View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4474-Insertion-5 (Length: 444)

Name: NF4474-Insertion-5
Description: NF4474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4474-Insertion-5
NF4474-Insertion-5
[»] chr1 (16 HSPs)
chr1 (8-444)||(15873731-15874168)
chr1 (88-174)||(15925577-15925663)
chr1 (237-312)||(15925577-15925652)
chr1 (334-378)||(9922202-9922246)
chr1 (334-379)||(38327137-38327182)
chr1 (335-374)||(40905823-40905862)
chr1 (329-381)||(27446671-27446723)
chr1 (330-374)||(33090151-33090195)
chr1 (334-377)||(41081251-41081294)
chr1 (334-372)||(8098183-8098221)
chr1 (334-379)||(16469245-16469290)
chr1 (355-384)||(46967356-46967385)
chr1 (348-384)||(6108848-6108884)
chr1 (334-378)||(8037952-8037996)
chr1 (345-377)||(49647279-49647311)
chr1 (334-382)||(52736627-52736675)
[»] chr7 (4 HSPs)
chr7 (330-381)||(46896119-46896170)
chr7 (334-379)||(18819454-18819499)
chr7 (334-375)||(32002076-32002117)
chr7 (344-382)||(42713649-42713687)
[»] chr3 (15 HSPs)
chr3 (334-380)||(46612908-46612954)
chr3 (334-378)||(20494018-20494062)
chr3 (345-379)||(53506225-53506259)
chr3 (334-379)||(223143-223188)
chr3 (344-377)||(54258449-54258482)
chr3 (334-382)||(42139556-42139604)
chr3 (334-384)||(1707271-1707322)
chr3 (347-382)||(26599628-26599663)
chr3 (334-377)||(34881097-34881140)
chr3 (334-377)||(34881372-34881415)
chr3 (345-379)||(35418065-35418099)
chr3 (327-384)||(158558-158615)
chr3 (345-378)||(4360389-4360422)
chr3 (345-381)||(20464588-20464624)
chr3 (345-377)||(51996246-51996278)
[»] chr6 (4 HSPs)
chr6 (334-391)||(35107972-35108029)
chr6 (334-374)||(19745339-19745379)
chr6 (328-379)||(15611892-15611943)
chr6 (335-379)||(988918-988962)
[»] chr5 (5 HSPs)
chr5 (334-379)||(37993617-37993662)
chr5 (336-383)||(13762192-13762239)
chr5 (329-383)||(10293507-10293561)
chr5 (334-376)||(16458433-16458475)
chr5 (345-382)||(10301392-10301429)
[»] chr4 (19 HSPs)
chr4 (334-379)||(29728739-29728784)
chr4 (334-378)||(23149861-23149905)
chr4 (337-407)||(12764318-12764391)
chr4 (334-372)||(28485799-28485837)
chr4 (345-382)||(47774069-47774106)
chr4 (334-379)||(56446880-56446925)
chr4 (330-370)||(28486039-28486079)
chr4 (345-376)||(20863762-20863793)
chr4 (343-378)||(50744797-50744832)
chr4 (334-380)||(24166621-24166667)
chr4 (354-384)||(50096413-50096443)
chr4 (345-378)||(18124286-18124319)
chr4 (334-379)||(19470148-19470193)
chr4 (345-378)||(22232515-22232548)
chr4 (334-379)||(41136518-41136563)
chr4 (334-383)||(47064041-47064090)
chr4 (344-376)||(10184756-10184788)
chr4 (335-379)||(25209818-25209862)
chr4 (344-380)||(49437746-49437782)
[»] chr8 (8 HSPs)
chr8 (334-382)||(39162249-39162297)
chr8 (334-379)||(26413393-26413438)
chr8 (334-382)||(5135244-5135292)
chr8 (334-382)||(32535485-32535533)
chr8 (334-377)||(20692883-20692926)
chr8 (344-381)||(6802056-6802093)
chr8 (345-382)||(30005763-30005800)
chr8 (351-379)||(38030277-38030305)
[»] chr2 (10 HSPs)
chr2 (344-400)||(26533821-26533878)
chr2 (326-378)||(2579087-2579139)
chr2 (344-400)||(16452168-16452224)
chr2 (334-373)||(15997486-15997525)
chr2 (347-400)||(43821147-43821201)
chr2 (334-371)||(946318-946355)
chr2 (334-379)||(35962534-35962579)
chr2 (334-390)||(10697830-10697886)
chr2 (345-373)||(33582411-33582439)
chr2 (334-378)||(37519589-37519633)


Alignment Details
Target: chr1 (Bit Score: 394; Significance: 0; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 394; E-Value: 0
Query Start/End: Original strand, 8 - 444
Target Start/End: Complemental strand, 15874168 - 15873731
Alignment:
Q  8 acatctatcatcgtcatcacatcacaacaatatatataaccttcttcatctctttcattagactttactttcaacgacatacaacaccatcacactcctt 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  15874168 acatctatcatcgtcatcacatcacaacaatatatataaccttcttcatctctttcattagactttactttcaaagacatacaacaccatcacactcctt 15874069  T
Q  108 gagtttcatcagaactttcagattcatcataattcaaggtttatacaacacccttctgcttattttatttaaactagcacaatatttgtttttctaatga 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15874068 gagtttcatcagaactttcagattcatcataattcaaggtttatacaacacccttctgcttattttatttaaactaggacaatatttgtttttctaatga 15873969  T
Q  208 taaatcttagtatgataaattttagcattacactccttgagtttcagcaaaactttcagatttatcataattcaaggtttatacaacactcttttgcttc 307  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15873968 taaatcttagtatgataatgtttagcattacactccttgagtttcagcaaaactttcagatttatcataattcaaggtttatacaacactcttttgcttc 15873869  T
Q  308 ttttatttaaactagttcaatatttgtttttaataacaaatgttagtatgttaattgttatgttagtt-ttttctcttcgttagggcttgaaccttgaac 406  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  15873868 ttttatttaaactagtacaatatttatttttaataacaaatgttagtatgttaattgttatgttagtttttttctcttcgttagggctggaaccttgaac 15873769  T
Q  407 gttcaattgaccaacctttagctcaaaacagttgagct 444  Q
    || ||| |||||||||||||||||||||||||||||||    
T  15873768 gtccaactgaccaacctttagctcaaaacagttgagct 15873731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 15925663 - 15925577
Alignment:
Q  88 acaacaccatcacactccttgagtttcatcagaactttcagattcatcataattcaaggtttatacaacacccttctgcttatttta 174  Q
    |||||| |||||||||| || ||||||| || ||| ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  15925663 acaacaacatcacactctttcagtttcagcacaaccttcagattcatcataattcaaggtttatacaacacccttttgtttatttta 15925577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 237 - 312
Target Start/End: Complemental strand, 15925652 - 15925577
Alignment:
Q  237 acactccttgagtttcagcaaaactttcagatttatcataattcaaggtttatacaacactcttttgcttctttta 312  Q
    |||||| || |||||||||| ||| |||||||| |||||||||||||||||||||||||| |||||| || |||||    
T  15925652 acactctttcagtttcagcacaaccttcagattcatcataattcaaggtttatacaacacccttttgtttatttta 15925577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 334 - 378
Target Start/End: Complemental strand, 9922246 - 9922202
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttt 378  Q
    |||||||| ||||||||||||||||||||||||||||||||||||    
T  9922246 tttttaatgacaaatgttagtatgttaattgttatgttagttttt 9922202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 38327182 - 38327137
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  38327182 tttttaataacaaatattagtatgttaattgttatgttagtatttt 38327137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 335 - 374
Target Start/End: Complemental strand, 40905862 - 40905823
Alignment:
Q  335 ttttaataacaaatgttagtatgttaattgttatgttagt 374  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  40905862 ttttaatgacaaatgttagtatgttaattgttatgttagt 40905823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 381
Target Start/End: Complemental strand, 27446723 - 27446671
Alignment:
Q  329 atttgtttttaataacaaatgttagtatgttaattgttatgttagttttttct 381  Q
    |||| |||||||| |||||||||||||||||| ||||||||||  ||||||||    
T  27446723 atttttttttaatgacaaatgttagtatgttatttgttatgtttattttttct 27446671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 374
Target Start/End: Original strand, 33090151 - 33090195
Alignment:
Q  330 tttgtttttaataacaaatgttagtatgttaattgttatgttagt 374  Q
    |||||||| |||| |||||||||||||||||| ||||||||||||    
T  33090151 tttgttttaaatatcaaatgttagtatgttaactgttatgttagt 33090195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Complemental strand, 41081294 - 41081251
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttt 377  Q
    |||||| | |||||||||||||| ||||||||||||||||||||    
T  41081294 tttttagtgacaaatgttagtattttaattgttatgttagtttt 41081251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 372
Target Start/End: Original strand, 8098183 - 8098221
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgtta 372  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  8098183 ttttcaataataaatgttagtatgttaattgttatgtta 8098221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 16469290 - 16469245
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||| ||| |||||| |||||| |||||||||||||||||||||||    
T  16469290 ttttgaatgacaaatattagtaggttaattgttatgttagtttttt 16469245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 384
Target Start/End: Original strand, 46967356 - 46967385
Alignment:
Q  355 atgttaattgttatgttagttttttctctt 384  Q
    ||||||||||||||||||||||||||||||    
T  46967356 atgttaattgttatgttagttttttctctt 46967385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 6108848 - 6108884
Alignment:
Q  348 tgttagtatgttaattgttatgttagttttttctctt 384  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  6108848 tgttaatatgttaattattatgttagttttttctctt 6108884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 8037952 - 8037996
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttt 378  Q
    |||| ||| |||| |||||||| ||||||||||||||||||||||    
T  8037952 ttttaaatgacaattgttagtacgttaattgttatgttagttttt 8037996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 377
Target Start/End: Complemental strand, 49647311 - 49647279
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagtttt 377  Q
    |||| ||||||||||||||||||||||||||||    
T  49647311 aaattttagtatgttaattgttatgttagtttt 49647279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 52736627 - 52736675
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttttctc 382  Q
    |||| ||| |||||||||| ||||||||||||||||| ||| |||||||    
T  52736627 ttttgaatgacaaatgttactatgttaattgttatgtgagtattttctc 52736675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 330 - 381
Target Start/End: Original strand, 46896119 - 46896170
Alignment:
Q  330 tttgtttttaataacaaatgttagtatgttaattgttatgttagttttttct 381  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  46896119 tttgtttttaatgacaaatgttagtatgttaattgttattttagttttttct 46896170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 18819454 - 18819499
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||    
T  18819454 tttttaataataaatgttagtatgttaattgttatattagtttttt 18819499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 375
Target Start/End: Original strand, 32002076 - 32002117
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtt 375  Q
    ||||||||  ||||||||||||||||||||||||||||||||    
T  32002076 tttttaatggcaaatgttagtatgttaattgttatgttagtt 32002117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 382
Target Start/End: Complemental strand, 42713687 - 42713649
Alignment:
Q  344 caaatgttagtatgttaattgttatgttagttttttctc 382  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  42713687 caaatgttagtatgttgattgatatgttagttttttctc 42713649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 46612908 - 46612954
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttttc 380  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  46612908 tttttaataacaaatgttaatatgttaattgttatgttagtattttc 46612954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 378
Target Start/End: Complemental strand, 20494062 - 20494018
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttt 378  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||    
T  20494062 tttttaatgacaaatgttagtatgttaattattatgttagttttt 20494018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 345 - 379
Target Start/End: Complemental strand, 53506259 - 53506225
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||||||||||||||||||||||||||||||    
T  53506259 aaatgttagtatgttaattgttatgttagtttttt 53506225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 223188 - 223143
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||| | |||||||||||||||||||||| ||||||||||||    
T  223188 tttttaatgataaatgttagtatgttaattgttgtgttagtttttt 223143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 377
Target Start/End: Complemental strand, 54258482 - 54258449
Alignment:
Q  344 caaatgttagtatgttaattgttatgttagtttt 377  Q
    ||||||||||||||||||||||||||||||||||    
T  54258482 caaatgttagtatgttaattgttatgttagtttt 54258449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 382
Target Start/End: Original strand, 42139556 - 42139604
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttttctc 382  Q
    |||||||| ||||||||||||||||| || ||||||||||| |||||||    
T  42139556 tttttaatgacaaatgttagtatgttgatagttatgttagtattttctc 42139604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 384
Target Start/End: Original strand, 1707271 - 1707322
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagt-tttttctctt 384  Q
    |||||||| |||||||||| ||||||||||||||||||| | ||||||||||    
T  1707271 tttttaatgacaaatgttattatgttaattgttatgttattatttttctctt 1707322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 347 - 382
Target Start/End: Complemental strand, 26599663 - 26599628
Alignment:
Q  347 atgttagtatgttaattgttatgttagttttttctc 382  Q
    |||||||||||||||||||||||||||| |||||||    
T  26599663 atgttagtatgttaattgttatgttagtattttctc 26599628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Complemental strand, 34881140 - 34881097
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttt 377  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||    
T  34881140 tttttaatgacaaatgttaatatgttaattgttttgttagtttt 34881097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Complemental strand, 34881415 - 34881372
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttt 377  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||    
T  34881415 tttttaatgacaaatgttaatatgttaattgttttgttagtttt 34881372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 345 - 379
Target Start/End: Original strand, 35418065 - 35418099
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||||||||||||||||||||||||| ||||    
T  35418065 aaatgttagtatgttaattgttatgttagtatttt 35418099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 384
Target Start/End: Original strand, 158558 - 158615
Alignment:
Q  327 atatttgtttttaataacaaatgttagtatgttaattgttatgttagttttttctctt 384  Q
    |||||| |||||| | ||||||||||||||  |||||||||| ||||||||| |||||    
T  158558 atatttttttttagtcacaaatgttagtataataattgttatcttagtttttactctt 158615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 4360389 - 4360422
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagttttt 378  Q
    ||||||||| ||||||||||||||||||||||||    
T  4360389 aaatgttagcatgttaattgttatgttagttttt 4360422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 381
Target Start/End: Complemental strand, 20464624 - 20464588
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagttttttct 381  Q
    |||||||||||| |||||||||||||||| |||||||    
T  20464624 aaatgttagtatattaattgttatgttagatttttct 20464588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 377
Target Start/End: Complemental strand, 51996278 - 51996246
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagtttt 377  Q
    |||| ||||||||||||||||||||||||||||    
T  51996278 aaatattagtatgttaattgttatgttagtttt 51996246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 35108029 - 35107972
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttttctcttcgttagg 391  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||||||| | ||||||    
T  35108029 tttttaatgacaaatgttagtatgttaattattatattagttttttctccttgttagg 35107972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 374
Target Start/End: Complemental strand, 19745379 - 19745339
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagt 374  Q
    |||||||| |||| |||||||||||||||||||||||||||    
T  19745379 tttttaatgacaattgttagtatgttaattgttatgttagt 19745339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 15611943 - 15611892
Alignment:
Q  328 tatttgtttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    ||||| |||| ||||| |||||||||||| ||||||||||||||| ||||||    
T  15611943 tatttattttgaataaaaaatgttagtatattaattgttatgttattttttt 15611892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 379
Target Start/End: Original strand, 988918 - 988962
Alignment:
Q  335 ttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||  ||||||||||||| ||||||||||||||| ||||||    
T  988918 ttttaatggcaaatgttagtattttaattgttatgttaatttttt 988962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 37993662 - 37993617
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||  |||||||||||||||||||||||||||||||||||||    
T  37993662 tttttaacgacaaatgttagtatgttaattgttatgttagtttttt 37993617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 336 - 383
Target Start/End: Original strand, 13762192 - 13762239
Alignment:
Q  336 tttaataacaaatgttagtatgttaattgttatgttagttttttctct 383  Q
    |||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  13762192 tttaatgacaaatattaatatgttaattgttatgttagttttttctct 13762239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 383
Target Start/End: Original strand, 10293507 - 10293561
Alignment:
Q  329 atttgtttttaataacaaatgttagtatgttaattgttatgttagttttttctct 383  Q
    |||| ||| |||| ||||||||||||||||||||| ||||||||  |||||||||    
T  10293507 atttttttataatgacaaatgttagtatgttaattattatgttaaatttttctct 10293561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 16458475 - 16458433
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttt 376  Q
    |||||||| ||||||||| |||||||||||||||||| |||||    
T  16458475 tttttaatgacaaatgttggtatgttaattgttatgtcagttt 16458433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 10301392 - 10301429
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagttttttctc 382  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  10301392 aaatgttagtatgttaattattatgttagatttttctc 10301429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000003; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 29728739 - 29728784
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||    
T  29728739 tttttaatgacaagtgttagtatgttaattgttatgttagtttttt 29728784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 378
Target Start/End: Original strand, 23149861 - 23149905
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttt 378  Q
    |||||||| |||||||||||||||||||||||||||||| |||||    
T  23149861 tttttaatgacaaatgttagtatgttaattgttatgttatttttt 23149905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 337 - 407
Target Start/End: Complemental strand, 12764391 - 12764318
Alignment:
Q  337 ttaataacaaatgttagtatgttaattgttatgttag---ttttttctcttcgttagggcttgaaccttgaacg 407  Q
    ||||| |||||||||| ||||||||||||||| ||||   |||||||||||||||| | ||||||||| |||||    
T  12764391 ttaatcacaaatgttattatgttaattgttatattagtatttttttctcttcgttatgacttgaacctggaacg 12764318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 334 - 372
Target Start/End: Complemental strand, 28485837 - 28485799
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgtta 372  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  28485837 tttttaatgacaaatgttagtatgttaattgttatgtta 28485799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 345 - 382
Target Start/End: Original strand, 47774069 - 47774106
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagttttttctc 382  Q
    |||||||||||||||||||||||||||||| |||||||    
T  47774069 aaatgttagtatgttaattgttatgttagtattttctc 47774106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 56446880 - 56446925
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||    
T  56446880 tttttaatgacaaatgttagtatgttaattgatatgttagtatttt 56446925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 370
Target Start/End: Complemental strand, 28486079 - 28486039
Alignment:
Q  330 tttgtttttaataacaaatgttagtatgttaattgttatgt 370  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  28486079 tttgtttttaatgacaaatgttaatatgttaattgttatgt 28486039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 345 - 376
Target Start/End: Complemental strand, 20863793 - 20863762
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagttt 376  Q
    ||||||||||||||||||||||||||||||||    
T  20863793 aaatgttagtatgttaattgttatgttagttt 20863762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 343 - 378
Target Start/End: Complemental strand, 50744832 - 50744797
Alignment:
Q  343 acaaatgttagtatgttaattgttatgttagttttt 378  Q
    ||||||||||| ||||||||||||||||||||||||    
T  50744832 acaaatgttagcatgttaattgttatgttagttttt 50744797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 334 - 380
Target Start/End: Original strand, 24166621 - 24166667
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttttc 380  Q
    |||||||| ||||||| ||||||||| |||||||||||||| |||||    
T  24166621 tttttaatgacaaatgatagtatgttgattgttatgttagtattttc 24166667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 354 - 384
Target Start/End: Complemental strand, 50096443 - 50096413
Alignment:
Q  354 tatgttaattgttatgttagttttttctctt 384  Q
    |||||||||||||||||||||||||||||||    
T  50096443 tatgttaattgttatgttagttttttctctt 50096413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 378
Target Start/End: Original strand, 18124286 - 18124319
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagttttt 378  Q
    ||||||||| ||||||||||||||||||||||||    
T  18124286 aaatgttagcatgttaattgttatgttagttttt 18124319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 19470148 - 19470193
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||||| |||| ||| ||||||||||||||||||| ||||||    
T  19470148 tttttaataaaaaatattaatatgttaattgttatgttaatttttt 19470193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 378
Target Start/End: Complemental strand, 22232548 - 22232515
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagttttt 378  Q
    |||||||||| |||||||||||||||||||||||    
T  22232548 aaatgttagtttgttaattgttatgttagttttt 22232515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 41136518 - 41136563
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||| | ||| |||||||||||||||||||||||||||| ||||    
T  41136518 tttttagtgacagatgttagtatgttaattgttatgttagtatttt 41136563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 383
Target Start/End: Original strand, 47064041 - 47064090
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttttctct 383  Q
    |||||||| |||||||||||||| ||||||| ||||||| | ||||||||    
T  47064041 tttttaatgacaaatgttagtattttaattgctatgttaatattttctct 47064090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 376
Target Start/End: Original strand, 10184756 - 10184788
Alignment:
Q  344 caaatgttagtatgttaattgttatgttagttt 376  Q
    ||||||||||||| |||||||||||||||||||    
T  10184756 caaatgttagtatcttaattgttatgttagttt 10184788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 335 - 379
Target Start/End: Complemental strand, 25209862 - 25209818
Alignment:
Q  335 ttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||  |||||||||||||||||||| |||||||||| ||||    
T  25209862 ttttaatggcaaatgttagtatgttaattattatgttagtatttt 25209818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 380
Target Start/End: Complemental strand, 49437782 - 49437746
Alignment:
Q  344 caaatgttagtatgttaattgttatgttagttttttc 380  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  49437782 caaatgttagtatgttaattgttgtgttagtattttc 49437746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000001; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 39162297 - 39162249
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttttctc 382  Q
    ||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  39162297 tttttaatggcaaatgttagtatgttaattgttatgttagtattttctc 39162249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 26413393 - 26413438
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||    
T  26413393 ttttgaatgacaaatgttagtatgttaattgttatgttagcttttt 26413438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 5135292 - 5135244
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttttctc 382  Q
    ||||||||  |||||||||||||||||||||| |||||||| |||||||    
T  5135292 tttttaatggcaaatgttagtatgttaattgtaatgttagtattttctc 5135244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 382
Target Start/End: Complemental strand, 32535533 - 32535485
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttttctc 382  Q
    |||| ||| |||||||||| |||||||||||||||||||| ||||||||    
T  32535533 ttttgaatgacaaatgttaatatgttaattgttatgttagctttttctc 32535485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 377
Target Start/End: Complemental strand, 20692926 - 20692883
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttt 377  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||    
T  20692926 tttttaatggcaaatgttaatatgttaattgttatgttagtttt 20692883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 344 - 381
Target Start/End: Complemental strand, 6802093 - 6802056
Alignment:
Q  344 caaatgttagtatgttaattgttatgttagttttttct 381  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  6802093 caaacgttagtatgttaattgttatgttagtattttct 6802056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 345 - 382
Target Start/End: Complemental strand, 30005800 - 30005763
Alignment:
Q  345 aaatgttagtatgttaattgttatgttagttttttctc 382  Q
    |||||||| | |||||||||||||||||||||||||||    
T  30005800 aaatgttactttgttaattgttatgttagttttttctc 30005763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 379
Target Start/End: Original strand, 38030277 - 38030305
Alignment:
Q  351 tagtatgttaattgttatgttagtttttt 379  Q
    |||||||||||||||||||||||||||||    
T  38030277 tagtatgttaattgttatgttagtttttt 38030305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 26533878 - 26533821
Alignment:
Q  344 caaatgttagtatgttaattgttatgttagttttttct-cttcgttagggcttgaacc 400  Q
    ||||||||||||| ||| ||||||||||||| |||||| ||||| |||||||||||||    
T  26533878 caaatgttagtatattagttgttatgttagtattttctccttcgctagggcttgaacc 26533821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 326 - 378
Target Start/End: Complemental strand, 2579139 - 2579087
Alignment:
Q  326 aatatttgtttttaataacaaatgttagtatgttaattgttatgttagttttt 378  Q
    ||||||| |||| ||| | ||||||||||||| ||||||||||||||||||||    
T  2579139 aatattttttttcaatgataaatgttagtatgctaattgttatgttagttttt 2579087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 16452168 - 16452224
Alignment:
Q  344 caaatgttagtatgttaattgttatgttagttttttctcttcgttagggcttgaacc 400  Q
    ||||||||||||||||| |||||| |||||||||||||| | | |||| ||||||||    
T  16452168 caaatgttagtatgttatttgttacgttagttttttctccttgctaggacttgaacc 16452224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 373
Target Start/End: Complemental strand, 15997525 - 15997486
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttag 373  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  15997525 tttttaatgaaaaatgttagtatgttaattgttatgttag 15997486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 400
Target Start/End: Original strand, 43821147 - 43821201
Alignment:
Q  347 atgttagtatgttaattgttatgttagttttttctcttc-gttagggcttgaacc 400  Q
    ||||||||||||||||| |||||||| |||||||| ||| |||||| ||||||||    
T  43821147 atgttagtatgttaattattatgttaattttttcttttctgttaggacttgaacc 43821201  T

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Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 371
Target Start/End: Complemental strand, 946355 - 946318
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgtt 371  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  946355 tttttaataacaaatgttagtatgttaacggttatgtt 946318  T

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Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 379
Target Start/End: Original strand, 35962534 - 35962579
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagtttttt 379  Q
    |||||||| ||| || ||||||||||||||||||| ||||||||||    
T  35962534 tttttaatgacagatattagtatgttaattgttatattagtttttt 35962579  T

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Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 390
Target Start/End: Complemental strand, 10697886 - 10697830
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttttctcttcgttag 390  Q
    |||||||| | |||| ||||||| ||| ||| ||||||||||||||||||| |||||    
T  10697886 tttttaatgataaatattagtatattagttgctatgttagttttttctctttgttag 10697830  T

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Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 345 - 373
Target Start/End: Complemental strand, 33582439 - 33582411
Alignment:
Q  345 aaatgttagtatgttaattgttatgttag 373  Q
    |||||||||||||||||||||||||||||    
T  33582439 aaatgttagtatgttaattgttatgttag 33582411  T

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Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 334 - 378
Target Start/End: Complemental strand, 37519633 - 37519589
Alignment:
Q  334 tttttaataacaaatgttagtatgttaattgttatgttagttttt 378  Q
    |||| ||| |||||| ||| |||||||||||||||||||||||||    
T  37519633 ttttaaatgacaaatattaatatgttaattgttatgttagttttt 37519589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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