View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4475-Insertion-1 (Length: 1054)

Name: NF4475-Insertion-1
Description: NF4475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4475-Insertion-1
NF4475-Insertion-1
[»] chr2 (73 HSPs)
chr2 (13-899)||(35728024-35728913)
chr2 (899-1015)||(35727865-35727982)
chr2 (322-440)||(41153128-41153245)
chr2 (318-443)||(29169849-29169973)
chr2 (323-443)||(32457227-32457346)
chr2 (317-448)||(11030201-11030331)
chr2 (322-443)||(20555272-20555391)
chr2 (322-446)||(7943450-7943574)
chr2 (322-448)||(4410786-4410912)
chr2 (321-443)||(12962718-12962839)
chr2 (322-443)||(38983013-38983133)
chr2 (321-443)||(29988905-29989026)
chr2 (322-443)||(11794463-11794583)
chr2 (322-443)||(30758734-30758853)
chr2 (317-443)||(28248947-28249072)
chr2 (321-443)||(33824363-33824484)
chr2 (322-443)||(30761392-30761512)
chr2 (322-443)||(38554472-38554592)
chr2 (332-448)||(28014297-28014412)
chr2 (322-446)||(43713985-43714107)
chr2 (321-443)||(9152393-9152514)
chr2 (361-443)||(28494757-28494838)
chr2 (354-439)||(3837428-3837512)
chr2 (324-443)||(12873739-12873857)
chr2 (322-448)||(10204941-10205065)
chr2 (322-443)||(42698078-42698198)
chr2 (323-439)||(15384442-15384556)
chr2 (325-448)||(22333534-22333656)
chr2 (332-439)||(11182183-11182289)
chr2 (322-448)||(5109377-5109502)
chr2 (322-443)||(34447518-34447637)
chr2 (322-439)||(45571044-45571159)
chr2 (322-439)||(45574711-45574826)
chr2 (322-439)||(45578378-45578493)
chr2 (322-439)||(45582045-45582160)
chr2 (322-439)||(45585712-45585827)
chr2 (322-439)||(45589379-45589494)
chr2 (322-439)||(45593046-45593161)
chr2 (322-439)||(45596713-45596828)
chr2 (322-439)||(45600380-45600495)
chr2 (322-439)||(45604047-45604162)
chr2 (322-439)||(45607714-45607829)
chr2 (322-439)||(45611381-45611496)
chr2 (322-439)||(45615048-45615163)
chr2 (336-436)||(37670346-37670445)
chr2 (325-440)||(6971587-6971701)
chr2 (322-443)||(36881547-36881661)
chr2 (326-443)||(39445013-39445129)
chr2 (319-444)||(9121197-9121325)
chr2 (354-446)||(39118060-39118151)
chr2 (322-421)||(5281213-5281311)
chr2 (322-448)||(4044584-4044708)
chr2 (306-400)||(9373450-9373543)
chr2 (378-443)||(2936363-2936427)
chr2 (322-439)||(3838436-3838551)
chr2 (322-439)||(4063286-4063401)
chr2 (368-448)||(5559572-5559652)
chr2 (322-439)||(45034412-45034527)
chr2 (382-442)||(32487064-32487123)
chr2 (343-443)||(33273984-33274083)
chr2 (368-431)||(920474-920536)
chr2 (325-440)||(3365292-3365406)
chr2 (329-440)||(27311594-27311704)
chr2 (378-460)||(12486062-12486143)
chr2 (321-398)||(41205503-41205580)
chr2 (325-377)||(6971513-6971565)
chr2 (323-451)||(40691137-40691264)
chr2 (321-448)||(7833295-7833421)
chr2 (322-373)||(37076228-37076279)
chr2 (318-373)||(41120039-41120093)
chr2 (394-436)||(29060239-29060280)
chr2 (358-403)||(12397116-12397161)
chr2 (322-371)||(12486077-12486126)
[»] chr7 (53 HSPs)
chr7 (322-443)||(28677331-28677451)
chr7 (322-441)||(36245392-36245510)
chr7 (322-439)||(8566099-8566215)
chr7 (322-443)||(11668029-11668149)
chr7 (322-448)||(6838391-6838514)
chr7 (326-433)||(40142797-40142903)
chr7 (321-443)||(41850609-41850730)
chr7 (320-446)||(45533242-45533367)
chr7 (323-446)||(2610202-2610323)
chr7 (321-448)||(9979810-9979935)
chr7 (322-443)||(10007588-10007710)
chr7 (326-443)||(29365635-29365751)
chr7 (322-443)||(30869200-30869320)
chr7 (355-451)||(2399958-2400053)
chr7 (322-446)||(2523781-2523904)
chr7 (326-414)||(34117981-34118069)
chr7 (332-443)||(24163293-24163403)
chr7 (332-443)||(39153301-39153411)
chr7 (304-448)||(2680867-2681010)
chr7 (321-443)||(13807255-13807372)
chr7 (321-443)||(10462390-10462510)
chr7 (324-443)||(45441450-45441568)
chr7 (354-414)||(47987196-47987256)
chr7 (322-421)||(44682580-44682679)
chr7 (343-446)||(48838347-48838449)
chr7 (332-442)||(40176051-40176160)
chr7 (321-443)||(48082812-48082932)
chr7 (322-443)||(4925905-4926025)
chr7 (323-406)||(32811759-32811842)
chr7 (321-439)||(1366613-1366729)
chr7 (321-443)||(28020015-28020134)
chr7 (322-448)||(32811387-32811511)
chr7 (322-438)||(27231853-27231967)
chr7 (325-440)||(41395679-41395793)
chr7 (332-439)||(42456998-42457103)
chr7 (338-440)||(7456436-7456537)
chr7 (373-443)||(28298919-28298988)
chr7 (321-439)||(31227506-31227622)
chr7 (322-439)||(4826776-4826891)
chr7 (322-414)||(30823723-30823815)
chr7 (322-414)||(45981022-45981113)
chr7 (322-446)||(47942848-47942971)
chr7 (322-446)||(47948278-47948401)
chr7 (347-422)||(7430083-7430158)
chr7 (325-440)||(33901055-33901169)
chr7 (321-415)||(30486621-30486715)
chr7 (322-376)||(41863661-41863715)
chr7 (321-413)||(27163204-27163296)
chr7 (321-377)||(45058088-45058144)
chr7 (332-440)||(47280191-47280297)
chr7 (326-373)||(19512749-19512796)
chr7 (346-440)||(40234783-40234876)
chr7 (322-451)||(26563927-26564055)
[»] chr4 (74 HSPs)
chr4 (322-443)||(30191910-30192030)
chr4 (322-443)||(48361066-48361186)
chr4 (304-443)||(44111759-44111896)
chr4 (321-443)||(50121450-50121571)
chr4 (322-443)||(48195904-48196024)
chr4 (321-446)||(3162908-3163032)
chr4 (322-443)||(43117866-43117988)
chr4 (322-443)||(25477559-25477679)
chr4 (322-432)||(53225669-53225778)
chr4 (322-431)||(42169069-42169177)
chr4 (343-443)||(45096609-45096708)
chr4 (321-444)||(4386149-4386271)
chr4 (343-422)||(17284769-17284848)
chr4 (321-443)||(36132649-36132770)
chr4 (322-443)||(42670778-42670898)
chr4 (322-443)||(44061402-44061521)
chr4 (322-442)||(8347659-8347778)
chr4 (322-411)||(16412248-16412337)
chr4 (322-443)||(21554123-21554242)
chr4 (322-443)||(53658378-53658498)
chr4 (344-444)||(32714282-32714381)
chr4 (322-421)||(696385-696484)
chr4 (322-421)||(764683-764782)
chr4 (345-443)||(35429787-35429884)
chr4 (378-443)||(19150793-19150857)
chr4 (322-439)||(55190685-55190800)
chr4 (322-446)||(47943741-47943864)
chr4 (350-444)||(9044400-9044493)
chr4 (322-443)||(45828429-45828549)
chr4 (322-443)||(41116576-41116695)
chr4 (322-446)||(33010688-33010811)
chr4 (324-443)||(28020495-28020609)
chr4 (332-446)||(55951673-55951786)
chr4 (322-439)||(20459259-20459374)
chr4 (322-415)||(26066383-26066476)
chr4 (322-439)||(47866050-47866165)
chr4 (319-399)||(23226961-23227041)
chr4 (322-443)||(31977758-31977880)
chr4 (381-444)||(2583095-2583157)
chr4 (325-440)||(8347508-8347623)
chr4 (325-440)||(29686417-29686531)
chr4 (321-443)||(46434112-46434232)
chr4 (325-440)||(50511262-50511376)
chr4 (325-440)||(54864081-54864195)
chr4 (322-404)||(9894639-9894721)
chr4 (325-455)||(31853084-31853213)
chr4 (322-439)||(3043806-3043921)
chr4 (322-439)||(42804270-42804385)
chr4 (322-439)||(43020770-43020885)
chr4 (354-398)||(30206526-30206570)
chr4 (336-415)||(1140893-1140972)
chr4 (321-372)||(23042609-23042660)
chr4 (325-440)||(33622897-33623011)
chr4 (325-440)||(35877331-35877445)
chr4 (392-443)||(37991500-37991550)
chr4 (325-440)||(43141783-43141897)
chr4 (325-440)||(52136716-52136830)
chr4 (323-405)||(14859720-14859802)
chr4 (322-439)||(40780268-40780381)
chr4 (343-388)||(11372031-11372076)
chr4 (354-443)||(20114105-20114193)
chr4 (322-439)||(20745350-20745465)
chr4 (325-402)||(24100776-24100853)
chr4 (351-440)||(40592729-40592817)
chr4 (382-443)||(50685470-50685530)
chr4 (325-398)||(52278025-52278098)
chr4 (325-377)||(22210806-22210858)
chr4 (324-411)||(4698639-4698726)
chr4 (384-443)||(34226401-34226459)
chr4 (325-440)||(36196382-36196496)
chr4 (323-398)||(36866868-36866943)
chr4 (325-440)||(42159990-42160104)
chr4 (322-415)||(36866894-36866987)
chr4 (322-443)||(48361066-48361186)
[»] chr6 (35 HSPs)
chr6 (321-443)||(30627836-30627957)
chr6 (322-455)||(17265723-17265855)
chr6 (322-446)||(30895198-30895321)
chr6 (322-443)||(3064897-3065017)
chr6 (346-459)||(9077624-9077736)
chr6 (322-443)||(28630767-28630887)
chr6 (325-443)||(28863337-28863454)
chr6 (321-441)||(2972177-2972296)
chr6 (322-443)||(33119918-33120036)
chr6 (322-443)||(10283308-10283428)
chr6 (321-443)||(12999769-12999891)
chr6 (322-416)||(2230389-2230483)
chr6 (322-431)||(1158271-1158379)
chr6 (317-443)||(8052864-8052990)
chr6 (322-439)||(1836978-1837093)
chr6 (360-453)||(2937084-2937175)
chr6 (354-451)||(12450397-12450493)
chr6 (321-389)||(17705929-17705997)
chr6 (383-443)||(21162414-21162473)
chr6 (327-401)||(33127841-33127915)
chr6 (354-443)||(27909021-27909109)
chr6 (343-446)||(7649810-7649912)
chr6 (321-446)||(7649812-7649938)
chr6 (322-439)||(8646697-8646812)
chr6 (325-370)||(17598128-17598173)
chr6 (322-443)||(28630767-28630887)
chr6 (350-422)||(8920483-8920555)
chr6 (326-405)||(3012407-3012486)
chr6 (325-404)||(9343137-9343216)
chr6 (343-422)||(24265505-24265584)
chr6 (325-440)||(30438760-30438874)
chr6 (338-436)||(5483891-5483988)
chr6 (321-415)||(13417428-13417522)
chr6 (322-439)||(2810093-2810208)
chr6 (322-371)||(7257415-7257464)
[»] scaffold0123 (1 HSPs)
scaffold0123 (326-451)||(28093-28219)
[»] chr8 (51 HSPs)
chr8 (322-443)||(10839777-10839896)
chr8 (322-443)||(5031478-5031598)
chr8 (322-443)||(35149682-35149802)
chr8 (322-443)||(7693047-7693167)
chr8 (322-443)||(40483297-40483417)
chr8 (331-443)||(3236353-3236464)
chr8 (323-443)||(16448803-16448922)
chr8 (332-443)||(42122980-42123090)
chr8 (322-448)||(8803242-8803367)
chr8 (322-443)||(8793733-8793853)
chr8 (322-443)||(24618972-24619091)
chr8 (326-443)||(16008537-16008653)
chr8 (322-414)||(10184593-10184685)
chr8 (322-448)||(15726769-15726893)
chr8 (321-444)||(32597511-32597633)
chr8 (321-427)||(34711094-34711199)
chr8 (322-443)||(8453609-8453728)
chr8 (322-414)||(1223137-1223229)
chr8 (322-432)||(15720213-15720322)
chr8 (322-453)||(24915174-24915303)
chr8 (322-439)||(12958790-12958905)
chr8 (322-439)||(22429549-22429664)
chr8 (345-413)||(36191790-36191856)
chr8 (325-440)||(13831892-13832006)
chr8 (325-440)||(29690453-29690567)
chr8 (325-440)||(43932066-43932180)
chr8 (322-443)||(43332574-43332695)
chr8 (322-439)||(24177986-24178101)
chr8 (366-443)||(24821905-24821981)
chr8 (322-439)||(35011226-35011341)
chr8 (322-439)||(36366043-36366158)
chr8 (322-439)||(44796356-44796471)
chr8 (354-414)||(27789325-27789385)
chr8 (325-440)||(44579910-44580024)
chr8 (322-395)||(4156394-4156468)
chr8 (321-406)||(30924715-30924801)
chr8 (325-414)||(9550151-9550240)
chr8 (322-371)||(24822808-24822857)
chr8 (322-414)||(883660-883752)
chr8 (360-404)||(30255785-30255829)
chr8 (354-405)||(8818696-8818747)
chr8 (325-440)||(9633098-9633212)
chr8 (325-404)||(26998717-26998796)
chr8 (360-446)||(40651275-40651358)
chr8 (321-439)||(42786377-42786492)
chr8 (326-440)||(45372723-45372836)
chr8 (322-439)||(6899434-6899549)
chr8 (322-415)||(8793760-8793853)
chr8 (354-443)||(10396806-10396894)
chr8 (322-414)||(13831403-13831495)
chr8 (350-415)||(33057907-33057972)
[»] chr1 (49 HSPs)
chr1 (322-443)||(38040290-38040410)
chr1 (305-443)||(34332474-34332610)
chr1 (322-448)||(38737940-38738065)
chr1 (321-446)||(26070837-26070961)
chr1 (322-443)||(49944847-49944967)
chr1 (324-443)||(11386170-11386288)
chr1 (322-443)||(26760187-26760307)
chr1 (322-443)||(44939080-44939200)
chr1 (322-446)||(23923564-23923687)
chr1 (322-443)||(26924227-26924347)
chr1 (322-446)||(50155308-50155432)
chr1 (328-443)||(15342957-15343071)
chr1 (322-444)||(34146818-34146938)
chr1 (322-443)||(519847-519967)
chr1 (319-443)||(640533-640655)
chr1 (322-439)||(38590084-38590202)
chr1 (343-437)||(6661549-6661642)
chr1 (321-443)||(6793607-6793728)
chr1 (322-443)||(47912831-47912948)
chr1 (322-414)||(24305707-24305799)
chr1 (322-443)||(29256615-29256732)
chr1 (320-443)||(18744571-18744689)
chr1 (322-416)||(26823151-26823245)
chr1 (346-440)||(37178948-37179041)
chr1 (320-410)||(47883975-47884065)
chr1 (322-443)||(8971242-8971362)
chr1 (322-443)||(25021245-25021365)
chr1 (322-401)||(7375524-7375603)
chr1 (322-448)||(37515099-37515224)
chr1 (354-443)||(15286023-15286111)
chr1 (322-439)||(43929364-43929479)
chr1 (322-446)||(34662696-34662818)
chr1 (381-448)||(39748628-39748694)
chr1 (394-448)||(2351142-2351195)
chr1 (322-384)||(23923408-23923470)
chr1 (321-446)||(27819322-27819447)
chr1 (325-440)||(45977111-45977225)
chr1 (391-446)||(52427358-52427412)
chr1 (389-443)||(14647010-14647063)
chr1 (326-415)||(15351729-15351818)
chr1 (322-371)||(28359007-28359056)
chr1 (319-359)||(2855096-2855136)
chr1 (343-443)||(5891740-5891839)
chr1 (351-415)||(31362462-31362526)
chr1 (325-400)||(27687897-27687972)
chr1 (322-371)||(25021245-25021294)
chr1 (322-443)||(38737945-38738065)
chr1 (322-439)||(47678274-47678389)
chr1 (322-443)||(49944847-49944967)
[»] chr5 (50 HSPs)
chr5 (322-448)||(38394442-38394567)
chr5 (322-443)||(5002154-5002274)
chr5 (324-443)||(33478121-33478241)
chr5 (322-443)||(13789746-13789866)
chr5 (322-443)||(18473489-18473609)
chr5 (317-448)||(22101917-22102047)
chr5 (322-440)||(29299371-29299489)
chr5 (362-443)||(1248883-1248964)
chr5 (322-443)||(11931983-11932104)
chr5 (322-443)||(1138232-1138351)
chr5 (332-446)||(10228087-10228204)
chr5 (322-443)||(21488297-21488417)
chr5 (338-443)||(36286073-36286177)
chr5 (324-443)||(3813984-3814103)
chr5 (335-446)||(34297185-34297295)
chr5 (366-443)||(13664960-13665036)
chr5 (322-422)||(18718252-18718355)
chr5 (318-414)||(36434720-36434816)
chr5 (344-439)||(919660-919754)
chr5 (321-443)||(16619030-16619152)
chr5 (319-405)||(8235428-8235514)
chr5 (334-434)||(32452252-32452350)
chr5 (361-435)||(18391520-18391593)
chr5 (321-443)||(32902782-32902903)
chr5 (322-439)||(15968325-15968440)
chr5 (322-439)||(27488361-27488476)
chr5 (322-446)||(29031048-29031170)
chr5 (322-421)||(14913141-14913240)
chr5 (322-439)||(1015174-1015289)
chr5 (322-439)||(22731277-22731392)
chr5 (322-414)||(39239808-39239901)
chr5 (322-414)||(38362393-38362485)
chr5 (325-440)||(20502104-20502218)
chr5 (344-398)||(1420715-1420769)
chr5 (332-398)||(14723410-14723476)
chr5 (322-400)||(26313320-26313398)
chr5 (325-444)||(19295970-19296089)
chr5 (325-413)||(24173463-24173551)
chr5 (326-414)||(30780084-30780172)
chr5 (325-440)||(29002759-29002873)
chr5 (325-440)||(33970674-33970788)
chr5 (325-440)||(38978759-38978873)
chr5 (325-415)||(35154165-35154255)
chr5 (333-371)||(42069773-42069811)
chr5 (322-371)||(6499995-6500044)
chr5 (323-364)||(6604414-6604455)
chr5 (322-443)||(12094252-12094371)
chr5 (381-438)||(14221864-14221920)
chr5 (326-415)||(25408557-25408646)
chr5 (322-363)||(26163975-26164016)
[»] chr3 (51 HSPs)
chr3 (322-446)||(21662900-21663023)
chr3 (322-447)||(35099065-35099189)
chr3 (322-443)||(45010764-45010884)
chr3 (322-443)||(53441921-53442041)
chr3 (324-440)||(12064926-12065041)
chr3 (322-446)||(23222969-23223091)
chr3 (322-447)||(36985170-36985294)
chr3 (322-447)||(37010609-37010733)
chr3 (322-456)||(44518050-44518182)
chr3 (322-437)||(12747717-12747831)
chr3 (325-443)||(25910205-25910322)
chr3 (322-448)||(43448972-43449097)
chr3 (322-443)||(51516972-51517091)
chr3 (322-443)||(54537457-54537577)
chr3 (319-443)||(52864962-52865085)
chr3 (373-443)||(9197095-9197164)
chr3 (322-443)||(43343455-43343580)
chr3 (322-439)||(49885393-49885508)
chr3 (322-443)||(51723392-51723512)
chr3 (322-410)||(53357334-53357423)
chr3 (332-444)||(25954035-25954146)
chr3 (322-444)||(19649592-19649713)
chr3 (322-448)||(33808319-33808443)
chr3 (321-410)||(40460358-40460448)
chr3 (366-443)||(13622501-13622577)
chr3 (325-446)||(9236103-9236224)
chr3 (322-439)||(29457858-29457973)
chr3 (322-422)||(33371875-33371974)
chr3 (327-415)||(48593161-48593249)
chr3 (354-436)||(2544504-2544586)
chr3 (343-413)||(32711245-32711315)
chr3 (343-443)||(8266268-8266365)
chr3 (322-443)||(28406481-28406601)
chr3 (321-446)||(40198406-40198530)
chr3 (324-397)||(47505231-47505304)
chr3 (308-400)||(7136812-7136903)
chr3 (325-440)||(43901598-43901712)
chr3 (322-400)||(5177822-5177899)
chr3 (378-447)||(20028481-20028548)
chr3 (318-443)||(19649589-19649713)
chr3 (321-446)||(40198408-40198532)
chr3 (321-405)||(28043417-28043501)
chr3 (350-385)||(16295428-16295463)
chr3 (325-440)||(27302096-27302210)
chr3 (325-440)||(44118200-44118314)
chr3 (384-438)||(23920678-23920731)
chr3 (324-414)||(29290794-29290884)
chr3 (336-386)||(43014483-43014533)
chr3 (326-415)||(27707192-27707281)
chr3 (325-374)||(46220383-46220432)
chr3 (325-374)||(50660020-50660069)
[»] scaffold0136 (1 HSPs)
scaffold0136 (321-446)||(16542-16666)
[»] scaffold0001 (1 HSPs)
scaffold0001 (322-443)||(156782-156902)
[»] scaffold0236 (1 HSPs)
scaffold0236 (345-431)||(16677-16762)
[»] scaffold0110 (1 HSPs)
scaffold0110 (321-443)||(1547-1667)
[»] scaffold0002 (1 HSPs)
scaffold0002 (321-415)||(423261-423355)
[»] scaffold0778 (1 HSPs)
scaffold0778 (345-443)||(5286-5382)
[»] scaffold0086 (1 HSPs)
scaffold0086 (360-431)||(1489-1558)
[»] scaffold0767 (1 HSPs)
scaffold0767 (321-387)||(3736-3802)
[»] scaffold0023 (1 HSPs)
scaffold0023 (327-413)||(112866-112952)
[»] scaffold0242 (1 HSPs)
scaffold0242 (322-439)||(16521-16637)
[»] scaffold0238 (1 HSPs)
scaffold0238 (343-413)||(2539-2609)
[»] scaffold0070 (1 HSPs)
scaffold0070 (322-403)||(40159-40240)
[»] scaffold0018 (1 HSPs)
scaffold0018 (318-411)||(183837-183930)


Alignment Details
Target: chr2 (Bit Score: 540; Significance: 0; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 540; E-Value: 0
Query Start/End: Original strand, 13 - 899
Target Start/End: Complemental strand, 35728913 - 35728024
Alignment:
Q  13 cataccaactgaactaagctcacaataactgtataaatagattaatataatgcacgcaacaccttaataatgtttctattttcatattttagtacacatg 112  Q
    ||||||| |||| | |||||||| | |||||||||| ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  35728913 cataccagctgagccaagctcacgagaactgtataagtagtttaatgtaatgcacacaacaccttaataatgtttctattttcatattttagtacgcatg 35728814  T
Q  113 taaccataatcatcatcattaattaa-----atcactaaataagagttaatcaattactcaaactttggacaatgtgagaaatgagacattctctatttg 207  Q
    || |||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35728813 tacccataatcatcatcattaattaatttaaatcactaaataagagttaatcaattactcaaactttggacaatgtgagaaatgagacattctctattta 35728714  T
Q  208 tcaccaatgactattgtatcataactcaatcgaactcaatctcacactcctacctcaaataagttttt-attatgtaataaaattgtgcgcttgtagtct 306  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||    
T  35728713 tcaccgatgactattgtattataactcaatcgaactcaatctcacactcctacctcaaataagttttttattatgtaataaaattgtgcgcttgtagcct 35728614  T
Q  307 actccctccaagttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatg 406  Q
    ||||||| || ||| ||||||||| ||||| |||  |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35728613 actcccttca-gttctatttataaaaaaaatttggctttttaaattcattgaataattgatgtatcttgtttagaatatagaccaaatatatcatttatg 35728515  T
Q  407 caatgaatcagaaaaagttaaatgtttcttataaataagatcagaaggaatatcataattctagagtatgatgtatacgtggagtgaataggaagaaatg 506  Q
    |||||||||| ||||  | |||| ||||||||||||| |||  || |||||||||||| ||||||||||||||||   ||| ||||||||||||||||||    
T  35728514 caatgaatcaaaaaagatcaaatatttcttataaataggatatgagggaatatcataactctagagtatgatgta---gtgaagtgaataggaagaaatg 35728418  T
Q  507 agaaaaagtttagaaaagttatgaatactgcacacacttacttgatatgatcacataagttttatacactttataatctttattgatttacatttgacag 606  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  35728417 agaaaaagtttagaaaagttatgaatactgcacacacttacttgatatgatcacataagttttatacactttataatctttattaatttacatttgacaa 35728318  T
Q  607 ccaaatcaagttgtaattac-aacataaaagagaaactaaatatagaaaccaacaactaactaactaacttccttt---nnnnnnnnccactaactaact 702  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| |||||    ||||||||||||||||||           ||| |||||||||    
T  35728317 ccaaatcaagttgtaattacaaacataaaagagaaactaaatatagaagccaac----aactaactaacttcctttaaaaaaaaaaaccattaactaact 35728222  T
Q  703 tgtgcatgaagcaacaaacttttctatcataattaactaacttttaacttcnnnnnnnnnnnnnnnnnnncataggttcaatttactt-aggtaatccaa 801  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||                   |||||||||||||||||| |||||||||||    
T  35728221 tgtgcatgaagcaacaaacttttctaacataattaactaacttttaacttctttttttgtttttgattttcataggttcaatttacttgaggtaatccaa 35728122  T
Q  802 atcgaagttaaatgtaagtatcttttccaggtgatattcgaacactaattttccctttgtggctgctaaacctagttccagttggttttctctttctt 899  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| ||||||| ||| |||||||||||||    
T  35728121 atcgaagttaaatgtaagtatctttttcaggtgatattcgaacactaatttgcccattgtggctgctaaacccagttccaattgattttctctttctt 35728024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 899 - 1015
Target Start/End: Complemental strand, 35727982 - 35727865
Alignment:
Q  899 tgaaattttctcattcattttatatcctgcgtcacaacatcttttaatacatttgacaatggtaggtgaaaaataatttttcagttaattagatagacga 998  Q
    ||||||||||||||||||||||||| ||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  35727982 tgaaattttctcattcattttatattctgtgtcacaacatctcttaatacatttgacaatgataggtgaaaaataatttttcagttaattagatagacga 35727883  T
Q  999 gg-aggttagcaacactc 1015  Q
    || |||||||||||||||    
T  35727882 ggaaggttagcaacactc 35727865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 322 - 440
Target Start/End: Complemental strand, 41153245 - 41153128
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  41153245 tatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttatgcaatgaatca-aaaa 41153147  T
Q  422 agttaaatgtttcttataa 440  Q
    ||| |||||||||||||||    
T  41153146 agtcaaatgtttcttataa 41153128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 318 - 443
Target Start/End: Complemental strand, 29169973 - 29169849
Alignment:
Q  318 gttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcag 417  Q
    ||||||||||||||||||| |||| |||||||||||||||| |||||||| ||| |||||||||||||||| |||||||||||||||  |||||||| |     
T  29169973 gttttatttataagaaaaatttgactttttaaatttattgagtaattgatatat-ttgtttagaatatagatcaaatacatcatttagacaatgaattaa 29169875  T
Q  418 aaaaagttaaatgtttcttataaata 443  Q
    ||||||| |||| |||||||||||||    
T  29169874 aaaaagtcaaatatttcttataaata 29169849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 323 - 443
Target Start/End: Complemental strand, 32457346 - 32457227
Alignment:
Q  323 atttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaa 422  Q
    |||||||||||||| |||| |||||| ||| ||| | ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||    
T  32457346 atttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatca-aaaaa 32457248  T
Q  423 gttaaatgtttcttataaata 443  Q
    || |||| |||||||||||||    
T  32457247 gtcaaatatttcttataaata 32457227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 317 - 448
Target Start/End: Complemental strand, 11030331 - 11030201
Alignment:
Q  317 agttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatca 416  Q
    |||| |||||||||||||||||| | |||||| ||| ||||| ||||||||||||||  | ||||||||||||||||||||||||||||| |||||||||    
T  11030331 agttctatttataagaaaaaattaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatca 11030232  T
Q  417 gaaaaagttaaatgtttcttataaataagatc 448  Q
     ||||||| |||||||||||||| ||| ||||    
T  11030231 -aaaaagtcaaatgtttcttatatataggatc 11030201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 20555272 - 20555391
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||  ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| |||||||   ||||    
T  20555272 tatttataagaaaaaattaattttttagatacattgaataattgatgtatcttgtctagaatatagaccaaatacattatttatgtaatgaat--aaaaa 20555369  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||||||||||||| ||||||||    
T  20555370 agttaaatgtttcctataaata 20555391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 322 - 446
Target Start/End: Complemental strand, 7943574 - 7943450
Alignment:
Q  322 tatttataagaaaaaa-ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||| ||| ||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||||| | |||    
T  7943574 tatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgtctacaatatagaccaaatatatcatttatgcaatgaat-aaaaa 7943476  T
Q  421 aagttaaatgtttcttataaataaga 446  Q
    |||| |||| | ||||||||||||||    
T  7943475 aagtcaaatatctcttataaataaga 7943450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 322 - 448
Target Start/End: Complemental strand, 4410912 - 4410786
Alignment:
Q  322 tatttataagaaaaaa-ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||| ||| ||||  ||||| |||||||||||||| |||||||| ||||||||||||||||||||| ||||| |||    
T  4410912 tatttataagaaaaaagttgactttttagattcattgtgtaattaatgtatcttgtttaaaatatagatcaaatacatcatttatgcaataaatca-aaa 4410814  T
Q  421 aagttaaatgtttcttataaataagatc 448  Q
    | ||||||||||||||||||||| ||||    
T  4410813 aggttaaatgtttcttataaataggatc 4410786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 12962718 - 12962839
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||| ||| ||||| ||||| |||||  | || || |||||||||||||||||||||||||||||||||||| |||    
T  12962718 ttatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatgcaatgaatca-aaa 12962816  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| ||||||||||||||||||    
T  12962817 aagtcaaatgtttcttataaata 12962839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 38983133 - 38983013
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||| ||||| |||| |||||| ||| ||||  ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||    
T  38983133 tatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatgaatca-aaaa 38983035  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| ||| |||||||||    
T  38983034 agtcaaatattttttataaata 38983013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 29988905 - 29989026
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||| |||||||||| |||||| ||| ||||  ||||| || ||| |||| ||||||||||| ||||||||||||||||||||||||||| |||    
T  29988905 ttatttataaaaaaaaattgattttttatattcattgtgtaattaatatattttgtctagaatatagatcaaatacatcatttatgcaatgaatca-aaa 29989003  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| ||||||||||| ||||||    
T  29989004 aagtcaaatgtttcttctaaata 29989026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 11794463 - 11794583
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||||||||||||||| |||||  | || |||||| |||| |||||||||||||||||| ||||| || ||||    
T  11794463 tatttataagaaaaaattgattttttagatttattgaataattaatgtacttggtatagaatgtagatcaaatacatcatttatgccatgaaaca-aaaa 11794561  T
Q  422 agttaaatgtttcttataaata 443  Q
     || ||||||||||||||||||    
T  11794562 tgtaaaatgtttcttataaata 11794583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 30758853 - 30758734
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| ||||||||||||||||| || | ||||||||||||||| |||||||||||||||| | ||||    
T  30758853 tatttataagaaaaatttgactttttagatt-attgagtaattgatgtatcttgtctaaagtatagaccaaatacaccatttatgcaatgaat-aaaaaa 30758756  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| |||||||||||||    
T  30758755 agtcaaatatttcttataaata 30758734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 317 - 443
Target Start/End: Complemental strand, 28249072 - 28248947
Alignment:
Q  317 agttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatca 416  Q
    |||| ||||||||||||||| |||| |||||| ||| ||| ||||||| |||||| | || |||||||||||| |||||||| ||||||||||| |||||    
T  28249072 agttctatttataagaaaaagttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatca 28248973  T
Q  417 gaaaaagttaaatgtttcttataaata 443  Q
     ||||||| |||| |||||||||||||    
T  28248972 -aaaaagtcaaatatttcttataaata 28248947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 33824363 - 33824484
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||||||| ||||| |||||||| |||||||| || |||||| |  ||||| ||||||||| ||||||||||| ||    
T  33824363 ttatttataagaaaaatttgactttttaaattcattgagtaattgatatatcttgtctaaaatatatattaaatatatcatttatacaatgaatcag-aa 33824461  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| |||| |||||||||||||    
T  33824462 aagtcaaatatttcttataaata 33824484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 30761392 - 30761512
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||| | |||| |||||| ||| ||||| ||||| || |||||||| |||||||||||| ||||||||  ||| |||||||||||| ||||    
T  30761392 tatttataagaaacatttgactttttacattcattgagtaattaatttatcttgtctagaatatagactaaatacatattttgtgcaatgaatca-aaaa 30761490  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  30761491 agtcaaatgtttcttataaata 30761512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 38554592 - 38554472
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||||||| ||||| ||||| |||||  | || ||||||||||||||||||||| ||||||| ||||||||| |||     
T  38554592 tatttataagaaaaagttaactttttaaattcattgagtaattaatgtacttggtatagaatatagaccaaatacattatttatgtaatgaatca-aaat 38554494  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  38554493 agtcaaatgtttcttataaata 38554472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 332 - 448
Target Start/End: Original strand, 28014297 - 28014412
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||||||| |||||| ||| |||| ||||||  |||||||||| || | |||||||||||||||||||||||||||||||| | |||| || ||||||    
T  28014297 aaaaaattgactttttagattcattgtataattattgtatcttgtctatagtatagaccaaatacatcatttatgcaatgaat-aaaaaaggtcaaatgt 28014395  T
Q  432 ttcttataaataagatc 448  Q
    |||||||||||| ||||    
T  28014396 ttcttataaataggatc 28014412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 322 - 446
Target Start/End: Complemental strand, 43714107 - 43713985
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||   |||| |||||| ||||| ||| ||||||||||||||||| || |||||||||||||||||| |||||| |||||||||| ||||    
T  43714107 tatttataagaaatttttgactttttagatttactgagtaattgatgtatcttgtcta-aatatagaccaaatacataatttattcaatgaatca-aaaa 43714010  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    | | || ||||||||||||||||||    
T  43714009 aatcaattgtttcttataaataaga 43713985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 321 - 443
Target Start/End: Complemental strand, 9152514 - 9152393
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    ||||||| |||||| |||||| |||||| ||| ||||| |||||||||||||| || || |||||||||||||||||||| ||||  ||||| ||| |||    
T  9152514 ttatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatttaatgactca-aaa 9152416  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| ||||||||||| ||||||    
T  9152415 aagtcaaatgtttcttgtaaata 9152393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 361 - 443
Target Start/End: Original strand, 28494757 - 28494838
Alignment:
Q  361 aattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||| ||||| | ||||||||||||||||||    
T  28494757 aattgatgtatattgtctagaatatagaccaaatatatcatttatgcaatgaatca-aaaaaatcaaatgtttcttataaata 28494838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 354 - 439
Target Start/End: Complemental strand, 3837512 - 3837428
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttata 439  Q
    ||||| |||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||| ||||| | ||||||||||||||    
T  3837512 attgagtaattgatctatcttgtttaaaatatagaccaaatacattatttatgcaatgaatca-aaaaaatcaaatgtttcttata 3837428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 12873739 - 12873857
Alignment:
Q  324 tttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaag 423  Q
    ||||||||||||| |||| |||||| ||| ||| | ||||| |||||| | || |||||||||||| |||||||||||||||||||||||||| | ||||    
T  12873739 tttataagaaaaagttgactttttagattcattaagtaattaatgtatttggtatagaatatagactaaatacatcatttatgcaatgaatca-ataaag 12873837  T
Q  424 ttaaatgtttcttataaata 443  Q
    | |||| ||| |||||||||    
T  12873838 tcaaatattttttataaata 12873857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 322 - 448
Target Start/End: Original strand, 10204941 - 10205065
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  || | |||||| ||| |||||  |||||||||||||||| || ||||||||| ||||||||||||||| |||||||||| |||     
T  10204941 tatttataagaaaatttt-actttttagattcattgagcaattgatgtatcttgtctaaaatatagactaaatacatcatttatacaatgaatca-aaag 10205038  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    ||| |||| ||||||||||||| ||||    
T  10205039 agtcaaatatttcttataaataggatc 10205065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 42698198 - 42698078
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||| ||||| |||| |||||| ||| ||||| |||||||||||||||| |||||||| |||||||| | || |||||| | |||||| | ||||    
T  42698198 tatttataaaaaaaatttgactttttagattcattgagtaattgatgtatcttgcttagaataaagaccaaacatattatttataccatgaat-aaaaaa 42698100  T
Q  422 agttaaatgtttcttataaata 443  Q
    || ||||| |||||||||||||    
T  42698099 agctaaatatttcttataaata 42698078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 323 - 439
Target Start/End: Original strand, 15384442 - 15384556
Alignment:
Q  323 atttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaa 422  Q
    ||||||||||||||||| | |||||| ||||||| ||||||||||||| || | || ||| |||||||||||||||||  ||| |||||||||| |||||    
T  15384442 atttataagaaaaaattaactttttagatttatttaataattgatgtacctagcttggaa-atagaccaaatacatcaactattcaatgaatca-aaaaa 15384539  T
Q  423 gttaaatgtttcttata 439  Q
    || || |||||||||||    
T  15384540 gtaaattgtttcttata 15384556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 325 - 448
Target Start/End: Complemental strand, 22333656 - 22333534
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtt-tagaatatagaccaaatacatcatttatgcaatgaatcagaaaaag 423  Q
    |||| |||||||||||| |||||| ||| ||||| ||||| || || |||| | || |||||||| ||||||||| ||||||||||||||||| ||||||    
T  22333656 ttattagaaaaaattgactttttagattcattgagtaattaatata-cttgatatataatatagatcaaatacattatttatgcaatgaatca-aaaaag 22333559  T
Q  424 ttaaatgtttcttataaataagatc 448  Q
    || ||||||||||||||||| ||||    
T  22333558 tttaatgtttcttataaataggatc 22333534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 332 - 439
Target Start/End: Complemental strand, 11182289 - 11182183
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||||| | |||||||||||||||| |||||||||||| |  | ||||||||  | ||||||||||||||||| ||||||||| ||||||| ||||||    
T  11182289 aaaaaattaactttttaaatttattgagtaattgatgtatatgatatagaatatgaatcaaatacatcatttatggaatgaatca-aaaaagtcaaatgt 11182191  T
Q  432 ttcttata 439  Q
    | ||||||    
T  11182190 tgcttata 11182183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 322 - 448
Target Start/End: Original strand, 5109377 - 5109502
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||||| ||||| |||||| | || |||||||||| | |||||||| |||||| |  ||||||| ||||    
T  5109377 tatttataagaaaaagttaactttttagattcattgagtaattaatgtatttggtatagaatataggctaaatacataatttatactttgaatca-aaaa 5109475  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    ||| |||| ||||||||||||||||||    
T  5109476 agtcaaatatttcttataaataagatc 5109502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 34447637 - 34447518
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||  ||||  ||||||||||| || |||||| ||||||||||| |||||||||||||| |  ||||    
T  34447637 tatttataagaaaaagttgattttttagattcattgtgtaatcaatgtatcttgtctaaaatataaaccaaatacattatttatgcaatgaa-ctaaaaa 34447539  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| |||||||||||||    
T  34447538 agtcaaat-tttcttataaata 34447518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45571044 - 45571159
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45571044 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45571141  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45571142 agtaaattgtttcttata 45571159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45574711 - 45574826
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45574711 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45574808  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45574809 agtaaattgtttcttata 45574826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45578378 - 45578493
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45578378 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45578475  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45578476 agtaaattgtttcttata 45578493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45582045 - 45582160
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45582045 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45582142  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45582143 agtaaattgtttcttata 45582160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45585712 - 45585827
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45585712 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45585809  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45585810 agtaaattgtttcttata 45585827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45589379 - 45589494
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45589379 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45589476  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45589477 agtaaattgtttcttata 45589494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45593046 - 45593161
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45593046 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45593143  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45593144 agtaaattgtttcttata 45593161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45596713 - 45596828
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45596713 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45596810  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45596811 agtaaattgtttcttata 45596828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45600380 - 45600495
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45600380 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45600477  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45600478 agtaaattgtttcttata 45600495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45604047 - 45604162
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45604047 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45604144  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45604145 agtaaattgtttcttata 45604162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45607714 - 45607829
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45607714 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45607811  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45607812 agtaaattgtttcttata 45607829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45611381 - 45611496
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45611381 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45611478  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45611479 agtaaattgtttcttata 45611496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45615048 - 45615163
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45615048 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45615145  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45615146 agtaaattgtttcttata 45615163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 336 - 436
Target Start/End: Original strand, 37670346 - 37670445
Alignment:
Q  336 aattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttct 435  Q
    |||||| |||||| || |||||||||||||||| ||||| | ||||||||| |||||||| || ||||||||||||||| | ||||| | ||||||||||    
T  37670346 aattgactttttagatatattgaataattgatgcatcttatctagaatatataccaaatagattatttatgcaatgaatta-aaaaaatcaaatgtttct 37670444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 6971587 - 6971701
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||| |||||| ||||||||||||||| |||||| |||||| |||||   ||||||||  | ||||||||||||  ||||||| |  |||||||    
T  6971587 ttataagaaacaattgactttttaaatttattgtataattaatgtatattgttataaatatagattagatacatcatttacacaatgaa-cctaaaaagt 6971685  T
Q  425 taaatgtttcttataa 440  Q
     |||||||||||||||    
T  6971686 caaatgtttcttataa 6971701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 36881547 - 36881661
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||  ||||| ||||| |||||||||      |||||||||||||| ||| ||||||| ||||||||| ||||    
T  36881547 tatttataagaaaaatttgactttttagatacattgagtaattaatgtatctt------aatatagaccaaattcattatttatgtaatgaatca-aaaa 36881639  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||| ||||||    
T  36881640 agtcaaatgtttcttgtaaata 36881661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 326 - 443
Target Start/End: Original strand, 39445013 - 39445129
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagtt 425  Q
    ||||||||||| |||| |||| | ||| ||||| |||||||||||| |||| |||||||||||  ||||||| |||||||||||| ||| | |||||||     
T  39445013 tataagaaaaatttgacttttaagattcattgagtaattgatgtattttgtctagaatatagattaaatacaccatttatgcaataaatta-aaaaagtc 39445111  T
Q  426 aaatgtttcttataaata 443  Q
    ||   |||||||||||||    
T  39445112 aataatttcttataaata 39445129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 319 - 444
Target Start/End: Original strand, 9121197 - 9121325
Alignment:
Q  319 ttttatttataagaaaaaattgagtttttaaatttattgaa----taattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    ||||||||||||||||||||||| ||||||||||||| |||    ||||||||| |||| | ||| ||||||||| ||||| |||| ||||   ||||||    
T  9121197 ttttatttataagaaaaaattgattttttaaatttatcgaataattaattgatgcatctggattataatatagactaaatatatcaattattttatgaat 9121296  T
Q  415 cagaaaaagttaaatgtttcttataaataa 444  Q
    |  ||||| |||| ||||| ||||||||||    
T  9121297 c-taaaaaattaattgtttattataaataa 9121325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 354 - 446
Target Start/End: Original strand, 39118060 - 39118151
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataaga 446  Q
    ||||| |||||||| |||||| | ||||||||||||||||||||| |||||| |||| ||||| ||||||| || | ||| ||||||||||||    
T  39118060 attgagtaattgatatatcttatctagaatatagaccaaatacataatttatacaataaatca-aaaaagtcaactattttttataaataaga 39118151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 5281311 - 5281213
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| |||   ||||| |||||| | || || |||||||| ||||||||||||||||||||||||||| ||||    
T  5281311 tatttataagaaaaagttgactttttatatt-attttgtaattaatgtatttggtataaaatatagatcaaatacatcatttatgcaatgaatcaaaaaa 5281213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 448
Target Start/End: Complemental strand, 4044708 - 4044584
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |  | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  4044708 tatttataagaaaaagtaaaatttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 4044611  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    ||| || ||||||||||| ||| ||||    
T  4044610 agtaaattgtttcttatatataggatc 4044584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 9373543 - 9373450
Alignment:
Q  306 tactccctccaagttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatca 400  Q
    ||||||||| ||| |||||| |||||||| |||||| |||||||||| ||||||||||| | ||||||||||   ||||||||| | ||||||||    
T  9373543 tactccctctaagctttatt-ataagaaacaattgactttttaaattcattgaataattaacgtatcttgttgtaaatatagactacatacatca 9373450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 378 - 443
Target Start/End: Original strand, 2936363 - 2936427
Alignment:
Q  378 tagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    |||||||||||| ||||| ||||| ||| |||||||||| ||||||| ||||||||||||||||||    
T  2936363 tagaatatagactaaatatatcatctatccaatgaatca-aaaaagtcaaatgtttcttataaata 2936427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 3838551 - 3838436
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||| |||||||||  | || ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  3838551 tatttataagaaaaagttaactttttagattcattcaatgattgatgtacttcgtctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 3838454  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  3838453 agtaaattgtttcttata 3838436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 4063286 - 4063401
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| ||  | ||||| |||||| ||||||||||  ||| |||||||||| ||||    
T  4063286 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctactctagaa-atagacaaaatacatcaactattcaatgaatca-aaaa 4063383  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  4063384 agtaaattgtttcttata 4063401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 368 - 448
Target Start/End: Original strand, 5559572 - 5559652
Alignment:
Q  368 gtatcttgtttagaatatagaccaaa-tacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataagatc 448  Q
    |||| |||||||||||||| |||||| ||||||||||||||||||||||| ||||| | |||| | ||||||||||| ||||    
T  5559572 gtatattgtttagaatataaaccaaaatacatcatttatgcaatgaatca-aaaaaatcaaatatgtcttataaataggatc 5559652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 45034412 - 45034527
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| ||    ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  45034412 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 45034509  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  45034510 agtaaattgtttcttata 45034527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 382 - 442
Target Start/End: Original strand, 32487064 - 32487123
Alignment:
Q  382 atatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaat 442  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||||  |||||||||||    
T  32487064 atatagaccaaatacattatttatgcaatgaatca-aaaaagtcaaatacttcttataaat 32487123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 343 - 443
Target Start/End: Complemental strand, 33274083 - 33273984
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaat 442  Q
    |||||| ||| ||| | |||||||||||| |||| || ||||||  ||||||| ||||||||| |||||||||| ||||||| |||  ||||||||||||    
T  33274083 tttttagattcattaagtaattgatgtatgttgtctaaaatataagccaaatatatcatttatacaatgaatca-aaaaagtcaaagttttcttataaat 33273985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 368 - 431
Target Start/End: Original strand, 920474 - 920536
Alignment:
Q  368 gtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||||||||||||||||||| |||||||| ||||||| ||| ||||| ||||||| ||||||    
T  920474 gtatcttgtttagaatatagactaaatacattatttatgaaataaatca-aaaaagtcaaatgt 920536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 3365406 - 3365292
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||| |||||| |||||  ||| ||||||||||| || |||||||||   ||||||||  | |||||||| |||| ||||||| |  |||||||    
T  3365406 ttataagaaataattgatttttttgattcattgaataattaatatatcttgttataaatatagattagatacatcacttatacaatgaa-cctaaaaagt 3365308  T
Q  425 taaatgtttcttataa 440  Q
    ||||| ||||||||||    
T  3365307 taaatttttcttataa 3365292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 329 - 440
Target Start/End: Complemental strand, 27311704 - 27311594
Alignment:
Q  329 aagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaa 428  Q
    |||||| |||||| |||||| ||||||||||||||| | ||||||||||   ||||||||| | ||| ||||||| | ||||||| |  ||||||| ||     
T  27311704 aagaaacaattgattttttagatttattgaataattaacgtatcttgttataaatatagactagatatatcatttgtacaatgaa-cctaaaaagtcaat 27311606  T
Q  429 tgtttcttataa 440  Q
    ||||||||||||    
T  27311605 tgtttcttataa 27311594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 378 - 460
Target Start/End: Original strand, 12486062 - 12486143
Alignment:
Q  378 tagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataagatcagaaggaatatc 460  Q
    ||||||||||||||||||||||| |||| |||||||||  ||||||| || |||||||| |||||| || |||| ||| ||||    
T  12486062 tagaatatagaccaaatacatcaattattcaatgaatc-taaaaagtcaattgtttcttgtaaataggaccagagggagtatc 12486143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 41205503 - 41205580
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacat 398  Q
    |||||||||||| ||| |||| |||||| || |||||||||||| |||||||| ||  | |||||| |||||||||||    
T  41205503 ttatttataagagaaagttgattttttagatatattgaataatttatgtatctagtaaaaaatataaaccaaatacat 41205580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 6971513 - 6971565
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtt 377  Q
    |||||||||| |||||| ||||||||||||||| |||||| |||||| |||||    
T  6971513 ttataagaaacaattgactttttaaatttattgtataattaatgtatattgtt 6971565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 323 - 451
Target Start/End: Complemental strand, 40691264 - 40691137
Alignment:
Q  323 atttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaa 422  Q
    |||||||||| ||| || | |||| | ||||||| ||||| |||||||||| ||||  ||||||||| | |||| ||||||||  |||| |||  |||||    
T  40691264 atttataagagaaagttaacttttcagatttattcaataaatgatgtatctagtttctaatatagactagatacgtcatttattgaatggatct-aaaaa 40691166  T
Q  423 gttaaatgtttcttataaataagatcaga 451  Q
    ||||| | | | |||||||||||||||||    
T  40691165 gttaactttcttttataaataagatcaga 40691137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 448
Target Start/End: Original strand, 7833295 - 7833421
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||| ||||||||| |||  | |||||| ||| ||||||||||||||||||||  |||| |||||||| || |||||| |  |||  ||| ||||  |||    
T  7833295 ttatatataagaaacaatcaattttttagattcattgaataattgatgtatctgatttaaaatatagatcagatacattaactatttaataaatc-taaa 7833393  T
Q  421 aagttaaatgtttcttataaataagatc 448  Q
    || |||| ||||||||||| ||||||||    
T  7833394 aaattaagtgtttcttatatataagatc 7833421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 322 - 373
Target Start/End: Complemental strand, 37076279 - 37076228
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatct 373  Q
    ||||||||||||| ||| || |||||| |||||||| |||||||||||||||    
T  37076279 tatttataagaaacaatcgactttttagatttattggataattgatgtatct 37076228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 318 - 373
Target Start/End: Complemental strand, 41120093 - 41120039
Alignment:
Q  318 gttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatct 373  Q
    ||||||||||||||||| |||||| |||| | ||||||||||||||| ||||||||    
T  41120093 gttttatttataagaaacaattgactttt-atatttattgaataattaatgtatct 41120039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 394 - 436
Target Start/End: Original strand, 29060239 - 29060280
Alignment:
Q  394 tacatcatttatgcaatgaatcagaaaaagttaaatgtttctt 436  Q
    ||||||||||||||||||||||| || ||||||||||||||||    
T  29060239 tacatcatttatgcaatgaatca-aagaagttaaatgtttctt 29060280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 358 - 403
Target Start/End: Complemental strand, 12397161 - 12397116
Alignment:
Q  358 aataattgatgtatcttgtttagaatatagaccaaatacatcattt 403  Q
    ||||||||||||||||||| ||  ||||||||||||| ||||||||    
T  12397161 aataattgatgtatcttgtctaagatatagaccaaatgcatcattt 12397116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 12486126 - 12486077
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtat 371  Q
    |||||| |||||| |||||| |||||| ||| ||||||||||||||||||    
T  12486126 tatttacaagaaacaattgactttttagattcattgaataattgatgtat 12486077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 2e-45; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 28677451 - 28677331
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  28677451 tatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatca-aaaa 28677353  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  28677352 agtcaaatgtttcttataaata 28677331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 322 - 441
Target Start/End: Complemental strand, 36245510 - 36245392
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  36245510 tatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatca-aaaa 36245412  T
Q  422 agttaaatgtttcttataaa 441  Q
    ||| ||||||||||||||||    
T  36245411 agtcaaatgtttcttataaa 36245392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 8566215 - 8566099
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  8566215 tatttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatca-aaaa 8566117  T
Q  422 agttaaatgtttcttata 439  Q
    ||||||||||||||||||    
T  8566116 agttaaatgtttcttata 8566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 11668149 - 11668029
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| ||||    
T  11668149 tatttataagaaaaatttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatca-aaaa 11668051  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  11668050 agtcaaatgtttcttataaata 11668029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 322 - 448
Target Start/End: Original strand, 6838391 - 6838514
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| ||| |||||| | || ||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  6838391 tatttataagaaaaatttg-gtttttga-ttcattgagtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatca-aaaa 6838487  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    ||| |||||||||||||||||||||||    
T  6838488 agtcaaatgtttcttataaataagatc 6838514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 326 - 433
Target Start/End: Complemental strand, 40142903 - 40142797
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagtt 425  Q
    |||||||||||||||| |||||| |||||||| |||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||     
T  40142903 tataagaaaaaattgattttttagatttattgtataattaatgtatcttgtttaggatatagaccaaatacattatttatgcaatgaatca-aaaaagtc 40142805  T
Q  426 aaatgttt 433  Q
    ||||||||    
T  40142804 aaatgttt 40142797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 41850609 - 41850730
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| || | |||||| ||| ||||||||||| |||||| | || || |||||||| ||||||||||||||||||||||||||| |||    
T  41850609 ttatttataagaaaaagttaattttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttatgcaatgaatca-aaa 41850707  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| ||||||||||||||||||    
T  41850708 aagtaaaatgtttcttataaata 41850730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 320 - 446
Target Start/End: Original strand, 45533242 - 45533367
Alignment:
Q  320 tttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaa 419  Q
    |||| ||||||||||||||||| |||||| ||| |||   ||||| ||||||||||| ||||||||||||||||||||| |||||| |||||||| | ||    
T  45533242 tttacttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaatta-aa 45533340  T
Q  420 aaagttaaatgtttcttataaataaga 446  Q
    ||||| |||||||||||||||||||||    
T  45533341 aaagtcaaatgtttcttataaataaga 45533367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 323 - 446
Target Start/End: Original strand, 2610202 - 2610323
Alignment:
Q  323 atttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaa 422  Q
    |||||||||||||| |||| |||||||||| ||||| |||||||||||| | || |||||||||||| ||||||||||||||||||||||||   |||||    
T  2610202 atttataagaaaaatttgattttttaaattcattgagtaattgatgtatttggtctagaatatagactaaatacatcatttatgcaatgaat--taaaaa 2610299  T
Q  423 gttaaatgtttcttataaataaga 446  Q
     || | ||||||||||||||||||    
T  2610300 attcattgtttcttataaataaga 2610323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 321 - 448
Target Start/End: Complemental strand, 9979935 - 9979810
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||| ||||||||| ||||| ||||||||||| |||||||| ||| |||||||||||||||| ||| ||||| |||    
T  9979935 ttatttataagaaaaatttgactttttagatttattgagtaattcatgtatcttgtctagaatattgactaaatacatcatttatg-aataaatca-aaa 9979838  T
Q  421 aagttaaatgtttcttataaataagatc 448  Q
     ||| |||| ||||||||||||||||||    
T  9979837 tagtcaaatatttcttataaataagatc 9979810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 10007710 - 10007588
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat-cagaaa 420  Q
    ||||||||||||||| |||| |||||| ||| |||| |||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||||  | |||    
T  10007710 tatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataatttatgaaatgaataaaaaaa 10007611  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| |||||||| |||||||||    
T  10007610 aagtcaaatgtttattataaata 10007588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 326 - 443
Target Start/End: Complemental strand, 29365751 - 29365635
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagtt 425  Q
    |||||||||||||||| |||||| ||| ||||| ||||| |||||| | || ||||||||||| |||||||||||||||||||||| || | |||||||     
T  29365751 tataagaaaaaattgactttttagattcattgagtaattaatgtatttggtatagaatatagatcaaatacatcatttatgcaatgtatta-aaaaagtc 29365653  T
Q  426 aaatgtttcttataaata 443  Q
    ||||||||||||||||||    
T  29365652 aaatgtttcttataaata 29365635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 30869320 - 30869200
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  |||| |||||| ||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||||| |||| ||||| ||||    
T  30869320 tatttataagaaaattttgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacattatttatacaataaatca-aaaa 30869222  T
Q  422 agttaaatgtttcttataaata 443  Q
     || ||||||||| ||||||||    
T  30869221 cgtcaaatgtttcatataaata 30869200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 355 - 451
Target Start/End: Complemental strand, 2400053 - 2399958
Alignment:
Q  355 ttgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataagatcaga 451  Q
    ||||||||||||||||||| || || ||||||||  ||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  2400053 ttgaataattgatgtatctagtctaaaatatagattaaatacatcatttatacaatgaatca-aaaaagtcaaatgtttcttataaataagatcaga 2399958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 322 - 446
Target Start/End: Complemental strand, 2523904 - 2523781
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| ||||| |||||  | |  |||||||||||||| ||||||| |||||||||||||||| ||||    
T  2523904 tatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggcatagaatatagaccagatacatcgtttatgcaatgaatca-aaaa 2523806  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    ||| |||||||||||||||||||||    
T  2523805 agtcaaatgtttcttataaataaga 2523781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 326 - 414
Target Start/End: Complemental strand, 34118069 - 34117981
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    ||||||||||| |||| |||||||||| ||||  ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  34118069 tataagaaaaagttgactttttaaattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaat 34117981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 332 - 443
Target Start/End: Original strand, 24163293 - 24163403
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||||| | |||||| ||| |||| |||||| ||||||||||  |||||||||||||| |||||||||||||||||||||| | ||||||| ||||||    
T  24163293 aaaaaatttactttttagattcattgtataattaatgtatcttgcgtagaatatagaccatatacatcatttatgcaatgaatta-aaaaagtgaaatgt 24163391  T
Q  432 ttcttataaata 443  Q
    ||||||||||||    
T  24163392 ttcttataaata 24163403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 332 - 443
Target Start/End: Complemental strand, 39153411 - 39153301
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||||||| ||||||  || ||||| |||||||||||| | || || ||||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  39153411 aaaaaattgactttttagcttcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatca-aaaaagtcaaatgt 39153313  T
Q  432 ttcttataaata 443  Q
    ||||||||||||    
T  39153312 ttcttataaata 39153301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 304 - 448
Target Start/End: Complemental strand, 2681010 - 2680867
Alignment:
Q  304 tctactccctccaagttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtt-tagaatatagaccaaatacatcatt 402  Q
    ||||||||||||| ||| ||||||||| ||||| |||| |||||| |||||||| |||||  |||||||||  | ||||||||||| |||||||||||||    
T  2681010 tctactccctcca-gttctatttataaaaaaaagttgactttttagatttattgtataatgaatgtatctttctctagaatatagatcaaatacatcatt 2680912  T
Q  403 tatgcaatgaatcagaaaaagttaaatgtttcttataaataagatc 448  Q
    |||  ||||||||| ||||||| |||| ||||||||||||| ||||    
T  2680911 tatataatgaatca-aaaaagtcaaatatttcttataaataggatc 2680867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 13807255 - 13807372
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||| ||| ||||| ||||||||    ||| ||||||||||||| |||||| |||||||||| ||||||||| |||    
T  13807255 ttatttataagaaaaagttgactttttagattcattgagtaattgat----cttctttagaatatagatcaaatatatcatttatgtaatgaatca-aaa 13807349  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| ||||||||||||||||||    
T  13807350 aagtcaaatgtttcttataaata 13807372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 10462390 - 10462510
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    ||||||||||||||||  ||| |||||| ||| ||||| | ||||||||||||||| || |||||| |||||||||||||||||||||||||||   |||    
T  10462390 ttatttataagaaaaatgtgactttttagattcattgagtgattgatgtatcttgtctaaaatatataccaaatacatcatttatgcaatgaat--aaaa 10462487  T
Q  421 aagttaaatgtttcttataaata 443  Q
    ||  | |||||||||||||||||    
T  10462488 aatgtcaatgtttcttataaata 10462510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 45441568 - 45441450
Alignment:
Q  324 tttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaag 423  Q
    ||||||| |||||||| | |||||| ||| | |||||||||| |||||||||| ||||||||||| |||||||||||| ||| |||| ||||| ||||||    
T  45441568 tttataaaaaaaaattaactttttagattcaatgaataattggtgtatcttgtctagaatatagatcaaatacatcatctatacaataaatca-aaaaag 45441470  T
Q  424 ttaaatgtttcttataaata 443  Q
    | |||| |||| ||||||||    
T  45441469 tcaaatatttcatataaata 45441450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 47987196 - 47987256
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    |||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||||    
T  47987196 attgaataattgatatatcttgtttagagtataaaccaaatacatcatttatgcaatgaat 47987256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 322 - 421
Target Start/End: Original strand, 44682580 - 44682679
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||| | ||| ||| | ||| |||||||| |||| |||| ||||||||||||| |||||||||||||||||||| ||||    
T  44682580 tatttataagaaaaatttgacttttgagattcattaagtaactgatgtattttgtctagattatagaccaaatatatcatttatgcaatgaatcaaaaaa 44682679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 343 - 446
Target Start/End: Original strand, 48838347 - 48838449
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaat 442  Q
    |||||| ||| |||||  |||| |||||| | || || |||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||     
T  48838347 tttttagattcattgagcaattaatgtatttggtataaaatatagaccaaatacatcatttatgtaatgaatta-aaaaagttaaatgtttcttataaaa 48838445  T
Q  443 aaga 446  Q
    ||||    
T  48838446 aaga 48838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 332 - 442
Target Start/End: Complemental strand, 40176160 - 40176051
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||||||| |||||| ||| ||| |  |||| |||||  | |||||||||||||||||||||||||||||| ||||||||| | ||||||| ||||||    
T  40176160 aaaaaattgactttttagattcattaagaaattaatgtacttggtttagaatatagaccaaatacatcatttaagcaatgaat-aaaaaaagtgaaatgt 40176062  T
Q  432 ttcttataaat 442  Q
    || ||||||||    
T  40176061 tttttataaat 40176051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 48082812 - 48082932
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||| ||| ||||  ||||| ||||||| ||| ||||||||||| |||||||| |||||||| ||||||| | |||    
T  48082812 ttatttataagaaaaagttgactttttagattcattgtgtaattaatgtatcatgtgtagaatataga-caaatacaccatttatgtaatgaat-aaaaa 48082909  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| |||| ||| |||||||||    
T  48082910 aagtcaaatatttattataaata 48082932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 4925905 - 4926025
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||| | ||||||||||| ||||| || ||||||||| ||||| ||||||| |||||| |||||  |||    
T  4925905 tatttataagaaaaatttgactttttagattcattaagtaattgatgtaacttgtctaaaatatagactaaatatatcatttgtgcaataaatca-taaa 4926003  T
Q  422 agttaaatgtttcttataaata 443  Q
    |||  ||||||| |||||||||    
T  4926004 agtcgaatgtttattataaata 4926025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 323 - 406
Target Start/End: Complemental strand, 32811842 - 32811759
Alignment:
Q  323 atttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatg 406  Q
    ||||||||||||||||| | |||||| ||| ||||| |||||||| ||| | || |||||||| ||||||||||||||||||||    
T  32811842 atttataagaaaaaattaattttttagattcattgagtaattgatttatatggtatagaatatggaccaaatacatcatttatg 32811759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 321 - 439
Target Start/End: Complemental strand, 1366729 - 1366613
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||| ||||||| || | |||||| ||| ||| ||||||||||||| || ||| |||| |||||||||||||||||  ||| |||||||||| |||    
T  1366729 ttatttatcagaaaaagttaactttttagattcattcaataattgatgtacctagttcagaa-atagaccaaatacatcaactattcaatgaatca-aaa 1366632  T
Q  421 aagttaaatgtttcttata 439  Q
    |||| || |||||||||||    
T  1366631 aagtaaattgtttcttata 1366613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 321 - 443
Target Start/End: Complemental strand, 28020134 - 28020015
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||| |||||||||| |||||| ||| ||| |||||||| |||||||    ||||| |||||||||||||||||  ||| |||||||||| |||    
T  28020134 ttatttataa-aaaaaattgattttttagattcattaaataattgttgtatctgacctagaa-atagaccaaatacatcaactattcaatgaatca-aaa 28020038  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| || |||||||||||||||    
T  28020037 aagtaaattgtttcttataaata 28020015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 322 - 448
Target Start/End: Complemental strand, 32811511 - 32811387
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| | ||||||||||| || |  ||||| ||||||||||||||||| |||| |||||||||| ||||    
T  32811511 tatttataagaaaaagttaattttttagattcattcagtaattgatgtacctagcctagaa-atagaccaaatacatcaattattcaatgaatca-aaaa 32811414  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    ||| || ||||||||||| ||| ||||    
T  32811413 agtaaattgtttcttatatataggatc 32811387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 322 - 438
Target Start/End: Complemental strand, 27231967 - 27231853
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  27231967 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 27231870  T
Q  422 agttaaatgtttcttat 438  Q
    ||| || ||||||||||    
T  27231869 agtaaattgtttcttat 27231853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 41395793 - 41395679
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| |||||| ||| || |||||||| || |||||| ||   ||||||||| | |||||||| |||| |||||||| | |||||||    
T  41395793 ttataagaaaaagttgactttttagattcatagaataattaatatatcttattataaatatagactagatacatcacttatacaatgaatta-aaaaagt 41395695  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  41395694 taattgtttcttataa 41395679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 332 - 439
Target Start/End: Complemental strand, 42457103 - 42456998
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||||| | |||||| ||||||| ||||||||||||| || | |||||| |||||||||||||||||  ||| |||||||||| ||||||| ||  ||    
T  42457103 aaaaaattaactttttagatttattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactattcaatgaatca-aaaaagtaaatcgt 42457006  T
Q  432 ttcttata 439  Q
    ||||||||    
T  42457005 ttcttata 42456998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 338 - 440
Target Start/End: Complemental strand, 7456537 - 7456436
Alignment:
Q  338 ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttctta 437  Q
    |||| |||||| ||| ||||| ||||| ||||||||||||   ||||||||| | ||||||||||||| |||||||||  ||||||| |||| |||||||    
T  7456537 ttgactttttagattcattgagtaattaatgtatcttgttgtaaatatagactagatacatcatttatacaatgaatc-taaaaagtcaaatatttctta 7456439  T
Q  438 taa 440  Q
    |||    
T  7456438 taa 7456436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 373 - 443
Target Start/End: Original strand, 28298919 - 28298988
Alignment:
Q  373 ttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    |||||||||||||||| |||||| |  ||||||||||||||||| ||||||| |||||||| |||||||||    
T  28298919 ttgtttagaatatagatcaaatatactatttatgcaatgaatca-aaaaagtcaaatgttttttataaata 28298988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 439
Target Start/End: Original strand, 31227506 - 31227622
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| || | |||||| ||| ||| |||| ||||||||| | |  ||||| |||||||||||||||||  ||| |||||||||| |||    
T  31227506 ttatttataagaaaaagttaattttttagattcattcaatagttgatgtatttagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaa 31227603  T
Q  421 aagttaaatgtttcttata 439  Q
    |||| || |||||||||||    
T  31227604 aagtaaattgtttcttata 31227622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 4826776 - 4826891
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| |||||||||||||  | |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  4826776 tatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 4826873  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  4826874 agtaaattgtttcttata 4826891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 414
Target Start/End: Original strand, 30823723 - 30823815
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    ||||||||||||||  |||| |||||| ||| |||||  |||| |||||| | || ||||||||||||||||||||| ||||||  |||||||    
T  30823723 tatttataagaaaattttgactttttagattcattgagaaattaatgtatttggtatagaatatagaccaaatacattatttatataatgaat 30823815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 414
Target Start/End: Original strand, 45981022 - 45981113
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    |||||||||||||||||||| |||| ||||| ||||||||| | ||||||||  | |||| |||| || |||||||||||| ||| |||||||    
T  45981022 tatttataagaaaaaattgactttt-aaattcattgaataactcatgtatctgatctagagtatatacaaaatacatcattaatgtaatgaat 45981113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 446
Target Start/End: Complemental strand, 47942971 - 47942848
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||   |||| |||||||||||||| ||||||| |||||| |||| || |||||| |  ||||| || ||| || |||||||||| ||||    
T  47942971 tatttataagaaatttttgactttttaaatttattaaataattaatgtattttgtctaaaatataaattaaatatattattcatacaatgaatca-aaaa 47942873  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    ||| |||| |||  |||||||||||    
T  47942872 agtgaaatattttatataaataaga 47942848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 446
Target Start/End: Complemental strand, 47948401 - 47948278
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||   |||| |||||||||||||| ||||||| |||||| |||| || |||||| |  ||||| || ||| || |||||||||| ||||    
T  47948401 tatttataagaaatttttgactttttaaatttattaaataattaatgtattttgtctaaaatataaattaaatatattattcatacaatgaatca-aaaa 47948303  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    ||| |||| |||  |||||||||||    
T  47948302 agtgaaatattttatataaataaga 47948278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 347 - 422
Target Start/End: Original strand, 7430083 - 7430158
Alignment:
Q  347 taaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaa 422  Q
    |||||| | ||||||||| |||||| | ||||| ||||||||||| |||||||| ||||  |||||||||||||||    
T  7430083 taaattcagtgaataatttatgtatttggtttacaatatagaccagatacatcagttatttaatgaatcagaaaaa 7430158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 33901055 - 33901169
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||| |||||| |||||  ||| || ||||| || ||||||||||||   ||||||||| | ||||||||||||   ||||||||  |||||||    
T  33901055 ttataagaaacaattgatttttttgattcatagaatagttaatgtatcttgttataaatatagactagatacatcatttacataatgaatc-taaaaagt 33901153  T
Q  425 taaatgtttcttataa 440  Q
     |||||||||||||||    
T  33901154 caaatgtttcttataa 33901169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 415
Target Start/End: Complemental strand, 30486715 - 30486621
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    ||||||||||| |||  |||| |||||| ||||||||||||| |||||||| | || ||  ||||| |||| |||||| |||||| |||||||||    
T  30486715 ttatttataagtaaattttgactttttagatttattgaataaatgatgtatgtggtgtatgatatataccacatacattatttattcaatgaatc 30486621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 41863715 - 41863661
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgt 376  Q
    |||||||||||||||||||| |||||||||| ||||  ||||| |||||||||||    
T  41863715 tatttataagaaaaaattgactttttaaattcattgtgtaattaatgtatcttgt 41863661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 413
Target Start/End: Complemental strand, 27163296 - 27163204
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaa 413  Q
    ||||||||||| |||  || | |||||| ||| | | ||||| |||||||| | ||||| ||||||||||| ||||||||||||| |||||||    
T  27163296 ttatttataagtaaattttcactttttagattcactaaataaatgatgtatgtggtttataatatagaccacatacatcatttattcaatgaa 27163204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 377
Target Start/End: Complemental strand, 45058144 - 45058088
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtt 377  Q
    |||||||||||||| |||||  ||||||||| ||| |||||||| ||||||||||||    
T  45058144 ttatttataagaaacaattgtatttttaaatatatagaataattaatgtatcttgtt 45058088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 332 - 440
Target Start/End: Complemental strand, 47280297 - 47280191
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    ||||| |||| ||||||  || || |||||||| ||||||||| ||   ||||||||| |||||||| |||||| ||||||| || |||||||||| |||    
T  47280297 aaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactaaatacattatttatacaatgaa-ca-aaaaagttaattgt 47280200  T
Q  432 ttcttataa 440  Q
    |||||||||    
T  47280199 ttcttataa 47280191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 373
Target Start/End: Original strand, 19512749 - 19512796
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatct 373  Q
    ||||||||| |||||| |||||||||| ||||||||||||| ||||||    
T  19512749 tataagaaacaattgactttttaaattcattgaataattgacgtatct 19512796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 440
Target Start/End: Complemental strand, 40234876 - 40234783
Alignment:
Q  346 ttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataa 440  Q
    ||||||| ||||| ||||| ||||||||||||   ||||||||| | |||||||| |||  |||||||||  ||||||| || ||||||||||||    
T  40234876 ttaaattcattgagtaattcatgtatcttgttgtaaatatagactagatacatcagttacacaatgaatc-taaaaagtcaattgtttcttataa 40234783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 451
Target Start/End: Complemental strand, 26564055 - 26563927
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||| |||||| |||||| |||| | ||  ||||||||||| | |||||| || |||||| || ||||||||||| |||||| ||||  |||  ||||    
T  26564055 tatttacaagaaacaattgacttttcagatacattgaataatttacgtatctggtctagaatctaaaccaaatacataatttattcaatatatc-taaaa 26563957  T
Q  422 agttaaatgtttcttataaataagatcaga 451  Q
    |||||| || ||||| |||| | |||||||    
T  26563956 agttaattgcttcttgtaaaaaggatcaga 26563927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 6e-43; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 30191910 - 30192030
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  30191910 tatttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatca-aaaa 30192008  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||||||||||||||||||||||    
T  30192009 agttaaatgtttcttataaata 30192030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 48361066 - 48361186
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  48361066 tatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatca-aaaa 48361164  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  48361165 agtcaaatgtttcttataaata 48361186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 304 - 443
Target Start/End: Complemental strand, 44111896 - 44111759
Alignment:
Q  304 tctactccctccaagttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcattt 403  Q
    ||||||||||||  || |||||||||||||||| |||| |||||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  44111896 tctactccctccg-gtcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcattt 44111798  T
Q  404 atgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||| ||| ||||| ||||||| ||||||||||||||||||    
T  44111797 atgtaattaatca-aaaaagtcaaatgtttcttataaata 44111759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 50121450 - 50121571
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||||| | |||    
T  50121450 ttatttataagaaaaatttgactttttagatttattgaatgattgatgtatcttgtctagtatatagaccaaatatatcatttatgcaatgaatta-aaa 50121548  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| ||||||||||||||||||    
T  50121549 aagtcaaatgtttcttataaata 50121571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 48195904 - 48196024
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||| | | |||||||||| ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||| || ||||    
T  48195904 tatttataagaaaaaactaactttttaaattcattgagtaattgacgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaacca-aaaa 48196002  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  48196003 agtcaaatgtttcttataaata 48196024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 321 - 446
Target Start/End: Original strand, 3162908 - 3163032
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    ||||||||||||||||||||| |||||||||| ||||  ||||| || |||||||| ||||||||||||  ||||||||||||||||||||||||| |||    
T  3162908 ttatttataagaaaaaattgactttttaaattcattgtgtaattaatatatcttgtctagaatatagactcaatacatcatttatgcaatgaatca-aaa 3163006  T
Q  421 aagttaaatgtttcttataaataaga 446  Q
    |||| |||||||| ||||||||||||    
T  3163007 aagtcaaatgttttttataaataaga 3163032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 43117988 - 43117866
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc-agaaa 420  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||||||| | || || |||||||||||||||||||||||||||||| |||| | |||    
T  43117988 tatttataagaaaaaattgattttttacattcattgaataattgatgtatttggtataaaatatagaccaaatacatcatttatgcaataaatcaaaaaa 43117889  T
Q  421 aagttaaatgtttcttataaata 443  Q
    ||||||||| |||| ||||||||    
T  43117888 aagttaaatatttcatataaata 43117866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 25477679 - 25477559
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  |||| |||||||||| ||||| |||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| ||||    
T  25477679 tatttataagaaaattttgactttttaaattcattgagtaattgatgtattttgtgtagaatatagatcaaatacatcatttatgcaatgaatca-aaaa 25477581  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| ||| |||||||||    
T  25477580 agtcaaatattttttataaata 25477559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 322 - 432
Target Start/End: Complemental strand, 53225778 - 53225669
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||||||||||| |||||| | || |||||| |||||||||||||||||||||||||||||||| ||||    
T  53225778 tatttataagaaaaaattgactttttagattcattgaataattaatgtatttggtatagaatgtagaccaaatacatcatttatgcaatgaatca-aaaa 53225680  T
Q  422 agttaaatgtt 432  Q
    ||| |||||||    
T  53225679 agtaaaatgtt 53225669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 322 - 431
Target Start/End: Complemental strand, 42169177 - 42169069
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| |||||||||||||||||||||| |||| | |||||| |||||||||||||||||||| ||||||||| ||||    
T  42169177 tatttataagaaaaatttgactttttagatttattgaataattgatgtattttgtcttgaatatggaccaaatacatcatttatgtaatgaatca-aaaa 42169079  T
Q  422 agttaaatgt 431  Q
    ||| ||||||    
T  42169078 agtcaaatgt 42169069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 343 - 443
Target Start/End: Original strand, 45096609 - 45096708
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaat 442  Q
    |||||| ||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||| ||||| ||||||| |||||||| ||||||||    
T  45096609 tttttagatttattgaataattgatgtatcttgtctagattatagaccaaatatatcatttatgcaataaatca-aaaaagtcaaatgttttttataaat 45096707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 321 - 444
Target Start/End: Original strand, 4386149 - 4386271
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||||||| ||| | |||||||||||| || | || ||||||||| |||||||||||||||| ||||||||| |||    
T  4386149 ttatttataagaaaaatttgactttttaaattcattaagtaattgatgtattttatctacaatatagactaaatacatcatttatgtaatgaatca-aaa 4386247  T
Q  421 aagttaaatgtttcttataaataa 444  Q
    |||| |||| ||||||||||||||    
T  4386248 aagtcaaatttttcttataaataa 4386271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 17284848 - 17284769
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaa 422  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  17284848 tttttaaatttattgtataattgatgtatcttgtctagaatatagaccacatacatcatttatgcaatgaatcaaaaaaa 17284769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 321 - 443
Target Start/End: Complemental strand, 36132770 - 36132649
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    ||||||||||||||||||||| |||| | ||  ||||| || |||||||||||||| | |||||||||| ||||||||||||||| |||||||||| |||    
T  36132770 ttatttataagaaaaaattgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatgaatca-aaa 36132672  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| |||| |||||||||||||    
T  36132671 aagtcaaatatttcttataaata 36132649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 42670778 - 42670898
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||  ||| ||||  ||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||    
T  42670778 tatttataagaaaaagttaacttttttgattcattgtgtaattaatgtatctcgtttagaatatagaccaaatatatcatttatgcaatgaatc-taaaa 42670876  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  42670877 agtcaaatgtttcttataaata 42670898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 44061521 - 44061402
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||||| || |||||||||| ||||  |||||  |||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  44061521 tatttataagaaaaaatcga-tttttaaattcattgtgtaattagtgtatcttgtctagaatatagaccaaatacattatttatgcaatgaatca-aaaa 44061424  T
Q  422 agttaaatgtttcttataaata 443  Q
    | | ||| ||||||||||||||    
T  44061423 actcaaacgtttcttataaata 44061402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 322 - 442
Target Start/End: Original strand, 8347659 - 8347778
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| | |||||||||| |||| || |||||||||| |||||||||||||| |||||||| | ||||    
T  8347659 tatttataagaaaaatttgactttttagattcattgagtgattgatgtattttgtataaaatatagaccgaatacatcatttatacaatgaat-aaaaaa 8347757  T
Q  422 agttaaatgtttcttataaat 442  Q
    ||| |||||||||||||||||    
T  8347758 agtcaaatgtttcttataaat 8347778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 322 - 411
Target Start/End: Original strand, 16412248 - 16412337
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatg 411  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||| ||| | || ||||||||||||||||||||| ||||||||||||    
T  16412248 tatttataagaaaaaattgactttttagattcattgaataattgatatatttggtctagaatatagaccaaatacattatttatgcaatg 16412337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 21554242 - 21554123
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| ||||| |||||| |  | |||||||||||||||||||||||||||||||||||||| |||||    
T  21554242 tatttataagaaaaagttgattttttagattcattgagtaattaatgtat-tgatatagaatatagaccaaatacatcatttatgcaatgaatc-gaaaa 21554145  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| ||| |||||||||    
T  21554144 agtcaaatattttttataaata 21554123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 53658498 - 53658378
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| |||||||| |||| | |||||| |||| ||||||||||||||||||||| ||| || |||||||| | ||||    
T  53658498 tatttataagaaaaagttaattttttagatttattgtataactaatgtattttgtctagaatatagaccaaatacattattcatacaatgaat-aaaaaa 53658400  T
Q  422 agttaaatgtttcttataaata 443  Q
    |||||||| |||||||||||||    
T  53658399 agttaaatatttcttataaata 53658378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 344 - 444
Target Start/End: Complemental strand, 32714381 - 32714282
Alignment:
Q  344 ttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||| ||| ||| ||| |||||||||| |||| |||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||    
T  32714381 ttttagattcattcaatgattgatgtattttgtctagaatatagactaaatacatcatttatgtaatgaatca-aaaaagtcaaatgtttcttataaata 32714283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 696484 - 696385
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||| | |||||||  |||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  696484 tatttataagaaaaagttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttatgcaatgaatcaaaaaa 696385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 764782 - 764683
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||| | |||||||  |||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  764782 tatttataagaaaaagttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttatgcaatgaatcaaaaaa 764683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 345 - 443
Target Start/End: Complemental strand, 35429884 - 35429787
Alignment:
Q  345 tttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    |||| ||| ||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| |||| | ||||||| |||| |||||||||||||    
T  35429884 tttagattaattgagtaattgatgtatcttgtctagaatatagaccaaatacatcttttatgcaacgaat-aaaaaaagtcaaatatttcttataaata 35429787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 378 - 443
Target Start/End: Original strand, 19150793 - 19150857
Alignment:
Q  378 tagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  19150793 tagaatatagaccaaatacatcatttatgcaatgaatc-gaaaaagtaaaatgtttcttataaata 19150857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 55190800 - 55190685
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||| |||||||||||||||| |  ||||| ||||||||||||||||| |||| || ||||||| ||||    
T  55190800 tatttataagaaaaaattgattttttatattcattcaataattgatgtatctagcctagaa-atagaccaaatacatcaattatccactgaatca-aaaa 55190703  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  55190702 agtaaattgtttcttata 55190685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 322 - 446
Target Start/End: Original strand, 47943741 - 47943864
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||| ||||||||||| |||||| ||| ||||| ||||| |||||  | || || ||||||||| |||||||||||||||||||||||||| ||||    
T  47943741 tatttatatgaaaaaattgactttttagattaattgagtaattaatgtacttggtataaaatatagactaaatacatcatttatgcaatgaatca-aaaa 47943839  T
Q  422 agttaaatgtttcttataaataaga 446  Q
     || |||||||  ||||||||||||    
T  47943840 tgtcaaatgttatttataaataaga 47943864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 350 - 444
Target Start/End: Complemental strand, 9044493 - 9044400
Alignment:
Q  350 atttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataa 444  Q
    ||||||||| |||||||||||| |||| |||||||||| ||||| ||||||||||| |||||||||| ||||||| |||| |||||||| |||||    
T  9044493 atttattgagtaattgatgtattttgtctagaatataggccaaagacatcatttatacaatgaatca-aaaaagtcaaatatttcttatgaataa 9044400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 45828549 - 45828429
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||||| ||||| |||||| | || || |||||| ||||||||||||||||||| || |||||| ||||    
T  45828549 tatttataagaaaaaattgattttttagattcattgagtaattaatgtatttggtctataatataaaccaaatacatcatttatgtaaagaatca-aaaa 45828451  T
Q  422 agttaaatgtttcttataaata 443  Q
    | | |||| ||| |||||||||    
T  45828450 aatcaaatattttttataaata 45828429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 41116576 - 41116695
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||||| ||||||||||||||| | || |||||||||||||||||| |||||| |||| ||| | ||||    
T  41116576 tatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagaccaaatacat-atttatacaataaat-aaaaaa 41116673  T
Q  422 agttaaatgtttcttataaata 443  Q
    | | ||| ||||||||||||||    
T  41116674 aatgaaaagtttcttataaata 41116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 322 - 446
Target Start/End: Original strand, 33010688 - 33010811
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||||  ||||| || ||| |||||||||||||| |  |||||||||||||||  ||  ||||| ||||    
T  33010688 tatttataagaaaaaattgattttttagattaattgtgtaattaatatattttgtttagaatatatattaaatacatcatttataaaaaaaatca-aaaa 33010786  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    | |||||  ||||||||||||||||    
T  33010787 aattaaacatttcttataaataaga 33010811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 28020609 - 28020495
Alignment:
Q  324 tttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaag 423  Q
    ||||||||||||| |||| |||||||||||||| | ||||| |||||| | || |||||||||||||||||| |||||| ||| ||| |     ||||||    
T  28020609 tttataagaaaaagttgactttttaaatttattaagtaattaatgtatttagtatagaatatagaccaaataaatcattaatgtaatca-----aaaaag 28020515  T
Q  424 ttaaatgtttcttataaata 443  Q
    | |||| |||||||||||||    
T  28020514 taaaatatttcttataaata 28020495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 332 - 446
Target Start/End: Complemental strand, 55951786 - 55951673
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||| ||| |||||| ||||||||| ||||| ||||||||||| | ||||||| | ||||||||||||||||  || |||| | ||||||| |||| |    
T  55951786 aaaaaaatgactttttagatttattgattaattaatgtatcttgtcttgaatataaatcaaatacatcatttatataacgaatta-aaaaagtcaaatat 55951688  T
Q  432 ttcttataaataaga 446  Q
    || ||||||||||||    
T  55951687 ttattataaataaga 55951673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 20459374 - 20459259
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  20459374 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 20459277  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  20459276 agtaaattgtttcttata 20459259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 322 - 415
Target Start/End: Original strand, 26066383 - 26066476
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    ||||||||||||| |||||| |||  | ||| |||||||||||||||||||  || |||||||||||||| |||||||| ||||  ||||||||    
T  26066383 tatttataagaaataattgactttcaagattcattgaataattgatgtatccggtctagaatatagaccagatacatcagttatttaatgaatc 26066476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 47866050 - 47866165
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  47866050 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 47866147  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  47866148 agtaaattgtttcttata 47866165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 319 - 399
Target Start/End: Original strand, 23226961 - 23227041
Alignment:
Q  319 ttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatc 399  Q
    ||||||||||||||||||||||| |||||| ||| |||   ||||| ||||||||||| || || ||||||||||||||||    
T  23226961 ttttatttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctaaaaaatagaccaaatacatc 23227041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 31977880 - 31977758
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgat--gtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaa 419  Q
    ||||||||||||||||| |  |||||| ||| ||||| ||||||||  ||||   ||||||||||||||||||||| ||||||||||| | |||| | ||    
T  31977880 tatttataagaaaaaatcggctttttagattcattgagtaattgatatgtatagggtttagaatatagaccaaatatatcatttatgctaggaat-aaaa 31977782  T
Q  420 aaagttaaatgtttcttataaata 443  Q
    ||| | |||| |||||||||||||    
T  31977781 aaaatcaaatatttcttataaata 31977758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 381 - 444
Target Start/End: Complemental strand, 2583157 - 2583095
Alignment:
Q  381 aatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataa 444  Q
    ||||||||||||||| |||||||||||||||||||||||||| |  ||||||||| ||||||||    
T  2583157 aatatagaccaaatatatcatttatgcaatgaatcagaaaaa-tcgaatgtttctaataaataa 2583095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 8347623 - 8347508
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| ||||||  || || |||||| | ||||||||| ||   ||||||||| | ||||||||||||| ||||||| || ||||| |    
T  8347623 ttataagaaaaagttgactttttaggttcatagaataaataatgtatcttattgtaaatatagactagatacatcatttatacaatgaaccaaaaaaaat 8347524  T
Q  425 taaatgtttcttataa 440  Q
     |||||||||||||||    
T  8347523 caaatgtttcttataa 8347508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 29686531 - 29686417
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||| |||| | |||||||||| |||| |||||| |||||| |||||   ||||||||| | ||||||||||||  ||||||| |  |||||||    
T  29686531 ttataagaaacaattaattttttaaattcattgtataattaatgtatattgttataaatatagactagatacatcatttacacaatgaa-cctaaaaagt 29686433  T
Q  425 taaatgtttcttataa 440  Q
     |||||||||||||||    
T  29686432 caaatgtttcttataa 29686417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 46434112 - 46434232
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||| ||| | |||| |||||| |||  || | ||||| || ||| |||||||||||||||| |||||| | |||||| ||||||||||  |||    
T  46434112 ttatttataaaaaatatttgactttttagattctttaagtaattaatatatattgtttagaatatagatcaaatataccatttaagcaatgaatc--aaa 46434209  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| |||| |||||||||||||    
T  46434210 aagtcaaatatttcttataaata 46434232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 50511376 - 50511262
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| | |||| |||||| |||||||| ||||||||| ||   ||||||| | |||||||||| |||  ||||||| || |||||||    
T  50511376 ttataagaaaaagttgactctttagatttatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttacacaatgaacca-aaaaagt 50511278  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  50511277 taattgtttcttataa 50511262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 54864081 - 54864195
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| ||||||  || || |||||||| ||||||||| ||   ||||||||| | |||||||| |||| ||||||| || |||||||    
T  54864081 ttataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactagatacatcacttatacaatgaacca-aaaaagt 54864179  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  54864180 taattgtttcttataa 54864195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 404
Target Start/End: Original strand, 9894639 - 9894721
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcattta 404  Q
    ||||||||||||||| |||| |||||| ||| |||   | ||| ||||||||||| ||||||||||| |||||||||||||||    
T  9894639 tatttataagaaaaagttgactttttagattcattatgttattaatgtatcttgtctagaatatagatcaaatacatcattta 9894721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 325 - 455
Target Start/End: Original strand, 31853084 - 31853213
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||| |||||| ||||| |||| || |||||||| ||||||||||||   ||||||||| | |||||||| |||  ||||||| |  |||||||    
T  31853084 ttataagaaataattgatttttttaattcatagaataattaatgtatcttgttataaatatagactagatacatcacttacacaatgaa-cctaaaaagt 31853182  T
Q  425 taaatgtttcttataaataagatcagaagga 455  Q
     |||| ||||||||||  |||| ||||||||    
T  31853183 caaatttttcttataataaagaccagaagga 31853213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 3043806 - 3043921
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| || || || || |||||||||||||||||  ||| |||||||||| ||||    
T  3043806 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctagtcta-aaaatagaccaaatacatcaactattcaatgaatca-aaaa 3043903  T
Q  422 agttaaatgtttcttata 439  Q
    | | || |||||||||||    
T  3043904 aataaattgtttcttata 3043921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 42804270 - 42804385
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| ||  ||||||| |||||||||||||||||  |||  ||||||||| ||||    
T  42804270 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctaatttagaa-atagaccaaatacatcaactatttaatgaatca-aaaa 42804367  T
Q  422 agttaaatgtttcttata 439  Q
    | | || |||||||||||    
T  42804368 aataaattgtttcttata 42804385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 43020770 - 43020885
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| ||    ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  43020770 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 43020867  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  43020868 agtaaattgtttcttata 43020885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 354 - 398
Target Start/End: Complemental strand, 30206570 - 30206526
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacat 398  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||    
T  30206570 attgaataattgatgtatctggtttataatatagaccaaatacat 30206526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 336 - 415
Target Start/End: Original strand, 1140893 - 1140972
Alignment:
Q  336 aattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    |||||| |||||| ||| |||||||||||||||||| |||||   ||||||||||| |||||||| |||  |||||||||    
T  1140893 aattgaatttttagattcattgaataattgatgtattttgttataaatatagaccagatacatcacttacacaatgaatc 1140972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 321 - 372
Target Start/End: Original strand, 23042609 - 23042660
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatc 372  Q
    |||||||||||||| |||||| | ||||||||||||||||||| ||||||||    
T  23042609 ttatttataagaaacaattgattatttaaatttattgaataatcgatgtatc 23042660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 33623011 - 33622897
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    ||||||||||||||||| ||||||  || || |||||||| ||||||||| ||   |||||| || | ||||||||  ||| ||||||| || |||||||    
T  33623011 ttataagaaaaaattgactttttacgttcatagaataattaatgtatcttattgtaaatataaactagatacatcacctatacaatgaacca-aaaaagt 33622913  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  33622912 taattgtttcttataa 33622897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 35877331 - 35877445
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| |||||| ||| || |||||||| ||||||||| ||   ||||||| | |||||||||| |||  ||||||| || ||||| |    
T  35877331 ttataagaaaaagttgactttttagattcatagaataattaatgtatcttattgtaaatatagtctaaatacatcacttacacaatgaacca-aaaaaat 35877429  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  35877430 taattgtttcttataa 35877445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 392 - 443
Target Start/End: Complemental strand, 37991550 - 37991500
Alignment:
Q  392 aatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    |||||||||||||| |||||||||| ||||| ||||||||||||||||||||    
T  37991550 aatacatcatttatacaatgaatca-aaaaatttaaatgtttcttataaata 37991500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 43141897 - 43141783
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| ||||||  || || |||||||| ||||||||| ||   ||||||||  | |||||||| |||| ||||||| || |||||||    
T  43141897 ttataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagattagatacatcacttatacaatgaacca-aaaaagt 43141799  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  43141798 taattgtttcttataa 43141783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 52136830 - 52136716
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||| |||||| ||||| | || || |||||||| ||||||||||||   ||||||||| |||||||||| |||  ||||||| |  |||||||    
T  52136830 ttataagaaacaattgatttttttagttcatagaataattaatgtatcttgttataaatatagactaaatacatcacttacacaatgaa-cctaaaaagt 52136732  T
Q  425 taaatgtttcttataa 440  Q
    ||| | ||||||||||    
T  52136731 taattttttcttataa 52136716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 323 - 405
Target Start/End: Original strand, 14859720 - 14859802
Alignment:
Q  323 atttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttat 405  Q
    |||||||| ||||| ||||  ||||| ||| |||||  |||||||||||||||| || |||||| || |||||||||||||||    
T  14859720 atttataataaaaatttgatattttagattcattgagaaattgatgtatcttgtctacaatatatactaaatacatcatttat 14859802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 40780381 - 40780268
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  || | |||||||||| ||| |||||||||||||||| ||||| || |||||  ||||||||||  |||  ||||||||| ||||    
T  40780381 tatttataagaaaa--ttaactttttaaattaattcaataattgatgtatctagttta-aaaatagattaaatacatcaactattgaatgaatca-aaaa 40780286  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  40780285 agtaaattgtttcttata 40780268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 388
Target Start/End: Complemental strand, 11372076 - 11372031
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatataga 388  Q
    |||| |||||||||||||||||||||||||| ||||| ||||||||    
T  11372076 ttttgaaatttattgaataattgatgtatctagtttataatataga 11372031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 443
Target Start/End: Original strand, 20114105 - 20114193
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||||| |||||| | ||||||||||||||||| |||||| | |||| |||| ||||  ||||||| || ||||| |||||||||    
T  20114105 attgaataatttatgtatttggtttagaatatagaccatatacattagttattcaattaatc-taaaaagtaaattgttttttataaata 20114193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 20745465 - 20745350
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| || |  ||||| ||||| |||||||||||  ||| |||||||||| ||||    
T  20745465 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagatcaaatacatcaactattcaatgaatca-aaaa 20745368  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || ||||| |||||    
T  20745367 agtaaattgttttttata 20745350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 402
Target Start/End: Original strand, 24100776 - 24100853
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatt 402  Q
    |||||||||| |||| | |||||| ||| ||||||||||| ||||||||||||   ||||||||| | ||||||||||    
T  24100776 ttataagaaataattaactttttagattcattgaataattaatgtatcttgttataaatatagactagatacatcatt 24100853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 440
Target Start/End: Complemental strand, 40592817 - 40592729
Alignment:
Q  351 tttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataa 440  Q
    ||||| |||||||| ||||||||||||   |||||| || | |||||||| |||| |||||||||  |||||||||| ||||||||||||    
T  40592817 tttatagaataattaatgtatcttgttataaatataaactagatacatcacttatacaatgaatc-caaaaagttaattgtttcttataa 40592729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 382 - 443
Target Start/End: Complemental strand, 50685530 - 50685470
Alignment:
Q  382 atatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||||||||||||||||||| ||| ||| | ||||||| ||||||||| ||||||||    
T  50685530 atatagaccaaatacatcatttatggaattaat-aaaaaaagtcaaatgtttcgtataaata 50685470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 398
Target Start/End: Complemental strand, 52278098 - 52278025
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacat 398  Q
    ||||||||||||||||| |||||| |||||| |||||||| || |||||| ||   ||||||||| ||||||||    
T  52278098 ttataagaaaaaattgactttttagatttatagaataattaatatatcttattgtaaatatagactaaatacat 52278025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 325 - 377
Target Start/End: Original strand, 22210806 - 22210858
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtt 377  Q
    |||||||||| |||||| |||||||||| ||||||||||| || |||||||||    
T  22210806 ttataagaaacaattgactttttaaattcattgaataattaatatatcttgtt 22210858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 411
Target Start/End: Original strand, 4698639 - 4698726
Alignment:
Q  324 tttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatg 411  Q
    |||| |||||| |||||| |||||| ||  ||||||||||| |||||||| ||||||| | ||||||| |||||| | |||| |||||    
T  4698639 tttacaagaaacaattgaatttttagatacattgaataatttatgtatctggtttagattctagaccatatacataaattattcaatg 4698726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 384 - 443
Target Start/End: Complemental strand, 34226459 - 34226401
Alignment:
Q  384 atagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||||||||||| |||| |||||||||| ||||||| || ||||| |||||||||    
T  34226459 atagaccaaatacatcaattattcaatgaatca-aaaaagtaaattgtttattataaata 34226401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 36196496 - 36196382
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    ||||||||||||||||| |||||| ||| || |||||||| ||||||||| ||   ||| ||||| | |||||||| ||||  |||||| || ||||| |    
T  36196496 ttataagaaaaaattgattttttagattcatagaataattaatgtatcttattgtaaatgtagactatatacatcacttataaaatgaacca-aaaaaat 36196398  T
Q  425 taaatgtttcttataa 440  Q
     || ||||||||||||    
T  36196397 caattgtttcttataa 36196382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 323 - 398
Target Start/End: Original strand, 36866868 - 36866943
Alignment:
Q  323 atttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacat 398  Q
    ||||| |||||| |||||| ||| || |||||||||||||||||||||| |||| || | | |||||||| |||||    
T  36866868 atttacaagaaacaattgactttatagatttattgaataattgatgtattttgtctatattctagaccaagtacat 36866943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 42159990 - 42160104
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||| |||||| |||||   || || |||||||| ||||||||||||   ||||||||| |||||||||| |||   ||||| ||  |||||||    
T  42159990 ttataagaaataattgattttttttgttcatagaataattaatgtatcttgttataaatatagactaaatacatcacttacataatgattc-taaaaagt 42160088  T
Q  425 taaatgtttcttataa 440  Q
     |||||||||||||||    
T  42160089 caaatgtttcttataa 42160104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 36866987 - 36866894
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    |||||| || ||| |||| | ||||||| || ||||||||||| |||||  | || |||||||||||| |||||||||| |||| |||| ||||    
T  36866987 tatttagaataaacaattaattttttaagttaattgaataatttatgtacttggtctagaatatagacaaaatacatcaattattcaataaatc 36866894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 48361186 - 48361066
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||| | |||| |||||  ||| |||| |||| |||||||| | || || | | ||||| |||||||||| |||  |||||||||  ||||    
T  48361186 tatttataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatc-taaaa 48361088  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| |||||||||||||    
T  48361087 agtcaaatttttcttataaata 48361066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 4e-41; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 30627836 - 30627957
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||| ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||    
T  30627836 ttatttataagaaaaatttgattttttatatttattgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatgcaatgaatcag-aa 30627934  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| ||||||||||||||||||    
T  30627935 aagtcaaatgtttcttataaata 30627957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 4e-38
Query Start/End: Original strand, 322 - 455
Target Start/End: Complemental strand, 17265855 - 17265723
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||||||| || || ||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| ||||    
T  17265855 tatttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatgcaatgaatca-aaaa 17265757  T
Q  422 agttaaatgtttcttataaataagatcagaagga 455  Q
    ||| |||||||||||||||||| |||| ||||||    
T  17265756 agtcaaatgtttcttataaataggatcggaagga 17265723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 322 - 446
Target Start/End: Original strand, 30895198 - 30895321
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||||||| |||| | |||| |||||  | || |||||||||||||||||| |||||||||||||||||||| ||||    
T  30895198 tatttataagaaaaagttgaatttttaaattcattggacaattaatgtacttggtatagaatatagaccaaatatatcatttatgcaatgaatca-aaaa 30895296  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    ||| |||||||||||||||||||||    
T  30895297 agtcaaatgtttcttataaataaga 30895321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 3064897 - 3065017
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||||||   |||||| ||| |||| |||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||| ||||    
T  3064897 tatttataagaaaaaattatctttttagattcattgtataattaatgtatcttgtataaaatatagaccaaatacaccatttatgcaatgaatca-aaaa 3064995  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| |||||||||||||    
T  3064996 agtaaaatatttcttataaata 3065017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 346 - 459
Target Start/End: Original strand, 9077624 - 9077736
Alignment:
Q  346 ttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataag 445  Q
    ||||||||||||  ||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| |||| |||||||||||||||    
T  9077624 ttaaatttattgtgtaattaatgtatcttgtctagaatatagaccaaatgcatcatttatgcaatgaatca-aaaaagtcaaatatttcttataaataag 9077722  T
Q  446 atcagaaggaatat 459  Q
    | | || |||||||    
T  9077723 accggagggaatat 9077736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 28630767 - 28630887
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||  ||| ||||| ||||||||||||||||| || |||||||||||||||||| ||||||||||||||||  ||||    
T  28630767 tatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatgaatc-taaaa 28630865  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| || |||||||||||||||    
T  28630866 agtcaattgtttcttataaata 28630887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 325 - 443
Target Start/End: Original strand, 28863337 - 28863454
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||| |||||||| ||||||  || |||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||| ||||| || || |    
T  28863337 ttataagataaaattgattttttagtttcattgtataatttatgtatcttgtctagaatataaaccaaatacatcatttatgcaataaatca-aagaatt 28863435  T
Q  425 taaatgtttcttataaata 443  Q
    |||||||||||||||||||    
T  28863436 taaatgtttcttataaata 28863454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 321 - 441
Target Start/End: Original strand, 2972177 - 2972296
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||| ||| |||| |||||| ||||||||| |||||| |||||||| | || ||||||||| |||||||||||||||||||||||||| |||    
T  2972177 ttatttataagagaaatttgactttttagatttattgagtaattggtgtatcttatctaaaatatagacaaaatacatcatttatgcaatgaatca-aaa 2972275  T
Q  421 aagttaaatgtttcttataaa 441  Q
    | ||  |||||||||||||||    
T  2972276 acgtctaatgtttcttataaa 2972296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 33120036 - 33119918
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  |||| |||||| ||| |||||||||| |||||||||||  |  ||||||||||||||||| ||||||| |||||||||| || |    
T  33120036 tatttataagaaaattttgactttttagattcattgaataatcgatgtatcttg--tcaaatatagaccaaatacaacatttatacaatgaatca-aaga 33119940  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  33119939 agtcaaatgtttcttataaata 33119918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 10283428 - 10283308
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||| ||||||| | |||||||||||||||| ||||||||||||  ||| || |||||| | |||||||||||||||| | |||||||| ||||    
T  10283428 tatttataagcaaaaattaattttttaaatttattgagtaattgatgtatactgtctaaaatatatatcaaatacatcatttataccatgaatca-aaaa 10283330  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| ||| |||||||||    
T  10283329 agtcaaatattttttataaata 10283308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 321 - 443
Target Start/End: Complemental strand, 12999891 - 12999769
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaa-atttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaa 419  Q
    ||||||||||| |||| |||| ||||| | ||| ||||| ||||| |||||  | || ||||||||||| |||||||||| |||||||||||||||| ||    
T  12999891 ttatttataagtaaaagttgactttttcagattcattgagtaattaatgtacttggtatagaatatagatcaaatacatcttttatgcaatgaatca-aa 12999793  T
Q  420 aaagttaaatgtttcttataaata 443  Q
    ||||||||||||||||| ||||||    
T  12999792 aaagttaaatgtttcttgtaaata 12999769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 322 - 416
Target Start/End: Complemental strand, 2230483 - 2230389
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatca 416  Q
    ||||||||||||||  |||| |||||| ||| ||||| ||||| ||||||||||| ||||||||||||||| |||||||||||| ||| ||||||    
T  2230483 tatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctagaatatagaccaagtacatcatttattcaacgaatca 2230389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 322 - 431
Target Start/End: Complemental strand, 1158379 - 1158271
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||| |||||| |||||| |||||||||  |||||||||||||||||| | || ||||||||||||| ||||||| | |||| |||||||||  ||||    
T  1158379 tatttacaagaaataattgactttttaaatacattgaataattgatgtatttggtctagaatatagaccgaatacattaattattcaatgaatc-taaaa 1158281  T
Q  422 agttaaatgt 431  Q
    ||||||||||    
T  1158280 agttaaatgt 1158271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 317 - 443
Target Start/End: Original strand, 8052864 - 8052990
Alignment:
Q  317 agttttatttataagaaaaaattgagtttttaaatttattgaataatt-gatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    |||| ||||||||||||||  |||| |||||||||  |||||||| || |||||||||||| ||||||| |||| |||||||| |||| | ||||||||     
T  8052864 agttctatttataagaaaattttgactttttaaatgcattgaatattttgatgtatcttgtctagaataaagactaaatacattatttgtacaatgaatt 8052963  T
Q  416 agaaaaagttaaatgtttcttataaata 443  Q
    | ||||||| |||| |||||||||||||    
T  8052964 a-aaaaagtcaaatatttcttataaata 8052990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 1837093 - 1836978
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||||||| ||||||||||||| || |  ||||| ||||||||||||||||| |||| |||| ||||| ||||    
T  1837093 tatttataagaaaaagttaattttttagatttattcaataattgatgtacctagcctagaa-atagaccaaatacatcaattattcaattaatca-aaaa 1836996  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  1836995 agtaaattgtttcttata 1836978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 360 - 453
Target Start/End: Complemental strand, 2937175 - 2937084
Alignment:
Q  360 taattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataagatcagaag 453  Q
    ||||| || |||||||| || ||| || |||||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  2937175 taattaatatatcttgtctaaaatgtaaaccaaataca-catttatgcaatgaatct-aaaaagttaaatgtttcttataaataggatcagaag 2937084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 354 - 451
Target Start/End: Original strand, 12450397 - 12450493
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataagatcaga 451  Q
    |||||||||||||||||| || | || ||||||||  |||||||||||||||||||||||| | ||||||| |||| ||||||||||||  |||||||    
T  12450397 attgaataattgatgtattttatctaaaatatagattaaatacatcatttatgcaatgaatta-aaaaagtcaaatatttcttataaattggatcaga 12450493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 321 - 389
Target Start/End: Complemental strand, 17705997 - 17705929
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagac 389  Q
    ||||||||||||||||||||| ||||| |||| ||||  | |||||||||||||||||| |||||||||    
T  17705997 ttatttataagaaaaaattgactttttgaattgattgcgtgattgatgtatcttgtttaaaatatagac 17705929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 21162473 - 21162414
Alignment:
Q  383 tatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||| |||||| ||||||||||||||| | ||||||||||||||||||||||||||    
T  21162473 tatagaccatatacattatttatgcaatgaatta-aaaaagttaaatgtttcttataaata 21162414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 401
Target Start/End: Complemental strand, 33127915 - 33127841
Alignment:
Q  327 ataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcat 401  Q
    |||||||| |||||| |||||| ||||||||||||||| ||||||||||||   ||||||||| | |||||||||    
T  33127915 ataagaaacaattgactttttagatttattgaataattaatgtatcttgttacaaatatagactagatacatcat 33127841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 354 - 443
Target Start/End: Original strand, 27909021 - 27909109
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||| |||||||||||||  || || |||||||| ||||||||||| |||| |||||||| | ||||||| ||||||||||| ||||||    
T  27909021 attgagtaattgatgtatccggtctaaaatatagatcaaatacatcaattattcaatgaatta-aaaaagtcaaatgtttcttgtaaata 27909109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 343 - 446
Target Start/End: Complemental strand, 7649912 - 7649810
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaat 442  Q
    |||||||||| |||||||||||||| ||| | || || | | |||||||||||||||| |||| |||||||||  |||||| ||| | ||| ||||||||    
T  7649912 tttttaaattcattgaataattgatttatttggtatatattttagaccaaatacatcaattattcaatgaatc-taaaaagataattatttattataaat 7649814  T
Q  443 aaga 446  Q
    ||||    
T  7649813 aaga 7649810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 446
Target Start/End: Original strand, 7649812 - 7649938
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaa-tcagaa 419  Q
    |||||||||| ||| ||||   |||||| ||| |||||||||||||||||| | || || |||||| |||||||| |||| |||| ||||||| | | ||    
T  7649812 ttatttataataaataattatctttttagattcattgaataattgatgtatttggtctaaaatatataccaaataaatcaattattcaatgaatttaaaa 7649911  T
Q  420 aaagttaaatgtttcttataaataaga 446  Q
    ||| |||| | ||||||| ||||||||    
T  7649912 aaaattaattatttcttagaaataaga 7649938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 8646812 - 8646697
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| ||   |||||| ||||||| ||||||||||||| ||   |||||| ||||||||||| |||||  ||| |||||||||| ||||    
T  8646812 tatttataagaaaaagttatctttttagatttatttaataattgatgtacctaacttagaa-atagaccaaatgcatcaactattcaatgaatca-aaaa 8646715  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || | |||||||||    
T  8646714 agtaaattatttcttata 8646697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 370
Target Start/End: Original strand, 17598128 - 17598173
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgta 370  Q
    ||||||||||||||||| ||||||||||||| |||||||| |||||    
T  17598128 ttataagaaaaaattgactttttaaatttatagaataattaatgta 17598173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 28630887 - 28630767
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||| |||||| |||||| ||| |||| |||| | |||||| | || || | ||||||| | |||||||| |||  |||||||| | ||||    
T  28630887 tatttataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaat-aaaaaa 28630789  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| |||||||||||||    
T  28630788 agtcaaatttttcttataaata 28630767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 350 - 422
Target Start/End: Complemental strand, 8920555 - 8920483
Alignment:
Q  350 atttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaa 422  Q
    |||||||||||||||||||||| |  |||| ||||||| | |  ||||||| |||| ||||||||||||||||    
T  8920555 atttattgaataattgatgtatttgatttataatatagtcaaggtacatcagttattcaatgaatcagaaaaa 8920483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 405
Target Start/End: Complemental strand, 3012486 - 3012407
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttat 405  Q
    |||||| ||||||| |  ||||| ||| ||| ||||| |||||||| ||||||| |||| |||||| |||||||||||||    
T  3012486 tataagcaaaaattcatgttttagattcattcaataaatgatgtatgttgtttacaataaagaccacatacatcatttat 3012407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 404
Target Start/End: Original strand, 9343137 - 9343216
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcattta 404  Q
    |||||||||| |||||| |||||| ||| || |||||||| ||||||||||||   ||||||||| | |||||| |||||    
T  9343137 ttataagaaataattgactttttagattcatagaataattaatgtatcttgttataaatatagactagatacattattta 9343216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 343 - 422
Target Start/End: Complemental strand, 24265584 - 24265505
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaa 422  Q
    |||||| ||||||| ||||||||||||||||   ||| ||||||| ||| |||||||| ||||  |||||||| ||||||    
T  24265584 tttttagatttattaaataattgatgtatctgaattataatatagtccatatacatcagttatttaatgaatctgaaaaa 24265505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 30438760 - 30438874
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| |||||| ||| || |||||||| |||||| || ||   ||||||||| | |||||||| |||| |||| || || |||||||    
T  30438760 ttataagaaaaagttgactttttagattcatagaataattaatgtattttattgtaaatatagactagatacatcacttatacaataaacca-aaaaagt 30438858  T
Q  425 taaatgtttcttataa 440  Q
    ||| | ||||||||||    
T  30438859 taattatttcttataa 30438874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 338 - 436
Target Start/End: Original strand, 5483891 - 5483988
Alignment:
Q  338 ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttctt 436  Q
    |||| |||||||||||||| |||||||||||||| |||| || | | ||||| |||||||| | |||| ||| |||||  ||||||| || ||||||||    
T  5483891 ttgactttttaaatttattaaataattgatgtattttgtctatattttagactaaatacattaattattcaacgaatc-taaaaagtcaattgtttctt 5483988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 415
Target Start/End: Original strand, 13417428 - 13417522
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    ||||||| |||| | | |||| |||||||||| ||| ||||||||||| |||  ||||| |||||| || |||||||||| |||| |||| ||||    
T  13417428 ttatttacaagatacagttgattttttaaattcatttaataattgatgcatcaggtttaaaatataaactaaatacatcaattattcaataaatc 13417522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 2810093 - 2810208
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||| ||||| || | |||||| ||| ||| ||||||||||||| || || ||||| |||| ||||||||||||  ||| |||||||| | ||||    
T  2810093 tatttataaaaaaaagttaattttttagattcattcaataattgatgtacctagtctagaa-atagtccaaatacatcaactattcaatgaatga-aaaa 2810190  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || | |||||||||    
T  2810191 agtaaattatttcttata 2810208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 7257464 - 7257415
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtat 371  Q
    ||||||||| | |||||||| |||||||||| ||||||||||| ||||||    
T  7257464 tatttataaaataaaattgactttttaaattcattgaataattaatgtat 7257415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 326 - 451
Target Start/End: Complemental strand, 28219 - 28093
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatca-gaaaaagt 424  Q
    ||||||||||| |||| |||| |||||||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||||||||  |||||||    
T  28219 tataagaaaaatttgacttttaaaatttattgaataattgatatatcttgtctaaaatatagatcaaatacatcatttatgcaatgaatcacaaaaaagt 28120  T
Q  425 taaatgtttcttataaataagatcaga 451  Q
    ||||| |||||||||||||||| ||||    
T  28119 taaatatttcttataaataagaccaga 28093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 79; Significance: 2e-36; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 10839777 - 10839896
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||||||||||| |||||  | || ||||||||||||||||||||||||||||||||||||||  ||||    
T  10839777 tatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatatagaccaaatacatcatttatgcaatgaatc--aaaa 10839874  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||||||||||||||||||||||    
T  10839875 agttaaatgtttcttataaata 10839896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 5031478 - 5031598
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||||||| ||| | ||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||    
T  5031478 tatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatca-aaaa 5031576  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  5031577 agtcaaatgtttcttataaata 5031598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 35149802 - 35149682
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  35149802 tatttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaattaatca-aaaa 35149704  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  35149703 agtcaaatgtttcttataaata 35149682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 7693167 - 7693047
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||||| ||||| |||||| | || || ||||||||| |||||||||||||||||||||||||| ||||    
T  7693167 tatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcatttatgcaatgaatca-aaaa 7693069  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  7693068 agtaaaatgtttcttataaata 7693047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 40483417 - 40483297
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||| ||||||| |||| ||||| |||||||||| |||||||| |||||| | |||||||| |||||||||||||||||||||||||||| | ||||    
T  40483417 tatttattagaaaaatttgactttttcaatttattgagtaattgatatatcttatctagaatatggaccaaatacatcatttatgcaatgaatta-aaaa 40483319  T
Q  422 agttaaatgtttcttataaata 443  Q
    |||||||| |||||||||||||    
T  40483318 agttaaatatttcttataaata 40483297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 331 - 443
Target Start/End: Original strand, 3236353 - 3236464
Alignment:
Q  331 gaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatg 430  Q
    ||||||||||| |||||||||| |||||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||| | ||||||| ||||     
T  3236353 gaaaaaattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttatacaatgaatta-aaaaagtcaaata 3236451  T
Q  431 tttcttataaata 443  Q
    |||||||||||||    
T  3236452 tttcttataaata 3236464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 323 - 443
Target Start/End: Complemental strand, 16448922 - 16448803
Alignment:
Q  323 atttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaa 422  Q
    |||||||||||||| || | |||||| ||| ||||| ||||||||||||||| | ||||||||| |||||||| |||||||||||||||||||| |||||    
T  16448922 atttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatatagaatataaaccaaatatatcatttatgcaatgaatca-aaaaa 16448824  T
Q  423 gttaaatgtttcttataaata 443  Q
    || ||||||||||||||||||    
T  16448823 gtcaaatgtttcttataaata 16448803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 332 - 443
Target Start/End: Complemental strand, 42123090 - 42122980
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||||||| |||||| ||| ||||| ||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||| ||| ||    
T  42123090 aaaaaattgactttttagattcattgagtaattaatgtatcttgtctagaatatataccaaatacatcatttatgcaatgaatca-aaaaagtcaaacgt 42122992  T
Q  432 ttcttataaata 443  Q
    ||||||||||||    
T  42122991 ttcttataaata 42122980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 8e-27
Query Start/End: Original strand, 322 - 448
Target Start/End: Original strand, 8803242 - 8803367
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||| |||||||| || | |||||| |||||||   ||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||| ||||    
T  8803242 tatttacaagaaaaagttaactttttatatttattatgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgtaatgaatca-aaaa 8803340  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    |||||||| ||| ||||||||| ||||    
T  8803341 agttaaatattttttataaataggatc 8803367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 8793733 - 8793853
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||| |||| ||||  ||||| ||| ||||| |||||||||||| | || || ||||||||| |||||||||||||||||||||||||| ||||    
T  8793733 tatttataagtaaaagttgatattttagattcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatca-aaaa 8793831  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| |||||||||||||    
T  8793832 agtcaaatatttcttataaata 8793853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 24619091 - 24618972
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtt-tagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||| || |||| |||| | ||| ||||| ||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  24619091 tatttataagaacaagttgactttt-agattcattgagtaattaatgta-cttgttatagaatatagaccaaatacatcatttatgcaatgaatca-aaa 24618995  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| ||| ||||||||||||||    
T  24618994 aagtcaaaggtttcttataaata 24618972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 326 - 443
Target Start/End: Complemental strand, 16008653 - 16008537
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagtt 425  Q
    ||||||||||| |||| || ||| ||||||||| || ||||||||| |||| |||||||| |||||||||||| |||||||||||  || | |||||||     
T  16008653 tataagaaaaatttgacttcttagatttattgagtacttgatgtattttgtctagaatattgaccaaatacattatttatgcaatagatta-aaaaagtc 16008555  T
Q  426 aaatgtttcttataaata 443  Q
    ||||||||||||||||||    
T  16008554 aaatgtttcttataaata 16008537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 322 - 414
Target Start/End: Complemental strand, 10184685 - 10184593
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    ||||||||||||||||| || |||||| ||| |||||||||||||||||| |  |  ||||||||||||||||||||||||||| ||||||||    
T  10184685 tatttataagaaaaaatcgactttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcatttatacaatgaat 10184593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 322 - 448
Target Start/End: Complemental strand, 15726893 - 15726769
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||||| |||||||  ||||||||||| |||||| || ||||||||||||||||| || |||   ||||    
T  15726893 tatttataagaaaaaattgactttttagattcattgagtaattgacttatcttgtttaaaatatatacaaaatacatcatttatgcgataaat--taaaa 15726796  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    | | |||| ||||||||||||| ||||    
T  15726795 aatcaaatatttcttataaataggatc 15726769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 321 - 444
Target Start/End: Complemental strand, 32597633 - 32597511
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| || | |||| ||||| ||||| ||||| |||||  | || || ||||||||| ||||||||| |||| ||||||||||| |||    
T  32597633 ttatttataagaaaaagttaacttttaaaattcattgagtaattaatgtacgtggtataaaatatagacaaaatacatcgtttacgcaatgaatca-aaa 32597535  T
Q  421 aagttaaatgtttcttataaataa 444  Q
    |||| |||||||||||||||||||    
T  32597534 aagtcaaatgtttcttataaataa 32597511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 321 - 427
Target Start/End: Original strand, 34711094 - 34711199
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||| |||||||||| |||||| ||| ||||| |||||||||||| |||| || |||||| || |||||||||||| ||||||| ||||| |||    
T  34711094 ttatttataaaaaaaaattgactttttagattcattgagtaattgatgtattttgtctaaaatataaactaaatacatcattaatgcaataaatca-aaa 34711192  T
Q  421 aagttaa 427  Q
    |||||||    
T  34711193 aagttaa 34711199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 8453728 - 8453609
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||  ||||| |||||||| |||||||| |||||||||||  |||||||| ||||||| ||||||||| ||||    
T  8453728 tatttataagaaaaatttgattttttagatacattgagtaattgatatatcttgtctagaatataga-taaatacattatttatgtaatgaatca-aaaa 8453631  T
Q  422 agttaaatgtttcttataaata 443  Q
    | | ||||||||| ||||||||    
T  8453630 attcaaatgtttcctataaata 8453609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 322 - 414
Target Start/End: Original strand, 1223137 - 1223229
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    |||||||||||||||| ||| |||||| ||| ||||  ||||| |||||||||||  | |||||||||||||||||| |||||||||||||||    
T  1223137 tatttataagaaaaaagtgactttttagattcattgtgtaattaatgtatcttgtcaaaaatatagaccaaatacataatttatgcaatgaat 1223229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 322 - 432
Target Start/End: Original strand, 15720213 - 15720322
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtt-tagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||||| | |||||| | |||| || |||||||||||| ||||| || |||||||| ||||||||| ||||||| ||||||||| |||    
T  15720213 tatttataagaaaaaattaactttttagacttatagagtaattgatgtat-ttgttataaaatatagatcaaatacattatttatggaatgaatca-aaa 15720310  T
Q  421 aagttaaatgtt 432  Q
    ||||||||||||    
T  15720311 aagttaaatgtt 15720322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 322 - 453
Target Start/End: Complemental strand, 24915303 - 24915174
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||| ||||||||| | |||||| ||| ||| |||||||||||||||| | |||||| |||||| |||||||||| ||||  ||||||||| ||||    
T  24915303 tatttatatgaaaaaattaactttttagattcattaaataattgatgtatctagcttagaa-atagacaaaatacatcaattatttaatgaatca-aaaa 24915206  T
Q  422 agttaaatgtttcttataaataagatcagaag 453  Q
    | | || |||| ||||||||||||| ||||||    
T  24915205 aataaattgttacttataaataagaccagaag 24915174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 12958790 - 12958905
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| || | |||||| |||||||||||||||||  ||| |||||||||| ||||    
T  12958790 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 12958887  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  12958888 agtaaattgtttcttata 12958905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 22429549 - 22429664
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||||||| ||||||| ||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  22429549 tatttataagaaaaagttaattttttagatttattcaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 22429646  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  22429647 agtaaattgtttcttata 22429664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 345 - 413
Target Start/End: Complemental strand, 36191856 - 36191790
Alignment:
Q  345 tttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaa 413  Q
    |||| ||| ||||||||||||||||||||||| || ||||||  |||||||||||||||||||||||||    
T  36191856 tttagattcattgaataattgatgtatcttgtataaaatata--ccaaatacatcatttatgcaatgaa 36191790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 13832006 - 13831892
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| ||||||  || || |||||||| ||||||||| ||   ||||||||| | |||||||| |||| ||||||| || |||||||    
T  13832006 ttataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgtaaatatagactatatacatcacttatacaatgaacca-aaaaagt 13831908  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  13831907 taattgtttcttataa 13831892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 29690453 - 29690567
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    ||||||||||||| ||| ||||||  || || |||||||| ||||||||| ||   ||||||||| | |||||||| |||| ||||||| || |||||||    
T  29690453 ttataagaaaaaactgactttttaggttcatagaataattaatgtatcttattataaatatagactagatacatcacttatacaatgaacca-aaaaagt 29690551  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  29690552 taattgtttcttataa 29690567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 43932180 - 43932066
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||| |||||| |||||| ||| ||||||||||| ||||||||||||   ||||||||  | ||||||||||| | ||||||| |  |||||||    
T  43932180 ttataagaaacaattgactttttagattcattgaataattaatgtatcttgttataaatatagattagatacatcatttgtacaatgaa-cctaaaaagt 43932082  T
Q  425 taaatgtttcttataa 440  Q
     || ||||||||||||    
T  43932081 caattgtttcttataa 43932066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 43332574 - 43332695
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagac-caaatacatcatttatgcaatgaatcagaaa 420  Q
    ||||||||||||||  |||| |||||| ||| ||||| ||||| || |||||||| ||||||  ||||  ||| |||||||||||||||||||||| |||    
T  43332574 tatttataagaaaattttgactttttagattcattgagtaattaatatatcttgtctagaatgaagacaaaaaaacatcatttatgcaatgaatca-aaa 43332672  T
Q  421 aagttaaatgtttcttataaata 443  Q
    || | |||| ||| |||||||||    
T  43332673 aaatcaaatattttttataaata 43332695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 24177986 - 24178101
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| |||| |||||||| || | |||||| |||||||||||||||||  ||| |||||||||| ||||    
T  24177986 tatttataagaaaaagttaactttttagattcattcaatatttgatgtacctagcttagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 24178083  T
Q  422 agttaaatgtttcttata 439  Q
    | | || |||||||||||    
T  24178084 aataaactgtttcttata 24178101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 24821981 - 24821905
Alignment:
Q  366 atgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||||| ||||||||| |  |||||||| ||||||| ||| ||| | ||||||||||||||||||||||||||    
T  24821981 atgtatcttgtctagaatatatattaaatacattatttatgtaataaatta-aaaaagttaaatgtttcttataaata 24821905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 35011226 - 35011341
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||| ||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  35011226 tatttataagaaaaagttaattttttagattcattcaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 35011323  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  35011324 agtaaattgtttcttata 35011341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 36366158 - 36366043
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  |||  ||||||||| ||||    
T  36366158 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattgaatgaatca-aaaa 36366061  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  36366060 agtaaattgtttcttata 36366043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 44796356 - 44796471
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| |||||||||||||  | |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  44796356 tatttataagaaaaagttaactttttagattcattcaataattgatgtacatagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 44796453  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  44796454 agtaaattgtttcttata 44796471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 354 - 414
Target Start/End: Original strand, 27789325 - 27789385
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    |||||||||||||||||||| || || ||||| |||||||||||||| |||| ||||||||    
T  27789325 attgaataattgatgtatctggtatataatattgaccaaatacatcagttattcaatgaat 27789385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 44580024 - 44579910
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| ||||||| || || |||||||| ||||||||| ||   ||||||||| | ||| || | |||| |||| ||||| |||||||    
T  44580024 ttataagaaaaagttgactttttaagttcatagaataattaatgtatcttattgtaaatatagactagatatattacttatacaataaatca-aaaaagt 44579926  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  44579925 taattgtttcttataa 44579910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 322 - 395
Target Start/End: Original strand, 4156394 - 4156468
Alignment:
Q  322 tatttataagaaaaaa-ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaata 395  Q
    |||||||||||||||| |||| || ||| ||  ||||| |||||||||||||||||||  |||||||||||||||    
T  4156394 tatttataagaaaaaaattgacttgttagatacattgagtaattgatgtatcttgtttgaaatatagaccaaata 4156468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 321 - 406
Target Start/End: Original strand, 30924715 - 30924801
Alignment:
Q  321 ttatttataaga-aaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatg 406  Q
    |||||||||| | ||||||||| |||||| ||||||| | |||||||||||| |  | |||||||||||||||||| || |||||||    
T  30924715 ttatttataaaataaaaattgactttttagatttattaattaattgatgtatttgatctagaatatagaccaaatatattatttatg 30924801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 414
Target Start/End: Complemental strand, 9550240 - 9550151
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    |||||||||| |||||| |||||||||||||||||||| | |||||||| ||    ||||||||| | |||||||| |||  ||||||||    
T  9550240 ttataagaaacaattgactttttaaatttattgaataactaatgtatctcgtaataaatatagactagatacatcacttacccaatgaat 9550151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 24822857 - 24822808
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtat 371  Q
    |||||||||||||||||||| |||||| |||||||| |||||| ||||||    
T  24822857 tatttataagaaaaaattgactttttagatttattgtataattaatgtat 24822808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 322 - 414
Target Start/End: Complemental strand, 883752 - 883660
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    ||||||||||||||| |||| |||||| ||| ||||  ||||| || ||| |||| || |||||| | |||||| ||||||||||||| ||||    
T  883752 tatttataagaaaaagttgactttttagattgattgtgtaattaatatattttgtctaaaatataaatcaaatatatcatttatgcaacgaat 883660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 360 - 404
Target Start/End: Original strand, 30255785 - 30255829
Alignment:
Q  360 taattgatgtatcttgtttagaatatagaccaaatacatcattta 404  Q
    ||||||||||||||||| ||||||||| | |||||||||||||||    
T  30255785 taattgatgtatcttgtctagaatatatatcaaatacatcattta 30255829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 405
Target Start/End: Original strand, 8818696 - 8818747
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacatcatttat 405  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| ||||    
T  8818696 attgaataattgatgtatctagtttataatatagatcagatacatcaattat 8818747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 9633098 - 9633212
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||| ||||||  ||||| ||| |||| |||||| ||||||||||||   ||||||||| | ||||||  ||||  ||||||| |  |||||||    
T  9633098 ttataagaaacaattgacgttttagattcattgtataattaatgtatcttgttataaatatagactagatacattgtttacacaatgaa-cttaaaaagt 9633196  T
Q  425 taaatgtttcttataa 440  Q
     |||||||||||||||    
T  9633197 caaatgtttcttataa 9633212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 404
Target Start/End: Complemental strand, 26998796 - 26998717
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcattta 404  Q
    ||||||| ||||||| | |||||||||||||| | ||| |||||||| | ||  | ||| ||||||||||||||||||||    
T  26998796 ttataagtaaaaattaactttttaaatttatttattaaatgatgtatttggtcaataatgtagaccaaatacatcattta 26998717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 360 - 446
Target Start/End: Original strand, 40651275 - 40651358
Alignment:
Q  360 taattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataaga 446  Q
    ||||| ||||||||||| || |||||| || |||||||| ||||||  | ||||||| ||||||| |||| ||||||||||||||||    
T  40651275 taattaatgtatcttgtctataatataaactaaatacattatttat--actgaatca-aaaaagtcaaatatttcttataaataaga 40651358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 439
Target Start/End: Original strand, 42786377 - 42786492
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| || | |||||| ||| ||| |||||||||||||  | | |||||| ||||||||||||||| |  ||| |||| ||||  |||    
T  42786377 ttatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcttagaa-atagaccaaatacattaactattcaataaatc--aaa 42786473  T
Q  421 aagttaaatgtttcttata 439  Q
    |||| || |||||||||||    
T  42786474 aagtaaattgtttcttata 42786492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 440
Target Start/End: Original strand, 45372723 - 45372836
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagtt 425  Q
    ||||||||||| |||| ||||||  || || |||||||| ||||||||| || | ||||||||| | |||||||| |||  || ||||||| |||||||     
T  45372723 tataagaaaaagttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactagatacatcacttacacattgaatca-aaaaagtc 45372821  T
Q  426 aaatgtttcttataa 440  Q
    || |||| |||||||    
T  45372822 aattgttacttataa 45372836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 6899434 - 6899549
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||| | ||| ||| ||||||||||||| ||    ||||| ||||| |||||||||||  ||| |||||||||| ||||    
T  6899434 tatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaa-atagatcaaatacatcaactattcaatgaatca-aaaa 6899531  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  6899532 agtaaattgtttcttata 6899549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 415
Target Start/End: Complemental strand, 8793853 - 8793760
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    ||||||||||||| | |||| |||||  ||| |||| |||| |||||||| | || || | |||||||||||||||||| |||  |||||||||    
T  8793853 tatttataagaaatatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaatc 8793760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 354 - 443
Target Start/End: Complemental strand, 10396894 - 10396806
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    |||||| |||| |||||| | ||||||||||||||||| |||||| | |||| |||| ||||  ||||||| || ||||| |||||||||    
T  10396894 attgaacaatttatgtatttggtttagaatatagaccatatacattagttattcaattaatc-taaaaagtaaattgttttttataaata 10396806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 414
Target Start/End: Complemental strand, 13831495 - 13831403
Alignment:
Q  322 tatttataagaaaaaa-ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    |||||||||||||||| |||| |||||| ||| ||| |||||||||||||| | || || || ||||||| ||||||||| ||||  |||||||    
T  13831495 tatttataagaaaaaaattgactttttagattcattaaataattgatgtatttagtcta-aaaatagaccgaatacatcaattatttaatgaat 13831403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 350 - 415
Target Start/End: Complemental strand, 33057972 - 33057907
Alignment:
Q  350 atttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    ||||||| ||||||||||||||||   ||| ||||||| |||||||||||| ||||  ||||||||    
T  33057972 atttattaaataattgatgtatctgaattataatatagtccaaatacatcaattatttaatgaatc 33057907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 9e-36; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 9e-36
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 38040410 - 38040290
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||| ||||    
T  38040410 tatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatca-aaaa 38040312  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  38040311 agtcaaatgtttcttataaata 38040290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 305 - 443
Target Start/End: Original strand, 34332474 - 34332610
Alignment:
Q  305 ctactccctccaagttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcattta 404  Q
    ||||||||||||| | |||| ||||||||||  |||| |||||| ||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||    
T  34332474 ctactccctccaa-tcttatatataagaaaactttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcattta 34332572  T
Q  405 tgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    | |||||||||| ||||||| ||||||||||||||||||    
T  34332573 tccaatgaatca-aaaaagtcaaatgtttcttataaata 34332610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 322 - 448
Target Start/End: Complemental strand, 38738065 - 38737940
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||||| ||||||||||||||||| ||||||||| |||||||||||| |||||||||||||||| ||||    
T  38738065 tatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttgtctagaatataaaccaaatacatcctttatgcaatgaatca-aaaa 38737967  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    ||| |||||||||||||||||| ||||    
T  38737966 agtcaaatgtttcttataaataggatc 38737940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 321 - 446
Target Start/End: Original strand, 26070837 - 26070961
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||  ||| |||| |||||| ||| ||||| ||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||| |||    
T  26070837 ttatttataagtgaaatttgactttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatgcaatgaatca-aaa 26070935  T
Q  421 aagttaaatgtttcttataaataaga 446  Q
    |||| |||||||||||||||||||||    
T  26070936 aagtaaaatgtttcttataaataaga 26070961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 49944847 - 49944967
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||    
T  49944847 tatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaatca-aaaa 49944945  T
Q  422 agttaaatgtttcttataaata 443  Q
    | | ||||||||||| ||||||    
T  49944946 aatcaaatgtttcttgtaaata 49944967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 11386170 - 11386288
Alignment:
Q  324 tttataagaaaaaattgagtttttaa-atttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaa 422  Q
    |||||||||||||||||| ||||| | ||| |||||||||||||||| ||| || |||||||||||| |||||||||||||||||||||||||  |||||    
T  11386170 tttataagaaaaaattgatttttttagattcattgaataattgatgtttctggtctagaatatagacgaaatacatcatttatgcaatgaatc--aaaaa 11386267  T
Q  423 gttaaatgtttcttataaata 443  Q
    || ||||||||||||||||||    
T  11386268 gtcaaatgtttcttataaata 11386288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 26760307 - 26760187
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||||||| ||||| | ||| |||||  | || |||||||||||||||||||||||||||| |||||||||| ||||    
T  26760307 tatttataagaaaaaattgattttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttattcaatgaatca-aaaa 26760209  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  26760208 agtcaaatgtttcttataaata 26760187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 44939200 - 44939080
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||| |||||||| |||||| ||| ||||| ||||||||||||||  | |||||||||||||||||||||||||||| |||||||| | ||||    
T  44939200 tatttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttatacaatgaat-aaaaaa 44939102  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  44939101 agtcaaatgtttcttataaata 44939080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 322 - 446
Target Start/End: Original strand, 23923564 - 23923687
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| ||||| |||||| |||| ||||||||||||||||| |||||||||||||||||||||| |||    
T  23923564 tatttataagaaaaatttgaatttttagattcattgagtaattaatgtatattgtctagaatatagaccaaatgcatcatttatgcaatgaatcag-aaa 23923662  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    ||| || | ||||||||||||||||    
T  23923663 agtaaattttttcttataaataaga 23923687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 26924227 - 26924347
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||||||| ||||| | ||| |||||  | || |||||||||||||||||||||||||||| |||||||||| ||||    
T  26924227 tatttataagaaaaagttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcatttattcaatgaatca-aaaa 26924325  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  26924326 agtcaaatgtttcttataaata 26924347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 322 - 446
Target Start/End: Complemental strand, 50155432 - 50155308
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| |||||||||||| | || || |||||||||||||||||||||||||||||||||| | ||||    
T  50155432 tatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcatttatgcaatgaattaaaaaa 50155333  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    | | |||| ||| ||||||||||||    
T  50155332 aatcaaatatttattataaataaga 50155308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 328 - 443
Target Start/End: Original strand, 15342957 - 15343071
Alignment:
Q  328 taagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaa 427  Q
    ||||||||| |||| |||||| ||| ||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | ||    
T  15342957 taagaaaaagttgaatttttagattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatca-aaaaaatcaa 15343055  T
Q  428 atgtttcttataaata 443  Q
    || |||||||||||||    
T  15343056 atatttcttataaata 15343071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 322 - 444
Target Start/End: Complemental strand, 34146938 - 34146818
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||  ||| ||||||||||| |||||| |  | ||||||||| | |||||||||||||| || ||||||||| ||||    
T  34146938 tatttataagaaaaaattgatttttttgattcattgaataattaatgtatttgatctagaatatatatcaaatacatcattt-tgtaatgaatca-aaaa 34146841  T
Q  422 agttaaatgtttcttataaataa 444  Q
    |||||||||||||||||||||||    
T  34146840 agttaaatgtttcttataaataa 34146818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 519967 - 519847
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  || | |||||| ||| ||||| ||||||||||||||| | ||||||||||| |||||||||||||||| |||| ||||| ||||    
T  519967 tatttataagaaaattttaactttttagattcattgagtaattgatgtatcttatctagaatatagatcaaatacatcatttatacaataaatca-aaaa 519869  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||||||| |||||||||    
T  519868 agtcaaatgtttattataaata 519847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 319 - 443
Target Start/End: Original strand, 640533 - 640655
Alignment:
Q  319 ttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcaga 418  Q
    ||||||||||||||||||||||| |||||| ||| || || ||||||||||||||| | || ||||||||| |||||||| |||||| |||||||| | |    
T  640533 ttttatttataagaaaaaattgactttttagattcat-gagtaattgatgtatcttatctaaaatatagactaaatacataatttatacaatgaatga-a 640630  T
Q  419 aaaagttaaatgtttcttataaata 443  Q
    |||| ||||||||||| ||||||||    
T  640631 aaaaattaaatgtttcatataaata 640655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 38590202 - 38590084
Alignment:
Q  322 tatttataagaaaaaa--ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaa 419  Q
    ||||||||||||||||  || | |||||| ||| ||||| |||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||| ||    
T  38590202 tatttataagaaaaaaaattaactttttagattcattgagtaattgatgtatctggtatagaatatagaccaaatacattatttatgaaatgaatca-aa 38590104  T
Q  420 aaagttaaatgtttcttata 439  Q
    ||||| ||||| ||||||||    
T  38590103 aaagtcaaatgcttcttata 38590084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 343 - 437
Target Start/End: Original strand, 6661549 - 6661642
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttctta 437  Q
    |||||| ||| ||| | ||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  6661549 tttttagattcatttagtaattaatgtatcttgtatagaatatagaccaaatacatcatttatgcaattaatca-aaaaagtcaaatgtttctta 6661642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 6793607 - 6793728
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| || | |||||||||| ||||||||||| |||||  | || || | |||||  |||||||||||||||||||||||||||  ||    
T  6793607 ttatttataagaaaaagttaattttttaaattcattgaataattaatgtacttagtatatattataggtcaaatacatcatttatgcaatgaatca-taa 6793705  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||||||||||||||| ||||||    
T  6793706 aagttaaatgtttcttttaaata 6793728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 47912948 - 47912831
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| ||||||||||||||| |||||| ||||||||||| |||  |||||| ||||||||| |||||| |||| ||||| ||||    
T  47912948 tatttataagaaaaa-ttgactttttaaatttattgtataattaatgtatcttgtctag--tatagatcaaatacattatttatacaataaatca-aaaa 47912853  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| |||||||||||||    
T  47912852 agtcaaatatttcttataaata 47912831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 322 - 414
Target Start/End: Complemental strand, 24305799 - 24305707
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    |||||| |||||||| || | |||||||||||||||| ||||||||||||||||| ||||||||| |||  ||||||||||||||| ||||||    
T  24305799 tatttagaagaaaaatttaattttttaaatttattgagtaattgatgtatcttgtatagaatataaaccttatacatcatttatgcgatgaat 24305707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 29256732 - 29256615
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| ||||| |||| | | || || |||| ||||||||||||||||||||||||||||||| ||||    
T  29256732 tatttataagaaaaagttgactttttagattcattgagtaattaatgtttttggtataaaata-agaccaaatacatcatttatgcaatgaatcaaaaaa 29256634  T
Q  422 agttaaatgtttcttataaata 443  Q
    |   ||||||||||||||||||    
T  29256633 a---aaatgtttcttataaata 29256615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 320 - 443
Target Start/End: Original strand, 18744571 - 18744689
Alignment:
Q  320 tttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaa 419  Q
    |||| |||||||||||| |||| |||||| ||| ||||||||||||   ||| |  | ||||||||||||||| ||||||||||||||||||||| | ||    
T  18744571 tttacttataagaaaaagttgactttttagattcattgaataattg---tatttgatctagaatatagaccaa-tacatcatttatgcaatgaat-aaaa 18744665  T
Q  420 aaagttaaatgtttcttataaata 443  Q
    ||||||||||||||||| ||||||    
T  18744666 aaagttaaatgtttcttttaaata 18744689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 322 - 416
Target Start/End: Original strand, 26823151 - 26823245
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatca 416  Q
    ||||||||| |||||||| | |||||||||||||||||||||||||  ||||  | |||||||||||| || ||||||||| ||||||| |||||    
T  26823151 tatttataataaaaaattaactttttaaatttattgaataattgatacatctaatctagaatatagacgaagtacatcattaatgcaataaatca 26823245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 37178948 - 37179041
Alignment:
Q  346 ttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataa 440  Q
    ||||||| ||||  ||||| ||||||||||| || ||||||||| ||||||||||||||| |||| ||||| ||||||| |||||||||||||||    
T  37178948 ttaaattcattgtgtaattaatgtatcttgtctaaaatatagactaaatacatcatttatacaataaatca-aaaaagtcaaatgtttcttataa 37179041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 320 - 410
Target Start/End: Original strand, 47883975 - 47884065
Alignment:
Q  320 tttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaat 410  Q
    |||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| ||||  |||||||| ||||| || |||||| ||||    
T  47883975 tttatttataagaaaaaattgactttttaaattaatttagtaattgatgtatcttatttaagatatagacaaaataaattatttatacaat 47884065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 8971242 - 8971362
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| |||| ||| ||| ||||| ||||| |||||| |    ||||||||||| |||| || | ||||||||||||||||| ||||    
T  8971242 tatttataagaaaaaattaagttgttagattcattgagtaattaatgtatttgacatagaatatagatcaaacacgttatttatgcaatgaatca-aaaa 8971340  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| |||||||||||||    
T  8971341 agtcaaatatttcttataaata 8971362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 25021365 - 25021245
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||| |||||| |||||| |||||| |||||||||||||||||||||||  | |||||||||   | |||||||||| |||| |||||||||  ||||    
T  25021365 tatttacaagaaacaattgactttttagatttattgaataattgatgtatccggattagaatatcagctaaatacatcaattattcaatgaatc-taaaa 25021267  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |  |||||||||||||||    
T  25021266 agtcatttgtttcttataaata 25021245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 322 - 401
Target Start/End: Complemental strand, 7375603 - 7375524
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcat 401  Q
    |||||||||||||||||||| |||||| ||| ||||  ||||| ||||||||||| ||||||||| ||||||||| ||||    
T  7375603 tatttataagaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctagaatataaaccaaatacttcat 7375524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 322 - 448
Target Start/End: Complemental strand, 37515224 - 37515099
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| | ||||| |||||| |||| | |||||| ||  |||||||| ||||||||||| ||| | ||||    
T  37515224 tatttataagaaaaatttaactttttagattcattaagtaattaatgtatgttgtctggaatatggattaaatacattatttatgcaataaat-aaaaaa 37515126  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    |||||||||||| |||||||| |||||    
T  37515125 agttaaatgttttttataaatgagatc 37515099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 354 - 443
Target Start/End: Complemental strand, 15286111 - 15286023
Alignment:
Q  354 attgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||||| |||||  | || ||||||||||| ||||||||||||||||  ||||||| | ||||||| ||||||||||||||||||    
T  15286111 attgaataattaatgtacttggtatagaatatagatcaaatacatcatttatataatgaatta-aaaaagtcaaatgtttcttataaata 15286023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 43929479 - 43929364
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||||||||| || | |||||| |||||||||||||||||  |||  ||||||||| ||||    
T  43929479 tatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaa-atagaccaaatacatcaactatttaatgaatca-aaaa 43929382  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  43929381 agtaaattgtttcttata 43929364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 322 - 446
Target Start/End: Original strand, 34662696 - 34662818
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||| ||||| || | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  34662696 tatttataaaaaaaagttaactttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 34662793  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    ||| || ||||||||||| ||||||    
T  34662794 agtaaattgtttcttatatataaga 34662818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 381 - 448
Target Start/End: Complemental strand, 39748694 - 39748628
Alignment:
Q  381 aatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataagatc 448  Q
    |||||| || |||||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||    
T  39748694 aatatatacaaaatacatcatttatgcaatgaatta-aaaaagtcaaatatttcttataaataagatc 39748628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 394 - 448
Target Start/End: Complemental strand, 2351195 - 2351142
Alignment:
Q  394 tacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataagatc 448  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  2351195 tacaacatttatgcaatgaatca-aaaaagttaaatgtttcttataaataggatc 2351142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 322 - 384
Target Start/End: Original strand, 23923408 - 23923470
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaata 384  Q
    ||||||||||||||| |||| |||||| |||  |||||||||||||||||||||| |||||||    
T  23923408 tatttataagaaaaatttgaatttttagattcgttgaataattgatgtatcttgtctagaata 23923470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 446
Target Start/End: Complemental strand, 27819447 - 27819322
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatac-atcatttatgcaatgaatcagaa 419  Q
    ||||||| |||||||| || | |||||| ||| |||||||| ||| ||||| |||| || |||||| | ||||||  |||||||||| ||||||||| ||    
T  27819447 ttatttacaagaaaaatttaactttttagattcattgaatatttggtgtattttgtctaaaatataaatcaaataatatcatttatgaaatgaatca-aa 27819349  T
Q  420 aaagttaaatgtttcttataaataaga 446  Q
    ||||| |||| ||| ||||||||||||    
T  27819348 aaagtcaaatattttttataaataaga 27819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 45977225 - 45977111
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| ||||||  ||||| |||||||| ||||||||| ||   ||||||||| | ||||||||  ||| |||| || || |||||||    
T  45977225 ttataagaaaaagttgactttttacgtttatagaataattaatgtatcttattgtaaatatagactagatacatcacctatacaataaacca-aaaaagt 45977127  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  45977126 taattgtttcttataa 45977111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 391 - 446
Target Start/End: Complemental strand, 52427412 - 52427358
Alignment:
Q  391 aaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataaga 446  Q
    |||||||||||||||||||||||||| ||||||| ||| ||||||||| |||||||    
T  52427412 aaatacatcatttatgcaatgaatca-aaaaagtcaaacgtttcttatgaataaga 52427358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 14647063 - 14647010
Alignment:
Q  389 ccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||| ||||||| |||||||||| |||||| |||||||||||||||||||    
T  14647063 ccaaatacaccatttatacaatgaatca-aaaaaggtaaatgtttcttataaata 14647010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 15351729 - 15351818
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    |||||| ||||||| |  ||||||||| ||| ||||| |||||||| |||| || |||| |||||| |||||||||||||  ||||||||    
T  15351729 tataagcaaaaatttatattttaaattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcatttattgaatgaatc 15351818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 371
Target Start/End: Complemental strand, 28359056 - 28359007
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtat 371  Q
    |||||||||||||||| ||| |||||||||| ||||||||||| ||||||    
T  28359056 tatttataagaaaaaaatgaatttttaaattcattgaataattaatgtat 28359007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 319 - 359
Target Start/End: Original strand, 2855096 - 2855136
Alignment:
Q  319 ttttatttataagaaaaaattgagtttttaaatttattgaa 359  Q
    |||||||||||||||| |||||| |||||||||||||||||    
T  2855096 ttttatttataagaaacaattgactttttaaatttattgaa 2855136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 343 - 443
Target Start/End: Complemental strand, 5891839 - 5891740
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaat 442  Q
    |||||| ||| ||||| ||||| || ||| | || | ||||||| ||||||||||| || |||||||| ||| | |||||||||||| ||||||||||||    
T  5891839 tttttatattcattgattaattaatatatttggtattgaatataaaccaaatacattatatatgcaattaatta-aaaaagttaaatatttcttataaat 5891741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 351 - 415
Target Start/End: Original strand, 31362462 - 31362526
Alignment:
Q  351 tttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    |||||||| ||| ||||||||||||| || ||||| ||||| |||||||| |||| |||||||||    
T  31362462 tttattgattaactgatgtatcttgtctataatatggaccatatacatcaattattcaatgaatc 31362526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 400
Target Start/End: Complemental strand, 27687972 - 27687897
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatca 400  Q
    ||||||||||||||| | ||||||| ||||| |||||||| ||||||||| ||   ||||||||| | ||||||||    
T  27687972 ttataagaaaaaattaactttttaagtttatagaataattaatgtatcttattgtaaatatagactagatacatca 27687897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 25021245 - 25021294
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtat 371  Q
    ||||||||||||| || ||| |||||| ||| ||||||||||||||||||    
T  25021245 tatttataagaaacaaatgactttttagattcattgaataattgatgtat 25021294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 38737945 - 38738065
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||| | |||| |||||  ||| |||| ||||  ||||||| | ||||| | | ||||| | |||||||| |||  |||||||||  ||||    
T  38737945 tatttataagaaacatttgacttttttgattcattgcataaaggatgtatttggtttatattctagacaagatacatcaattactcaatgaatct-aaaa 38738043  T
Q  422 agttaaatgtttcttataaata 443  Q
    |||||||| |||||||||||||    
T  38738044 agttaaatttttcttataaata 38738065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 47678389 - 47678274
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||| | ||| ||| ||||||||||||| ||    ||||| ||||| |||||||||||  ||| |||||||||| ||||    
T  47678389 tatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaa-atagatcaaatacatcaactattcaatgaatca-aaaa 47678292  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  47678291 agtaaattgtttcttata 47678274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 49944967 - 49944847
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||| |||||| | |||| |||||  ||| |||| |||| |||||||| | || || | | ||||| | |||||||| |||| |||||||||  ||||    
T  49944967 tatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatct-aaaa 49944869  T
Q  422 agttaaatgtttcttataaata 443  Q
    |||||||| |||||||||||||    
T  49944868 agttaaatttttcttataaata 49944847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 5e-34; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 322 - 448
Target Start/End: Original strand, 38394442 - 38394567
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||||||||||| |||||  | || |||||| |||||||||||||||||||||||||||||||| ||||    
T  38394442 tatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatca-aaaa 38394540  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    ||| |||||||||||||||||| ||||    
T  38394541 agtaaaatgtttcttataaataggatc 38394567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 5002274 - 5002154
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  || | |||||| ||||||||| ||||||||||||||||| || |||||||| ||||||||||||||||||||| ||||| ||||    
T  5002274 tatttataagaaaatttttactttttagatttattgagtaattgatgtatcttgtctaaaatatagatcaaatacatcatttatgcaattaatca-aaaa 5002176  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  5002175 agtcaaatgtttcttataaata 5002154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 324 - 443
Target Start/End: Original strand, 33478121 - 33478241
Alignment:
Q  324 tttataagaaaaaa--ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  |||| |||||| ||| ||||| |||||||||||||| || |||||||||| |||||||||||||||||||||||||||| ||||    
T  33478121 tttataagaaaaaaatttgaatttttagattcattgagtaattgatgtatctcgtctagaatataggccaaatacatcatttatgcaatgaatca-aaaa 33478219  T
Q  422 agttaaatgtttcttataaata 443  Q
     || ||||||||||||||||||    
T  33478220 tgtcaaatgtttcttataaata 33478241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 13789866 - 13789746
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||| | ||| ||||||||||| |||||  | || |||||| |||||||||||||||||||||||||||||||| ||||    
T  13789866 tatttataagaaaaagttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatca-aaaa 13789768  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  13789767 agtaaaatgtttcttataaata 13789746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 18473489 - 18473609
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||| ||| ||| |||| |||||| ||| ||||| ||||||||||||||||| ||||||||||| ||||| |||||||||| |||||||||| ||||    
T  18473489 tatttatgagagaaatttgactttttagattcattgagtaattgatgtatcttgtctagaatatagatcaaatgcatcatttatacaatgaatca-aaaa 18473587  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  18473588 agtcaaatgtttcttataaata 18473609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 317 - 448
Target Start/End: Original strand, 22101917 - 22102047
Alignment:
Q  317 agttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatca 416  Q
    |||||||||||||||||||| |||| |||||| ||| ||||  ||||| ||||||||||| || |||||||| ||||||||| |||||| |||| |||||    
T  22101917 agttttatttataagaaaaatttgattttttagattcattgtgtaattaatgtatcttgtctaaaatatagatcaaatacattatttatacaataaatca 22102016  T
Q  417 gaaaaagttaaatgtttcttataaataagatc 448  Q
     ||||||| |||| ||||||||||||| ||||    
T  22102017 -aaaaagtcaaatatttcttataaatatgatc 22102047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 322 - 440
Target Start/End: Original strand, 29299371 - 29299489
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| | |||||||||| |||| || |||||||||| |||||||||||||| ||||||||   ||||    
T  29299371 tatttataagaaaaatttgattttttagattcattgagtgattgatgtattttgtctaaaatatagaccgaatacatcatttatacaatgaattcaaaaa 29299470  T
Q  422 agttaaatgtttcttataa 440  Q
    ||| |||||||||||||||    
T  29299471 agtcaaatgtttcttataa 29299489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 362 - 443
Target Start/End: Original strand, 1248883 - 1248964
Alignment:
Q  362 attgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||  ||||||| | ||||||||||||||||||||||||||    
T  1248883 attgatgtatcttgtctagaatatagatcaaatacatcatttatcaaatgaataaaaaaaagttaaatgtttcttataaata 1248964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 11931983 - 11932104
Alignment:
Q  322 tatttataagaaaaaa-ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| |||| |||||| ||| ||||  ||||| ||||||||||| || |||||||||||||||||||||||||  ||| ||||| |||    
T  11931983 tatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctaaaatatagaccaaatacatcatttatataataaatca-aaa 11932081  T
Q  421 aagttaaatgtttcttataaata 443  Q
    || ||||||||||||| ||||||    
T  11932082 aaattaaatgtttcttttaaata 11932104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 1138351 - 1138232
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||||||| ||| ||||||| |||||||| |  ||||| ||||||||||||||| | |||| |||| ||||| ||||    
T  1138351 tatttataagaaaaaattgattttttaaattcattaaataattaatgtatctagactagaa-atagaccaaatacattaattattcaataaatca-aaaa 1138254  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| || |||||||||||||||    
T  1138253 agtaaattgtttcttataaata 1138232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 332 - 446
Target Start/End: Original strand, 10228087 - 10228204
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttaga----atatagaccaaatacatcatttatgcaatgaatcagaaaaagttaa 427  Q
    |||||||| | |||||| |||||||||| |||||||||||||||| ||||    |||||||| | ||||||||||||| |||||||||| ||||||| ||    
T  10228087 aaaaaattaactttttagatttattgaacaattgatgtatcttgtctagaatatatatagacgagatacatcatttatacaatgaatca-aaaaagtcaa 10228185  T
Q  428 atgtttcttataaataaga 446  Q
    |||||||| ||||||||||    
T  10228186 atgtttctaataaataaga 10228204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 21488417 - 21488297
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||||| | |||   ||||| |||||| |||| ||||||||||||||||||||| ||||||||||||||| | ||||    
T  21488417 tatttataagaaaaagttaattttttaaactcattatgtaattaatgtattttgtctagaatatagaccaaatacattatttatgcaatgaatta-aaaa 21488319  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| |||||||||||||    
T  21488318 agtcaaatatttcttataaata 21488297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 338 - 443
Target Start/End: Complemental strand, 36286177 - 36286073
Alignment:
Q  338 ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttctta 437  Q
    |||| |||||| ||| ||||| ||||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||| ||||| | || | |||||||    
T  36286177 ttgactttttagattaattgagtaattgatgtatcatgtctagaatatagaccaactacatcatttatgcaatgaatca-aaaaaatcaagtatttctta 36286079  T
Q  438 taaata 443  Q
    ||||||    
T  36286078 taaata 36286073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 324 - 443
Target Start/End: Complemental strand, 3814103 - 3813984
Alignment:
Q  324 tttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaag 423  Q
    |||||||||||||||||| |||||| |||  |||||||||| |||||  | || |||||||||||| |||||||| ||||||||||| ||| | |||||     
T  3814103 tttataagaaaaaattgactttttagattcgttgaataattaatgtacttggtatagaatatagactaaatacattatttatgcaataaataaaaaaaaa 3814004  T
Q  424 ttaaatgtttcttataaata 443  Q
    | |||||||| |||||||||    
T  3814003 tcaaatgttttttataaata 3813984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 335 - 446
Target Start/End: Complemental strand, 34297295 - 34297185
Alignment:
Q  335 aaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttc 434  Q
    ||||||| |||||| ||| ||| | |||||||||| |||||| || |||||||| ||| ||||||||||||||||||||| | ||||||| |||| ||||    
T  34297295 aaattgactttttagattcattaagtaattgatgtgtcttgtctaaaatatagatcaattacatcatttatgcaatgaatta-aaaaagtcaaatatttc 34297197  T
Q  435 ttataaataaga 446  Q
    ||||||||||||    
T  34297196 ttataaataaga 34297185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 13665036 - 13664960
Alignment:
Q  366 atgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| ||| | ||||||| ||||||||||||||||||    
T  13665036 atgtatgttgtttagaatatagatcaaatacatcatttatgcaattaatta-aaaaagtcaaatgtttcttataaata 13664960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 322 - 422
Target Start/End: Original strand, 18718252 - 18718355
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagacca---aatacatcatttatgcaatgaatcaga 418  Q
    ||||||||||||||| || |  ||||||||||||||| ||||| ||||||||||| ||||||||||||||   |||| |||||||||||||| ||||| |    
T  18718252 tatttataagaaaaatttaacattttaaatttattgagtaattaatgtatcttgtctagaatatagaccaaataatatatcatttatgcaataaatcaaa 18718351  T
Q  419 aaaa 422  Q
    ||||    
T  18718352 aaaa 18718355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 318 - 414
Target Start/End: Complemental strand, 36434816 - 36434720
Alignment:
Q  318 gttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    ||||||||||||||||||| || | |||||| ||| ||| | ||||||||||||||||| || |||||| |||||||| |||||||||| |||||||    
T  36434816 gttttatttataagaaaaatttaactttttagattcattaagtaattgatgtatcttgtctaaaatataaaccaaatatatcatttatgtaatgaat 36434720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 344 - 439
Target Start/End: Complemental strand, 919754 - 919660
Alignment:
Q  344 ttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttata 439  Q
    ||||| ||| ||||| |||||||||||||| || ||||||||||||||||||||||||||||  ||||||||| ||||||| |||| |||| ||||    
T  919754 ttttagattcattgagtaattgatgtatctagtatagaatatagaccaaatacatcatttattgaatgaatca-aaaaagtcaaatatttcctata 919660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 321 - 443
Target Start/End: Original strand, 16619030 - 16619152
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaa-atttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaa 419  Q
    |||||||||||||||| |||| ||||| | |||  |||| ||||||||||||| ||| ||||||| |||||||||| |||||||||||||| ||||| ||    
T  16619030 ttatttataagaaaaatttgatttttttagattcgttgagtaattgatgtatcatgtctagaatagagaccaaatatatcatttatgcaataaatca-aa 16619128  T
Q  420 aaagttaaatgtttcttataaata 443  Q
    || || || | |||||||||||||    
T  16619129 aacgtcaactatttcttataaata 16619152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 319 - 405
Target Start/End: Complemental strand, 8235514 - 8235428
Alignment:
Q  319 ttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttat 405  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||| || ||| | || || |||||| | ||||||||||||||||    
T  8235514 ttttatttataagaaaaaattgattttttagatttattgaataattaatatatttggtctataatataaatcaaatacatcatttat 8235428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 334 - 434
Target Start/End: Complemental strand, 32452350 - 32452252
Alignment:
Q  334 aaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgttt 433  Q
    |||||||| |||||| ||| ||||  ||||| ||||| ||||| ||||||||||||||||||||  ||||||||||||||||  ||||||| ||||||||    
T  32452350 aaaattgactttttatattcattgcgtaattaatgtagcttgtctagaatatagaccaaatacaatatttatgcaatgaatc--aaaaagtcaaatgttt 32452253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 361 - 435
Target Start/End: Complemental strand, 18391593 - 18391520
Alignment:
Q  361 aattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttct 435  Q
    |||| |||||||||||||| |||||||| ||||||||| ||||||||||||||||| ||||||| ||||| ||||    
T  18391593 aattaatgtatcttgtttataatatagatcaaatacattatttatgcaatgaatca-aaaaagtcaaatgcttct 18391520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 321 - 443
Target Start/End: Complemental strand, 32902903 - 32902782
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    ||||||||||||||||||||  |||||||||| ||||||||||| || |||    | || ||||||||| ||||| || |||||| |||| ||||| |||    
T  32902903 ttatttataagaaaaaattgtctttttaaattcattgaataattaatatattcgatatataatatagactaaatatattatttatacaattaatca-aaa 32902805  T
Q  421 aagttaaatgtttcttataaata 443  Q
    | ||||| |||||||||||||||    
T  32902804 aggttaattgtttcttataaata 32902782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 15968325 - 15968440
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||| |||||||| |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  15968325 tatttataagaaaaagttaattttttagattcattcaataattaatgtatctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 15968422  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  15968423 agtaaattgtttcttata 15968440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 27488361 - 27488476
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| |||||||||||||||| |  ||||| |||||||||||| ||||  |||  ||||||||| ||||    
T  27488361 tatttataagaaaaaattaattttttagattcattcaataattgatgtatctagcctagaa-atagaccaaatatatcaactattgaatgaatca-aaaa 27488458  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  27488459 agtaaattgtttcttata 27488476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 322 - 446
Target Start/End: Complemental strand, 29031170 - 29031048
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| || |||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  29031170 tatttataagaaaaagttaactttttagattcattcaacaattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 29031073  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    ||| || ||||||||||| ||||||    
T  29031072 agtaaattgtttcttatatataaga 29031048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 322 - 421
Target Start/End: Complemental strand, 14913240 - 14913141
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||||||| ||||| ||||| || ||| |  | || |||||||||||||||||| ||| | ||||||||||| ||||    
T  14913240 tatttataagaaaaatttgattttttaaattcattgagtaattaatatatttgatataaaatatagaccaaatacattattcaggcaatgaatcaaaaaa 14913141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 1015289 - 1015174
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| |||||| |||||| ||   |||||| |||||||||||||||||  ||| |||||||||| ||||    
T  1015289 tatttataagaaaaagttaactttttagattcattcaataatcgatgtacctaacttagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 1015192  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  1015191 agtaaattgtttcttata 1015174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 22731392 - 22731277
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||||||| ||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  22731392 tatttataagaaaaagttaattttttagattcattaaataattaatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 22731295  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  22731294 agtaaattgtttcttata 22731277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 414
Target Start/End: Original strand, 39239808 - 39239901
Alignment:
Q  322 tatttataagaaaaaa-ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    |||||||||||||||| |||  |||||| ||| ||||  ||||| ||||||||||| | ||||||||| |||||| || |||||||||||||||    
T  39239808 tatttataagaaaaaaattgtctttttagattcattgtgtaattaatgtatcttgtattgaatatagatcaaatatattatttatgcaatgaat 39239901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 322 - 414
Target Start/End: Original strand, 38362393 - 38362485
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    ||||||||||||||  || | |||||| ||| | |||| |||||||||||||| | || ||||||||| ||||| ||| ||||||||||||||    
T  38362393 tatttataagaaaattttaactttttagattaactgaaaaattgatgtatcttatctaaaatatagactaaatatatcgtttatgcaatgaat 38362485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 20502104 - 20502218
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| |||||| ||| || |||||||| ||||||||| ||   ||||||||| | |||||||| |||  ||||||| || ||||| |    
T  20502104 ttataagaaaaagttgactttttagattcatagaataattaatgtatcttattgtaaatatagactagatacatcacttacacaatgaacca-aaaaaat 20502202  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  20502203 taattgtttcttataa 20502218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 344 - 398
Target Start/End: Complemental strand, 1420769 - 1420715
Alignment:
Q  344 ttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacat 398  Q
    ||||||||||||| ||||||||||||||||| | || | ||||||||||||||||    
T  1420769 ttttaaatttatttaataattgatgtatcttatctatattatagaccaaatacat 1420715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 332 - 398
Target Start/End: Original strand, 14723410 - 14723476
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacat 398  Q
    |||||||| | |||||||||| ||||| |||||||| |||||  | |||||||||||||||||||||    
T  14723410 aaaaaattaactttttaaattcattgagtaattgatatatctaatctagaatatagaccaaatacat 14723476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 322 - 400
Target Start/End: Complemental strand, 26313398 - 26313320
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatca 400  Q
    ||||| |||||||||||| | ||||||||||||||   ||||| |  ||||||||||| |||||||| |||||||||||    
T  26313398 tatttttaagaaaaaatttactttttaaatttattatgtaattaacatatcttgtttacaatatagatcaaatacatca 26313320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 325 - 444
Target Start/End: Complemental strand, 19296089 - 19295970
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaata-catcatttatgcaatgaatcagaaaaag 423  Q
    |||||| ||||| |||| |||||| ||| ||||| ||| | |||||  | || ||||| ||| |||||||| |||||||||| |||||||||| |||||     
T  19296089 ttataaaaaaaagttgactttttagattcattgagtaactaatgtacttggtatagaagatataccaaataacatcatttatccaatgaatca-aaaaaa 19295991  T
Q  424 ttaaatgtttcttataaataa 444  Q
    | ||| |||||||||||||||    
T  19295990 tcaaacgtttcttataaataa 19295970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 325 - 413
Target Start/End: Complemental strand, 24173551 - 24173463
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaa 413  Q
    |||||||||||| |||| ||||||| ||||| |||||||| ||||||||| || | ||||||||  | |||||||| |||  |||||||    
T  24173551 ttataagaaaaagttgactttttaagtttatagaataattaatgtatcttattgaaaatatagattagatacatcacttacacaatgaa 24173463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 326 - 414
Target Start/End: Original strand, 30780084 - 30780172
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    |||||| ||||||| |  ||||||||||||| ||||| |||||||| |||| || |||| |||||  |||||||||||||  |||||||    
T  30780084 tataagcaaaaattcatattttaaatttattcaataaatgatgtatgttgtctacaataaagaccgcatacatcatttattgaatgaat 30780172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 29002873 - 29002759
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| ||||||  ||||| |||||||| || |||||| |  | ||||||||| | |||||||| |||  ||||||| || |||||||    
T  29002873 ttataagaaaaagttgattttttaggtttatggaataattaatatatcttatcgaaaatatagactagatacatcacttacacaatgaacca-aaaaagt 29002775  T
Q  425 taaatgtttcttataa 440  Q
     || ||||||||||||    
T  29002774 caattgtttcttataa 29002759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 33970788 - 33970674
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| | ||||  || || |||||||| |||||| || || | |||||| || ||||||||||||||| |||| ||  | |||||||    
T  33970788 ttataagaaaaagttgattgtttagtttcatagaataattaatgtattttattaaaaatatatactaaatacatcatttatacaataaaata-aaaaagt 33970690  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  33970689 taattgtttcttataa 33970674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 38978759 - 38978873
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| |||||| ||| || |||||||| || |||||| ||   ||||||||| | |||||||| |||  ||||||| || ||||| |    
T  38978759 ttataagaaaaagttgactttttagattcatagaataattaatatatcttattgtaaatatagactagatacatcacttacacaatgaacca-aaaaaat 38978857  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  38978858 taattgtttcttataa 38978873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 415
Target Start/End: Complemental strand, 35154255 - 35154165
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    |||||||| |||||| | ||||||| || ||| || || | |||||||| ||||  ||||||||||||||||| |||||||  ||||||||    
T  35154255 ttataagagaaaattcattttttaagttcattcaacaaataatgtatctagtttctaatatagaccaaatacaccatttattaaatgaatc 35154165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 371
Target Start/End: Original strand, 42069773 - 42069811
Alignment:
Q  333 aaaaattgagtttttaaatttattgaataattgatgtat 371  Q
    ||||||| | |||||||||||||||||||||||||||||    
T  42069773 aaaaattcattttttaaatttattgaataattgatgtat 42069811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 6499995 - 6500044
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtat 371  Q
    ||||||||||||| ||||||  ||||| ||||||| ||||||||||||||    
T  6499995 tatttataagaaacaattgacattttagatttattaaataattgatgtat 6500044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 6604455 - 6604414
Alignment:
Q  323 atttataagaaaaaattgagtttttaaatttattgaataatt 364  Q
    |||||||||||| |||||| |||||||||| |||||||||||    
T  6604455 atttataagaaacaattgactttttaaattcattgaataatt 6604414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 12094371 - 12094252
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||| |||| | |||||||||  ||||  |||||| ||||||| || || ||||||||||| ||||||||  |||  ||| ||||  ||||    
T  12094371 tatttataagaaacaattaattttttaaatc-attgtttaattgttgtatctggtctaaaatatagaccacatacatcaactatttaataaatc-taaaa 12094274  T
Q  422 agttaaatgtttcttataaata 443  Q
    |||| | |||||||||||||||    
T  12094273 agttgattgtttcttataaata 12094252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 381 - 438
Target Start/End: Complemental strand, 14221920 - 14221864
Alignment:
Q  381 aatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttat 438  Q
    |||||| | |||||| |||||||||||||| ||||| ||||||| |||||||||||||    
T  14221920 aatataaatcaaatatatcatttatgcaattaatca-aaaaagtcaaatgtttcttat 14221864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 25408557 - 25408646
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    |||||| ||||||| |  ||||| ||| ||| ||||| |||||||| |||| || |||| |||||| |||||||||||||  ||||||||    
T  25408557 tataagcaaaaattcatattttagattcattcaataaatgatgtatgttgtctacaataaagaccacatacatcatttattgaatgaatc 25408646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 363
Target Start/End: Original strand, 26163975 - 26164016
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataat 363  Q
    ||||||||||||| |||||| |||||| ||||||||||||||    
T  26163975 tatttataagaaacaattgactttttagatttattgaataat 26164016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 8e-33; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 322 - 446
Target Start/End: Original strand, 21662900 - 21663023
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| ||||| |||||  | || |||| |||||||||||||||||||||||||||||||||| ||||    
T  21662900 tatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtatagattatagaccaaatacatcatttatgcaatgaatca-aaaa 21662998  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    |||||||||||||||||||||||||    
T  21662999 agttaaatgtttcttataaataaga 21663023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 322 - 447
Target Start/End: Complemental strand, 35099189 - 35099065
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| ||||  ||||||||||||||  ||||| || |||||||| |||||||||||||||||||||||||||| |||| ||| | ||||    
T  35099189 tatttataagaaaaagttgaccttttaaatttattgtgtaattaatatatcttgtctagaatatagaccaaatacatcatttatacaataaatta-aaaa 35099091  T
Q  422 agttaaatgtttcttataaataagat 447  Q
    |||||||| |||||||||||||||||    
T  35099090 agttaaatatttcttataaataagat 35099065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 45010884 - 45010764
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||| |||||| | |||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| |||| ||||| ||||    
T  45010884 tatttataagagaaaattaattttttagatttattgaataattgatgtatctagtttagaatatagaccacaaacatcatttatacaataaatca-aaaa 45010786  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| |||| |||||||||||||    
T  45010785 agtcaaatatttcttataaata 45010764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 53442041 - 53441921
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||||||| ||||||||||| |||||  | || |||||| || ||||||||||||||||||||||||||||| ||||    
T  53442041 tatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatgcaatgaatca-aaaa 53441943  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  53441942 agtaaaatgtttcttataaata 53441921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 324 - 440
Target Start/End: Complemental strand, 12065041 - 12064926
Alignment:
Q  324 tttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaag 423  Q
    |||||||||||||||||| |||||||||| ||| | ||||| || ||| | || ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  12065041 tttataagaaaaaattgactttttaaattcattaagtaattaatatatttagtatagaatatagaccaaatacatcattaatgcaatgaatca-aaaaag 12064943  T
Q  424 ttaaatgtttcttataa 440  Q
    | |||||||||||||||    
T  12064942 taaaatgtttcttataa 12064926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 322 - 446
Target Start/End: Complemental strand, 23223091 - 23222969
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| ||||| ||| ||||||||||||| || |||||||||||||||||||||||||  ||| ||| | ||||    
T  23223091 tatttataagaaaaaattga-tttttagattcattgagtaactgatgtatcttgtctaaaatatagaccaaatacatcatttatataataaatta-aaaa 23222994  T
Q  422 agttaaatgtttcttataaataaga 446  Q
    ||| |||||||||||||||||||||    
T  23222993 agtcaaatgtttcttataaataaga 23222969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 322 - 447
Target Start/End: Original strand, 36985170 - 36985294
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  || | |||| | |||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  36985170 tatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatgcaatgaatca-aaaa 36985268  T
Q  422 agttaaatgtttcttataaataagat 447  Q
    ||| |||  |||||||||||| ||||    
T  36985269 agtcaaaaatttcttataaatgagat 36985294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 322 - 447
Target Start/End: Original strand, 37010609 - 37010733
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  || | |||| | |||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  37010609 tatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatgcaatgaatca-aaaa 37010707  T
Q  422 agttaaatgtttcttataaataagat 447  Q
    ||| |||  |||||||||||| ||||    
T  37010708 agtcaaaaatttcttataaatgagat 37010733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 322 - 456
Target Start/End: Original strand, 44518050 - 44518182
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||  |||| |||||| ||| ||||| ||||| ||||||||||| || ||||||||||||||||||||||||  |||||||||| ||||    
T  44518050 tatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttagacaatgaatca-aaaa 44518148  T
Q  422 agttaaatgtttcttataaataagatcagaaggaa 456  Q
    ||| |||  ||||||||||||| || |||||||||    
T  44518149 agtcaaagttttcttataaatagga-cagaaggaa 44518182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 322 - 437
Target Start/End: Complemental strand, 12747831 - 12747717
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||||| |||||| ||| || || |||||||||||| | || ||||||||| ||||||||||  ||||||||||||||||| ||||    
T  12747831 tatttataagaaaaaattgattttttagattcatcgagtaattgatgtatttggtctagaatatacaccaaatacacaatttatgcaatgaatca-aaaa 12747733  T
Q  422 agttaaatgtttctta 437  Q
    | | ||||||||||||    
T  12747732 aatcaaatgtttctta 12747717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 325 - 443
Target Start/End: Complemental strand, 25910322 - 25910205
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| |||||||||||||||| ||||| |||||| | || |||||||||||||||||||||  |||||||| ||||| | ||||  |    
T  25910322 ttataagaaaaagttgactttttaaatttattgagtaattaatgtatttggtgtagaatatagaccaaatacattctttatgcagtgaat-aaaaaatct 25910224  T
Q  425 taaatgtttcttataaata 443  Q
     ||||||||||||||||||    
T  25910223 caaatgtttcttataaata 25910205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 322 - 448
Target Start/End: Original strand, 43448972 - 43449097
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| |||||||| |||||||| ||  ||||| |||||||||||||||||| ||||||| || ||||    
T  43448972 tatttataagaaaaagttgattttttagattcattgagtaattgatatatcttgtctatgatataaaccaaatacatcatttatacaatgaacca-aaaa 43449070  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    | | |||| ||||||||||||| ||||    
T  43449071 aatcaaatatttcttataaataggatc 43449097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 51516972 - 51517091
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| || || ||||| |||||  | |  |||||||||||||||||||||||||||||||||||| || ||||    
T  51516972 tatttataagaaaaagttgactttttagatt-atggagtaattaatgtacttggcatagaatatagaccaaatacatcatttatgcaatgaacca-aaaa 51517069  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||||||||||||||||||    
T  51517070 agtcaaatgtttcttataaata 51517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 54537457 - 54537577
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||| | ||| ||||| |||||||||||||| || ||||||||||| ||||||||  ||||||||||||||||| ||||    
T  54537457 tatttataagaaaaatttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaatttatgcaatgaatca-aaaa 54537555  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| ||   |||||||||||||    
T  54537556 agtcaataatttcttataaata 54537577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 319 - 443
Target Start/End: Original strand, 52864962 - 52865085
Alignment:
Q  319 ttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcaga 418  Q
    |||||||||| ||||||| || | |||||| ||| ||||| ||||||||||||||| | || ||||||||| ||||| |||||||||||||||||||| |    
T  52864962 ttttatttatgagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagactaaatatatcatttatgcaatgaatca-a 52865060  T
Q  419 aaaagttaaatgtttcttataaata 443  Q
    |||||| || | ||| |||||||||    
T  52865061 aaaagtcaattattttttataaata 52865085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 373 - 443
Target Start/End: Complemental strand, 9197164 - 9197095
Alignment:
Q  373 ttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||| |||||||||||||    
T  9197164 ttgtttagaatatagacaaaatacatcatttatgcaatgaatca-aaaaagtcaaatatttcttataaata 9197095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 43343455 - 43343580
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaa-----atacatcatttatgcaatgaatca 416  Q
    |||||||||||||||||||| |||||| ||| ||||  ||||| ||||||||  | |||||||||||||||      |||||||||||| ||||||||||    
T  43343455 tatttataagaaaaaattgactttttagattaattgcgtaattaatgtatctactctagaatatagaccaattggtgtacatcatttatacaatgaatca 43343554  T
Q  417 gaaaaagttaaatgtttcttataaata 443  Q
     ||||||| ||||||||||||||||||    
T  43343555 -aaaaagtcaaatgtttcttataaata 43343580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 49885393 - 49885508
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||||||||||||||| | |||||| ||| ||| |||||||||||||||| || ||||| ||||||||||||||||| |||| || | ||||| ||||    
T  49885393 tatttataagaaaaaattaattttttagattcattcaataattgatgtatctagtctagaa-atagaccaaatacatcaattatccacttaatca-aaaa 49885490  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  49885491 agtaaattgtttcttata 49885508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 322 - 443
Target Start/End: Original strand, 51723392 - 51723512
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||| ||| ||||| ||||| |||||| |  | |||||||||||| ||||| ||||||||| |||||||||| ||||    
T  51723392 tatttataagaaaaagttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttatacaatgaatca-aaaa 51723490  T
Q  422 agttaaatgtttcttataaata 443  Q
    |||||||| |||| ||| ||||    
T  51723491 agttaaatttttcctattaata 51723512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 322 - 410
Target Start/End: Complemental strand, 53357423 - 53357334
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaa-taattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaat 410  Q
    ||||| |||||||| ||||| |||||| |||||||| | |||||||| |||||||| |||||||||||||||||| ||||||||||||||    
T  53357423 tatttgtaagaaaacattgactttttagatttattggagtaattgatctatcttgtctagaatatagaccaaatatatcatttatgcaat 53357334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 332 - 444
Target Start/End: Complemental strand, 25954146 - 25954035
Alignment:
Q  332 aaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||| ||| |||||||||| ||||| ||||| ||||||||||| ||||||||||| |||||| |||||||||  ||||||| | ||||||| |||  |    
T  25954146 aaaaaaatgattttttaaattcattgagtaattaatgtatcttgtctagaatatagatcaaatatatcatttatataatgaatta-aaaaagtcaaacat 25954048  T
Q  432 ttcttataaataa 444  Q
    |||||||||||||    
T  25954047 ttcttataaataa 25954035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 322 - 444
Target Start/End: Complemental strand, 19649713 - 19649592
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||| |||||| | |||| |||||| ||| ||||| ||||||||||||   || || ||||||||| |||||||||| |||| |||||||||| ||||    
T  19649713 tatttacaagaaacatttgattttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacatcaattattcaatgaatca-aaaa 19649615  T
Q  422 agttaaatgtttcttataaataa 444  Q
    ||| ||||||||||| |||||||    
T  19649614 agtcaaatgtttcttgtaaataa 19649592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 322 - 448
Target Start/End: Complemental strand, 33808443 - 33808319
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||| | | ||||||||| |||||| || || ||||||||||| ||| | ||||    
T  33808443 tatttataagaaaaa-ttgactttttaaattaattgaataattgatgtatttggattagaatattgaccaagtatattatttatgcaataaat-aaaaaa 33808346  T
Q  422 agttaaatgtttcttataaataagatc 448  Q
    | | |||| ||| ||||||||| ||||    
T  33808345 aatcaaatattttttataaataggatc 33808319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 321 - 410
Target Start/End: Original strand, 40460358 - 40460448
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattga-tgtatcttgtttagaatatagaccaaatacatcatttatgcaat 410  Q
    ||||||||||||||||||| | |||||| ||| ||||  ||||| | ||||||||||||| ||||||||||||||||||||||||| ||||    
T  40460358 ttatttataagaaaaaattaactttttagattcattgtgtaattaaatgtatcttgtttaaaatatagaccaaatacatcatttatacaat 40460448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 366 - 443
Target Start/End: Complemental strand, 13622577 - 13622501
Alignment:
Q  366 atgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    ||||||||||| || ||||||||||||||| ||||||||||||||||| |  ||||||| ||||||||||||||||||    
T  13622577 atgtatcttgtgtaaaatatagaccaaatatatcatttatgcaatgaa-ctaaaaaagtcaaatgtttcttataaata 13622501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 325 - 446
Target Start/End: Original strand, 9236103 - 9236224
Alignment:
Q  325 ttataagaaaaaa-ttgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaag 423  Q
    ||||||||||||| || | |||||  ||| ||||| ||||||||||||||  | |||||||||||| ||||| |||||||||| ||||||||| ||||||    
T  9236103 ttataagaaaaaagttaacttttttgattcattgagtaattgatgtatctgatatagaatatagactaaatatatcatttatgtaatgaatca-aaaaag 9236201  T
Q  424 ttaaatgtttcttataaataaga 446  Q
    | |||| |||| |||| ||||||    
T  9236202 tcaaatatttcgtatatataaga 9236224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 322 - 439
Target Start/End: Complemental strand, 29457973 - 29457858
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||| ||| ||| ||| ||||||||| || || ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  29457973 tatttataagaaaaagttaactttttagattcattcaatgattgatgtacctagtctagaa-atagaccaaatacatcaactattcaatgaatca-aaaa 29457876  T
Q  422 agttaaatgtttcttata 439  Q
    ||| || |||||||||||    
T  29457875 agtaaattgtttcttata 29457858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 322 - 422
Target Start/End: Original strand, 33371875 - 33371974
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||| || | |||||||||||||| ||||||||||||| || |  || || |||||||||||||||||  ||| |||||||||| ||||    
T  33371875 tatttataagaaaaagttaattttttaaatttattcaataattgatgtacctagccta-aaaatagaccaaatacatcaactattcaatgaatcaaaaaa 33371973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 327 - 415
Target Start/End: Original strand, 48593161 - 48593249
Alignment:
Q  327 ataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    |||||||| || ||| |||||| ||  |||||||||||||||||||  || ||||||||||||||||||||| | |||| |||||||||    
T  48593161 ataagaaacaagtgactttttagatacattgaataattgatgtatcgggtctagaatatagaccaaatacataaattattcaatgaatc 48593249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 2544504 - 2544586
Alignment:
Q  354 attgaataattgatgtatcttgtt-tagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttctt 436  Q
    |||||||||||||||||||||||| || | |||||||||||||||||| |||| |||||||||  ||||||| || ||||||||    
T  2544504 attgaataattgatgtatcttgttataaattatagaccaaatacatcacttatacaatgaatc-taaaaagtcaattgtttctt 2544586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 413
Target Start/End: Complemental strand, 32711315 - 32711245
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaa 413  Q
    |||||| ||| |||||||||||||||||||| || || ||||||| |||||||||||| |||| |||||||    
T  32711315 tttttagattcattgaataattgatgtatctggtctataatataggccaaatacatcaattattcaatgaa 32711245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 343 - 443
Target Start/End: Original strand, 8266268 - 8266365
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaat 442  Q
    |||||| ||| ||||| |||||||||||| || | || ||||||  ||||| |||| |||||| |||||||||| ||||||| |||||||||||||||||    
T  8266268 tttttagattcattgagtaattgatgtattttatctaaaatata--ccaaacacattatttatacaatgaatca-aaaaagtcaaatgtttcttataaat 8266364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 28406601 - 28406481
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||| |||||| |||||| ||||||  || ||||||||||| ||||| |  || ||||||||||||||||||||| | |||| ||| |||||  ||||    
T  28406601 tatttacaagaaacaattgactttttaggttcattgaataatttatgtacccggtctagaatatagaccaaatacattaattattcaacgaatc-taaaa 28406503  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||| || |||||||| ||||||    
T  28406502 agtcaattgtttcttgtaaata 28406481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 321 - 446
Target Start/End: Complemental strand, 40198530 - 40198406
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||  ||| |||||| |||||| |||||||||| ||||||||||||| ||  | | | |||||| ||||||| | |||| |||||||| | |||    
T  40198530 ttatttatagtaaacaattgactttttagatttattgaacaattgatgtatctggtcgatattctagaccgaatacataaattattcaatgaat-aaaaa 40198432  T
Q  421 aagttaaatgtttcttataaataaga 446  Q
    || | || ||||||||||||||||||    
T  40198431 aattcaattgtttcttataaataaga 40198406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 324 - 397
Target Start/End: Original strand, 47505231 - 47505304
Alignment:
Q  324 tttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaataca 397  Q
    |||||||||||| ||||| | |||| ||| ||| | ||||| ||||||||||||||||||||||| ||||||||    
T  47505231 tttataagaaaatattgactctttacattcatttactaattaatgtatcttgtttagaatatagatcaaataca 47505304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 400
Target Start/End: Complemental strand, 7136903 - 7136812
Alignment:
Q  308 ctccctccaagttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatca 400  Q
    |||||||||| || |||||||||  |||  |||| |||||||||||||| | ||||| ||||||||| | |||||||||||||||| ||||||    
T  7136903 ctccctccaa-ttctatttataaataaactttgaatttttaaatttattaagtaattaatgtatcttctatagaatatagaccaaacacatca 7136812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 440
Target Start/End: Original strand, 43901598 - 43901712
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    ||||| |||||| |||| ||||||  || || |||||||| ||||||||| || | ||||||||| |  |||||||||||  ||||||| || |||||||    
T  43901598 ttatatgaaaaagttgactttttaggttcatagaataattaatgtatcttattgaaaatatagactaggtacatcatttacacaatgaacca-aaaaagt 43901696  T
Q  425 taaatgtttcttataa 440  Q
    ||| ||||||||||||    
T  43901697 taattgtttcttataa 43901712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 322 - 400
Target Start/End: Complemental strand, 5177899 - 5177822
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatca 400  Q
    |||||||||||||||||| | |||||| ||| ||| ||||||||||||| ||   |||||| |||||||||||||||||    
T  5177899 tatttataagaaaaaattaactttttagattcattcaataattgatgtacctaacttagaa-atagaccaaatacatca 5177822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 20028548 - 20028481
Alignment:
Q  378 tagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaataagat 447  Q
    ||||||||||| ||||||||||||||||| |||||||   ||||||| |||| ||| |||||||||||||    
T  20028548 tagaatatagatcaaatacatcatttatgaaatgaat--aaaaaagtcaaatattttttataaataagat 20028481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 443
Target Start/End: Original strand, 19649589 - 19649713
Alignment:
Q  318 gttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcag 417  Q
    |||||||||| |||||| | |||| |||||  ||| |||||||||||||||||| | || || | | |||||| ||||||||| |||  |||||||||      
T  19649589 gttttatttacaagaaacatttgacttttttgattcattgaataattgatgtatttagtctatattttagaccgaatacatcaattactcaatgaatc-t 19649687  T
Q  418 aaaaagttaaatgtttcttataaata 443  Q
    ||||| | ||||||||||| ||||||    
T  19649688 aaaaaatcaaatgtttcttgtaaata 19649713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 321 - 446
Target Start/End: Original strand, 40198408 - 40198532
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||| |||||| |||||  ||| ||||||||||| ||||||   || |||||||| ||||| |||||||| || | |||| ||||  |||    
T  40198408 ttatttataagaaacaattgaatttttttattcattgaataatttatgtattcggtctagaatatcgaccagatacatcaattgttcaataaatc-taaa 40198506  T
Q  421 aagttaaatgtttcttataaataaga 446  Q
    |||| || |||||  |||||||||||    
T  40198507 aagtcaattgtttactataaataaga 40198532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 321 - 405
Target Start/End: Complemental strand, 28043501 - 28043417
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttat 405  Q
    ||||||||||||||  ||||| | |||| ||| ||||||||||| |||||| | ||||| |||||| ||||||||| ||| ||||    
T  28043501 ttatttataagaaactattgattatttagattcattgaataattaatgtatatggtttaaaatatataccaaatacgtcaattat 28043417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 350 - 385
Target Start/End: Original strand, 16295428 - 16295463
Alignment:
Q  350 atttattgaataattgatgtatcttgtttagaatat 385  Q
    ||||||||||||||||||||||||||| ||||||||    
T  16295428 atttattgaataattgatgtatcttgtctagaatat 16295463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 27302210 - 27302096
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||||| |||| ||||||  || || |||||||| ||||||||  ||   ||||||||| | |||||||| |||| ||||||| || |||||||    
T  27302210 ttataagaaaaagttgactttttaggttcatagaataattaatgtatctaattgtaaatatagactagatacatcacttatacaatgaacca-aaaaagt 27302112  T
Q  425 taaatgtttcttataa 440  Q
    ||| | ||||||||||    
T  27302111 taattctttcttataa 27302096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 440
Target Start/End: Complemental strand, 44118314 - 44118200
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagt 424  Q
    |||||||||| |||||| |||||| ||| |||  |||||| |||||| |||||   ||||||||| | ||||||||||||  |||||||||  |||||||    
T  44118314 ttataagaaacaattgactttttagattcattatataattaatgtatattgttataaatatagactagatacatcatttacacaatgaatc-taaaaagt 44118216  T
Q  425 taaatgtttcttataa 440  Q
     |||| |||| |||||    
T  44118215 caaatatttcctataa 44118200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 384 - 438
Target Start/End: Original strand, 23920678 - 23920731
Alignment:
Q  384 atagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttat 438  Q
    |||||||||||| ||||| ||| |||||||||| ||||||| |||||||||||||    
T  23920678 atagaccaaatatatcatatatacaatgaatca-aaaaagtcaaatgtttcttat 23920731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 414
Target Start/End: Original strand, 29290794 - 29290884
Alignment:
Q  324 tttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaat 414  Q
    |||||||||||||||| | |||||| ||| |||||| || ||||||||||  | || | ||||||| |||||||| | |||| ||||||||    
T  29290794 tttataagaaaaaattcactttttagattcattgaacaactgatgtatctgatctatattatagactaaatacataagttattcaatgaat 29290884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 386
Target Start/End: Original strand, 43014483 - 43014533
Alignment:
Q  336 aattgagtttttaaatttattgaataattgatgtatcttgtttagaatata 386  Q
    |||||| |||||| |||||||||||||||||||||||  || |||||||||    
T  43014483 aattgactttttatatttattgaataattgatgtatcaggtctagaatata 43014533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 27707192 - 27707281
Alignment:
Q  326 tataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    |||||| ||||||| |  ||||||||| ||| ||||| |||| ||| |||| || |||| |||||| |||||||||||||  ||||||||    
T  27707192 tataagcaaaaattcatattttaaattcattcaataaatgatatatattgtctacaataaagaccacatacatcatttattgaatgaatc 27707281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 325 - 374
Target Start/End: Original strand, 46220383 - 46220432
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatctt 374  Q
    ||||||||||||||||| |||||| ||| || |||||||| |||||||||    
T  46220383 ttataagaaaaaattgattttttatattcatagaataattaatgtatctt 46220432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 50660069 - 50660020
Alignment:
Q  325 ttataagaaaaaattgagtttttaaatttattgaataattgatgtatctt 374  Q
    |||||||||||| |||| |||||| |||||| |||||||| |||||||||    
T  50660069 ttataagaaaaagttgactttttagatttatagaataattaatgtatctt 50660020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 321 - 446
Target Start/End: Original strand, 16542 - 16666
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    |||||||||||||||| || | ||||| |||| ||||| ||||||||| ||||||  ||||||||||||||||||||| |||||| |||||||||| |||    
T  16542 ttatttataagaaaaatttaacttttttaattcattgagtaattgatgcatcttgactagaatatagaccaaatacattatttatacaatgaatca-aaa 16640  T
Q  421 aagttaaatgtttcttataaataaga 446  Q
    |||| ||| |||||||||||||||||    
T  16641 aagtcaaacgtttcttataaataaga 16666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 58; Significance: 7e-24; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 322 - 443
Target Start/End: Complemental strand, 156902 - 156782
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    ||||||||||||||||| || ||||||  || ||||| ||||| |||||  | || |||||||||||||||||| ||| |||||||||||||| | ||||    
T  156902 tatttataagaaaaaatagattttttagtttcattgagtaattaatgtacttggtatagaatatagaccaaatatatcgtttatgcaatgaatta-aaaa 156804  T
Q  422 agttaaatgtttcttataaata 443  Q
    ||||||||||||||||||||||    
T  156803 agttaaatgtttcttataaata 156782  T

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Target: scaffold0236 (Bit Score: 55; Significance: 5e-22; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 345 - 431
Target Start/End: Complemental strand, 16762 - 16677
Alignment:
Q  345 tttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||||| ||||| ||||||||||||||||| |||||||||||||||||||||  |||||||||||||||| ||||||| ||||||    
T  16762 tttaaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatattttatgcaatgaatca-aaaaagtcaaatgt 16677  T

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Target: scaffold0110 (Bit Score: 55; Significance: 5e-22; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 55; E-Value: 5e-22
Query Start/End: Original strand, 321 - 443
Target Start/End: Complemental strand, 1667 - 1547
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaa 420  Q
    ||||||||||||||||||| | |||||| ||| |||||||||||||||||| | || |||| |||||| ||||| |||||||||||||| |||||| |||    
T  1667 ttatttataagaaaaaattaattttttagattcattgaataattgatgtat-tagtctagagtatagatcaaatgcatcatttatgcaacgaatca-aaa 1570  T
Q  421 aagttaaatgtttcttataaata 443  Q
    |||| ||||||||  ||||||||    
T  1569 aagtcaaatgttttatataaata 1547  T

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Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 321 - 415
Target Start/End: Original strand, 423261 - 423355
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatc 415  Q
    |||| ||||||||| |||| |  ||||| ||||||||||||||||||| || | | |||||||||||||| ||||||||| |||| |||||||||    
T  423261 ttatatataagaaacaattcatattttagatttattgaataattgatgcatatggattagaatatagaccgaatacatcaattattcaatgaatc 423355  T

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Target: scaffold0778 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 345 - 443
Target Start/End: Complemental strand, 5382 - 5286
Alignment:
Q  345 tttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgtttcttataaata 443  Q
    |||| ||||||||| ||||| |||||   | | ||||||||||||||||||||| ||||||||||| |||   ||||||| ||||||||||||||||||    
T  5382 tttagatttattgagtaattaatgtactatatatagaatatagaccaaatacataatttatgcaatcaat--aaaaaagtcaaatgtttcttataaata 5286  T

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Target: scaffold0086 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 360 - 431
Target Start/End: Original strand, 1489 - 1558
Alignment:
Q  360 taattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaaagttaaatgt 431  Q
    |||||||| |||||||| ||||||||||| |||||||||||||||||| |||||||| ||||||| ||||||    
T  1489 taattgatatatcttgtctagaatatagatcaaatacatcatttatgc-atgaatca-aaaaagtcaaatgt 1558  T

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Target: scaffold0767 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 321 - 387
Target Start/End: Original strand, 3736 - 3802
Alignment:
Q  321 ttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatag 387  Q
    |||| ||||||||||| |||| |||||| ||||||||| |||||||||||| |||| ||||||||||    
T  3736 ttatatataagaaaaatttgactttttacatttattgagtaattgatgtattttgtctagaatatag 3802  T

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Target: scaffold0023 (Bit Score: 39; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 112952 - 112866
Alignment:
Q  327 ataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaa 413  Q
    |||||||| |||||| |||||| ||||||||||||||| ||||||||||||   ||||||||  | ||||||||||| | |||||||    
T  112952 ataagaaacaattgactttttagatttattgaataattaatgtatcttgttataaatatagattagatacatcatttgtacaatgaa 112866  T

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Target: scaffold0242 (Bit Score: 34; Significance: 0.000000002; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 439
Target Start/End: Original strand, 16521 - 16637
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaatcagaaaa 421  Q
    |||||| |||||||| || | |||||| ||| ||| ||||||||||||| || |  ||||| |||||||||||||||||  ||| |||||||||| ||||    
T  16521 tatttacaagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaa 16619  T
Q  422 agttaaatgtttcttata 439  Q
    | | || ||||| |||||    
T  16620 attaaattgtttattata 16637  T

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Target: scaffold0238 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 413
Target Start/End: Original strand, 2539 - 2609
Alignment:
Q  343 tttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatgaa 413  Q
    |||||| ||| ||||| ||||| |||||| |  | ||||||||||| |||||||||| |||||||||||||    
T  2539 tttttagattcattgagtaattaatgtatttgatatagaatatagatcaaatacatcgtttatgcaatgaa 2609  T

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Target: scaffold0070 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 322 - 403
Target Start/End: Original strand, 40159 - 40240
Alignment:
Q  322 tatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcattt 403  Q
    |||||||||| ||||||| | | |||| ||| |||   ||||||||||||||  | || |||||||||||||||||||||||    
T  40159 tatttataaggaaaaattaactctttagattcattatgtaattgatgtatctgatataaaatatagaccaaatacatcattt 40240  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 318 - 411
Target Start/End: Complemental strand, 183930 - 183837
Alignment:
Q  318 gttttatttataagaaaaaattgagtttttaaatttattgaataattgatgtatcttgtttagaatatagaccaaatacatcatttatgcaatg 411  Q
    |||||||||| || ||  |||| | ||||||||| |||||||||||| |||||||  ||||||| | | |||||||||||| | |||| |||||    
T  183930 gttttatttacaaaaattaattaactttttaaatatattgaataatttatgtatcaagtttagatttttgaccaaatacataaattattcaatg 183837  T

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