 |
T |
 |
| Q |
653 |
agagattttacaggaagtaatgaaaggatcttggtgagaagatcgtcggagaagaa |
708 |
Q |
| |
|
|| ||||| ||||||||||||||||||| | | ||||| |||||||| |||||||| |
|
|
| T |
3573556 |
agtgatttcacaggaagtaatgaaaggaac-tagtgaggagatcgtcagagaagaa |
3573610 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 558 - 721
Target Start/End: Original strand, 1687154 - 1687317
Alignment:
| Q |
558 |
gatttcgtgattttaatttcttgaagtgaaatttgacaaaattgggatcggaaatgagagttttccaaggattgcttacacatttgaatcgaagtagaga |
657 |
Q |
| |
|
||||| |||||||| || |||||| || ||||| |||||| |||||| ||||| |||| ||||||| || ||||| ||| |||||||||| ||||| |
|
|
| T |
1687154 |
gattttgtgattttgatctcttgagatggaatttcacaaaaaagggatcagaaattagagcgttccaagacttacttacgcatctgaatcgaaggagaga |
1687253 |
T |
 |
| Q |
658 |
ttttacaggaagtaatgaaaggatcttggtgagaagatcgtcggagaagaacaccggcgacgga |
721 |
Q |
| |
|
||| |||| ||||||||||||||||| | ||| ||||| || ||||||||||||||||||||| |
|
|
| T |
1687254 |
tttcacagaaagtaatgaaaggatctcgacgaggagatcatcagagaagaacaccggcgacgga |
1687317 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 434 - 512
Target Start/End: Original strand, 3573296 - 3573374
Alignment:
| Q |
434 |
tcaatagaaagtgaggatcagcaacaagggtaaacgaagggttatcgagtatacgaggtatagggtatggaatgatact |
512 |
Q |
| |
|
|||||||| |||||| |||||| ||||||||||||||||||||||| |||| ||||| |||||| |||||||||||||| |
|
|
| T |
3573296 |
tcaatagagagtgagaatcagcgacaagggtaaacgaagggttatcaagtaaacgagatataggatatggaatgatact |
3573374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 3561306 - 3561443
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaactctcacatgggttgtcaattcttcgtcgacgccaaggtaa |
198 |
Q |
| |
|
||||||||||| || |||||||||||||||||||||||||||||||| |||| |||| ||||||| | | | ||||||| || ||| || |||| |
|
|
| T |
3561306 |
aagaggaacaataggaaaactttcaatatttctccaaacattatcaccaaaaccgaaagctctcacctcgctagtcaattgatc----acg--aatgtaa |
3561399 |
T |
 |
| Q |
199 |
cgtgacgcaaccactttaaaagttccagtggaattatcacaacc |
242 |
Q |
| |
|
| |||||||||||||||| || | ||||| |||||||||||||| |
|
|
| T |
3561400 |
catgacgcaaccactttataaatgccagttgaattatcacaacc |
3561443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 434 - 508
Target Start/End: Original strand, 1686950 - 1687024
Alignment:
| Q |
434 |
tcaatagaaagtgaggatcagcaacaagggtaaacgaagggttatcgagtatacgaggtatagggtatggaatga |
508 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| ||| |||||||||||| || || |||||| |||||||||| |
|
|
| T |
1686950 |
tcaatagagagtgaggatcagcaacaagggtaatcgacaggttatcgagtaaacaagatataggatatggaatga |
1687024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 677
Target Start/End: Original strand, 3561795 - 3561915
Alignment:
| Q |
557 |
ggatttcgtgattttaatttcttgaagtgaaatttgacaaaattgggatcggaaatgagagttttccaaggattgcttacacatttgaatcgaagtagag |
656 |
Q |
| |
|
|||||||||| | || ||||||||| ||| ||||| || || ||||| ||||||||||| |||||| || ||||||||||||||||||| ||||| |
|
|
| T |
3561795 |
ggatttcgtgttgttgatttcttgaggtgtaatttcacgaaggaaggatccgaaatgagagtgttccaatatttacttacacatttgaatcgaattagag |
3561894 |
T |
 |
| Q |
657 |
attttacaggaagtaatgaaa |
677 |
Q |
| |
|
|||||| |||||||| |||| |
|
|
| T |
3561895 |
attttatgggaagtaacgaaa |
3561915 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 64
Target Start/End: Original strand, 1686542 - 1686598
Alignment:
| Q |
8 |
gagtgatcgggtcttcatcttgaatagccaaccagttaagagtgccattaagaaaca |
64 |
Q |
| |
|
||||||| ||| | |||| ||||| ||||||||| |||||||||||||||||||||| |
|
|
| T |
1686542 |
gagtgattgggacgtcattttgaacagccaaccaattaagagtgccattaagaaaca |
1686598 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 263 - 335
Target Start/End: Original strand, 3573134 - 3573206
Alignment:
| Q |
263 |
cagaatcacaaaaacaaccaattttttgagatattttcctagtggctgggttccataaacggaaccagtactc |
335 |
Q |
| |
|
||||||||| |||| | || ||||||||||||||||||| ||||| |||||||| || |||| ||||||||| |
|
|
| T |
3573134 |
cagaatcacgaaaataccccattttttgagatattttccgggtggcagggttccagaatcggagccagtactc |
3573206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 335
Target Start/End: Original strand, 11849195 - 11849250
Alignment:
| Q |
280 |
ccaattttttgagatattttcctagtggctgggttccataaacggaaccagtactc |
335 |
Q |
| |
|
|||| |||| ||||| || |||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
11849195 |
ccaaattttggagatgttgtcctggtggctgggttccataaacggagccagtactc |
11849250 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 299 - 332
Target Start/End: Original strand, 3561512 - 3561545
Alignment:
| Q |
299 |
tcctagtggctgggttccataaacggaaccagta |
332 |
Q |
| |
|
||||||||||||||||||||||||||| |||||| |
|
|
| T |
3561512 |
tcctagtggctgggttccataaacggagccagta |
3561545 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 27)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 29899099 - 29899044
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactga |
154 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| |
|
|
| T |
29899099 |
aagaggaacaactgggaaactttcaatatctctccaaacattatcaccaaaactga |
29899044 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 29431340 - 29431398
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaa |
157 |
Q |
| |
|
|||||||||||| |||||||||||||||| ||||||||||||||||| |||||| |||| |
|
|
| T |
29431340 |
aagaggaacaacagggaaactttcaatatctctccaaacattatcactcaaacttaaaa |
29431398 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 29859173 - 29859109
Alignment:
| Q |
102 |
aggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaactctcacat |
166 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||||||| |||||||||||||| | || |||||||| |
|
|
| T |
29859173 |
aggatcaaccgggaaactttcaatatctctccaaacgttatcacccaaacttagaattctcacat |
29859109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 115 - 166
Target Start/End: Complemental strand, 24391123 - 24391072
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactctcacat |
166 |
Q |
| |
|
||||||| |||||||||||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
24391123 |
aaactttgaatatttctccaaatattatcacccaaactaaaaactctcacat |
24391072 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 29106539 - 29106484
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactga |
154 |
Q |
| |
|
||||||| |||||||||||||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
29106539 |
aagaggatcaaccgggaaactttcaacatctctccaaacattatcaccaaaactga |
29106484 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 162
Target Start/End: Complemental strand, 22021098 - 22021051
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactctc |
162 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| || |||||| |
|
|
| T |
22021098 |
aaactttcaatatttctccaaacattatcgcccaaactaaatactctc |
22021051 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 9807549 - 9807511
Alignment:
| Q |
120 |
ttcaatatttctccaaacattatcacccaaactgaaaac |
158 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9807549 |
ttcaatatctctccaaacattatcacccaaactgaaaac |
9807511 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 29074777 - 29074731
Alignment:
| Q |
108 |
aaccgggaaactttcaatatttctccaaacattatcacccaaactga |
154 |
Q |
| |
|
||||||||||||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
29074777 |
aaccgggaaactttcaacatctctccaaacattatcaccaaaactga |
29074731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 19637584 - 19637633
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||||| ||||||||||||||| |||||||| ||||| ||||||||||| |
|
|
| T |
19637584 |
aaactttgaatatttctccaaactttatcaccaaaactaaaaactctcac |
19637633 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 22036816 - 22036779
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaact |
152 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22036816 |
aaactttcaatatttctccaaacattatcgcccaaact |
22036779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 22473492 - 22473529
Alignment:
| Q |
127 |
tttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22473492 |
tttctccaaacattatcacccaaactgaagactctcac |
22473529 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 144
Target Start/End: Original strand, 29454445 - 29454490
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacattatca |
144 |
Q |
| |
|
||||||| |||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
29454445 |
aagaggagcaacagggaaactttcaatatctctccaaacattatca |
29454490 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 29476676 - 29476740
Alignment:
| Q |
102 |
aggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaactctcacat |
166 |
Q |
| |
|
||||||||| |||||||||| ||| | ||||||||||||||| || ||||||| || |||||||| |
|
|
| T |
29476676 |
aggaacaacggggaaactttgaatctctctccaaacattatctccaaaactgagaattctcacat |
29476740 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 164
Target Start/End: Original strand, 19351386 - 19351449
Alignment:
| Q |
101 |
gaggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||||||| ||| |||||| ||||| ||||||||||||||||| |||||| |||||| |||| |
|
|
| T |
19351386 |
gaggaacaatcggtaaacttggaatatctctccaaacattatcactcaaactaaaaactttcac |
19351449 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 335
Target Start/End: Complemental strand, 29074608 - 29074553
Alignment:
| Q |
280 |
ccaattttttgagatattttcctagtggctgggttccataaacggaaccagtactc |
335 |
Q |
| |
|
|||| |||| ||||| || |||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
29074608 |
ccaaattttggagatgttgtcctggtggctgggttccataaacggagccagtactc |
29074553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 280 - 335
Target Start/End: Complemental strand, 29106343 - 29106288
Alignment:
| Q |
280 |
ccaattttttgagatattttcctagtggctgggttccataaacggaaccagtactc |
335 |
Q |
| |
|
|||| |||| ||||| || |||| |||||||||||||||||||||| ||||||||| |
|
|
| T |
29106343 |
ccaaattttggagatgttgtcctggtggctgggttccataaacggagccagtactc |
29106288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 29445989 - 29446036
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacattatcacc |
146 |
Q |
| |
|
|||||||||||| |||||||||| ||| | |||||||||||||||||| |
|
|
| T |
29445989 |
aagaggaacaacggggaaactttgaatctgtctccaaacattatcacc |
29446036 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 157
Target Start/End: Complemental strand, 20414618 - 20414576
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaa |
157 |
Q |
| |
|
||||||| |||| ||||||||||||||||||||||||| |||| |
|
|
| T |
20414618 |
aaacttttaatacttctccaaacattatcacccaaactaaaaa |
20414576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 290 - 332
Target Start/End: Complemental strand, 29858955 - 29858913
Alignment:
| Q |
290 |
gagatattttcctagtggctgggttccataaacggaaccagta |
332 |
Q |
| |
|
||||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
29858955 |
gagatgttgtccttgtggctgggttccataaacggaaccagta |
29858913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 280 - 334
Target Start/End: Complemental strand, 29880806 - 29880752
Alignment:
| Q |
280 |
ccaattttttgagatattttcctagtggctgggttccataaacggaaccagtact |
334 |
Q |
| |
|
|||| ||| |||||||||||| |||||| |||||||||||||| ||| ||||||| |
|
|
| T |
29880806 |
ccaaatttatgagatattttcttagtggatgggttccataaacagaagcagtact |
29880752 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 29884991 - 29884949
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacatta |
141 |
Q |
| |
|
|||||||||||| || ||||||||||||| ||||||||||||| |
|
|
| T |
29884991 |
aagaggaacaactggaaaactttcaatatctctccaaacatta |
29884949 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 12820674 - 12820715
Alignment:
| Q |
291 |
agatattttcctagtggctgggttccataaacggaaccagta |
332 |
Q |
| |
|
||||||||||||||||||||||||||| | | |||||||||| |
|
|
| T |
12820674 |
agatattttcctagtggctgggttccagatatggaaccagta |
12820715 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 18953272 - 18953321
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||||| ||||| ||||||||||||||| || ||| ||||||||||||| |
|
|
| T |
18953272 |
aaactttgaatatgtctccaaacattatcgccaaaattgaaaactctcac |
18953321 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 18983319 - 18983368
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||||| ||||| ||||||||||||||| || ||| ||||||||||||| |
|
|
| T |
18983319 |
aaactttgaatatgtctccaaacattatcgcctaaattgaaaactctcac |
18983368 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 18997965 - 18998014
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||||| ||||| ||||||||||||||| || ||| ||||||||||||| |
|
|
| T |
18997965 |
aaactttgaatatgtctccaaacattatcgcctaaattgaaaactctcac |
18998014 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 29880980 - 29880931
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||||||||||||||||||||||| |||||| | | ||| ||||||||| |
|
|
| T |
29880980 |
aaactttcaatatttctccaaacatcatcaccaagattgagaactctcac |
29880931 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 29898903 - 29898858
Alignment:
| Q |
280 |
ccaattttttgagatattttcctagtggctgggttccataaacgga |
325 |
Q |
| |
|
|||| |||||||||| || |||| |||||||||||||||||||||| |
|
|
| T |
29898903 |
ccaaatttttgagatgttgtcctggtggctgggttccataaacgga |
29898858 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 3625469 - 3625418
Alignment:
| Q |
113 |
ggaaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||| |||| |
|
|
| T |
3625469 |
ggaaactttcaatatttctccaaacattatcaccaaaactgagaactttcac |
3625418 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 42297872 - 42297807
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||||||| ||||| ||||||| |||| |||||||||||||||| ||||||| || |||||||| |
|
|
| T |
42297872 |
aagaggaactaccggaaaactttgaatagttctccaaacattatcttccaaactaaagactctcac |
42297807 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 16723 - 16761
Alignment:
| Q |
123 |
aatatttctccaaacattatcacccaaactgaaaactct |
161 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
16723 |
aatatttctccaaacattatcgcccaaagtgaaaactct |
16761 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 6954856 - 6954906
Alignment:
| Q |
109 |
accgggaaactttcaatatttctccaaacattatcacccaaactgaaaact |
159 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||| | |||||| |
|
|
| T |
6954856 |
accgggaaacaatcaatatctctccaaacattatcacccaaagtaaaaact |
6954906 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 33568705 - 33568660
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactc |
160 |
Q |
| |
|
||||||| ||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
33568705 |
aaactttgaatatttctccaacaactatcacccaaactgaaaactc |
33568660 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000008; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 161
Target Start/End: Original strand, 20712884 - 20712922
Alignment:
| Q |
123 |
aatatttctccaaacattatcacccaaactgaaaactct |
161 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||| |
|
|
| T |
20712884 |
aatatttctccaaacattatcgcccaaagtgaaaactct |
20712922 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 18921091 - 18921140
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||||| ||||| |||||||||||||||| ||||||||||||| |||| |
|
|
| T |
18921091 |
aaactttgaatatccctccaaacattatcactcaaactgaaaactttcac |
18921140 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0707 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0707
Description:
Target: scaffold0707; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 5099 - 5054
Alignment:
| Q |
115 |
aaactttcaatatttctccaaacattatcacccaaactgaaaactc |
160 |
Q |
| |
|
||||||| ||||||||||||| | ||||||||||||||||||||| |
|
|
| T |
5099 |
aaactttgaatatttctccaacaactatcacccaaactgaaaactc |
5054 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0128 (Bit Score: 30; Significance: 0.0000003; HSPs: 2)
Name: scaffold0128
Description:
Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 3895 - 3830
Alignment:
| Q |
99 |
aagaggaacaaccgggaaactttcaatatttctccaaacattatcacccaaactgaaaactctcac |
164 |
Q |
| |
|
||||||||| ||||| |||||| |||| ||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
3895 |
aagaggaactaccggaaaacttggaatagttctccaaacattattcgccaaactaaaaactctcac |
3830 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0128; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 8314 - 8269
Alignment:
| Q |
118 |
ctttcaatatttctccaaacattatcacccaaactgaaaactctca |
163 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||| || ||||||| |
|
|
| T |
8314 |
ctttgaatatatctccaaacattatcacccaaactaaagactctca |
8269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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