View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4475-Insertion-2 (Length: 1016)

Name: NF4475-Insertion-2
Description: NF4475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4475-Insertion-2
NF4475-Insertion-2
[»] chr8 (32 HSPs)
chr8 (437-976)||(32662109-32662649)
chr8 (212-440)||(27172091-27172316)
chr8 (224-440)||(17792393-17792606)
chr8 (212-438)||(24937591-24937815)
chr8 (8-108)||(32660789-32660890)
chr8 (279-432)||(6631354-6631507)
chr8 (279-440)||(36672014-36672175)
chr8 (224-440)||(31158744-31158956)
chr8 (285-440)||(36274568-36274723)
chr8 (302-435)||(32238200-32238332)
chr8 (321-430)||(24377585-24377694)
chr8 (304-440)||(17642339-17642475)
chr8 (282-440)||(38803678-38803837)
chr8 (279-440)||(30777276-30777437)
chr8 (304-440)||(43841847-43841984)
chr8 (279-438)||(43460591-43460750)
chr8 (304-438)||(32718961-32719095)
chr8 (282-440)||(7223727-7223886)
chr8 (283-421)||(2273253-2273392)
chr8 (279-440)||(29454147-29454309)
chr8 (279-440)||(29265593-29265755)
chr8 (304-440)||(36835608-36835745)
chr8 (306-390)||(43921398-43921482)
chr8 (401-440)||(6982789-6982828)
chr8 (304-379)||(12980279-12980354)
chr8 (343-440)||(2261318-2261416)
chr8 (282-438)||(29039619-29039776)
chr8 (282-386)||(3053043-3053147)
chr8 (224-257)||(24377501-24377534)
chr8 (214-259)||(35588118-35588163)
chr8 (398-438)||(35754465-35754506)
chr8 (343-439)||(41674790-41674886)
[»] chr1 (55 HSPs)
chr1 (224-440)||(17525626-17525839)
chr1 (212-440)||(32144673-32144896)
chr1 (212-430)||(46707358-46707575)
chr1 (212-435)||(45809620-45809842)
chr1 (224-432)||(44382029-44382234)
chr1 (212-440)||(51610540-51610766)
chr1 (181-432)||(48796175-48796423)
chr1 (212-440)||(30547786-30548012)
chr1 (212-440)||(34100717-34100941)
chr1 (181-432)||(24245494-24245742)
chr1 (279-431)||(25081771-25081923)
chr1 (279-432)||(12178839-12178993)
chr1 (321-438)||(24511862-24511979)
chr1 (323-438)||(42958847-42958962)
chr1 (279-440)||(38261044-38261205)
chr1 (279-440)||(49982460-49982622)
chr1 (304-438)||(18992616-18992750)
chr1 (279-441)||(26423844-26424006)
chr1 (304-423)||(9176719-9176838)
chr1 (279-440)||(25702439-25702601)
chr1 (271-440)||(42275339-42275509)
chr1 (279-440)||(52345603-52345765)
chr1 (332-398)||(29852235-29852301)
chr1 (313-439)||(29953677-29953803)
chr1 (283-440)||(35910407-35910565)
chr1 (332-378)||(52365649-52365695)
chr1 (304-421)||(10178895-10179012)
chr1 (344-440)||(34038165-34038262)
chr1 (282-440)||(3150189-3150348)
chr1 (282-440)||(20280465-20280624)
chr1 (282-440)||(33828868-33829027)
chr1 (282-440)||(33838939-33839098)
chr1 (303-440)||(9222858-9222996)
chr1 (303-440)||(48868066-48868204)
chr1 (283-440)||(50239281-50239439)
chr1 (271-438)||(8396581-8396749)
chr1 (304-440)||(41321271-41321408)
chr1 (304-440)||(41550151-41550288)
chr1 (313-390)||(2665468-2665547)
chr1 (282-390)||(17376599-17376707)
chr1 (304-438)||(17644396-17644528)
chr1 (279-438)||(42647637-42647796)
chr1 (344-440)||(51184345-51184441)
chr1 (271-432)||(2249599-2249761)
chr1 (224-259)||(42959006-42959041)
chr1 (279-440)||(52180473-52180635)
chr1 (279-325)||(31401596-31401642)
chr1 (313-391)||(38862437-38862514)
chr1 (304-440)||(9259820-9259957)
chr1 (224-257)||(24511778-24511811)
chr1 (304-440)||(31570975-31571112)
chr1 (282-386)||(33771705-33771809)
chr1 (304-440)||(40850287-40850424)
chr1 (282-386)||(49739374-49739478)
chr1 (224-257)||(52365756-52365789)
[»] chr2 (32 HSPs)
chr2 (181-440)||(17821667-17821924)
chr2 (212-431)||(4114676-4114891)
chr2 (181-435)||(10456056-10456307)
chr2 (212-432)||(38617740-38617955)
chr2 (224-432)||(16114476-16114681)
chr2 (283-440)||(33494178-33494338)
chr2 (279-431)||(14947405-14947557)
chr2 (283-399)||(16637074-16637188)
chr2 (313-440)||(19268570-19268697)
chr2 (303-440)||(36049468-36049606)
chr2 (283-390)||(6438226-6438334)
chr2 (304-440)||(44068279-44068415)
chr2 (282-440)||(5084843-5085002)
chr2 (282-440)||(6657689-6657848)
chr2 (279-438)||(22594977-22595136)
chr2 (304-391)||(6588289-6588376)
chr2 (279-391)||(2283219-2283330)
chr2 (279-391)||(4108547-4108659)
chr2 (282-390)||(1860171-1860279)
chr2 (282-440)||(2316842-2317001)
chr2 (279-426)||(5615624-5615771)
chr2 (279-441)||(8362404-8362567)
chr2 (282-440)||(16814855-16815014)
chr2 (282-440)||(16854135-16854294)
chr2 (286-386)||(21425457-21425557)
chr2 (282-440)||(40533495-40533654)
chr2 (304-391)||(2307330-2307416)
chr2 (279-440)||(18576304-18576466)
chr2 (347-440)||(12002654-12002747)
chr2 (304-390)||(12547633-12547719)
chr2 (304-440)||(28394334-28394471)
chr2 (304-440)||(35292777-35292914)
[»] chr5 (43 HSPs)
chr5 (181-440)||(32455440-32455696)
chr5 (185-432)||(40584875-40585119)
chr5 (212-440)||(36156019-36156243)
chr5 (212-440)||(17069163-17069387)
chr5 (212-422)||(2270806-2271012)
chr5 (212-422)||(10400723-10400928)
chr5 (181-390)||(39041360-39041566)
chr5 (281-430)||(13645534-13645683)
chr5 (212-431)||(24431813-24432028)
chr5 (323-444)||(38354732-38354852)
chr5 (192-391)||(43059538-43059734)
chr5 (181-413)||(10568512-10568741)
chr5 (321-440)||(1445730-1445849)
chr5 (304-440)||(13091179-13091315)
chr5 (282-440)||(10688637-10688796)
chr5 (283-440)||(9589452-9589610)
chr5 (304-421)||(14967497-14967614)
chr5 (304-432)||(29744168-29744296)
chr5 (282-440)||(37962998-37963157)
chr5 (282-440)||(19126157-19126315)
chr5 (224-310)||(38354847-38354931)
chr5 (279-440)||(40563119-40563281)
chr5 (279-440)||(13119040-13119201)
chr5 (279-440)||(39816509-39816670)
chr5 (304-438)||(41802373-41802507)
chr5 (304-440)||(31588501-31588637)
chr5 (212-380)||(23258593-23258755)
chr5 (282-440)||(25684307-25684466)
chr5 (304-390)||(13588919-13589005)
chr5 (304-438)||(21051327-21051461)
chr5 (304-440)||(22780778-22780915)
chr5 (304-440)||(28769950-28770087)
chr5 (282-440)||(8068323-8068482)
chr5 (279-440)||(29996736-29996898)
chr5 (282-440)||(32624420-32624579)
chr5 (303-395)||(34859484-34859576)
chr5 (271-440)||(2851930-2852100)
chr5 (313-368)||(4839522-4839577)
chr5 (271-440)||(14434822-14434992)
chr5 (397-440)||(33678517-33678560)
chr5 (282-438)||(31236594-31236751)
chr5 (304-441)||(32063528-32063666)
chr5 (400-441)||(3056758-3056799)
[»] chr3 (44 HSPs)
chr3 (212-440)||(50029755-50029981)
chr3 (212-440)||(45635685-45635911)
chr3 (284-440)||(8966177-8966333)
chr3 (224-440)||(52024442-52024654)
chr3 (224-440)||(29806199-29806411)
chr3 (212-427)||(19914212-19914423)
chr3 (212-429)||(23795955-23796168)
chr3 (212-440)||(35748926-35749149)
chr3 (212-440)||(9252030-9252255)
chr3 (192-414)||(8433584-8433802)
chr3 (279-441)||(52162623-52162786)
chr3 (181-439)||(5528840-5529095)
chr3 (192-422)||(54262566-54262793)
chr3 (303-440)||(45927485-45927623)
chr3 (303-440)||(35320364-35320502)
chr3 (224-431)||(45602037-45602249)
chr3 (279-440)||(1129133-1129295)
chr3 (282-440)||(50465716-50465875)
chr3 (271-440)||(41982217-41982387)
chr3 (279-431)||(26456966-26457120)
chr3 (343-440)||(35375515-35375613)
chr3 (304-422)||(41902215-41902333)
chr3 (279-391)||(29384923-29385035)
chr3 (279-438)||(4817082-4817242)
chr3 (282-440)||(32720229-32720389)
chr3 (282-440)||(44962847-44963007)
chr3 (212-259)||(8966093-8966140)
chr3 (313-440)||(52082047-52082174)
chr3 (304-390)||(881990-882076)
chr3 (343-440)||(26409634-26409732)
chr3 (282-390)||(7157093-7157201)
chr3 (304-440)||(15804528-15804665)
chr3 (304-440)||(37567484-37567621)
chr3 (400-441)||(40650433-40650474)
chr3 (283-422)||(19608535-19608675)
chr3 (304-440)||(27647746-27647882)
chr3 (282-440)||(51235765-51235924)
chr3 (279-440)||(33830771-33830933)
chr3 (397-440)||(40474194-40474237)
chr3 (279-440)||(51344613-51344774)
chr3 (398-440)||(26850286-26850328)
chr3 (279-423)||(39252911-39253056)
chr3 (287-440)||(42657817-42657971)
chr3 (302-439)||(48990558-48990696)
[»] chr4 (47 HSPs)
chr4 (224-440)||(34594975-34595187)
chr4 (212-440)||(11038050-11038277)
chr4 (224-440)||(1433811-1434025)
chr4 (271-423)||(28967765-28967917)
chr4 (181-440)||(42881044-42881300)
chr4 (212-439)||(33491606-33491829)
chr4 (224-440)||(43958998-43959210)
chr4 (212-440)||(408241-408465)
chr4 (279-440)||(30060534-30060695)
chr4 (279-440)||(46663567-46663728)
chr4 (212-430)||(51944606-51944820)
chr4 (212-440)||(37748605-37748829)
chr4 (279-391)||(27736641-27736753)
chr4 (224-440)||(46548942-46549155)
chr4 (279-440)||(50776012-50776174)
chr4 (283-440)||(31908686-31908844)
chr4 (320-440)||(50189295-50189415)
chr4 (279-440)||(56303078-56303240)
chr4 (346-438)||(39412175-39412267)
chr4 (304-440)||(36091324-36091460)
chr4 (304-422)||(34936577-34936695)
chr4 (343-440)||(126882-126980)
chr4 (282-438)||(23639242-23639398)
chr4 (304-438)||(56272844-56272978)
chr4 (304-421)||(9858515-9858632)
chr4 (304-440)||(38955046-38955183)
chr4 (304-440)||(42244541-42244678)
chr4 (304-440)||(46630649-46630786)
chr4 (214-259)||(50187677-50187722)
chr4 (304-440)||(52257398-52257535)
chr4 (282-440)||(10778995-10779154)
chr4 (353-432)||(352486-352565)
chr4 (365-432)||(4720798-4720865)
chr4 (279-440)||(5970703-5970865)
chr4 (346-440)||(15060863-15060957)
chr4 (279-432)||(48647031-48647185)
chr4 (365-432)||(50733185-50733252)
chr4 (279-369)||(52940722-52940812)
chr4 (365-440)||(54996430-54996505)
chr4 (304-431)||(55060265-55060392)
chr4 (272-440)||(9356385-9356555)
chr4 (282-370)||(16004608-16004696)
chr4 (304-440)||(24292244-24292381)
chr4 (304-440)||(27636006-27636143)
chr4 (282-390)||(46222047-46222155)
chr4 (275-324)||(50187734-50187783)
chr4 (282-386)||(54505633-54505738)
[»] chr7 (26 HSPs)
chr7 (224-432)||(15591574-15591779)
chr7 (212-440)||(43631059-43631284)
chr7 (212-431)||(16086959-16087174)
chr7 (212-404)||(41742753-41742942)
chr7 (181-439)||(2290926-2291181)
chr7 (224-440)||(15584545-15584757)
chr7 (184-440)||(23561253-23561513)
chr7 (212-440)||(29682216-29682441)
chr7 (224-380)||(17020219-17020371)
chr7 (279-440)||(47258684-47258845)
chr7 (283-440)||(30936098-30936256)
chr7 (212-339)||(30878491-30878617)
chr7 (315-440)||(44963827-44963952)
chr7 (304-440)||(8577928-8578063)
chr7 (283-390)||(42975139-42975247)
chr7 (315-438)||(29273259-29273382)
chr7 (283-421)||(45857498-45857636)
chr7 (313-390)||(41809474-41809551)
chr7 (304-432)||(15877340-15877468)
chr7 (279-440)||(24812322-24812480)
chr7 (279-438)||(37118340-37118499)
chr7 (282-440)||(45196808-45196967)
chr7 (283-421)||(8770393-8770531)
chr7 (303-440)||(25867170-25867308)
chr7 (303-369)||(40379046-40379112)
chr7 (304-440)||(9923336-9923473)
[»] chr6 (12 HSPs)
chr6 (212-438)||(6093829-6094051)
chr6 (212-440)||(31644414-31644638)
chr6 (201-440)||(21970473-21970709)
chr6 (212-440)||(29023623-29023845)
chr6 (181-440)||(18667691-18667950)
chr6 (304-441)||(8376023-8376160)
chr6 (321-440)||(4979104-4979222)
chr6 (212-259)||(12782824-12782871)
chr6 (279-369)||(7344396-7344486)
chr6 (279-440)||(9687016-9687178)
chr6 (224-257)||(4979273-4979306)
chr6 (344-440)||(34969738-34969835)
[»] scaffold0008 (1 HSPs)
scaffold0008 (281-430)||(45316-45465)
[»] scaffold0174 (1 HSPs)
scaffold0174 (313-440)||(32802-32929)
[»] scaffold0775 (1 HSPs)
scaffold0775 (212-259)||(28-75)
[»] scaffold0667 (1 HSPs)
scaffold0667 (279-440)||(73-235)
[»] scaffold0005 (1 HSPs)
scaffold0005 (343-404)||(271010-271071)


Alignment Details
Target: chr8 (Bit Score: 363; Significance: 0; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 437 - 976
Target Start/End: Original strand, 32662109 - 32662649
Alignment:
Q  437 aagtcatcagggtttcaagtaaaggagatatgatattacatatgttatcttatacatttgttgtactnnnnnnnnc-gattttctataaaatcactaatt 535  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||| ||          |||||||||||||||||||||||    
T  32662109 aagtcatcagggtttcaagtaaaggagatatgatattacatatgttatcttatacctctgttgtgctaaaaaaaaaagattttctataaaatcactaatt 32662208  T
Q  536 ttgtttttggaagagcgccatcaaaattgtccttgaagatttacatgaatgtggtggtaagtcgatatatgtcatccacgtggattgaaacataataatg 635  Q
    ||| ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32662209 ttgcttttggaagagcgccatcaaaattgtccttgaagatttacacgaatatggtggtaagtcgatatatgtcatccacgtgcattgaaacataataatg 32662308  T
Q  636 atattcttaacgtaataaattgagagttatatgattattttaaaagactgttttgatatcaaatgactatttttaaagattgttttaaaaatatcgaaga 735  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||  | ||    
T  32662309 atattcttatcgtaataaattgagagttatatgattattttaaaagactgttttgatatcaaatgactattgttaaagattgttttaaaaatatttagga 32662408  T
Q  736 agatgaaatagatggaagatgtgtgttctagaccgagcaaacgctctcagggccactatgcgcaacacaccccc-tcctcgtgaggcgggtgctcatagc 834  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||| ||||||||||||||||||    
T  32662409 agatgaaataggtggaatatgtgtgttctagaccgagcaaacgctctcagggccactacgcacaacacacccccatcctcgcgaggcgggtgctcatagc 32662508  T
Q  835 aaggcagagactcattcaaaccctgaatggtaacatctcccccatggctcctgtgaatctcgcttgacgggtacgattcccaagaatctgcaaccatcga 934  Q
    ||| | |||||||||||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||||| ||||    
T  32662509 aagacggagactcattcaaa-cctaaatggtaacatctcccccat-cctcctgtgaatctcgcttgacggttacgattcccacgaatctgcaaccgtcga 32662606  T
Q  935 tgccggatgtctggcttacaacggcttctgcg-ctccacacta 976  Q
    || || |||| || |||||||||||||||||| ||||||||||    
T  32662607 tgtcgtatgtgtgtcttacaacggcttctgcgcctccacacta 32662649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 4e-81
Query Start/End: Original strand, 212 - 440
Target Start/End: Original strand, 27172091 - 27172316
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||          |||||||| |||||||||||||||||||| ||||||||||||    
T  27172091 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaa---cttattatgattcttataaacaatgaatgatgtgtttttctt 27172187  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||    
T  27172188 atgaaatgatattttctgagatataaatgccgacaaataactatttatttcataaaattgattgttaatgtataaatttaggaagcaggagtaccgatac 27172287  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||||||||||| ||||||||||||||||    
T  27172288 accttaatttattagtgtaccatagaagt 27172316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 224 - 440
Target Start/End: Original strand, 17792393 - 17792606
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    |||||||||||||||||||||||||  |||||||||          |||||||| |||||||||||||||||||| |||||||||||| |||||||||||    
T  17792393 aatagagaactttgattattttatacaataatatgtaaaaaag---cttattatgattcttataaacaatgaatgatgtgtttttcttatgaaatgatat 17792489  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  17792490 tttctgagatataaatgccgacaaataactatttatttcataaaattgattgttaatgtataaatttaggaagcaggagtaccgatacaccttaatttat 17792589  T
Q  424 gagtgtaccatagaagt 440  Q
    |||||||||||||||||    
T  17792590 gagtgtaccatagaagt 17792606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 212 - 438
Target Start/End: Complemental strand, 24937815 - 24937591
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||          |||||||| ||||||||||||||| |||| ||| ||||||||    
T  24937815 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaaa--cttattatgattcttataaacaataaatgatgtatttttctt 24937718  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  || |||||||||| ||||    
T  24937717 atgaaatgatattttctgagatataaatgccgacaaataactatttatttcataaaattgattgttaatgtataaatttaagaagcaggagtaccaatac 24937618  T
Q  412 accttaatttatgagtgtaccatagaa 438  Q
    |||||||||||| ||||||||||||||    
T  24937617 accttaatttataagtgtaccatagaa 24937591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 8 - 108
Target Start/End: Original strand, 32660789 - 32660890
Alignment:
Q  8 ccgacgcagaaaacacgaagagtggtggtggttgtctgatttgccatattgaaatcttgttgaatagtg-aagtgggtgaggagtgatcaaagctttatt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32660789 ccgacgcagaaaacacgaagagtggtggtggttgtctgatttgccatattgaaatcttgttgaatagtgaaagtgggtgaggagtgatcaaagctttatt 32660888  T
Q  107 ac 108  Q
    ||    
T  32660889 ac 32660890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 279 - 432
Target Start/End: Original strand, 6631354 - 6631507
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtta 378  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||| | ||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  6631354 attcttataaacaatgaatgatgcgtttttcttctgaaatcatattttctaaaatataaatgccgacaaataactaattatttcataaaattgatcgtta 6631453  T
Q  379 atgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtacc 432  Q
     | |||| |||||  || || |||||||||||||||| |||||| |||||||||    
T  6631454 gtttatagatttatgaagcaagagtaccgatacacctcaatttacgagtgtacc 6631507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 36672175 - 36672014
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtta 378  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||| | |||||||||||||| | ||||||||||||| ||||||||||| ||||    
T  36672175 attcttataaacaatgaatgatgcgtttttcttctgaaatcatattttctaaaatataaatgccgactagtaactatttatttcataaaattgatagtta 36672076  T
Q  379 atgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     | |||| |||||  || || |||||||| ||||||| |||||| |||||||||||||||||    
T  36672075 gtttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccatagaagt 36672014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 224 - 440
Target Start/End: Original strand, 31158744 - 31158956
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    |||||||||||||||||||||||||||||||||||            ||| ||| |||  ||||||||||||||| |||||||||||| |||||||||||    
T  31158744 aatagagaactttgattattttatatgataatatggcaaaaat----ttactatgattagtataaacaatgaatgatgtgtttttcttatgaaatgatat 31158839  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||| | | |||||||||||| ||||||||||||||||| |||||||| || |||||| |||| |||||| || || |||||| ||||||||| |||||      
T  31158840 tttttaaaatataaatgccggcaaataactatttatttcataaaattaatcgttaatttatagatttaggaagcaagagtactgatacacctcaatttgc 31158939  T
Q  424 gagtgtaccatagaagt 440  Q
    ||||||||| |||||||    
T  31158940 gagtgtaccgtagaagt 31158956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 285 - 440
Target Start/End: Complemental strand, 36274723 - 36274568
Alignment:
Q  285 ataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtat 384  Q
    |||||||||||||| |||||||||||| ||||||  |||||||| | ||||||||| |||| ||||||||||||||| ||||||||||| |||||| |||    
T  36274723 ataaacaatgaatgatgtgtttttcttatgaaatcttattttctaaaatataaatgtcgacgaataactatttatttcataaaattgatcgttaatttat 36274624  T
Q  385 aaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    | |||||| || || |||||||  ||||||| |||||||||| |||| ||||||||    
T  36274623 atatttaggaagcaagagtaccagtacacctcaatttatgagggtacaatagaagt 36274568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 302 - 435
Target Start/End: Original strand, 32238200 - 32238332
Alignment:
Q  302 tgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacagga 401  Q
    |||| ||||| |||||||||||||| | | ||||||| | |||||||||||| ||||||| |||||| |||| |||||| ||||||||||||||||| ||    
T  32238200 tgttcttcttatgaaatgatattttttaaaatataaaagtcgacaaataact-tttatttcataaaaatgatcgttaatttataaatttagaaaacaaga 32238298  T
Q  402 gtaccgatacaccttaatttatgagtgtaccata 435  Q
    ||||| |||||||| |||||||||||||||||||    
T  32238299 gtaccaatacacctcaatttatgagtgtaccata 32238332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 321 - 430
Target Start/End: Original strand, 24377585 - 24377694
Alignment:
Q  321 tattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatt 420  Q
    |||||||| | ||||||||||||| |||||||||||||||| ||||||||||||| || | ||||||||||  || || |||||||| ||||||| ||||    
T  24377585 tattttctaaaatataaatgccgataaataactatttatttcataaaattgattgctagtttataaatttatgaagcaagagtaccggtacacctcaatt 24377684  T
Q  421 tatgagtgta 430  Q
    || |||||||    
T  24377685 tacgagtgta 24377694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 17642339 - 17642475
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||||||||||| | ||||||||  | ||||||| || ||||||| |||||| |||| |||||| |||||||||   ||  | ||||    
T  17642339 tttttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttcataaaaatgatagttaatttataaatttttgaagtaagagt 17642438  T
Q  404 accgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||||||||||  | ||||||| |||||||    
T  17642439 accggtacaccttaatttgcgggtgtaccgtagaagt 17642475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 38803678 - 38803837
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||| |||| ||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| |||||| |||| ||||||    
T  38803678 cttataaacaatgaaatgatgttttttcctt-tgaaatgatgttttctaaaatataaatattgacaaatagctttttatttcataaaagtgatcgttaat 38803776  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     ||||| ||| | |||||| |||||||| |||||   ||||||| ||||||||||||||||    
T  38803777 ttataagttttgtaaaacaagagtaccggtacactaaaatttataagtgtaccatagaagt 38803837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 30777437 - 30777276
Alignment:
Q  279 attcttataaacaatg-aatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||| |||| ||| |||||||| ||| ||||| |||||| | ||||||||    || |||||||| |||||| |||||| |||| |||    
T  30777437 attcttataaacaatgaaatgatgtttttttcttatgagatgatgttttctaaaatataaatattaac-aataactacttatttcataaaa-tgatcgtt 30777340  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatga-gtgtaccatagaagt 440  Q
    |||  ||||||||| ||| |||||||| || ||||||| ||||||||| ||||||| |||||||    
T  30777339 aattcataaatttataaagcaggagtatcggtacacctcaatttatgaggtgtaccgtagaagt 30777276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 43841984 - 43841847
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgttaatgtataaatttagaaaacaggag 402  Q
    |||||||| |||||||||||| | | | ||||||||   || |||||| ||||||||||||||||  |||| |||||| |||||| |||  ||  | |||    
T  43841984 tttttcttatgaaatgatattctataaaatataaatattgataaataattatttattttataaaaaatgatcgttaatttataaaattatgaagaaagag 43841885  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||||||| |||||||||||||| |||||||    
T  43841884 taccaatacaccttattttatgagtgtaccgtagaagt 43841847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 438
Target Start/End: Original strand, 43460591 - 43460750
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||||| || | | |||||||| |||||| ||||||||| | ||||||| | ||||||||| || ||| ||  |||||| |||| |||    
T  43460591 attcttataaacaatgaaatgatat-tttttcttatgaaataatattttctaaaatataaaagtcgacaaatagctcttttttacataaaaatgatcgtt 43460689  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaa 438  Q
    |   |||  |||||  ||||||| |||||| |||||||||||||| | |||||||||||||    
T  43460690 agcttattgatttatgaaacaggtgtaccggtacaccttaatttaagggtgtaccatagaa 43460750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 32719095 - 32718961
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||| ||||||||| | ||||||| | |||||||||  | ||| ||  |||||| |||| |||||  ||| ||||||  ||| ||||||    
T  32719095 tttttcttatgaaataatattttctaaaatataaaagtcgacaaatagttcttttttacataaaaatgatcgttaacttattaatttatgaaataggagt 32718996  T
Q  404 accgatacaccttaatttatgagtgtaccatagaa 438  Q
    |||| |||||||||||||| | ||||||| |||||    
T  32718995 accggtacaccttaatttaagtgtgtaccgtagaa 32718961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 7223727 - 7223886
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  7223727 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 7223825  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| | |||||| |||||||| |||||   || || ||||||||||||||||||    
T  7223826 ttatatattttgtaaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagt 7223886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 421
Target Start/End: Original strand, 2273253 - 2273392
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| || ||| |||||||| | |||||||||||||| | ||| ||||  | ||||||| || ||||||| |||||| |||  ||||||     
T  2273253 ttataaacaatgaaatgatgtttttttcttataaaatgatattttctaaaatacaaatatcaacaaatagctttttatttcataaaaatgacagttaatt 2273352  T
Q  382 tataaatttagaaaacaggagtaccgatacaccttaattt 421  Q
    |||||||||   ||  | |||||||| |||||||||||||    
T  2273353 tataaatttttgaagtaagagtaccggtacaccttaattt 2273392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 29454309 - 29454147
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| || |||||| || | | | ||||||||   ||||||||  ||||||||  ||||||  |||| ||    
T  29454309 attcttataaacaatgaaatgatgt-tttttcttatgcaatgatgttctataaaatataaatattgacaaatagttatttattacataaaaaatgatcgt 29454211  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  || ||||||||||| ||||||||| ||| |||||||||| |||||||    
T  29454210 taatttataaaattatgaagcaggagtaccggtacaccttactttgtgagtgtaccgtagaagt 29454147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 29265755 - 29265593
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttat-aaaattgattgtt 377  Q
    ||||||||||||||||||  |  | |||||||| || ||||||||| | | | |||||||||  || |||||  ||||||||| || |||| |||| |||    
T  29265755 attcttataaacaatgaaatgattttttttcttgtggaatgatattctataaaatataaatgttgataaatagttatttatttcataaaaaatgatcgtt 29265656  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||| |||||| |||  ||||| |||||||| ||||||| | ||| |||||||||  |||||||    
T  29265655 aatttataaaattatgaaacaagagtaccggtacacctcactttgtgagtgtacagtagaagt 29265593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 36835608 - 36835745
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| |||||| |||| |||| |  ||||| |||    
T  36835608 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaatttatatattttgtgaaacaagag 36835707  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| |||||   || || ||||||||||||||||||    
T  36835708 taccggtacactcaaaattgtgagtgtaccatagaagt 36835745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 306 - 390
Target Start/End: Original strand, 43921398 - 43921482
Alignment:
Q  306 tttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt 390  Q
    |||||| |||||||||||||||| | ||| ||||  | ||||||| || ||||||| |||||| |||| ||||||||||| ||||    
T  43921398 tttcttatgaaatgatattttctaaaatacaaatatcaacaaatagctctttatttcataaaaatgatagttaatgtatagattt 43921482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 440
Target Start/End: Complemental strand, 6982828 - 6982789
Alignment:
Q  401 agtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  6982828 agtaccgatacacctcattttatgagtgtaccatagaagt 6982789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 379
Target Start/End: Original strand, 12980279 - 12980354
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaa 379  Q
    |||||||| |||||| ||||||||| | ||||||| ||||||||||| || ||||||  |||||| |||| |||||    
T  12980279 tttttcttatgaaataatattttctaaaatataaaagccgacaaatatctctttattacataaaaatgatcgttaa 12980354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 343 - 440
Target Start/End: Original strand, 2261318 - 2261416
Alignment:
Q  343 gacaaataactatttattttataaaat-tgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||| |||||||||  ||||||  |||| |||||| || ||| |||  || ||||||||||| ||||||| | ||| ||||||||||||||||||    
T  2261318 gacaaatagctatttattacataaaaaatgatcgttaatttacaaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccatagaagt 2261416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 282 - 438
Target Start/End: Complemental strand, 29039776 - 29039619
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||| |||||||| ||| ||||  |||||| | ||||||||   ||||||||||| ||||||| |||||| |||| ||||||    
T  29039776 cttataaacaatgaaatgatgt-tttttcttatgatatgacgttttctaaaatataaatattgacaaataactttttatttcataaaaatgatcgttaat 29039678  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaa 438  Q
     | ||| ||| |  ||||| ||||| || |||||   ||||| ||||||||||||||||    
T  29039677 ttgtaagttttgtgaaacaagagtatcggtacactaaaatttctgagtgtaccatagaa 29039619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 3053043 - 3053147
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||| |||||||| ||| ||||  |||||| | ||||||||   ||||||||||| ||||||| |||||| |||| ||||||    
T  3053043 cttataaacaatgaaatgatgt-tttttcttatgatatgacgttttctaaaatataaatattgacaaataactttttatttcataaaaatgatcgttaat 3053141  T
Q  381 gtataa 386  Q
     |||||    
T  3053142 ttataa 3053147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 24377501 - 24377534
Alignment:
Q  224 aatagagaactttgattattttatatgataatat 257  Q
    ||||||||||||||||||||||||| ||||||||    
T  24377501 aatagagaactttgattattttatacgataatat 24377534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 35588118 - 35588163
Alignment:
Q  214 tatcgttcaaaatagagaactttgattattttatatgataatatgt 259  Q
    ||||| ||| ||||||||| ||||||||||||||| ||||||||||    
T  35588118 tatcgctcataatagagaattttgattattttatacgataatatgt 35588163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 35754506 - 35754465
Alignment:
Q  398 aggagtaccgatacaccttaatttatgag-tgtaccatagaa 438  Q
    ||||||||||||||||||||||||||||| |||||| |||||    
T  35754506 aggagtaccgatacaccttaatttatgagatgtaccgtagaa 35754465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 343 - 439
Target Start/End: Original strand, 41674790 - 41674886
Alignment:
Q  343 gacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgag-tgtaccatagaag 439  Q
    |||||||||| | |||||| ||||||| |||  ||||| |||||||||| ||||   ||||| |||||||||||||||| |||| |||||| ||||||    
T  41674790 gacaaataacaacttatttcataaaat-gatccttaatttataaatttataaaagcagagtatcgatacaccttaatttgtgagatgtaccgtagaag 41674886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 142; Significance: 5e-74; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 5e-74
Query Start/End: Original strand, 224 - 440
Target Start/End: Original strand, 17525626 - 17525839
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    ||||||||||||||||||||||||| ||||||||||          |||||||| |||||||||||||||||||  |||||||||||| |||||||||||    
T  17525626 aatagagaactttgattattttatacgataatatgtaaaaaaa---cttattataattcttataaacaatgaataatgtgtttttcttatgaaatgatat 17525722  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  17525723 tttttgagatataaatgccgacaaataactatttatttcataaaattgattgttaatgtataaatttaggaagcaggagtaccgatacaccttaatttat 17525822  T
Q  424 gagtgtaccatagaagt 440  Q
    || ||||||||||||||    
T  17525823 gaatgtaccatagaagt 17525839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 32144896 - 32144673
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatt-attcttataaacaatgaatggtgtgtttttct 310  Q
    ||||||| ||| ||||||||||||||||||||||||| || |||||||             |||||| |||||||||||||||||||| |||||||||||    
T  32144896 tttatcgctcataatagagaactttgattattttatacgaaaatatgtaaaaaaa------attattgattcttataaacaatgaatgatgtgtttttct 32144803  T
Q  311 tctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgata 410  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||| | || ||||| ||||||||    
T  32144802 tatgaaatgatattttctgagatataaatgccgacaaataactatttatttcataaagttgattgttaatatataaattttggaagcaggaataccgata 32144703  T
Q  411 caccttaatttatgagtgtaccatagaagt 440  Q
    ||||||||||||||||||||||||||||||    
T  32144702 caccttaatttatgagtgtaccatagaagt 32144673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 212 - 430
Target Start/End: Complemental strand, 46707575 - 46707358
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||||| |||||||||||||||||| ||||||||||          |||||||| | |||||||||||||||||| ||||||||||||    
T  46707575 tttatcgctcataatagaaaactttgattattttatacgataatatgtaaaaaaaaa-cttattatgactcttataaacaatgaatgatgtgtttttctt 46707477  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
     |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| || ||||||||||| |||    
T  46707476 atgaaatgatattttctgagatacaaatgccgacaaataactttttatttcataaaattgattgttaatgcataaatttaggaagcaggagtaccggtac 46707377  T
Q  412 accttaatttatgagtgta 430  Q
    |||||||||||||||||||    
T  46707376 accttaatttatgagtgta 46707358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 212 - 435
Target Start/End: Original strand, 45809620 - 45809842
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||          |||||||| |||||||||||||| ||||| || |||||| ||    
T  45809620 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaaaa-cttattatgattcttataaacaaagaatgatgggtttttatt 45809718  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
     | |||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || || ||||||||||||    
T  45809719 ataaaatgatactttctaagatataaatgccgacaaataactatttatttcataaaattgattgttaatgtataaatttaggaagcatgagtaccgatac 45809818  T
Q  412 accttaatttatgagtgtaccata 435  Q
    | ||||||||||||||||||||||    
T  45809819 atcttaatttatgagtgtaccata 45809842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 224 - 432
Target Start/End: Complemental strand, 44382234 - 44382029
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    ||||||||||||||||||||||||| ||||||||||          |||||||| | |||||||||||||||||| ||||||||| || |||||||||||    
T  44382234 aatagagaactttgattattttatacgataatatgtaaaaaaaa--cttattatgactcttataaacaatgaatgatgtgttttttttatgaaatgatat 44382137  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| ||||| |||||||| |||||||||||||||    
T  44382136 tttctgagatacaaatgc-gacaaataactttttatttcataaaattgattgttaatgcataaatttaggaaacatgagtaccggtacaccttaatttat 44382038  T
Q  424 gagtgtacc 432  Q
    |||||||||    
T  44382037 gagtgtacc 44382029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 51610766 - 51610540
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| || |||||||||    
T  51610766 tttatcgctcataatagagaactttgattattttatacgataatatgtaataaaa----ttactatgattcttataaacaatgaatgatgcgtttttctt 51610671  T
Q  312 ctgaaatgatattttctgagatata--aatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgat 409  Q
    ||||||| ||||||||| | |||||  ||||||||||||||||||||||||| |||||||||||||||| | ||||||||||  || || ||||||||||    
T  51610670 ctgaaatcatattttctaaaatatataaatgccgacaaataactatttatttcataaaattgattgttagtttataaatttatgaagcaagagtaccgat 51610571  T
Q  410 acaccttaatttatgagtgtaccatagaagt 440  Q
    |||||| |||||| || |||||| |||||||    
T  51610570 acacctcaatttacgaatgtaccgtagaagt 51610540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 181 - 432
Target Start/End: Original strand, 48796175 - 48796423
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatta 279  Q
    |||||||||| |||| ||| |||||||||| ||| |||| ||| ||||||||||||||||||||||||| ||||||||||           ||| |||||    
T  48796175 caccaaaagcgtcaacgaaataaaattgaatttttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaa----ttactatta 48796270  T
Q  280 ttcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaa 379  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||| | ||||||||| |||||||||||||||||||| |||||||||||  ||||    
T  48796271 ttcttataaacaatgaatgatgtgtttttcttatgaaatgatattttctaaaatataaatgtcgacaaataactatttatttcataaaattgatcattaa 48796370  T
Q  380 tgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtacc 432  Q
    | |||| |||| | |   | |||||||| ||||||| | |||| |||||||||    
T  48796371 tttatagatttgggatggaagagtaccggtacacctcattttacgagtgtacc 48796423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 212 - 440
Target Start/End: Original strand, 30547786 - 30548012
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||            || ||| |||||||||||||||||||| || |||||||||    
T  30547786 tttatcgttcataatagagaactttgattattttatacgataatatgtaaaaaaaaaa--tactatgattcttataaacaatgaatgatgcgtttttctt 30547883  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | ||||||||| |||||||||||||||||||| ||||||||||| |||| | |||| |||||  || || |||||||  |||    
T  30547884 ctgaaatcatattttctaaaatataaatgtcgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtacctgtac 30547983  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| ||||||||| |||||||    
T  30547984 acctcaatttacgagtgtaccgtagaagt 30548012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 34100941 - 34100717
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| || |||||||||    
T  34100941 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaa----ttactatgattcttataaacaatgaatgatgcgtttttctt 34100846  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | ||||||||| |||||||||||||||||||| ||||||||||| |||| | |||| |||||  || ||  ||||||| |||    
T  34100845 ctgaaatcatattttctaaaatataaatgtcgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaatagtaccggtac 34100746  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| ||||||  ||||||||||||||||    
T  34100745 acctcaatttacaagtgtaccatagaagt 34100717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 181 - 432
Target Start/End: Complemental strand, 24245742 - 24245494
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatta 279  Q
    |||||||||| ||||  || |||||||||| ||| |||| ||| ||| || |||||||||||||||||| ||||||||||           ||||||| |    
T  24245742 caccaaaagcgtcaacaaaataaaattgaatttttatcgctcataatggaaaactttgattattttatacgataatatgtaaaaaat----ttattatga 24245647  T
Q  280 ttcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaa 379  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||||| |||||||||||  ||||    
T  24245646 ttcttataaacaatgaatgatgtgtttttcttatgaaatgatattttctaaaatataaatgctgacaaataactatttatttaataaaattgatcattaa 24245547  T
Q  380 tgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtacc 432  Q
    | |||| ||||  ||   | |||||||||||||||| | |||| |||||||||    
T  24245546 tttatagatttgaaatggaagagtaccgatacacctcattttacgagtgtacc 24245494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 279 - 431
Target Start/End: Complemental strand, 25081923 - 25081771
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtta 378  Q
    ||||||||||||||| |||| || |||||||||||||||| ||||||||| | |||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  25081923 attcttataaacaattaatgatgcgtttttcttctgaaatcatattttctaaaatataaatgccgacaaataattatttatttcataaaattgatcgtta 25081824  T
Q  379 atgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtac 431  Q
     | |||| |||||  ||||| |||||||  ||||||| |||||| ||||||||    
T  25081823 gtttatagatttatgaaacaagagtaccagtacacctcaatttacgagtgtac 25081771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 279 - 432
Target Start/End: Original strand, 12178839 - 12178993
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttc-tgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||| |||||||||||||||  |||||||| ||  |||||| ||||||||| | ||||||||| || ||||||||||||||||| |||||||| || |||    
T  12178839 attcgtataaacaatgaatgaagtgtttttttttatgaaataatattttctaaaatataaatgtcggcaaataactatttatttcataaaattaatcgtt 12178938  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtacc 432  Q
    ||| |||| |||||| || || |||||||| ||||||| |||||  |||||||||    
T  12178939 aatttatagatttaggaagcaagagtaccggtacacctcaatttgcgagtgtacc 12178993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 321 - 438
Target Start/End: Original strand, 24511862 - 24511979
Alignment:
Q  321 tattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatt 420  Q
    |||||||| | ||||||||||| |||||||||||||||||| ||||||||||| |||| | ||||||||||  || || |||||||| ||||||| ||||    
T  24511862 tattttctaaaatataaatgccaacaaataactatttatttcataaaattgatcgttagtttataaatttatgaagcaagagtaccggtacacctcaatt 24511961  T
Q  421 tatgagtgtaccatagaa 438  Q
    || ||||||||| |||||    
T  24511962 tacgagtgtaccgtagaa 24511979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 323 - 438
Target Start/End: Complemental strand, 42958962 - 42958847
Alignment:
Q  323 ttttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaattta 422  Q
    |||||| | |||||||||||||||||||||||||||||| ||||||||||| |||| | |||| |||||  || || |||||||| |||| || ||||||    
T  42958962 ttttctaaaatataaatgccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtacatctcaattta 42958863  T
Q  423 tgagtgtaccatagaa 438  Q
     ||||||| |||||||    
T  42958862 cgagtgtatcatagaa 42958847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 38261044 - 38261205
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| ||| |||||||| | | | |||||||||  |||||||| |||||||||  ||||||  |||| ||    
T  38261044 attcttataaacaatgaaatgatgt-tttttcttatgagatgatattctataaaatataaatgttgacaaatagctatttattacataaaaaatgatcgt 38261142  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  || ||||||||||| ||||||| | |||||||||||||| |||||||    
T  38261143 taat-tataaaattatgaagcaggagtaccggtacacctcactttatgagtgtaccgtagaagt 38261205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 49982622 - 49982460
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||||| |  ||| |||||||  ||| ||| | |||||| | ||||||||   |||||||| ||| |||||| ||||||| |||||||    
T  49982622 attcttataaacaatgaaattatgtttttttctcatgagatggtgttttctaaaatataaatattgacaaatagctacttatttcataaaat-gattgtt 49982524  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatga-gtgtaccatagaagt 440  Q
    ||| |||||||||| | | |||||||| || ||||||| ||||||||| ||||||| |||||||    
T  49982523 aatttataaatttatatagcaggagtatcggtacacctcaatttatgaggtgtaccgtagaagt 49982460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 304 - 438
Target Start/End: Original strand, 18992616 - 18992750
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    ||||| || |||||||||||||||| | |||||||| ||  |||||||||  ||||||||||||| |||| |||||| |||||||||  |||| | || |    
T  18992616 tttttgttatgaaatgatattttctaaaatataaataccagcaaataactccttattttataaaaatgatagttaatttataaatttttaaaataagaat 18992715  T
Q  404 accgatacaccttaatttatgagtgtaccatagaa 438  Q
    ||  ||||||||||| ||  |||||||| ||||||    
T  18992716 actaatacaccttaacttgcgagtgtacgatagaa 18992750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 279 - 441
Target Start/End: Complemental strand, 26424006 - 26423844
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||||| || ||| |||||||| | ||||||| |||||| | ||||||||  |||  ||||||| ||||||| |||||||  ||| ||    
T  26424006 attcttataaacaatgaaatgatgt-tttttcttataaaatgatgttttctaaaatataaatatcgatgaataactctttatttcataaaata-attatt 26423909  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatga-gtgtaccatagaagtc 441  Q
    ||  |||||||||   ||  |||||||||| ||||||||||||||||| ||||||| ||||||||    
T  26423908 aaattataaatttttgaagtaggagtaccggtacaccttaatttatgaggtgtaccgtagaagtc 26423844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 304 - 423
Target Start/End: Complemental strand, 9176838 - 9176719
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    ||||| || ||||||||||||||||||  |||||||  | ||||||| || |||||||| ||||| |||| |||||| |||||||||  |||| | ||||    
T  9176838 tttttattatgaaatgatattttctgacttataaatagccacaaatagctctttattttgtaaaaatgatagttaatttataaatttttaaaataagagt 9176739  T
Q  404 accgatacaccttaatttat 423  Q
    ||| || |||||||| ||||    
T  9176738 accaatccaccttaacttat 9176719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 25702601 - 25702439
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgt 376  Q
    ||||||||||| |||||| || ||| |||||||| ||||||||| || | | | |||||||||  ||||||||  ||||||||||| ||||  |||| ||    
T  25702601 attcttataaataatgaaatgatgt-tttttcttatgaaatgatgttctataaaatataaatgttgacaaatagttatttattttacaaaaaatgatcgt 25702503  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    | || |||||| |||  || || |||||||| ||||||| |||||||||||||||| |||||||    
T  25702502 tgatttataaaattatgaagcaagagtaccggtacacctcaatttatgagtgtaccgtagaagt 25702439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 271 - 440
Target Start/End: Complemental strand, 42275509 - 42275339
Alignment:
Q  271 ttattattattcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttat-aaaa 368  Q
    ||||||| |||||||||||||||||| || ||| |||||||| ||||||||| || | | | |||| |||    |||||||||||||||||| || ||||    
T  42275509 ttattataattcttataaacaatgaaatgatgt-tttttcttatgaaatgatgttctataaaatattaatattaacaaataactatttatttcataaaaa 42275411  T
Q  369 ttgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||||| |||||| |||  || || |||||||| ||||||| | ||| |||||||||| |||||||    
T  42275410 atgatcgttaatttataaaattatgaagcatgagtaccggtacacctcactttctgagtgtaccttagaagt 42275339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 52345765 - 52345603
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttatttta-taaaattgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| |||||||||||| | | | |||||||||  || |||||  ||||||||| |  |||| |||| ||    
T  52345765 attcttataaacaatgaaatgatgt-tttttcttatgaaatgatattctataaaatataaatgttgataaatagttatttatttcacaaaaaatgatcgt 52345667  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  ||||| |||||||| ||||||| | ||| |||||||||| |||||||    
T  52345666 taatttataaaattatgaaacaagagtaccggtacacctcactttgtgagtgtaccgtagaagt 52345603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 398
Target Start/End: Complemental strand, 29852301 - 29852235
Alignment:
Q  332 atataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaaca 398  Q
    ||||||| | |||||||||||||||||||| |||||| ||||||||||| |||  ||||||||||||    
T  29852301 atataaaagtcgacaaataactatttatttcataaaaatgattgttaatttattgatttagaaaaca 29852235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 439
Target Start/End: Complemental strand, 29953803 - 29953677
Alignment:
Q  313 tgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgataca 412  Q
    |||||||||||||||| | ||||||||| ||| ||| |  | ||||||||||||||  ||| |||||| |||||||||| ||||||  |  |  ||||||    
T  29953803 tgaaatgatattttctaaaatataaatgtcgataaagagttctttattttataaaaacgatcgttaatttataaatttaaaaaacaaaaacattgataca 29953704  T
Q  413 ccttaatttatgagtgtaccatagaag 439  Q
    ||| |||||| ||||||||| ||||||    
T  29953703 cctcaatttacgagtgtaccgtagaag 29953677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 283 - 440
Target Start/End: Original strand, 35910407 - 35910565
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| ||  || |||||||| | |||||| ||||||| | ||||||||  | |||||||||| |||||| ||||||| | || ||||||     
T  35910407 ttataaacaatgaaatgacgtttttttcttataaaatgacattttctaaaatataaatatcaacaaataactctttattctataaaaataatagttaatt 35910506  T
Q  382 tataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    || | ||||   ||  |||||||||||||||| |||||||| | ||||||| |||||||    
T  35910507 taaagatttttgaagtaggagtaccgatacactttaatttacgggtgtaccgtagaagt 35910565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 378
Target Start/End: Complemental strand, 52365695 - 52365649
Alignment:
Q  332 atataaatgccgacaaataactatttattttataaaattgattgtta 378  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  52365695 atataaatgccgacaaataactatttatttcataaaattgatcgtta 52365649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 304 - 421
Target Start/End: Complemental strand, 10179012 - 10178895
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||||||||||| | ||||||||  | ||||||| || ||||||  |||||| | || |||||| || | ||||  |||  ||||||    
T  10179012 tttttcttgtgaaatgatattttctaaaatataaatatcaacaaatacctctttattccataaaaataatagttaatttaaagatttttaaagtaggagt 10178913  T
Q  404 accgatacaccttaattt 421  Q
    ||||||||||||||||||    
T  10178912 accgatacaccttaattt 10178895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 344 - 440
Target Start/End: Complemental strand, 34038262 - 34038165
Alignment:
Q  344 acaaataactatttattttataaaat-tgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||||||||||||| ||||||  |||| |||||| |||||| |||  || ||||||||||| ||||||| | ||| |||||||||| |||||||    
T  34038262 acaaataactatttatttcataaaaaatgatcgttaatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagt 34038165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Complemental strand, 3150348 - 3150189
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  3150348 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 3150250  T
Q  381 gtataaatttaga-aaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| ||||||||||||||   || || ||||||||||||||||||    
T  3150249 ttatatattttgtgaaacaagagtaccgatacactcaaaattgtgagtgtaccatagaagt 3150189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 20280465 - 20280624
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||| |||||||| ||| ||||  |||||| | ||||||||   ||||||||||| ||||||| |||||| |||||||||||    
T  20280465 cttataaacaatgaaatgatgt-tttttcttatgatatgacgttttctaaaatataaatattgacaaataactttttatttcataaaaatgattgttaat 20280563  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     ||||| ||| |  ||||| |||||||| |||||   ||||| | |||||||| |||||||    
T  20280564 ttataagttttgtgaaacaagagtaccggtacactaaaatttcttagtgtaccgtagaagt 20280624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Complemental strand, 33829027 - 33828868
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || |||||| || ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  33829027 cttataaacaatgaaatgatg-gttttttttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 33828929  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| | |||||| |||||||| ||||| | || || ||||||||||||||||||    
T  33828928 ttatatattttgtaaaacaagagtaccggtacacttaaaattgtgagtgtaccatagaagt 33828868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 33838939 - 33839098
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || |||||| || ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  33838939 cttataaacaatgaaatgatg-gttttttttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 33839037  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| | |||||| |||||||| ||||| | || || ||||||||||||||||||    
T  33839038 ttatatattttgtaaaacaagagtaccggtacacttaaaattgtgagtgtaccatagaagt 33839098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 9222996 - 9222858
Alignment:
Q  303 gtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt-agaaaacagga 401  Q
    ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| | || |||||| ||||||||| |  ||||| ||    
T  9222996 gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtaatcgttaatttataaattttatgaaacaaga 9222897  T
Q  402 gtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||| |||||   || || ||||||||||||||||||    
T  9222896 gtaccggtacactcaaaattgtgagtgtaccatagaagt 9222858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 48868204 - 48868066
Alignment:
Q  303 gtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttag-aaaacagga 401  Q
    |||||| || ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||||||||| |||| |||| | |||||| ||    
T  48868204 gttttttttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgattgttaatttatatattttgtaaaacaaga 48868105  T
Q  402 gtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||| |||||   || || |||||||| |||||||||    
T  48868104 gtaccggtacactcaaaattgtgagtgtatcatagaagt 48868066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 283 - 440
Target Start/End: Complemental strand, 50239439 - 50239281
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| || ||  |||||||| |||||||||||||| | | ||||||||  | | |||||  | ||||||| |||||| |||| ||||||     
T  50239439 ttataaacaatgaaatgatgcttttttcttatgaaatgatattttttaaaatataaatatcaataaatatttttttatttcataaaaatgatagttaatt 50239340  T
Q  382 tataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||||   ||  | |||||||| |||||||||||||  | ||||||| |||||||    
T  50239339 tataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 50239281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 438
Target Start/End: Original strand, 8396581 - 8396749
Alignment:
Q  271 ttattattattcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat 369  Q
    ||||||| ||||||||||||||| || || ||| |||||||| ||||||| | || | | | ||||||||   |||||||| ||||||| |  ||||||     
T  8396581 ttattatgattcttataaacaattaaatgatgt-tttttcttatgaaatgttgttctataaaatataaatattgacaaatagctatttactacataaaaa 8396679  T
Q  370 -tgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaa 438  Q
     |||| ||| || |||||| |||  || ||||||||||||||||||| | |||||||||||||| |||||    
T  8396680 atgatcgttcatttataaaattaagaagcaggagtaccgatacacctcattttatgagtgtaccgtagaa 8396749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 41321271 - 41321408
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| |||||| |||| |||| |  ||||| |||    
T  41321271 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaatttatatattttgtgaaacaagag 41321370  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| ||||||   || || ||||||||||||||||||    
T  41321371 taccaatacactcaaaattgtgagtgtaccatagaagt 41321408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 41550288 - 41550151
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||| ||||  |||||| | ||||||||   ||||||||||| ||||||| |||||| | || |||||| ||||| ||| |  ||||| |||    
T  41550288 tttttcttatgatatgacgttttctaaaatataaatattgacaaataactttttatttcataaaaataatcgttaatttataagttttgtgaaacaagag 41550189  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| |||||   ||||| ||||||||||||||||||    
T  41550188 taccggtacactaaaatttctgagtgtaccatagaagt 41550151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 2665468 - 2665547
Alignment:
Q  313 tgaaatgatattttctgagatataaatgccgacaa--ataactatttattttataaaattgattgttaatgtataaattt 390  Q
    |||||||||||||||| ||||||||||| ||||||  ||| || ||||||| |||||| |||| |||||| |||| ||||    
T  2665468 tgaaatgatattttctaagatataaatgtcgacaaatatagctctttatttcataaaaatgatcgttaatttatatattt 2665547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 390
Target Start/End: Original strand, 17376599 - 17376707
Alignment:
Q  282 cttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||||  |  |||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| ||||||     
T  17376599 cttataaacaatgaaatgattgtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaatt 17376698  T
Q  382 tataaattt 390  Q
    |||| ||||    
T  17376699 tatatattt 17376707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 17644528 - 17644396
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| ||||||||| |||||| | |||||| |   |||||||||||||||||||||| ||  |||| |||||| |||| |||||  ||| | ||||    
T  17644528 tttttcttatgaaatgatgttttctaaaatataa-tattgacaaataactatttattttatgaa--tgatcgttaatttatatatttatgaaataagagt 17644432  T
Q  404 accgatacaccttaatttatgag-tgtaccatagaa 438  Q
    ||||||||| || ||||| |||| |||||| |||||    
T  17644431 accgatacatctcaatttgtgagatgtaccgtagaa 17644396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 438
Target Start/End: Original strand, 42647637 - 42647796
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||||| |  ||| |||||||| |||||| ||||||||| | ||||||| | |||||| || || ||| ||  |||||| ||||  ||    
T  42647637 attcttataaacaatgaaattatgt-tttttcttatgaaataatattttctaaaatataaaagtcgacaagtagctctttgttacataaaaatgatattt 42647735  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaa 438  Q
    ||  |||  |||||  ||||||| |||||| |||||||||||||| | |||||| ||||||    
T  42647736 aacttattgatttatgaaacaggtgtaccggtacaccttaatttaagggtgtacaatagaa 42647796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 344 - 440
Target Start/End: Original strand, 51184345 - 51184441
Alignment:
Q  344 acaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||||| ||||||| |||||| |||| |||||| |||||||||   ||  | ||||||||  ||||||||| || || |||||||||||||||    
T  51184345 acaaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggcacaccttaaattgtgggtgtaccatagaagt 51184441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 271 - 432
Target Start/End: Complemental strand, 2249761 - 2249599
Alignment:
Q  271 ttattattattcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat 369  Q
    ||||||| ||||||||||||||| || || ||| |||||||| ||||||| | || | | | ||||||||   |||||||| ||||||| |  ||||||     
T  2249761 ttattatgattcttataaacaattaaatgatgt-tttttcttatgaaatgttgttctataaaatataaatattgacaaatagctatttactacataaaaa 2249663  T
Q  370 -tgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtacc 432  Q
     |||| ||| || |||||| |||  |||||||||||||||||||||| | ||| ||||||||||    
T  2249662 atgatcgttcatttataaaattaagaaacaggagtaccgatacacctcattttgtgagtgtacc 2249599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 259
Target Start/End: Complemental strand, 42959041 - 42959006
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgt 259  Q
    ||||||||||||||||||||||||| ||||||||||    
T  42959041 aatagagaactttgattattttatacgataatatgt 42959006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 52180473 - 52180635
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| ||| ||||| || | | | ||||||||   |||||||| |||||||||  ||||||  | || ||    
T  52180473 attcttataaacaatgaaatgatgt-tttttcttatgagatgatgttctataaaatataaattttgacaaatagctatttattacataaaaaattatcgt 52180571  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  || ||||||||||| ||||||| | ||| ||||| ||||||||||||    
T  52180572 taatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtataccatagaagt 52180635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 279 - 325
Target Start/End: Original strand, 31401596 - 31401642
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattt 325  Q
    |||||||||||||||||||| |||||||||||| | |||| ||||||    
T  31401596 attcttataaacaatgaatgatgtgtttttcttataaaatcatattt 31401642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 313 - 391
Target Start/End: Original strand, 38862437 - 38862514
Alignment:
Q  313 tgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattta 391  Q
    ||||||||| |||||| | ||||||||   ||||||||||| ||||||| |||||| |||| |||||| ||||||||||    
T  38862437 tgaaatgatgttttctaaaatataaatattgacaaataactttttatttcataaaa-tgatcgttaatttataaattta 38862514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 9259957 - 9259820
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| |||||| |||| |||| |  ||||| |||    
T  9259957 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaatttatatattttgtgaaacaagag 9259858  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| ||||    || || ||||||||||||||||||    
T  9259857 taccggtacattcaaaattgtgagtgtaccatagaagt 9259820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 24511778 - 24511811
Alignment:
Q  224 aatagagaactttgattattttatatgataatat 257  Q
    ||||||||||||||||||||||||| ||||||||    
T  24511778 aatagagaactttgattattttatacgataatat 24511811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 31571112 - 31570975
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| |||||||| ||||||| | ||||||||   |||||||| || ||||||| || ||| ||||  ||||| |||| |||| |  ||||| |||    
T  31571112 tttttcttatgaaatgacattttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaatttatatattttgtgaaacaagag 31571013  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| |||||   || || ||||||||||||||||||    
T  31571012 taccggtacactcaaaattgtgagtgtaccatagaagt 31570975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 33771809 - 33771705
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||| |||||||| ||| ||||  |||||| | ||||||||   ||||||||||| ||||||| |||||| |||| ||||||    
T  33771809 cttataaacaatgaaatgatgt-tttttcttatgatatgacgttttctaaaatataaatattgacaaataactttttatttcataaaaatgatcgttaat 33771711  T
Q  381 gtataa 386  Q
     |||||    
T  33771710 ttataa 33771705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 40850287 - 40850424
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| |||||| |||| |||| |  ||||| ||     
T  40850287 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaatttatatattttgtgaaacaagaa 40850386  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| |||||   || || ||||||||||||||||||    
T  40850387 taccggtacactcaaaattgtgagtgtaccatagaagt 40850424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 386
Target Start/End: Original strand, 49739374 - 49739478
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||| |||||||| ||| ||||  |||||| | ||||||||   ||||||||| | |||||||||||||| |||| ||||||    
T  49739374 cttataaacaatgaaatgatgt-tttttcttatgatatgacgttttctaaaatataaatattgacaaataaatttttattttataaaaatgatcgttaat 49739472  T
Q  381 gtataa 386  Q
     |||||    
T  49739473 ttataa 49739478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 52365789 - 52365756
Alignment:
Q  224 aatagagaactttgattattttatatgataatat 257  Q
    ||||||||||||||||||||||||| ||||||||    
T  52365789 aatagagaactttgattattttatacgataatat 52365756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 134; Significance: 3e-69; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 181 - 440
Target Start/End: Original strand, 17821667 - 17821924
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatta 279  Q
    |||||||||| |||| |||||||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||||||||          |||||||| |    
T  17821667 caccaaaagcatcaacgaattaaaattgaatttttatcgctcataatagagaactttgattattttatatgataatatgtaaaaaaa---cttattatga 17821763  T
Q  280 ttcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaa 379  Q
     |||||||||||||||||| |||||||||||| |||||||||||||||| ||||| ||||||||| |||||||| ||||||| |||||||||||||||||    
T  17821764 ctcttataaacaatgaatgttgtgtttttcttatgaaatgatattttcttagatacaaatgccgagaaataactttttatttcataaaattgattgttaa 17821863  T
Q  380 tgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    || |||||||||| || || ||||||| ||||||||||||||||||||||||  |||||||    
T  17821864 tgcataaatttaggaagcaagagtaccaatacaccttaatttatgagtgtacagtagaagt 17821924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 212 - 431
Target Start/End: Complemental strand, 4114891 - 4114676
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||           ||||||| |||||||||||||||||||| || |||||||||    
T  4114891 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaaa---ttattatgattcttataaacaatgaatgatgcgtttttctt 4114795  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | ||||||||||||| |||||||||||||||| ||||||||||| |||| | |||| |||||  || || |||||||| |||    
T  4114794 ctgaaattatattttctaaaatataaatgccgataaataactatttatttcataaaattgatcgttagtttatagatttatgaagca-gagtaccgttac 4114696  T
Q  412 accttaatttatgagtgtac 431  Q
    |||  |||||| ||||||||    
T  4114695 acccgaatttacgagtgtac 4114676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 181 - 435
Target Start/End: Complemental strand, 10456307 - 10456056
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatta 279  Q
    |||||||| | |||| ||| |||||||||||||| ||| |||| |||||||||||||||||||| |||| ||||||||||           ||| ||| |    
T  10456307 caccaaaaacgtcaacgaaataaaattgaacttttatctttcataatagagaactttgattattgtatacgataatatgttaaaaat----ttactatga 10456212  T
Q  280 ttcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaa 379  Q
    ||||||||||||||||||| |||||||||||| ||| |  ||||||||| | ||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  10456211 ttcttataaacaatgaatgatgtgtttttcttatgagaatatattttctaaaatataaatgccgataaataactatttatttcataaaattgatagttaa 10456112  T
Q  380 tgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccata 435  Q
    | |||| |||||| ||  |  | ||||| |||||| |||||||||||| |||||||    
T  10456111 tttatagatttaggaagtaaaaataccggtacaccataatttatgagtttaccata 10456056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 212 - 432
Target Start/End: Complemental strand, 38617955 - 38617740
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||||| |||||| ||||||||||||||||||||||           ||| ||| |||| ||||||||||||||| ||||||||||||    
T  38617955 tttatcgctcataatagataactttaattattttatatgataatatgtcaaaatt----ttaatatgattcgtataaacaatgaatgatgtgtttttctt 38617860  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
     |||||||||||||||| | | ||||||| ||||||||||||| |||||| |||||||| ||||||||| |||| |||||  || || |||||||| |||    
T  38617859 atgaaatgatattttctaaaacataaatgacgacaaataacta-ttatttcataaaattaattgttaatttatagatttacgaagcaagagtaccggtac 38617761  T
Q  412 accttaatttatgagtgtacc 432  Q
    |||| |||||| |||||||||    
T  38617760 acctcaatttacgagtgtacc 38617740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 224 - 432
Target Start/End: Complemental strand, 16114681 - 16114476
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    ||||||||||||||||||||||||| ||||||||||           ||| ||| |||||||||||||| ||||| ||  ||||||||||||||| ||||    
T  16114681 aatagagaactttgattattttatacgataatatgtaaaaaaaa---ttactatgattcttataaacaaggaatgatgcatttttcttctgaaatcatat 16114585  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||| | | ||||||| |||||||||||||||||||||| ||||||||||| |||| | |||| |||||   |||| |||||||| ||||||| ||||||     
T  16114584 tttttaaaatataaaggccgacaaataactatttatttcataaaattgatcgttagtttatagatttatggaacaagagtaccggtacacctcaatttac 16114485  T
Q  424 gagtgtacc 432  Q
    |||||||||    
T  16114484 gagtgtacc 16114476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 283 - 440
Target Start/End: Original strand, 33494178 - 33494338
Alignment:
Q  283 ttataaacaatgaatggtgtgttttt-cttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||||| ||| ||||| ||| |||||||||||||||| | |||||||||||||||||||||| ||||| | ||||||||||| ||||||     
T  33494178 ttataaacaatgaatgatgttttttttcttatgaaatgatattttctaaaatataaatgccgacaaataactctttatatcataaaattgatcgttaatt 33494277  T
Q  382 tataaatttagaaaacaggagtaccgatac--accttaatttatgagtgtaccatagaagt 440  Q
    |||||||| |  || || ||||||||||||  |||| |||||| ||||||||| |||||||    
T  33494278 tataaattaaagaagcaagagtaccgatacatacctcaatttacgagtgtaccgtagaagt 33494338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 279 - 431
Target Start/End: Original strand, 14947405 - 14947557
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtta 378  Q
    ||||||||||||||| |||| || ||||||||| |||||| ||||||||| | |||||||||| ||||||||| ||||||||| ||||||||||| ||||    
T  14947405 attcttataaacaattaatgatgcgtttttcttttgaaattatattttctaaaatataaatgctgacaaataattatttatttcataaaattgatcgtta 14947504  T
Q  379 atgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtac 431  Q
     | |||||||||| ||| || |||||||  ||||||| ||||||  |||||||    
T  14947505 gtttataaatttataaagcaagagtaccagtacacctcaatttacaagtgtac 14947557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 283 - 399
Target Start/End: Complemental strand, 16637188 - 16637074
Alignment:
Q  283 ttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgt 382  Q
    |||||||||||||||| ||| |||||||| | |||||||||||||  | ||||||||||| |||||||||| ||||||| |||||||| || |||||| |    
T  16637188 ttataaacaatgaatgatgt-tttttcttat-aaatgatattttcaaaaatataaatgccaacaaataactctttatttcataaaattaatcgttaattt 16637091  T
Q  383 ataaatttagaaaacag 399  Q
     || |||||| ||||||    
T  16637090 gtagatttaggaaacag 16637074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 313 - 440
Target Start/End: Complemental strand, 19268697 - 19268570
Alignment:
Q  313 tgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgataca 412  Q
    |||||| ||||||||| | ||||||||  ||||||||| || ||||||| |||||| |||| |||||| | ||||||||  |||||  | ||| ||||||    
T  19268697 tgaaataatattttctaaaatataaatatcgacaaatagctctttatttcataaaaatgatcgttaatttgtaaatttatgaaacaataatactgataca 19268598  T
Q  413 ccttaatttatgagtgtaccatagaagt 440  Q
    ||| ||||| ||||| ||||||||||||    
T  19268597 cctcaatttgtgagtataccatagaagt 19268570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 36049606 - 36049468
Alignment:
Q  303 gtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttag-aaaacagga 401  Q
    ||||||||| |||||||||||||||| | ||||||||   |||||||| || ||||||| || ||| ||||| ||||| ||||||||| | |||||| ||    
T  36049606 gtttttcttatgaaatgatattttctaaaatataaatattgacaaatacctttttatttcattaaagtgattattaatttataaattttgtaaaacaaga 36049507  T
Q  402 gtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||| |||||   || || ||| ||||||||||||||    
T  36049506 gtaccggtacactcaaaattgtgaatgtaccatagaagt 36049468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 283 - 390
Target Start/End: Complemental strand, 6438334 - 6438226
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| || ||| |||||||| |||||||||||||||| | ||||||||  | ||||||| || ||||||| |||||| | || ||||||     
T  6438334 ttataaacaatgaaatgatgtttttttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttcataaaaattatagttaatt 6438235  T
Q  382 tataaattt 390  Q
    |||||||||    
T  6438234 tataaattt 6438226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 44068279 - 44068415
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttag-aaaacaggag 402  Q
    |||||||| ||| ||||  |||||| | ||||||||   ||||| ||||| |||||||||||||| |||| |||||| ||||||||| | |||||| |||    
T  44068279 tttttcttatgatatgacgttttctaaaatataaatattgacaactaact-tttattttataaaaatgatcgttaatttataaattttgtaaaacaagag 44068377  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    || ||||||||   ||||| |||||||||| |||||||    
T  44068378 tatcgatacactaaaatttctgagtgtaccgtagaagt 44068415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Complemental strand, 5085002 - 5084843
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| |||||||||||||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  5085002 cttataaacaatgaaatgatg-gtttttcttatgaaatgatattttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 5084904  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| |||||||| |||||   || |||||||||||| ||||||||    
T  5084903 ttatatattttgtgaaacaagagtaccggtacactcaaaattatgagtgtacgatagaagt 5084843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 6657689 - 6657848
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| ||||||    
T  6657689 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaat 6657787  T
Q  381 gtataaatttagaa-aacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     ||||||||| |   |||| |||||||| |||||   || ||||| |||||||||||||||    
T  6657788 ttataaattttgtgcaacaagagtaccggtacactcaaaattatgggtgtaccatagaagt 6657848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 438
Target Start/End: Original strand, 22594977 - 22595136
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||||| || | | |||||||| |||||| ||||||||| | ||||||| | ||||||||| || ||| ||  |||||| |||| |||    
T  22594977 attcttataaacaatgaaatgatat-tttttcttatgaaataatattttctaaaatataaaagtcgacaaatagcttttttttacataaaaatgatcgtt 22595075  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaa 438  Q
    ||  |||  |||||  ||||||  |||||| |||||||||||||| | ||||||| |||||    
T  22595076 aacttattgatttatgaaacagatgtaccggtacaccttaatttaagggtgtaccgtagaa 22595136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 391
Target Start/End: Complemental strand, 6588376 - 6588289
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattta 391  Q
    ||||||||||||||||| ||||||| | |||||||   |||||||||| | ||||||| |||||| | ||||||||| |||| |||||    
T  6588376 tttttcttctgaaatgacattttctaaaatataaaactcgacaaataattctttatttcataaaaataattgttaatttatatattta 6588289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 391
Target Start/End: Complemental strand, 2283330 - 2283219
Alignment:
Q  279 attcttataaacaatg-aatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||| ||||  || |||||||| ||||||||| |||||| | ||||||||   |||||||| |||||||||| |||||| | || |||    
T  2283330 attcttataaacaatgaaatgacgt-tttttcttgtgaaatgatgttttctaaaatataaatattgacaaatagctatttatttcataaaa-taatcgtt 2283233  T
Q  378 aatgtataaattta 391  Q
    ||| ||||||||||    
T  2283232 aatttataaattta 2283219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 279 - 391
Target Start/End: Original strand, 4108547 - 4108659
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||| ||||||||||||| | |||| |||||||  ||| ||| | |||||||| ||||||||   |||||||||| ||||||||||||||| ||||  ||    
T  4108547 attcatataaacaatgaaattgtgtttttttctcatgagatggtgttttctgaaatataaataatgacaaataacaatttattttataaaa-tgatcatt 4108645  T
Q  378 aatgtataaattta 391  Q
    ||| ||||||||||    
T  4108646 aatttataaattta 4108659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 390
Target Start/End: Original strand, 1860171 - 1860279
Alignment:
Q  282 cttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||||  |   ||||||||| ||||||||| |||||| | ||||||||   || ||||| || ||||||| || ||| |||||||||||     
T  1860171 cttataaacaatgaaacgatggtttttcttatgaaatgatgttttctaaaatataaatattgataaatacctttttatttcattaaagtgattgttaatt 1860270  T
Q  382 tataaattt 390  Q
    |||||||||    
T  1860271 tataaattt 1860279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 440
Target Start/End: Complemental strand, 2317001 - 2316842
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  2317001 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 2316903  T
Q  381 gtataaattt-agaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| |||||||| |||||   || || ||||||||||||||||||    
T  2316902 ttatatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagt 2316842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 426
Target Start/End: Original strand, 5615624 - 5615771
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||||| || ||| |||||| | |||||| || |||||| | ||||||||     |||||| || |||||||||| |||| | | |||    
T  5615624 attcttataaacaatgaaatgatgtttttttcctatgaaattatgttttctaaaatataaatattatcaaatagctttttattttatgaaatgg-tagtt 5615722  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgag 426  Q
    ||| ||||||||||  ||  | |||||||||||||||| ||||||||||    
T  5615723 aatttataaatttaagaagtaagagtaccgatacacctcaatttatgag 5615771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 441
Target Start/End: Complemental strand, 8362567 - 8362404
Alignment:
Q  279 attcttataaacaatg-aatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||| |||| ||| |||||||| | ||||||| |||||| | ||||||||   ||  ||||| | ||||||| |||||| | || |||    
T  8362567 attcttataaacaatgaaatgatgtttttttcttataaaatgatgttttctaaaatataaatattgatgaataagtctttatttcataaaa-taatcgtt 8362469  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatga-gtgtaccatagaagtc 441  Q
    ||  |||||||||   ||| |||||||||  ||||||| ||||||||| ||||||| ||||||||    
T  8362468 aaattataaatttttgaaataggagtaccagtacacctcaatttatgaggtgtaccgtagaagtc 8362404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 440
Target Start/End: Complemental strand, 16815014 - 16814855
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| |||||||||||||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  16815014 cttataaacaatgaaatgatg-gtttttcttatgaaatgatattttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 16814916  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| |||||||| |||||   || || |||||||| |||||||||    
T  16814915 ttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtatcatagaagt 16814855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 440
Target Start/End: Complemental strand, 16854294 - 16854135
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| |||||||||||||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  16854294 cttataaacaatgaaatgatg-gtttttcttatgaaatgatattttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 16854196  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| |||||||| |||||   || || |||||||| |||||||||    
T  16854195 ttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtatcatagaagt 16854135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 286 - 386
Target Start/End: Original strand, 21425457 - 21425557
Alignment:
Q  286 taaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtata 385  Q
    ||||||||||||| ||| |||||||| ||| ||||  |||||| | ||||||||   ||||||||||| ||||||| | |||| |||| |||||| ||||    
T  21425457 taaacaatgaatgatgtttttttcttatgatatgacgttttctaaaatataaatattgacaaataactttttatttcacaaaaatgatcgttaatttata 21425556  T
Q  386 a 386  Q
    |    
T  21425557 a 21425557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 40533495 - 40533654
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  40533495 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 40533593  T
Q  381 gtataaattt-agaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| |||||||| |||||   || || ||||||||||||||||||    
T  40533594 ttatatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagt 40533654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 391
Target Start/End: Complemental strand, 2307416 - 2307330
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattta 391  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||| ||||||||||||| ||||| | || |||||| ||||||||||    
T  2307416 tttttcttgtgaaatgatgttttctaaaatataaatattgacaaacaactatttattttttaaaa-taatcgttaatttataaattta 2307330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 18576466 - 18576304
Alignment:
Q  279 attcttataaacaatg-aatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||| |||| || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  ||    
T  18576466 attcttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcttt 18576368  T
Q  378 aatgtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||| |||| |||| |  ||||| |||||||| |||||   || || ||||||||||||| ||||    
T  18576367 aatttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccataaaagt 18576304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 347 - 440
Target Start/End: Original strand, 12002654 - 12002747
Alignment:
Q  347 aataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatga-gtgtaccatagaagt 440  Q
    ||||||| ||||||| ||||||| ||| |||||  |||||||||  |||| || ||||||||||||||| ||||| ||| ||||||| |||||||    
T  12002654 aataactctttatttcataaaat-gatcgttaaattataaatttttaaaatagaagtaccgatacacctcaatttgtgaggtgtaccgtagaagt 12002747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 304 - 390
Target Start/End: Original strand, 12547633 - 12547719
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt 390  Q
    |||||||| |||||||||||||||| | ||||||||  | | ||||| || ||||||| |||||| | || |||||| |||||||||    
T  12547633 tttttcttatgaaatgatattttctaaaatataaatatcaataaatagctttttatttcataaaaataatagttaatttataaattt 12547719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 28394334 - 28394471
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  ||||| |||| |||| |  ||||| |||    
T  28394334 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcattaatttatatattttgtgaaacaagag 28394433  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| |||||   || || ||||||||||||||||||    
T  28394434 taccggtacactcaaaattgtgagtgtaccatagaagt 28394471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 35292777 - 35292914
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt-agaaaacaggag 402  Q
    ||||| || ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  ||||| |||| |||| |  ||||| |||    
T  35292777 ttttttttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatatttaatttatatattttatgaaacaagag 35292876  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| ||||| | || || ||||||||||||||||||    
T  35292877 taccggtacacttaaaattgtgagtgtaccatagaagt 35292914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 2e-67; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 181 - 440
Target Start/End: Original strand, 32455440 - 32455696
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatta 279  Q
    |||||||||| ||||  ||||||||||||| ||| |||| ||| ||||||||||||||||||||||||| ||||||||||          || ||||| |    
T  32455440 caccaaaagcatcaacaaattaaaattgaaattttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaaa--ctcattatga 32455537  T
Q  280 ttcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaa 379  Q
    |||  |||||||||||||  | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  32455538 ttcaaataaacaatgaataatatgtttttcttatgaaatgatattttctgagatataaatgccgacaaataactatttatttcataaaattgattattaa 32455637  T
Q  380 tgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||||||||||| || |  |||||||||||||||||||||||||||||||||||||||||    
T  32455638 tgtataaatttaggaagc--gagtaccgatacaccttaatttatgagtgtaccatagaagt 32455696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 185 - 432
Target Start/End: Complemental strand, 40585119 - 40584875
Alignment:
Q  185 aaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattct 283  Q
    |||||| |||||||| |||||||||| ||| |||||||| |||||| |||||||||||||||||| |||||||| |           ||| ||| |||||    
T  40585119 aaaagcgtcaatgaaataaaattgaatttttatcgttcataatagacaactttgattattttatacgataatattttaaaaat----ttactatgattct 40585024  T
Q  284 tataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgta 383  Q
    || ||| |||||||| |||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||| | ||||||||||| || ||| ||    
T  40585023 tacaaaaaatgaatgatgtgtttttcttatgaaatgatattttctaaaatataaatgccgacaaataactatttatctcataaaattgatcgtcaattta 40584924  T
Q  384 taaatttagaaaacaggagtaccgatacaccttaatttatgagtgtacc 432  Q
    ||||||||||||| | ||||| || |||||  ||||||| |||||||||    
T  40584923 taaatttagaaaataagagtatcggtacactataatttacgagtgtacc 40584875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 212 - 440
Target Start/End: Original strand, 36156019 - 36156243
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||| ||||||           ||| ||| |||||||||||||||||||| ||  ||||||||    
T  36156019 tttatcgctcataatagagaactttgattattttatacgatgatatgtaaaaaaa----ttactatgattcttataaacaatgaatgatgcatttttctt 36156114  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |||| | |||| ||||| ||| || |||||||| |||    
T  36156115 ctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcataaaattgatcgttagtttatagatttataaagcaagagtaccggtac 36156214  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| ||||||||  |||||||    
T  36156215 acctcaatttacgagtgtactgtagaagt 36156243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 212 - 440
Target Start/End: Original strand, 17069163 - 17069387
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||| |||||||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| || |||||||||    
T  17069163 tttatcgctcataataaagaactttgattattttatacgataatatgtaaaaaaa----ttactatgattcttataaacaatgaatgatgcgtttttctt 17069258  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||| ||| |||||||||   |||||||||||||||||||||||||||||| ||||||||||| |||| | |||| |||||  || ||||||||||| |||    
T  17069259 ctggaatcatattttctataatataaatgccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaggagtaccggtac 17069358  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| ||||| ||| |||||||    
T  17069359 acctcaatttacgagtgcaccgtagaagt 17069387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 212 - 422
Target Start/End: Complemental strand, 2271012 - 2270806
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||           ||| ||| ||||||||||||| |||||| || |||||||||    
T  2271012 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaa----ttactatgattcttataaacagtgaatgatgcgtttttctt 2270917  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | |||||||||||||||||||| ||||||||| ||||||||||| |||||| |||| |||||  || || |||||||| |||    
T  2270916 ctgaaatcatattttctaaaatataaatgccgacaaataattatttatttcataaaattgatcgttaatttatagatttatgaagcaagagtaccggtac 2270817  T
Q  412 accttaattta 422  Q
    |||| ||||||    
T  2270816 acctcaattta 2270806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 212 - 422
Target Start/End: Complemental strand, 10400928 - 10400723
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||||| |||||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| || |||||||||    
T  10400928 tttatcgctcataatagataactttgattattttatacgataatatgtaaaaaa-----ttactatgattcttataaacaatgaatgatgcgtttttctt 10400834  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |||| | |||| |||||  || || |||||| |||||    
T  10400833 ctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtactgatac 10400734  T
Q  412 accttaattta 422  Q
    |||| ||||||    
T  10400733 acctcaattta 10400723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 6e-40
Query Start/End: Original strand, 181 - 390
Target Start/End: Complemental strand, 39041566 - 39041360
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaactt-tatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatta 279  Q
    |||||||||| |||| ||| |||||||||| || ||||| | | |||| |||||||||||||||||||| ||||||||||           ||| ||||     
T  39041566 caccaaaagcgtcaacgaaataaaattgaatttctatcgcttataataaagaactttgattattttatacgataatatgtaaaaaaa----ttactattg 39041471  T
Q  280 ttcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaa 379  Q
    ||||||| ||||||||||| |||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||  ||||    
T  39041470 ttcttatgaacaatgaatgatgtgtttttcttgtgaaatgatattttctaaaatataaatgccgacaaataactatttatttcataaaattgatcattaa 39041371  T
Q  380 tgtataaattt 390  Q
    | |||||||||    
T  39041370 tttataaattt 39041360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 281 - 430
Target Start/End: Complemental strand, 13645683 - 13645534
Alignment:
Q  281 tcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  13645683 tcttataaacaatgaatgatgtgtttttcttatgaaatgatgttttctaagatataaatgccgacaaataactatttatttcataaaattgatcgttaat 13645584  T
Q  381 gtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgta 430  Q
     |||| |||||| ||  | ||||| || ||||||  |||||| |||||||    
T  13645583 ttatagatttaggaagtaagagtaacggtacaccacaatttacgagtgta 13645534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 212 - 431
Target Start/End: Complemental strand, 24432028 - 24431813
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||||||||| |||||||||||||| ||||||||||           ||| ||| ||||||||||||| |||||| ||||||||||||    
T  24432028 tttatcgctcataatagagaacattgattattttatacgataatatgtaataaaa----ttactatgattcttataaacagtgaatgatgtgtttttctt 24431933  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | ||| ||||| |||||||||||||||||||| ||||||||||| |||| | ||||||||||  || || || || ||||||    
T  24431932 ctgaaatcatattttctaaaatagaaatgtcgacaaataactatttatttcataaaattgatcgttagtttataaatttatgaagcaagaatatcgatac 24431833  T
Q  412 accttaatttatgagtgtac 431  Q
    |||| |||||| ||||||||    
T  24431832 acctcaatttacgagtgtac 24431813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 323 - 444
Target Start/End: Complemental strand, 38354852 - 38354732
Alignment:
Q  323 ttttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaattta 422  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||| | |||||||||||| ||||||||||||||||||||||||||||||    
T  38354852 ttttctgagatataagtgccgacaaataactatttatttcataaaattgactgt-agtgtataaatttaaaaaacaggagtaccgatacaccttaattta 38354754  T
Q  423 tgagtgtaccatagaagtcatc 444  Q
    |||||||||   ||||||||||    
T  38354753 tgagtgtacaccagaagtcatc 38354732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 192 - 391
Target Start/End: Complemental strand, 43059734 - 43059538
Alignment:
Q  192 tcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaac 290  Q
    ||||| || |||||||||| ||| |||| ||| |||||||||||||||||||||||||| |||||||||            || ||| | ||||| ||||    
T  43059734 tcaattaaataaaattgaatttttatcgctcataatagagaactttgattattttatatcataatatgttaaaattc----tactatgactcttacaaac 43059639  T
Q  291 aatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt 390  Q
    |||||||  |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||  ||||| |||||||||    
T  43059638 aatgaattatgtgtttttcttatgaaatgatattttctaagatataaatgccgacaaataactaattatttcataaaattgatcattaatttataaattt 43059539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 181 - 413
Target Start/End: Complemental strand, 10568741 - 10568512
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaactttatcg--ttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatt 278  Q
    |||||||||| |||||||| |||||||||| ||| | |  ||   |||||||||||||||||||||||||||||||||||            ||| |||     
T  10568741 caccaaaagcgtcaatgaaataaaattgaatttttttgaatttttaatagagaactttgattattttatatgataatatggcaaaaat----ttactatg 10568646  T
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtta 378  Q
    |||| |||||||||| |||  |||||||||||| ||||||| |||||| | | |||||||||||| ||||||||||||||||| |||||||| ||  |||    
T  10568645 attcgtataaacaataaataatgtgtttttcttatgaaatg-tattttttaaaatataaatgccggcaaataactatttatttcataaaattaatcatta 10568547  T
Q  379 atgtataaatttagaaaacaggagtaccgatacac 413  Q
    || |||| |||||| || ||  ||||| |||||||    
T  10568546 atttatagatttaggaagcaaaagtactgatacac 10568512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 321 - 440
Target Start/End: Complemental strand, 1445849 - 1445730
Alignment:
Q  321 tattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatt 420  Q
    |||||||| | |||||||||||||||||||||||||||||| ||||||||||| |||| | ||||||||||  ||  | || |||||||||| || ||||    
T  1445849 tattttctaaaatataaatgccgacaaataactatttatttcataaaattgatcgttagtttataaatttatgaagtaagaataccgatacatctcaatt 1445750  T
Q  421 tatgagtgtaccatagaagt 440  Q
    || || |||||| |||||||    
T  1445749 tacgaatgtaccgtagaagt 1445730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 13091179 - 13091315
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||||||||||| | ||||||||  | ||||||| || ||||||| |||||| |||| |||||| |||||||||   ||  | ||||    
T  13091179 tttttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttcataaaaatgatagttaatttataaatttttgaagtaagagt 13091278  T
Q  404 accgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||||||||||| | ||||||| |||||||    
T  13091279 accggtacaccttaatttacgggtgtaccgtagaagt 13091315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 10688637 - 10688796
Alignment:
Q  282 cttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||||  |   ||||||||| ||||||||| |||||| | ||||||||   |||||||| || |||||||||| ||| || | ||||||     
T  10688637 cttataaacaatgaaatgatagtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttattttattaaagtggtcgttaatt 10688736  T
Q  382 tataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||| | |||||| |||||||||||||  | || ||||||||||| |||||||||    
T  10688737 tatatattttgtaaaacaagagtaccgatacatttaaaattatgagtgtatcatagaagt 10688796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 283 - 440
Target Start/End: Original strand, 9589452 - 9589610
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| || ||  |||||||  |||||||||||||||| |  |||||||  | ||||||| || ||||||| |||||| |||| ||||||     
T  9589452 ttataaacaatgaaatgatgcttttttctcatgaaatgatattttctaaagtataaatatcaacaaatagctttttatttcataaaaatgatagttaatt 9589551  T
Q  382 tataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||||   ||  | |||||||||||||||||||||| ||  |||||| |||||||    
T  9589552 tataaatttttgaagtaagagtaccgatacaccttaatttgtggatgtaccgtagaagt 9589610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 304 - 421
Target Start/End: Original strand, 14967497 - 14967614
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||||||||||| | ||||| ||  | ||||||| || ||||||| |||||| |||| |||||| |||||||||   ||  | ||||    
T  14967497 tttttcttatgaaatgatattttctaaaatatagatatcaacaaatagctttttatttcataaaaatgatagttaatttataaatttttgaagtaagagt 14967596  T
Q  404 accgatacaccttaattt 421  Q
    ||||||||||||||||||    
T  14967597 accgatacaccttaattt 14967614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 432
Target Start/End: Original strand, 29744168 - 29744296
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||||||||||| | ||||||||  | | ||||| || ||||||| |||||| |||| |||||| |||||||||   || ||  |||    
T  29744168 tttttcttatgaaatgatattttctaaaatataaatatcaataaatagctctttatttcataaaaatgatagttaatttataaatttttgaagcaaaagt 29744267  T
Q  404 accgatacaccttaatttatgagtgtacc 432  Q
    |||| ||||| ||||||| ||||||||||    
T  29744268 accggtacactttaatttgtgagtgtacc 29744296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 440
Target Start/End: Complemental strand, 37963157 - 37962998
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||| ||||| || ||| ||||  |||||| | ||||||||   ||||||||| | |||||||||||||| |||| ||||||    
T  37963157 cttataaacaatgaaatgatgttttttt-ttatgatatgacgttttctaaaatataaatattgacaaataaatttttattttataaaaatgatcgttaat 37963059  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     ||||||||| |  ||||| |||||||| |||||   ||||| ||||||||||||||||||    
T  37963058 ttataaattttgtgaaacaagagtaccggtacactacaatttctgagtgtaccatagaagt 37962998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 19126157 - 19126315
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||    ||||||| || ||||||| || ||| |||| ||||||    
T  19126157 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattaacaaatatctttttatttcattaaagtgatcgttaat 19126255  T
Q  381 gtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |  || ||||  ||||| |||||||| ||||| | || |||||||||||||||||||||    
T  19126256 tttaaattttatgaaacaagagtaccgttacacttaaaattatgagtgtaccatagaagt 19126315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 38354931 - 38354847
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttct 310  Q
    ||||||||||||||||||||||||| ||||||||||          |||||||| |||||||||||||||||||| |||||||||||    
T  38354931 aatagagaactttgattattttatacgataatatgt--aaaaaaaacttattatgattcttataaacaatgaatgatgtgtttttct 38354847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 40563281 - 40563119
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttata-aaattgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| ||||||||| || | | | |||||||||  ||||||||| ||||||||| | | ||| |||| ||    
T  40563281 attcttataaacaatgaaatgatgt-tttttcttatgaaatgatgttctataaaatataaatgttgacaaataattatttatttcacacaaaatgatcgt 40563183  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  || || ||||| || ||||||| | |||||||||||||| |||||||    
T  40563182 taatttataaaattatgaagcaagagtatcggtacacctcattttatgagtgtaccgtagaagt 40563119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 13119040 - 13119201
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||||| || ||| |||||||| |||||| || || | | | ||||||||   || ||||| ||||||||| ||||||| |||| |||    
T  13119040 attcttataaacaatgaaatgatgt-tttttcttatgaaataatgttctataaaatataaatattgaaaaatagctatttattatataaaaatgatcgtt 13119138  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||| |||||| |||  || ||||||||||| ||||||| | ||| | |||||||| |||||||    
T  13119139 aatttataaaattatgaagcaggagtaccggtacacctcactttgtaagtgtaccgtagaagt 13119201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 39816670 - 39816509
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||||| || | | |||||||| |||||||||||| | | | |||||||||  || |||||  ||||||||| | |||| |||| |||    
T  39816670 attcttataaacaatgaaatgatat-tttttcttatgaaatgatattctataaaatataaatgttgataaatagttatttatttaacaaaaatgatcgtt 39816572  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||| |||||| |||  || || |||||||| ||||||| | ||| |||||||||| |||||||    
T  39816571 aatttataaaattatgaagcaagagtaccggtacacctcactttgtgagtgtaccgtagaagt 39816509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 438
Target Start/End: Original strand, 41802373 - 41802507
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| | ||||| |||||||| | ||| ||||  | ||||||| || ||||||| |||||| |||| |||||| |||||||||  |||| | ||||    
T  41802373 tttttcttattaaatgttattttctaaaatacaaatatcaacaaatagctctttatttcataaaaatgatagttaatttataaatttttaaaataagagt 41802472  T
Q  404 accgatacaccttaatttatgagtgtaccatagaa 438  Q
    |||  ||||||||||||||||  |||||| |||||    
T  41802473 accagtacaccttaatttatggatgtaccgtagaa 41802507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 31588501 - 31588637
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||||||||||| | ||||||||   ||||||||  | ||||||| |||||| ||||  ||||| ||||||||||  |||||  |||    
T  31588501 tttttcttatgaaatgatattttctaaaatataaatattgacaaatagttttttatttcataaaa-tgatcattaatttataaatttatgaaacaaaagt 31588599  T
Q  404 accgatacaccttaatttatga-gtgtaccatagaagt 440  Q
    |||| ||||||| ||||| ||| ||||||| |||||||    
T  31588600 accggtacacctcaatttgtgaggtgtaccgtagaagt 31588637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 380
Target Start/End: Complemental strand, 23258755 - 23258593
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgt--gtttttc 309  Q
    ||||||| ||| |||||||||||||||||||||| || ||||||||||          |||| ||| ||||||||||||||| || | |||   ||||||    
T  23258755 tttatcgctcataatagagaactttgattattttttacgataatatgt--------aacttactatgattcttataaacaataaaagatgttcttttttc 23258664  T
Q  310 ttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    || |||||||| |||||   | ||||||||| ||| |||||| | ||||||| ||||||||||| ||||||    
T  23258663 ttatgaaatgaaatttttcaaaatataaatgtcgataaataattctttatttaataaaattgatcgttaat 23258593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 25684307 - 25684466
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  25684307 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 25684405  T
Q  381 gtataaatttaga-aaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| |||||||| |||||   || |||||||||||||||||||||    
T  25684406 ttatatattttgtgaaacaagagtaccggtacactcaaaattatgagtgtaccatagaagt 25684466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 304 - 390
Target Start/End: Complemental strand, 13589005 - 13588919
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt 390  Q
    |||||||| |||||||||||||||| | ||||||||   |||||||| || ||||||| || ||| |||| |||||| |||||||||    
T  13589005 tttttcttatgaaatgatattttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaatttataaattt 13588919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 304 - 438
Target Start/End: Complemental strand, 21051461 - 21051327
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||| ||||||| ||||||||||  | ||||||| || ||||||  |||||| | || |||||| || | ||||  |||| || |||    
T  21051461 tttttcttatgaaatgacattttctaagatataaatatcaacaaatagctctttattccataaaaataatagttaatttaaagatttttaaaatagaagt 21051362  T
Q  404 accgatacaccttaatttatgagtgtaccatagaa 438  Q
    | || |||||||||||||| | ||||||| |||||    
T  21051361 atcggtacaccttaatttacgggtgtaccgtagaa 21051327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 22780778 - 22780915
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttatttta-taaaattgattgttaatgtataaatttagaaaacaggag 402  Q
    |||||||| |||||||||||||||| |  |||||||| | ||||| |||||||| ||| |  |||| |||| |||||| |||||||||   ||||| |||    
T  22780778 tttttcttatgaaatgatattttctaaactataaatgtcaacaaacaactatttttttcacaaaaaatgatagttaatttataaattttttaaacaagag 22780877  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    | ||| |||| ||||||||   |||||||| |||||||    
T  22780878 tgccggtacatcttaatttgcaagtgtaccgtagaagt 22780915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 28770087 - 28769950
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| |||||| ||||||||| |  ||||| |||    
T  28770087 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaatttataaattttgtgaaacaagag 28769988  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| || ||   || || ||||||||||||||||||    
T  28769987 taccggtatactcaaaattgtgagtgtaccatagaagt 28769950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 440
Target Start/End: Complemental strand, 8068482 - 8068323
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  8068482 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 8068384  T
Q  381 gtataaattt-agaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| |||||||| |||||   || || ||||||||||||||||||    
T  8068383 ttatatattttatgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagt 8068323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 29996736 - 29996898
Alignment:
Q  279 attcttataaacaatg-aatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaata-actatttattttataaaattgattgt 376  Q
    |||||||||||||||| |||| ||| ||||||||  |||||||| |||||| | ||||||||   ||||||||   | ||||||| |||||| |||| ||    
T  29996736 attcttataaacaatgaaatgatgt-tttttcttacgaaatgatgttttctaaaatataaatatggacaaatattttttttatttcataaaa-tgatcgt 29996833  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatga-gtgtaccatagaagt 440  Q
    |||| |||||||||| | | || |||||||| || |||||||||| ||| ||||||| |||||||    
T  29996834 taatttataaatttatagagcaagagtaccggtaaaccttaatttgtgatgtgtaccgtagaagt 29996898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 32624420 - 32624579
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||| ||||| || ||| ||||  |||||| | ||||||||   ||||||||||| |||||||||||||| |||| ||||||    
T  32624420 cttataaacaatgaaatgatgttttttt-ttatgatatgacgttttctaaaatataaatattgacaaataactttttattttataaaaatgatcgttaat 32624518  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     ||||| ||| |  ||||| |||||||| |||||   ||||| ||||| |||| |||||||    
T  32624519 ttataagttttgtgaaacaagagtaccggtacactaaaatttctgagtataccgtagaagt 32624579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 303 - 395
Target Start/End: Complemental strand, 34859576 - 34859484
Alignment:
Q  303 gtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaa 395  Q
    ||||||||| ||||||||| |||||| | ||||||||   || ||||| || ||||||| || ||| ||||||||||| ||||||||| ||||    
T  34859576 gtttttcttatgaaatgatgttttctaaaatataaatattgataaatacctttttatttcattaaagtgattgttaatttataaattttgaaa 34859484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 271 - 440
Target Start/End: Original strand, 2851930 - 2852100
Alignment:
Q  271 ttattattattcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat 369  Q
    ||||||| ||||||||||||||| || || ||| |||||||| ||||||| | |||| | | ||||||||   |||||||| ||||||| |  ||||||     
T  2851930 ttattatgattcttataaacaattaaatgatgt-tttttcttatgaaatgttgttttataaaatataaatattgacaaatagctatttaatacataaaaa 2852028  T
Q  370 -tgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| ||| || |||||| |||  || || |||||||||||||||| | ||| |||||||||| |||||||    
T  2852029 atgatcgttcatttataaaattaagaagcatgagtaccgatacacctcattttgtgagtgtaccgtagaagt 2852100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 4839577 - 4839522
Alignment:
Q  313 tgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaa 368  Q
    |||||||||||||||| | |||||||   |||||||||||| ||||||||||||||    
T  4839577 tgaaatgatattttctaaaatataaaaatcgacaaataactctttattttataaaa 4839522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 271 - 440
Target Start/End: Complemental strand, 14434992 - 14434822
Alignment:
Q  271 ttattattattcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttata-aaa 368  Q
    ||||||| ||||||||||||||| || || ||| |||||||| ||||||| | || | | | ||||||||   |||||||| ||||||| |  ||| |||    
T  14434992 ttattatgattcttataaacaattaaatgatgt-tttttcttatgaaatgttgttctataaaatataaatattgacaaatagctatttactacatataaa 14434894  T
Q  369 ttgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| ||| || |||||| |||  |||||||||||||||||||||| | ||| |||||||||  |||||||    
T  14434893 atgatcgttcatttataaaattaagaaacaggagtaccgatacacctcattttgtgagtgtacagtagaagt 14434822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 33678517 - 33678560
Alignment:
Q  397 caggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||||||||||||||||| | ||| ||||||||||||||||||    
T  33678517 caggagtaccgatacacctcattttgtgagtgtaccatagaagt 33678560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 282 - 438
Target Start/End: Complemental strand, 31236751 - 31236594
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  31236751 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 31236653  T
Q  381 gtataaatttaga-aaacaggagtaccgatacaccttaatttatgagtgtaccatagaa 438  Q
     |||| |||| |  ||||| |||||||| |||||   || || ||||||||||||||||    
T  31236652 ttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaa 31236594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 304 - 441
Target Start/End: Complemental strand, 32063666 - 32063528
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| | |||| |||| |||| |  ||||| |||    
T  32063666 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcggtaatttatatattttgtgaaacaagag 32063567  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagtc 441  Q
    ||||| |||||   || || |||||||||||||||||||    
T  32063566 taccggtacactcaaaattgtgagtgtaccatagaagtc 32063528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 400 - 441
Target Start/End: Original strand, 3056758 - 3056799
Alignment:
Q  400 gagtaccgatacaccttaatttatgagtgtaccatagaagtc 441  Q
    |||||||| |||||| ||||||| ||||||||||||||||||    
T  3056758 gagtaccggtacaccgtaatttacgagtgtaccatagaagtc 3056799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 128; Significance: 1e-65; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 50029981 - 50029755
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||           ||||||| ||||||||||| ||||| || ||||||||||||    
T  50029981 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaat---ttattatgattcttataaataatgagtgatgtgtttttctt 50029885  T
Q  312 ctgaaatgatatttt-ctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgata 410  Q
     |||||||||||||| ||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  50029884 atgaaatgatatttttctgagatataaatgcggaaaaataactatttatttcataaaattgattgttaatgtataaatttaggaagcaggagtaccgata 50029785  T
Q  411 caccttaatttatgagtgtaccatagaagt 440  Q
    ||||||| ||||||||||||||||||||||    
T  50029784 caccttagtttatgagtgtaccatagaagt 50029755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 45635911 - 45635685
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| ||||||| ||||    
T  45635911 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaaaa--ttactatgattcttataaacaatgaatgatgtgtttatctt 45635814  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
     ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||  |||||| |||    
T  45635813 atgaaatgatattttctgagatataaatgctgacaaataactatttatttcatagaattgattgttaatgtataaatttagaaagcagaggtaccggtac 45635714  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    || |||||||||||||||||| |||||||    
T  45635713 actttaatttatgagtgtaccgtagaagt 45635685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 284 - 440
Target Start/End: Original strand, 8966177 - 8966333
Alignment:
Q  284 tataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgta 383  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||| |    
T  8966177 tataaacaatgaatgatgtgtttttcttatgaaatgatattttctgagatacaaatgccgacaaataactttttatttcataaaattgattgttaatgca 8966276  T
Q  384 taaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||||||| || ||||||||||| |||||||||||||||||||||||| |||||||    
T  8966277 taaatttaggaagcaggagtaccggtacaccttaatttatgagtgtaccgtagaagt 8966333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 224 - 440
Target Start/End: Complemental strand, 52024654 - 52024442
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    ||||||||||||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| ||| ||||||||||||||| ||||    
T  52024654 aatagagaactttgattattttatacgataatatgttaaaaaa----ttactatgattcttataaacaatgaatgatgtatttttcttctgaaatcatat 52024559  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||||| | |||||||||||||||||||||||||||||| ||||||||||| |||| | |||| |||||  ||||| |||||||  ||||||| ||||||     
T  52024558 tttctaaaatataaatgccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaaacaagagtacctgtacacctcaatttac 52024459  T
Q  424 gagtgtaccatagaagt 440  Q
    ||||||||  |||||||    
T  52024458 gagtgtacagtagaagt 52024442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 224 - 440
Target Start/End: Original strand, 29806199 - 29806411
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    |||||||||||||||||||||||||||||||||||            ||| ||| |||| ||||||||||||||| |||||||||||| |||||||||||    
T  29806199 aatagagaactttgattattttatatgataatatgacaaaaat----ttactatgattcgtataaacaatgaatgatgtgtttttcttatgaaatgatat 29806294  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||||| | |||||||||| | ||||||| ||||||||| |||||||| ||||||||| |||| |||||| || || |||||||| ||||||| |||||      
T  29806295 tttctaaaatataaatgctggcaaataattatttatttcataaaattaattgttaatttatagatttaggaagcaagagtaccggtacacctcaatttgc 29806394  T
Q  424 gagtgtaccatagaagt 440  Q
    ||||||||| |||||||    
T  29806395 gagtgtaccgtagaagt 29806411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 212 - 427
Target Start/End: Original strand, 19914212 - 19914423
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||||| |||||||||||||||||  ||||||||||           ||| ||| |||||||||||||||||||| ||  ||||||||    
T  19914212 tttatcgctcataatagataactttgattattttatccgataatatgtaaaaaaa----ttactatgattcttataaacaatgaatgatgcatttttctt 19914307  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||  || || |||||||| |||    
T  19914308 ctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcataaaattgatcgttaatttatagatttatgaagcaagagtaccggtac 19914407  T
Q  412 accttaatttatgagt 427  Q
    ||||||||||| ||||    
T  19914408 accttaatttacgagt 19914423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 212 - 429
Target Start/End: Original strand, 23795955 - 23796168
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||           ||| ||| ||| |||||||||||||||| ||| ||||||||    
T  23795955 tttatcgctcataatagagaactttgattattttatatgataatatgttaaaaat----ttactatgatttttataaacaatgaatgttgtatttttctt 23796050  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
     ||| |||||||||||| | |||||||||||||||||||| ||||||||| ||||||||||| |||||| |||| |||||| ||  | |||||||| |||    
T  23796051 atgacatgatattttctaaaatataaatgccgacaaataattatttatttcataaaattgatcgttaatttatagatttaggaagtaagagtaccggtac 23796150  T
Q  412 accttaatttatgagtgt 429  Q
    |||  ||||||| |||||    
T  23796151 accagaatttataagtgt 23796168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 35749149 - 35748926
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||||||||||||||||| |||||| ||||||||||           ||| ||| |||||||||||||||||||| || |||||||||    
T  35749149 tttatcgctcataatagagaactttgattactttatacgataatatgtaaaaaa-----ttactatgattcttataaacaatgaatgatgcgtttttctt 35749055  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    | ||||| ||||||| | | |||||||||||||||||||||||||||||| |||||||||||  ||||| |||| |||||  || || ||||||||||||    
T  35749054 cggaaatcatattttttaaaatataaatgccgacaaataactatttatttgataaaattgatcattaatttatagatttatgaagcaagagtaccgatac 35748955  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    ||||  ||||| ||||||| | |||||||    
T  35748954 acctctatttacgagtgtatcgtagaagt 35748926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 212 - 440
Target Start/End: Original strand, 9252030 - 9252255
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| || |||||||||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| ||  ||||||||    
T  9252030 tttatcgctcataaaagagaactttgattattttatacgataatatgtaaaaaaaaaaattactatgattcttataaacaatgaatgatgcatttttctt 9252129  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | ||||   ||||||||||||||||||||||| ||||||||||| |||||| |||| || ||  || || |||||||| |||    
T  9252130 ctgaaatcatattttctaaaatat---tgccgacaaataactatttatttcataaaattgatcgttaatttatagatatatgaagcaagagtaccggtac 9252226  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| ||||||||| |||||||    
T  9252227 acctcaatttacgagtgtaccgtagaagt 9252255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 192 - 414
Target Start/End: Original strand, 8433584 - 8433802
Alignment:
Q  192 tcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaac 290  Q
    |||| ||| |||||||||| ||| |||| ||| ||||||||||||| ||||||||||| ||||| ||||           ||| ||| ||||||||||||    
T  8433584 tcaacgaaataaaattgaatttttatcgctcataatagagaacttttattattttatacgataacatgtaaaaaaa----ttactatgattcttataaac 8433679  T
Q  291 aatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt 390  Q
    |||||||| ||||||||| || ||| |||| ||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||    
T  8433680 aatgaatgatgtgtttttattatgacatga-attttctaaaatataaatgccgacaaataactatttatttcataaaattaattgttaatttataaattt 8433778  T
Q  391 agaaaacaggagtaccgatacacc 414  Q
    |  || || |||||||| ||||||    
T  8433779 aagaagcaagagtaccggtacacc 8433802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 279 - 441
Target Start/End: Original strand, 52162623 - 52162786
Alignment:
Q  279 attcttataaa-caatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    ||||||||||| |||||||||   |||||||||| |||||| ||||||||| | ||||||||||||| |||||||||||| ||||||||||||||| |||    
T  52162623 attcttataaaacaatgaatgacttgtttttcttatgaaattatattttctaaaatataaatgccgataaataactatttgttttataaaattgatcgtt 52162722  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagtc 441  Q
    ||| |||| |||||| ||||| |||||||| |||||   |||||| ||||||| | ||||||||    
T  52162723 aatttatagatttaggaaacaagagtaccggtacactgcaatttacgagtgtatcgtagaagtc 52162786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 181 - 439
Target Start/End: Original strand, 5528840 - 5529095
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatta 279  Q
    |||||||||| |||| ||| |||||||||| ||| || | ||| ||||||||||||||||||||| ||| ||||||||||           ||| ||| |    
T  5528840 caccaaaagcgtcaacgaaataaaattgaatttttattgctcataatagagaactttgattatttcatacgataatatgtaaaaaat----ttactatga 5528935  T
Q  280 ttcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaa 379  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||| | | ||||||||  |||||||||||||| ||||| |||||||||||  ||||    
T  5528936 ttcttataaacaatgaatgatgtgtttttattatgaaatgatattttataaaatataaatagcgacaaataactatctatttcataaaattgatcattaa 5529035  T
Q  380 tgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaag 439  Q
    | |||| |||| | |   | |||||||| ||||||| | |||| ||||||||| ||||||    
T  5529036 tttatagatttgggatggaagagtaccggtacacctcattttaagagtgtaccgtagaag 5529095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 192 - 422
Target Start/End: Complemental strand, 54262793 - 54262566
Alignment:
Q  192 tcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaac 290  Q
    |||| ||| |||||||||| ||| |||||||| ||||||||||||| ||||||||||  ||||| ||||           ||| ||| ||||||||||||    
T  54262793 tcaacgaaataaaattgaatttttatcgttcataatagagaacttttattattttatgcgataacatgtaaaaaaa----ttactatgattcttataaac 54262698  T
Q  291 aatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt 390  Q
    |||||||| ||||||||| || | | |||||||||||| | || |||||||| |||||||||||||||||| |||||||||||||||||| |||| ||||    
T  54262697 aatgaatgatgtgtttttattataacatgatattttctaaaatctaaatgccaacaaataactatttatttcataaaattgattgttaatttatagattt 54262598  T
Q  391 agaaaacaggagtaccgatacaccttaattta 422  Q
    |  || || ||||| || |||||| |||||||    
T  54262597 aagaagcaagagtatcggtacaccataattta 54262566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 303 - 440
Target Start/End: Original strand, 45927485 - 45927623
Alignment:
Q  303 gtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaa-tttagaaaacagga 401  Q
    ||||||||| |||||||||||||| | | ||||||||   |||||||| || ||||||| || ||| |||| |||||| |||||| |||| |||||| ||    
T  45927485 gtttttcttatgaaatgatattttttaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaatttataaattttataaaacaaga 45927584  T
Q  402 gtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||||||||||   || |||||||||||||||||||||    
T  45927585 gtaccgatacactcaaaattatgagtgtaccatagaagt 45927623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 303 - 440
Target Start/End: Complemental strand, 35320502 - 35320364
Alignment:
Q  303 gtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttag-aaaacagga 401  Q
    ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||||||||| ||||||||| | |||||| ||    
T  35320502 gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgattgttaatttataaattttgtaaaacaaga 35320403  T
Q  402 gtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||| |||||   || || ||||||||||||||||||    
T  35320402 gtaccggtacactcaaaattgtgagtgtaccatagaagt 35320364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 224 - 431
Target Start/End: Complemental strand, 45602249 - 45602037
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgttt---------ttcttctg 314  Q
    ||||||||||||||||||||||||||||||||||||           |||  || |||| ||||||||||||||| |||||||         || || ||    
T  45602249 aatagagaactttgattattttatatgataatatgtcaaaaat----ttaccatgattcgtataaacaatgaatgatgtgtttttatttttatttttatg 45602154  T
Q  315 aaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacacc 414  Q
    |||||||| ||||| | |||||||||| | ||||||||||||||||| |||||||| || |||||| |||| |||||  || || || ||||||||||||    
T  45602153 aaatgatactttctaaaatataaatgctggcaaataactatttatttcataaaattaatcgttaatttatagatttaagaagcaagaataccgatacacc 45602054  T
Q  415 ttaatttatgagtgtac 431  Q
    | |||||  ||||||||    
T  45602053 tcaatttgcgagtgtac 45602037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 1129295 - 1129133
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| ||||||||| |||| | | ||||||||   |||||||| |||||||||  ||||||  |||| ||    
T  1129295 attcttataaacaatgaaatgatgt-tttttcttatgaaatgatgttttataaaatataaatattgacaaatagctatttattacataaaaaatgatcgt 1129197  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  || ||||||||||| ||||||| | ||| |||||||||| |||||||    
T  1129196 taatttataaaattatgaagcaggagtaccggtacacctcactttgtgagtgtaccgtagaagt 1129133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 50465716 - 50465875
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| ||||||    
T  50465716 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaat 50465814  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     ||||||||| | |||||| || ||||| |||||   || || ||||||||||||||||||    
T  50465815 ttataaattttgtaaaacaagaataccggtacactcaaaattgtgagtgtaccatagaagt 50465875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 271 - 440
Target Start/End: Original strand, 41982217 - 41982387
Alignment:
Q  271 ttattattattcttataaacaatg-aatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttat-aaaa 368  Q
    ||||||| |||||||||||||||| |||| ||| |||||||| ||||||| | |||| | | ||||||||   ||||||||||||||||||  || ||||    
T  41982217 ttattatgattcttataaacaatgaaatgatgt-tttttcttatgaaatgttgttttataaaatataaatattgacaaataactatttattacataaaaa 41982315  T
Q  369 ttgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     | || || ||| |||||| ||| |||  | |||||||||||||||| | ||| |||||||||| |||||||    
T  41982316 attatcgtcaatttataaaattataaagtaagagtaccgatacacctcactttgtgagtgtaccgtagaagt 41982387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 431
Target Start/End: Complemental strand, 26457120 - 26456966
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| ||||||||| || | | | ||||||||   |||||||| |||||||||  ||||||  |||| ||    
T  26457120 attcttataaacaatgaaatgatgtttttttcttatgaaatgatgttctataaaatataaatattgacaaatagctatttattacataaaaaatgatcgt 26457021  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtac 431  Q
    |||| |||||| |||  || ||||||||||| | ||||| | |||||||||||||    
T  26457020 taatttataaaattatgaagcaggagtaccggttcacctcactttatgagtgtac 26456966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 440
Target Start/End: Complemental strand, 35375613 - 35375515
Alignment:
Q  343 gacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatga-gtgtaccatagaagt 440  Q
    |||||||| || ||||||| ||| || ||||||||||| ||||||||||  || || |||||||||||||||| ||||| ||| ||||||| |||||||    
T  35375613 gacaaatagctctttatttaatataaatgattgttaatttataaatttatgaatcaagagtaccgatacacctcaatttgtgaggtgtaccgtagaagt 35375515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 422
Target Start/End: Original strand, 41902215 - 41902333
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||| ||||||||| | ||||||| | ||||||||| || ||| ||  |||||| |||| ||||   ||| ||||||  ||||||| ||    
T  41902215 tttttcttatgaaataatattttctaaaatataaaagtcgacaaatagctcttttttacataaaaatgatcgttagcttattaatttatgaaacaggtgt 41902314  T
Q  404 accgatacaccttaattta 422  Q
    |||||||||||||||||||    
T  41902315 accgatacaccttaattta 41902333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 279 - 391
Target Start/End: Original strand, 29384923 - 29385035
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||||| |  ||| |||||||  ||| ||| |||||||| | |||||||    |||||||||||| ||||||||||||| ||||||||    
T  29384923 attcttataaacaatgaaattatgtttttttctcatgagatggtattttctaaaatataaacattgacaaataactacttattttataaaa-tgattgtt 29385021  T
Q  378 aatgtataaattta 391  Q
    ||| ||||||||||    
T  29385022 aatttataaattta 29385035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 279 - 438
Target Start/End: Complemental strand, 4817242 - 4817082
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||| ||||||||||||| || ||| |||||||| |||| |||| || | | | ||||||||   || |||||||||||||||  |||||| |||| |||    
T  4817242 attcgtataaacaatgaaatgatgtttttttcttatgaattgatgttctataaaatataaatattgataaataactatttattacataaaaatgatcgtt 4817143  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaa 438  Q
    ||| |||||| ||| |||  | |||||||| ||||||| | ||| |||||||||| |||||    
T  4817142 aatttataaaattataaagtaagagtaccggtacacctcattttgtgagtgtaccgtagaa 4817082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 32720229 - 32720389
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||  ||||| || ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| ||||||    
T  32720229 cttataaacaatgaaatgatggtttttttttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaat 32720328  T
Q  381 gtataaatttaga-aaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| ||||||||||||||   || || ||||||||||||||||||    
T  32720329 ttatatattttgtgaaacaagagtaccgatacactcaaaattgtgagtgtaccatagaagt 32720389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 44962847 - 44963007
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||  ||||| || ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  44962847 cttataaacaatgaaatgatggtttttttttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 44962946  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| | |||||| |||||||| ||||| | || || ||||||||||||||||||    
T  44962947 ttatatattttgtaaaacaagagtaccggtacacttaaaattgtgagtgtaccatagaagt 44963007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 8966093 - 8966140
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgt 259  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  8966093 tttatcgctcataatagagaactttgattattttatacgataatatgt 8966140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 313 - 440
Target Start/End: Complemental strand, 52082174 - 52082047
Alignment:
Q  313 tgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgataca 412  Q
    |||||||||||||||| | ||||||||  | |||||||||| ||||||| |||||| | || ||| || |||||||||   ||  | |||||||| ||||    
T  52082174 tgaaatgatattttctaaaatataaatatcaacaaataactttttatttcataaaaataatagttcatttataaatttttgaagtaagagtaccggtaca 52082075  T
Q  413 ccttaatttatgagtgtaccatagaagt 440  Q
    |||||||||  | ||||||| |||||||    
T  52082074 ccttaatttgcgggtgtaccgtagaagt 52082047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 304 - 390
Target Start/End: Original strand, 881990 - 882076
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt 390  Q
    |||||||| ||| ||||  |||||| | ||||||||   ||||||||||| |||||||||||||| |||| |||||| |||||||||    
T  881990 tttttcttatgatatgacgttttctaaaatataaatattgacaaataactttttattttataaaaatgatcgttaatttataaattt 882076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 440
Target Start/End: Complemental strand, 26409732 - 26409634
Alignment:
Q  343 gacaaataactatttattttataaaattgattgttaatgtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||||||||| ||||||| |||||| |||| |||||| ||||||||| |  ||||| |||||||| |||||   ||||| |||||||||| |||||||    
T  26409732 gacaaataactttttatttcataaaaatgatcgttaatttataaattttgtgaaacaagagtaccggtacactaaaatttctgagtgtaccgtagaagt 26409634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 282 - 390
Target Start/End: Complemental strand, 7157201 - 7157093
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| |||||||||||||||| | ||||||||   |||||||| || ||||||| || ||| || | ||||||    
T  7157201 cttataaacaatgaaatgatg-gtttttcttatgaaatgatattttctaaaatataaatattgacaaatacctttttatttcattaaagtggtcgttaat 7157103  T
Q  381 gtataaattt 390  Q
     |||||||||    
T  7157102 ttataaattt 7157093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 15804528 - 15804665
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| ||| ||||| |||||| | |||||||    ||||||||||||||||||| |||||||   || ||||| ||||||||||   | |||||||    
T  15804528 tttttcttatgagatgatgttttctaaaatataaacattgacaaataactatttatttcataaaatgattttttaatttataaatttatgtagcaggagt 15804627  T
Q  404 accgatacaccttaatttatga-gtgtaccatagaagt 440  Q
    | || ||||||| |||| |||| ||||||| |||||||    
T  15804628 atcggtacacctcaattgatgaggtgtaccgtagaagt 15804665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 37567484 - 37567621
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   ||||||||  | ||||||| || ||| ||||  ||||| |||| |||| |  ||||| |||    
T  37567484 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacatttttatttcattaaagtgatctttaatttatatattttgtgaaacaagag 37567583  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||||||   || |||||||||||||||||||||    
T  37567584 taccgatacactcaaaattatgagtgtaccatagaagt 37567621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 441
Target Start/End: Original strand, 40650433 - 40650474
Alignment:
Q  400 gagtaccgatacaccttaatttatgagtgtaccatagaagtc 441  Q
    ||||||||||||||| ||||||| ||||||||||||||||||    
T  40650433 gagtaccgatacaccgtaatttacgagtgtaccatagaagtc 40650474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 283 - 422
Target Start/End: Original strand, 19608535 - 19608675
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| || | | |||||||| |||||| ||||||||| | ||||||| | ||||||||| || ||| ||  |||||| |||| |||||      
T  19608535 ttataaacaatgaaatgatatttttttcttatgaaataatattttctaaaatataaaagtcgacaaatagctcttttttacataaaaatgatcgttaact 19608634  T
Q  382 tataaatttagaaaacaggagtaccgatacaccttaattta 422  Q
    |||  |||||  ||||||| ||| || ||||||||||||||    
T  19608635 tattgatttatgaaacaggtgtatcggtacaccttaattta 19608675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 27647746 - 27647882
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||| ||||||| | ||||||||  | ||||||| || ||||||  |||||| | || |||||| || | ||||   ||| ||||||    
T  27647746 tttttcttatgaaatgacattttctaaaatataaatatcaacaaatatctctttattccataaaaataatagttaatttaaagatttttgaaataggagt 27647845  T
Q  404 accgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||| ||||||||||||||  | ||||||| |||||||    
T  27647846 accaatacaccttaatttgcgggtgtaccgtagaagt 27647882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 440
Target Start/End: Original strand, 51235765 - 51235924
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  51235765 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 51235863  T
Q  381 gtataaatttaga-aaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| |||||||| |||||   || || ||||||||||||||||||    
T  51235864 ttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagt 51235924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 33830771 - 33830933
Alignment:
Q  279 attcttataaacaatg-aatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    |||||||||||||||| |||| || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  ||    
T  33830771 attcttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcatt 33830869  T
Q  378 aatgtata-aatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||| |||| | ||||  ||||| |||||||  |||||   || || ||||||||||||||||||    
T  33830870 aatttatatattttatgaaacaagagtaccagtacactcaaaattgtgagtgtaccatagaagt 33830933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 40474194 - 40474237
Alignment:
Q  397 caggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||    
T  40474194 caggagtaccggtacacctcactttatgagtgtaccatagaagt 40474237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 51344613 - 51344774
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| ||| ||||| || | | | ||||||||   |||||||| |||||||||  ||||||  |||| ||    
T  51344613 attcttataaacaatgaaatgatgt-tttttcttatgagatgatgttctataaaatataaattttgacaaatagctatttattacataaaaaatgatcgt 51344711  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  || ||||||||||| ||||||||| ||| | |||||||| |||||||    
T  51344712 taat-tataaaattatgaagcaggagtaccggtacaccttactttgtaagtgtaccgtagaagt 51344774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 26850286 - 26850328
Alignment:
Q  398 aggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||||||||||||| | ||||| ||||||||||||||||    
T  26850286 aggagtaccgatacacctcattttataagtgtaccatagaagt 26850328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 279 - 423
Target Start/End: Complemental strand, 39253056 - 39252911
Alignment:
Q  279 attcttataaacaatg-aatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttat-aaaattgattgt 376  Q
    |||||||||||||||| |||| ||| |||||||| ||||||||| |||| | | ||||||||   |||||||| |||||||||  || |||| | |||||    
T  39253056 attcttataaacaatgaaatgatgt-tttttcttatgaaatgatgttttataaaatataaatattgacaaatagctatttattacataaaaaataattgt 39252958  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    |||| |||||| |||  ||| |  ||||||| ||||||||| |||||    
T  39252957 taatttataaaattatgaaataaaagtaccggtacaccttactttat 39252911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 287 - 440
Target Start/End: Complemental strand, 42657971 - 42657817
Alignment:
Q  287 aaacaatgaatggtgtgttt-ttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtata 385  Q
    |||||||||||| ||| ||  ||||| ||||||||| |||||| | ||||||||||| | |||||||| ||||| |  ||||||||||  ||||| ||||    
T  42657971 aaacaatgaatgatgttttggttcttatgaaatgatgttttctaaaatataaatgccaataaataactctttatatcttaaaattgatcattaatttata 42657872  T
Q  386 aatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     | |||| || || ||||||    ||| || ||||||| |||||||| |||||||    
T  42657871 gaattaggaagcaagagtacaagaacatctcaatttataagtgtaccgtagaagt 42657817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 302 - 439
Target Start/End: Original strand, 48990558 - 48990696
Alignment:
Q  302 tgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt-agaaaacagg 400  Q
    |||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||| || || |||| |||| | |||||| |    
T  48990558 tgtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaaatgatttttgatttatatattttataaaacaag 48990657  T
Q  401 agtaccgatacaccttaatttatgagtgtaccatagaag 439  Q
    ||||||| | |||   || || |||||||||||||||||    
T  48990658 agtaccggtgcactcaaaattgtgagtgtaccatagaag 48990696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 118; Significance: 1e-59; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 118; E-Value: 1e-59
Query Start/End: Original strand, 224 - 440
Target Start/End: Complemental strand, 34595187 - 34594975
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    ||||||||||||||||||||||||| ||||||||||          |||||||| |||||||||||||||||||| ||||||||| |  |||||||||||    
T  34595187 aatagagaactttgattattttatacgataatatgtaaaaaaa---cttattatgattcttataaacaatgaatgatgtgtttttatcatgaaatgatat 34595091  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||||||| |||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  34595090 tttctgatatataaatgctgacaaataactatttatttcataaaattgattgttaatgtataaatttag-aaacagaagtatcgatacaccttaatttat 34594992  T
Q  424 gagtgtaccatagaagt 440  Q
     | |||||| |||||||    
T  34594991 aaatgtaccctagaagt 34594975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 11038277 - 11038050
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||          |||||||| | |||||||||||||||||| ||||||||| ||    
T  11038277 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaaaa-cttattatgactcttataaacaatgaatgatgtgtttttttt 11038179  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
     |||||||||||||||||||||| ||||||||| |||||||| ||||||| ||||||||||||||||||| |||||||||  || |||||||| || |||    
T  11038178 atgaaatgatattttctgagatacaaatgccgataaataactttttatttcataaaattgattgttaatgcataaatttaagaagcaggagtatcggtac 11038079  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||||||||||||||| | || |||||||    
T  11038078 accttaatttatgagtttgccgtagaagt 11038050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 224 - 440
Target Start/End: Complemental strand, 1434025 - 1433811
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttc-tgaaatgata 322  Q
    ||||||||||||| ||||||||||| ||||||||||          |||||||| | |||||||||||||||||| ||| ||||| ||  ||||||||||    
T  1434025 aatagagaactttaattattttatacgataatatgtaaaaaaaa--cttattatgactcttataaacaatgaatgatgtttttttttttatgaaatgata 1433928  T
Q  323 ttttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaattta 422  Q
    |||||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||| |||||||||| || ||||| ||||| ||||||||||||||    
T  1433927 ttttctgagatacaaatgc-gacaaataactttttatttcataaaattgattgttaatgcataaatttaggaagcaggaataccggtacaccttaattta 1433829  T
Q  423 tgagtgtaccatagaagt 440  Q
    ||||||||||||||||||    
T  1433828 tgagtgtaccatagaagt 1433811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 98; E-Value: 1e-47
Query Start/End: Original strand, 271 - 423
Target Start/End: Original strand, 28967765 - 28967917
Alignment:
Q  271 ttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgata-ttttctgagatataaatgccgacaaataactatttattttataaaat 369  Q
    ||||||| |||||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||     
T  28967765 ttattatgattcttataaacaatgaatgatgtgtttttcttatgaaatgatatttttctgagatataaatgccgacaaataaccatttatttcataaaa- 28967863  T
Q  370 tgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||||| ||||| |||||||||| ||| ||||||||||| |||||||||||||||    
T  28967864 tgatttttaatatataaatttaaaaagcaggagtaccggtacaccttaatttat 28967917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 181 - 440
Target Start/End: Complemental strand, 42881300 - 42881044
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatta 279  Q
    |||||||| | |||||||| |||||||||| ||| ||| |||| |||||||||||||||||||| |||| ||||||||||           ||| ||| |    
T  42881300 caccaaaaacgtcaatgaaataaaattgaatttttatctttcataatagagaactttgattattgtatacgataatatgttaaaaat----ttactatga 42881205  T
Q  280 ttcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaa 379  Q
    ||||||||||||||||||| |||||||||||| ||| | |||||||||| | ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  42881204 ttcttataaacaatgaatgatgtgtttttcttatgagaagatattttctaaaatataaatgccgataaataactatttatttcataaaattgattgttaa 42881105  T
Q  380 tgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    | |||| |||||  ||  |  ||||||| ||||||  ||||||  ||||||||||||||||    
T  42881104 tttatagatttaagaagtaaaagtaccggtacaccacaatttacaagtgtaccatagaagt 42881044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 212 - 439
Target Start/End: Complemental strand, 33491829 - 33491606
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||            || ||| |||||||||||||||||||| ||  ||||||||    
T  33491829 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaagaaa----tactatgattcttataaacaatgaatgatgcatttttctt 33491734  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||||||||| |||| | |||| |||||  || || |||||||| |||    
T  33491733 ctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtac 33491634  T
Q  412 accttaatttatgagtgtaccatagaag 439  Q
    || | |||||| ||||||||| ||||||    
T  33491633 acttcaatttacgagtgtaccgtagaag 33491606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 4e-41
Query Start/End: Original strand, 224 - 440
Target Start/End: Complemental strand, 43959210 - 43958998
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    ||||||||||||||||||||||||| ||||||||||           ||||||| | |||||||||||||||||  |||||||||||| ||||||||| |    
T  43959210 aatagagaactttgattattttatacgataatatgttaaaatt----ttattatgactcttataaacaatgaataatgtgtttttcttatgaaatgatgt 43959115  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||||| | |||||||||||||||||| ||||||||||| ||||||||||| |||||| |||| |||||| ||  | |||||||| |||||| |||||||     
T  43959114 tttctaaaatataaatgccgacaaatgactatttatttcataaaattgatcgttaatttatagatttaggaagtaagagtaccggtacaccataatttac 43959015  T
Q  424 gagtgtaccatagaagt 440  Q
     |||||||| |||||||    
T  43959014 aagtgtaccgtagaagt 43958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 212 - 440
Target Start/End: Original strand, 408241 - 408465
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||||||| |||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||| | ||  ||||||||    
T  408241 tttatcgctcataatagagagctttgattattttatacgataatatgtaaaagaa----ttactatgattcttataaacaatgaacgatgcatttttctt 408336  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | |||||||| ||||||||||||||||||||| ||||||||||| |||| | |||| |||||  || || |||||||| |||    
T  408337 ctgaaatcatattttctaaaatataaattccgacaaataactatttatttaataaaattgatcgttagtttatagatttatgaagcaagagtaccggtac 408436  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| ||||||||| |||||||    
T  408437 acctcaatttacgagtgtaccgtagaagt 408465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 30060695 - 30060534
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtta 378  Q
    |||||||||||||||||| | || |||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  30060695 attcttataaacaatgaacgatgagtttttcttctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcataaaattgatcgtta 30060596  T
Q  379 atgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     | |||| |||||  || || ||||| || ||||||| |||||| ||||||||| |||||||    
T  30060595 gtttatagatttatgaagcaagagtatcggtacacctcaatttacgagtgtaccgtagaagt 30060534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 46663567 - 46663728
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtta 378  Q
    |||||||||||||||||||| || |||||||||| ||||| ||||||| | | |||||||||||||||||||||||||||||| |||||||||||  |||    
T  46663567 attcttataaacaatgaatgatgcgtttttcttcggaaatcatattttttaaaatataaatgccgacaaataactatttatttcataaaattgatcatta 46663666  T
Q  379 atgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    || |||| |||||  || || |||||||| ||||||| |||||| ||||||||| |||||||    
T  46663667 atttatagatttatgaagcaagagtaccggtacacctcaatttacgagtgtaccgtagaagt 46663728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 212 - 430
Target Start/End: Original strand, 51944606 - 51944820
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||||||||||||||||| |||||| ||||||||||           ||| ||| |||||||||||||||||||| || |||||||||    
T  51944606 tttatcgctcataatagagaactttgattactttatacgataatatgtaaaaaaa----ttactatgattcttataaacaatgaatgatgcgtttttctt 51944701  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    | ||||| ||||||| | | ||||||||||||| |||||||||||||||| |||||||||||  ||||| ||||||||||  || ||  |||||| ||||    
T  51944702 cggaaatcatattttttaaaatataaatgccgataaataactatttatttcataaaattgatcattaatttataaatttatgaagcaaaagtaccaatac 51944801  T
Q  412 accttaatttatgagtgta 430  Q
    |||| |||||| |||||||    
T  51944802 acctcaatttacgagtgta 51944820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 212 - 440
Target Start/End: Original strand, 37748605 - 37748829
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||| ||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| || |||||||||    
T  37748605 tttatcgctcataatagagaattttgattattttatacgataatatgtaaaaaaa----ttactatgattcttataaacaatgaatgatgcgtttttctt 37748700  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| | ||||| | | |||||||||||||||||||||||||||||| ||||||||||| |||| | |||| |||||  ||||| |||||||  ||     
T  37748701 ctgaaatcacattttttaaaatataaatgccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaaacaagagtaccagtat 37748800  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| ||| ||  |||||||| |||||||    
T  37748801 acctcaatgtaccagtgtaccgtagaagt 37748829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 279 - 391
Target Start/End: Complemental strand, 27736753 - 27736641
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtta 378  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  27736753 attcttataaacaatgaacgatgtgtttttcttctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcataaaattgatcgtta 27736654  T
Q  379 atgtataaattta 391  Q
     | |||| |||||    
T  27736653 gtttatagattta 27736641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 5e-25
Query Start/End: Original strand, 224 - 440
Target Start/End: Original strand, 46548942 - 46549155
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    ||||||||||||||||||||||||| ||||||||||            |||||| |||| |||||||||  |||| |||||||||||| |||||| ||||    
T  46548942 aatagagaactttgattattttatacgataatatgtaaaaataata--tattatgattcatataaacaacaaatgatgtgtttttcttatgaaataatat 46549039  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||| | | ||||||||||| |||| ||||||||||||| |||||||| || |||||| |||| ||||||||| || ||||| |  |||| | |||||||     
T  46549040 tttttaaaatataaatgccaacaa-taactatttatttcataaaatttatcgttaatttatagatttagaaagcaagagtatcagtacatcataatttac 46549138  T
Q  424 gagtgtaccatagaagt 440  Q
    ||||||| | |||||||    
T  46549139 gagtgtatcgtagaagt 46549155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 50776012 - 50776174
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| ||||||||| |||| | | ||||||||   ||||||||| ||||||||| ||||||  |||||||    
T  50776012 attcttataaacaatgaaatgatgt-tttttcttatgaaatgatgttttataaaatataaatattgacaaataattatttatttcataaaaaatgattgt 50776110  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  ||| |  ||||||||||||||| | ||||| |||||||| |||||||    
T  50776111 taatttataaaattatgaaaaaatagtaccgatacacctcattttataagtgtaccgtagaagt 50776174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 283 - 440
Target Start/End: Original strand, 31908686 - 31908844
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| || ||  |||||||| |||||||||||||| | | ||||||||  | ||||||| || ||||||| ||||||||||| ||||||     
T  31908686 ttataaacaatgaaatgatgattttttcttatgaaatgatattttttaaaatataaatatcaacaaatagctttttatttcataaaattgatagttaatt 31908785  T
Q  382 tataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||||   ||  | |||||||| |||||||||||||  | ||||||| |||||||    
T  31908786 tataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 31908844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 320 - 440
Target Start/End: Original strand, 50189295 - 50189415
Alignment:
Q  320 atattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaat 419  Q
    ||||||||| | |||||||||||||||||||  ||||||||| ||||||||||| |||| | |||| |||||  || || |||||| | ||||||| |||    
T  50189295 atattttctaaaatataaatgccgacaaatatttatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtactggtacacctcaat 50189394  T
Q  420 ttatgagtgtaccatagaagt 440  Q
    ||| ||||||||  |||||||    
T  50189395 ttacgagtgtactgtagaagt 50189415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 56303078 - 56303240
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| ||| ||||| || | | | ||||||||   ||||||||| ||||||||  ||||||  | || ||    
T  56303078 attcttataaacaatgaaatgatgt-tttttcttatgagatgatgttctataaaatataaattttgacaaataaatatttattacataaaaaattatcgt 56303176  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| ||| ||| ||||||||||| ||||||| | ||||||||||||||||||||||    
T  56303177 taatttataaaattataaagcaggagtaccggtacacctcactttatgagtgtaccatagaagt 56303240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 346 - 438
Target Start/End: Complemental strand, 39412267 - 39412175
Alignment:
Q  346 aaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatga-gtgtaccatagaa 438  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||   | |||||||| || ||||||||||||| ||| ||||||| |||||    
T  39412267 aaataactatttattttataaaat-gattgttaatttataaatttatgtagcaggagtatcggtacaccttaatttgtgaggtgtaccgtagaa 39412175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 36091324 - 36091460
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||||||||||| | ||| ||||  | ||||||| || ||||||| |||||| |||| |||||| |||||||||   ||  | ||||    
T  36091324 tttttcttatgaaatgatattttctaaaatacaaatatcaacaaatagctttttatttcataaaaatgatagttaatttataaatttttgaagtaagagt 36091423  T
Q  404 accgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| ||||||||||||||   ||||||| |||||||    
T  36091424 accggtacaccttaatttacaggtgtaccgtagaagt 36091460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 422
Target Start/End: Complemental strand, 34936695 - 34936577
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||| ||||||||| | ||||||| | |||| |||| |||||| ||  |||||| |||| |||||  |||  |||||  ||||||||||    
T  34936695 tttttcttatgaaataatattttctaaaatataaaagtcgacgaatagctattttttacataaaaatgatcgttaacttattgatttatgaaacaggagt 34936596  T
Q  404 accgatacaccttaattta 422  Q
    |||| ||||||||||||||    
T  34936595 accggtacaccttaattta 34936577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 343 - 440
Target Start/End: Original strand, 126882 - 126980
Alignment:
Q  343 gacaaataactatttattttataaaat-tgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||||||||||| |  ||||||  |||| ||| || |||||| |||  || ||||||||||||||||||| | |||||||||||||| |||||||    
T  126882 gacaaataactatttactacataaaaaatgatcgttcatttataaaattaagaagcaggagtaccgatacacctcattttatgagtgtaccgtagaagt 126980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 282 - 438
Target Start/End: Complemental strand, 23639398 - 23639242
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   ||||| || || ||||||| || ||| |||| ||||||    
T  23639398 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaa-tacctttttatttcattaaagtgatcgttaat 23639301  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaa 438  Q
     |||| |||| | ||||||  ||||||| ||||| | || |||||||||||||||||||    
T  23639300 ttatatattttgtaaaacaatagtaccggtacacttaaaattatgagtgtaccatagaa 23639242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 304 - 438
Target Start/End: Original strand, 56272844 - 56272978
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||| ||||||||| | ||||||| | ||| |||||||| ||| ||  |||||| |||| ||||   |||  |||||  ||||||| ||    
T  56272844 tttttcttatgaaataatattttctaaaatataaaagtcgataaataactcttttttacataaaaatgatcgttagcttattgatttatgaaacaggtgt 56272943  T
Q  404 accgatacaccttaatttatgagtgtaccatagaa 438  Q
    |||| |||||||||||||| | ||||||| |||||    
T  56272944 accggtacaccttaatttaagggtgtaccgtagaa 56272978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 421
Target Start/End: Original strand, 9858515 - 9858632
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| | |||||||||||||| | ||||||||  | ||||||| || ||||||| |||||| | || |||||| |||||||||   ||  | ||||    
T  9858515 tttttcttataaaatgatattttctaaaatataaatatcaacaaatagctttttatttcataaaaataatagttaatttataaatttttgaagtaagagt 9858614  T
Q  404 accgatacaccttaattt 421  Q
    |||| |||||||||||||    
T  9858615 accggtacaccttaattt 9858632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 38955183 - 38955046
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtata-aatttagaaaacaggag 402  Q
    |||||||| |||||||||||||||| | ||||||||   |||||||| || ||||||| || ||| ||||  ||||| |||| | ||||  ||||| |||    
T  38955183 tttttcttatgaaatgatattttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaatttatatattttatgaaacaagag 38955084  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| |||||   || || ||||||||||||||||||    
T  38955083 taccggtacactcaaaattgtgagtgtaccatagaagt 38955046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 42244678 - 42244541
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttag-aaaacaggag 402  Q
    |||||||| ||||||||| |||| | | ||||||||   |||||||| || ||||||| || ||| |||| |||||| |||| |||| | |||||| |||    
T  42244678 tttttcttatgaaatgatgttttataaaatataaatattgacaaatatctttttatttcattaaagtgatcgttaatttatatattttgtaaaacaagag 42244579  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| |||||   || || ||||||||||||||||||    
T  42244578 taccggtacactcaaaattgtgagtgtaccatagaagt 42244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 46630786 - 46630649
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| |||||| |||| |||| |  ||||| |||    
T  46630786 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaatttatatattttgtgaaacaagag 46630687  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| |||||   || || ||||||||||||||||||    
T  46630686 taccggtacactcaaaattgtgagtgtaccatagaagt 46630649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 259
Target Start/End: Original strand, 50187677 - 50187722
Alignment:
Q  214 tatcgttcaaaatagagaactttgattattttatatgataatatgt 259  Q
    ||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  50187677 tatcgctcataatagagaactttgattattttatacgataatatgt 50187722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 52257398 - 52257535
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt-agaaaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| |||||| |||| |||| |  ||||| |||    
T  52257398 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaaatgatcgttaatttatatattttatgaaacaagag 52257497  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| ||||||   || |||||| ||||||||||||||    
T  52257498 taccaatacactcaaaattatgaatgtaccatagaagt 52257535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 440
Target Start/End: Complemental strand, 10779154 - 10778995
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || |||||||||  ||||||||||||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  10779154 cttataaacaatgaaatgatg-gtttttcttacgaaatgatattttctaaaatataaatattgacaaatatctttttatttcattaaagtgatctttaat 10779056  T
Q  381 gtataaatttag-aaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| |||||||| |||||   || || ||||||||||||||||||    
T  10779055 ttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagt 10778995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 353 - 432
Target Start/End: Complemental strand, 352565 - 352486
Alignment:
Q  353 tatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtacc 432  Q
    |||||||| ||||||| |||| |||||| |||||| |||  ||||||||||| || ||||||| | ||| ||||||||||    
T  352565 tatttattatataaaaatgatcgttaatttataaaattatgaaacaggagtatcggtacacctcactttgtgagtgtacc 352486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 432
Target Start/End: Original strand, 4720798 - 4720865
Alignment:
Q  365 aaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtacc 432  Q
    ||||||||| ||| || |||||| |||  || ||||||||||||||||||| | ||||||||||||||    
T  4720798 aaaattgatcgttcatttataaaattaagaagcaggagtaccgatacacctcattttatgagtgtacc 4720865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 5970865 - 5970703
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttat-aaaattgattgt 376  Q
    |||||||||||||||||| || ||| |||||||| |||||||||||| | | | ||||||||   |||||||| |||||||||  || |||| ||||| |    
T  5970865 attcttataaacaatgaaatgatgt-tttttcttatgaaatgatattctataaaatataaatattgacaaatagctatttattacataaaaaatgattat 5970767  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  || || |||||||| |||| || | | | |||||||||| |||||||    
T  5970766 taatttataaaattatgaagcaagagtaccggtacatctcactatgtgagtgtaccgtagaagt 5970703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 346 - 440
Target Start/End: Original strand, 15060863 - 15060957
Alignment:
Q  346 aaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgag-tgtaccatagaagt 440  Q
    |||||||| ||||||||||||||| |||| ||||  ||| |||||   || ||||||||||||| ||||| |||||||||| |||||| |||||||    
T  15060863 aaataactctttattttataaaat-gatttttaaattatcaatttttgaagcaggagtaccgatgcacctcaatttatgagatgtaccgtagaagt 15060957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 432
Target Start/End: Complemental strand, 48647185 - 48647031
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat-tgattgt 376  Q
    |||||||||||||||||| || ||| |||||| | ||||||||| || | | | |||||||||  ||||||||  ||||||||| | ||||  |||| ||    
T  48647185 attcttataaacaatgaaatgatgt-tttttcatatgaaatgatgttctataaaatataaatgttgacaaatagttatttatttcacaaaaaatgatcgt 48647087  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtacc 432  Q
    |||| |||||| |||  |||||  |||||| |||||||| | ||||||||||||||    
T  48647086 taatttataaaattatgaaacaaaagtaccaatacacctcattttatgagtgtacc 48647031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 432
Target Start/End: Original strand, 50733185 - 50733252
Alignment:
Q  365 aaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtacc 432  Q
    |||| |||| ||| || |||||| ||| |||||||||||||||||||| |||| ||| ||||||||||    
T  50733185 aaaaatgatcgttcatttataaaattaaaaaacaggagtaccgatacatcttattttgtgagtgtacc 50733252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 369
Target Start/End: Original strand, 52940722 - 52940812
Alignment:
Q  279 attcttataaacaatg-aatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat 369  Q
    |||||||||||||||| |||| ||| |||||||| | ||||||| |||||| | ||||||||  ||| |||||||| ||||||| |||||||    
T  52940722 attcttataaacaatgaaatgatgt-tttttcttataaaatgatgttttctaaaatataaatatcgataaataactctttatttcataaaat 52940812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 365 - 440
Target Start/End: Original strand, 54996430 - 54996505
Alignment:
Q  365 aaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||| |||||| |||||| |||  |||||||||||||| ||||||| | ||||||| ||||| ||||||||    
T  54996430 aaaaatgatcgttaatttataaaattatgaaacaggagtaccgttacacctcactttatgaatgtactatagaagt 54996505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 304 - 431
Target Start/End: Complemental strand, 55060392 - 55060265
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    ||||| || |||||||||||||||| | ||||||| | ||||| ||| || | ||||  |||||| ||||||||||| |||  |||||  ||| |||  |    
T  55060392 ttttttttatgaaatgatattttctaaaatataaaagtcgacagatagctctatattacataaaaatgattgttaatttattgatttatgaaataggtat 55060293  T
Q  404 accgatacaccttaatttatgagtgtac 431  Q
     |||||||||||||||||| | ||||||    
T  55060292 gccgatacaccttaatttaagggtgtac 55060265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 272 - 440
Target Start/End: Complemental strand, 9356555 - 9356385
Alignment:
Q  272 tattattattcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttat-aaaat 369  Q
    |||||| |||||||||||||||||| || | | |||||||| |||||| ||||| | | | ||||||||    ||||||| ||||||||||||| ||||     
T  9356555 tattatgattcttataaacaatgaaatgatttttttttcttatgaaataatattctataaaatataaatattaacaaatagctatttattttataaaaaa 9356456  T
Q  370 tgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| ||||| |||||| |||  || ||| |||||  ||||| || | ||| ||||| |||| |||||||    
T  9356455 tgatttttaatttataaaattatgaagcagaagtactaatacatctcattttgtgagtataccgtagaagt 9356385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 370
Target Start/End: Complemental strand, 16004696 - 16004608
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaatt 370  Q
    ||||||||||||||| || || ||||||||| |||||||||||||||| | ||||||||   |||||||| || ||||||| || |||||    
T  16004696 cttataaacaatgaaatgatg-gtttttcttatgaaatgatattttctaaaatataaatattgacaaatacctttttatttcattaaatt 16004608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 24292244 - 24292381
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    ||||| || ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  ||||| |||| |||| |  ||||| |||    
T  24292244 ttttttttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaatttatatattttgtgaaacaagag 24292343  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| ||||| | || || ||||||||||||||||||    
T  24292344 taccggtacacttaaaattgtgagtgtaccatagaagt 24292381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 27636006 - 27636143
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaa-aacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| ||| || ||||  ||||| ||||||||| |   |||| |||    
T  27636006 tttttcttatgaaatgatgttttctaaaatataaatatggacaaatagctttttatttcatataaatgatcattaatttataaattttgtggaacaagag 27636105  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| |||||   ||| |||||||||||| |||||||    
T  27636106 taccggtacactaaaatatatgagtgtaccgtagaagt 27636143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 390
Target Start/End: Complemental strand, 46222155 - 46222047
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| |||||||||||||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  46222155 cttataaacaatgaaatgatg-gtttttcttatgaaatgatattttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaat 46222057  T
Q  381 gtataaattt 390  Q
     |||| ||||    
T  46222056 ttatatattt 46222047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 324
Target Start/End: Original strand, 50187734 - 50187783
Alignment:
Q  275 tattattcttataaacaatgaatggtgtgtttttcttctgaaatgatatt 324  Q
    ||| |||||||||||||||||||| ||  ||||||||||||||| |||||    
T  50187734 tatgattcttataaacaatgaatgatgcatttttcttctgaaatcatatt 50187783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 282 - 386
Target Start/End: Complemental strand, 54505738 - 54505633
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || ||| |||||||| ||| ||||  |||||| | ||||||||   ||||||||| | |||||||||||||| ||||  |||||    
T  54505738 cttataaacaatgaaatgatgtttttttcttatgatatgacgttttctaaaatataaatattgacaaataaatttttattttataaaaatgatcattaat 54505639  T
Q  381 gtataa 386  Q
     |||||    
T  54505638 ttataa 54505633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 3e-57; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 3e-57
Query Start/End: Original strand, 224 - 432
Target Start/End: Original strand, 15591574 - 15591779
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    ||||||||||||||||||||||||| ||||||||||          |||||||| | |||||||||||||||||| |||||||||||| |||||||||||    
T  15591574 aatagagaactttgattattttatacgataatatgtaaaaaaa---cttattatgactcttataaacaatgaatgatgtgtttttcttatgaaatgatat 15591670  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||||| |||||||||| || ||| ||||||| |||||||||||||||    
T  15591671 tttctgagataaaaatgtcgacaaataactttttatttcataaaattgattgttaatgcataaatttaggaagcagaagtaccggtacaccttaatttat 15591770  T
Q  424 gagtgtacc 432  Q
    || ||||||    
T  15591771 gaatgtacc 15591779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 43631284 - 43631059
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||| ||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| || |||||||||    
T  43631284 tttatcgctcataatagagaactttaattattttatacgataatatgtaaaaaaaa---ttactatgattcttataaacaatgaatgatgcgtttttctt 43631188  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | ||||||||| |||||||||||||||||||| ||||||||||| |||| | |||| |||||  || || |||||||| |||    
T  43631187 ctgaaatcatattttctaaaatataaatgtcgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtac 43631088  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| ||| || |||||||||||||||||    
T  43631087 acctcaatctacgagtgtaccatagaagt 43631059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 212 - 431
Target Start/End: Complemental strand, 16087174 - 16086959
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| || |||||||||    
T  16087174 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaa----ttactatgattcttataaacaatgaatgatgcgtttttctt 16087079  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | ||||||||| |||||||||||||||||||| ||||||||||| |||| | |||| |||||  || || |||||||| |||    
T  16087078 ctgaaatcatattttctaaaatataaatgtcgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtac 16086979  T
Q  412 accttaatttatgagtgtac 431  Q
    |||| ||| || ||||||||    
T  16086978 acctcaatctacgagtgtac 16086959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 212 - 404
Target Start/End: Original strand, 41742753 - 41742942
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||||| ||||||||||||||||||||||||||| |           ||||||| |||||||||||||||||||| || |||||||||    
T  41742753 tttatcgctcataatagataactttgattattttatatgataatatataaaaaaaa---ttattatgattcttataaacaatgaatgatgcgtttttctt 41742849  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagta 404  Q
    ||||||| | ||||||| | |||||||||| ||||||||||||||||||| ||||||||||| |||||| |||| |||||  ||||| |||||    
T  41742850 ctgaaatcacattttctaaaatataaatgcagacaaataactatttatttcataaaattgatcgttaatttatagatttatgaaacaagagta 41742942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 181 - 439
Target Start/End: Original strand, 2290926 - 2291181
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatta 279  Q
    |||||||||| |||| ||| |||||||||| ||| |||| | | ||||||||||||||||||||||||| ||||||||||           ||| ||| |    
T  2290926 caccaaaagcgtcaacgaaataaaattgaatttttatcgattataatagagaactttgattattttatacgataatatgtaaaaaat----ttactatga 2291021  T
Q  280 ttcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaa 379  Q
    |||||||||||||||| |  ||| |||||||| |||||| ||||||||| | |||||||| ||||||||||||||||||||| |||||||||||  ||||    
T  2291022 ttcttataaacaatgattaatgtatttttcttatgaaataatattttctaaaatataaataccgacaaataactatttatttcataaaattgatcattaa 2291121  T
Q  380 tgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaag 439  Q
    | ||||||||| | |   | |||||||| ||||||| | |||| ||||||||| ||||||    
T  2291122 tttataaatttgggatgaaagagtaccggtacacctcattttacgagtgtaccgtagaag 2291181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 224 - 440
Target Start/End: Complemental strand, 15584757 - 15584545
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    |||||||||||||||||||||||||  |||||||||           ||| ||| |||||||||||||||  |||   |||||||||| |||||| ||||    
T  15584757 aatagagaactttgattattttatacaataatatgtaaaaaat----ttactatgattcttataaacaatagatgacttgtttttcttatgaaattatat 15584662  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatttat 423  Q
    ||||| | ||||||||||||| |||||||||||| ||||||||||||||| |||||| |||| |||||| ||||| |||||||| |||||  |||||||     
T  15584661 tttctaaaatataaatgccgataaataactatttgttttataaaattgatcgttaatttatagatttaggaaacaagagtaccggtacactgtaatttac 15584562  T
Q  424 gagtgtaccatagaagt 440  Q
    |||||| || |||||||    
T  15584561 gagtgtgccgtagaagt 15584545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 184 - 440
Target Start/End: Original strand, 23561253 - 23561513
Alignment:
Q  184 caaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattc 282  Q
    ||||||| |||| ||| |||||||||| ||| |||  ||  |||||||||||||||| |||||||||||||||||||           | | ||| ||||    
T  23561253 caaaagcatcaacgaaataaaattgaatttttatcactcgtaatagagaactttgataattttatatgataatatgtaaaaaaaa---tcactatgattc 23561349  T
Q  283 ttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgt 382  Q
    |||||||||||||||| | |||||||||| |||||||||||||||| | |||| |||||| |||||||||||||||||| ||||||||||| |||||| |    
T  23561350 ttataaacaatgaatgatatgtttttcttatgaaatgatattttctaaaatatcaatgcctacaaataactatttatttcataaaattgatcgttaattt 23561449  T
Q  383 ataaatttagaaaacagga------gtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||| |||||  || || ||      |||||| ||||||| |||||| |||||||||||||||||    
T  23561450 atagatttatgaagcacgagtaccggtaccggtacacctcaatttacgagtgtaccatagaagt 23561513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 212 - 440
Target Start/End: Original strand, 29682216 - 29682441
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||| ||||||||||| ||||||||||           ||||||| |||||||||||||||||||  ||||||||||||    
T  29682216 tttatcgctcataatagagaactttaattattttatacgataatatgtaaaaaaaa---ttattatgattcttataaacaatgaattatgtgtttttctt 29682312  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    | ||||| ||||||| | | |||||||||||||||||||||||||||||| ||||||||||| |||| | |||| |||||  |  || |||||| | | |    
T  29682313 cagaaatcatatttttttaaatataaatgccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgatgcaagagtactggtgc 29682412  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| ||||||||  |||||||    
T  29682413 acctcaatttacgagtgtactgtagaagt 29682441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 224 - 380
Target Start/End: Original strand, 17020219 - 17020371
Alignment:
Q  224 aatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttcttctgaaatgatat 323  Q
    |||||||||||||||||||||||||  |||||||||           ||| ||| |||||||||||||||||||| ||||||||||||| ||||| ||||    
T  17020219 aatagagaactttgattattttatacaataatatgtaaaaaaa----ttactatcattcttataaacaatgaatgatgtgtttttcttcagaaatcatat 17020314  T
Q  324 tttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||| | ||||||||||||||||||||||||||| || ||||||||||| ||||||    
T  17020315 tttctaaaatataaatgccgacaaataactatttacttaataaaattgatcgttaat 17020371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 279 - 440
Target Start/End: Complemental strand, 47258845 - 47258684
Alignment:
Q  279 attcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtta 378  Q
    ||||||||||||||||||||  ||||||||||| |||||||||||||| | | ||||||||||| | |||||| ||||||||||||||||||||| ||||    
T  47258845 attcttataaacaatgaatgacgtgtttttcttatgaaatgatattttttaaaatataaatgccaataaataaatatttattttataaaattgatcgtta 47258746  T
Q  379 atgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    || |||| | ||||||||||  |||| || || |||| ||||||  |||||| | |||||||    
T  47258745 atttatagacttagaaaacaaaagtaacggtaaacctcaatttagaagtgtagcgtagaagt 47258684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 283 - 440
Target Start/End: Complemental strand, 30936256 - 30936098
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| || ||  |||||||| |||||||||||||||| | ||||||||  | ||||||| || ||||||| ||||||||||| ||||||     
T  30936256 ttataaacaatgaaatgatgattttttcttatgaaatgatattttctaaaatataaatatcaacaaatagctttttatttcataaaattgatagttaatt 30936157  T
Q  382 tataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||||   ||  | |||||||| |||||||||||||  | ||||||| |||||||    
T  30936156 tataaatttttgaagtaagagtaccggtacaccttaatttgcgggtgtaccgtagaagt 30936098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 30878491 - 30878617
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||| ||||||||||||||||| ||||||||||           ||| ||| |||||||||||||||||||| ||||||||||||    
T  30878491 tttatcgctcataatagagtactttgattattttatacgataatatgtaaaaaaaaaa-ttactatgattcttataaacaatgaatgatgtgtttttctt 30878589  T
Q  312 ctgaaatgatattttctgagatataaat 339  Q
     |||||| ||||||| | | ||||||||    
T  30878590 atgaaatcatattttttaaaatataaat 30878617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 315 - 440
Target Start/End: Complemental strand, 44963952 - 44963827
Alignment:
Q  315 aaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacacc 414  Q
    |||||||||||||| | ||| ||||  | |||||||||| ||||||| |||||| |||| |||||| |||||||||   ||  | |||||||| ||||||    
T  44963952 aaatgatattttctaaaatacaaatatcaacaaataactttttatttcataaaaatgatagttaatttataaatttttgaagtaagagtaccggtacacc 44963853  T
Q  415 ttaatttatgagtgtaccatagaagt 440  Q
    |||| || || |||||||||||||||    
T  44963852 ttaaattgtgggtgtaccatagaagt 44963827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 304 - 440
Target Start/End: Complemental strand, 8578063 - 8577928
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||||||||| | | |||||| |   |||||||| ||||||||||||||||| |||| |||||| ||||||||||  ||  | ||||    
T  8578063 tttttcttatgaaatgatattttttaaaatataa-tattgacaaatacctatttattttataaaa-tgatcgttaatttataaatttatgaagtaagagt 8577966  T
Q  404 accgatacaccttaatttatga-gtgtaccatagaagt 440  Q
    |  | ||||||| ||||||||| |||||||||||||||    
T  8577965 attggtacacctcaatttatgaggtgtaccatagaagt 8577928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 283 - 390
Target Start/End: Original strand, 42975139 - 42975247
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| || ||| |||||||| |||||||||||||||| | ||||||||  | |||||||  | ||||||| |||||| | || ||||||     
T  42975139 ttataaacaatgaaatgatgtttttttcttatgaaatgatattttctaaaatataaatatcaacaaatagttttttatttcataaaaataatagttaatt 42975238  T
Q  382 tataaattt 390  Q
    |||||||||    
T  42975239 tataaattt 42975247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 315 - 438
Target Start/End: Original strand, 29273259 - 29273382
Alignment:
Q  315 aaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacacc 414  Q
    |||| ||||||||| | ||||||| | ||||||||| || ||| ||  |||||| |||| |||||  ||| |||| |  ||||||| |||||||||||||    
T  29273259 aaataatattttctaaaatataaaagtcgacaaatagctctttgttacataaaaatgatcgttaaattattaattcacgaaacaggtgtaccgatacacc 29273358  T
Q  415 ttaatttatgagtgtaccatagaa 438  Q
    |||||||| | ||||||| |||||    
T  29273359 ttaatttaagggtgtaccgtagaa 29273382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 283 - 421
Target Start/End: Complemental strand, 45857636 - 45857498
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| || ||| |||||||| | |||||||||||||| | ||||||||  | ||||||| || ||||||| |||||| | || ||||||     
T  45857636 ttataaacaatgaaatgatgt-tttttcttattaaatgatattttctaaaatataaatatcaacaaatagctttttatttcataaaagtaatagttaatt 45857538  T
Q  382 tataaatttagaaaacaggagtaccgatacaccttaattt 421  Q
    |||||||||   ||  | |||||||| |||||||||||||    
T  45857537 tataaatttttgaagtaagagtaccggtacaccttaattt 45857498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 390
Target Start/End: Original strand, 41809474 - 41809551
Alignment:
Q  313 tgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaattt 390  Q
    |||||||||||||||| | ||||||||  | |||||||| | ||||||| ||||||||||| |||||| |||| ||||    
T  41809474 tgaaatgatattttctaaaatataaatatcaacaaataattctttatttcataaaattgatagttaatttatagattt 41809551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 304 - 432
Target Start/End: Original strand, 15877340 - 15877468
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||| ||||||| | | ||||||| | | ||||||| || ||| ||  |||||| |||| |||||  ||| ||||||  ||||||| ||    
T  15877340 tttttcttatgaaataatattttataaaatataaaagtcaacaaatagctcttttttacataaaaatgatcgttaacttattaatttatgaaacaggtgt 15877439  T
Q  404 accgatacaccttaatttatgagtgtacc 432  Q
    |||| |||||||||||||| | |||||||    
T  15877440 accggtacaccttaatttaagggtgtacc 15877468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 24812322 - 24812480
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    ||||||||||||||| || || ||| |||||||| ||||||| | || | | | ||||||||   |||||||||||||||| |  ||||||   | ||||    
T  24812322 attcttataaacaattaaatgatgt-tttttcttatgaaatgttgttctataaaatataaatattgacaaataactatttactacataaaa---aatgtt 24812417  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     || |||||| ||| ||||||||||||||||||||||||| ||| | |||||| | |||||||    
T  24812418 catttataaaattaaaaaacaggagtaccgatacaccttattttgttagtgtatcgtagaagt 24812480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 279 - 438
Target Start/End: Complemental strand, 37118499 - 37118340
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgtt 377  Q
    ||||||||||| |||||| || ||| |||||||| |||||| ||||||||| | ||||||| | ||| |||||  | ||||||  |||||| |||| |||    
T  37118499 attcttataaagaatgaaatgatgt-tttttcttatgaaataatattttctaaaatataaaagtcgataaatatttctttattacataaaaatgatcgtt 37118401  T
Q  378 aatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaa 438  Q
    ||| |||  |||||  ||| ||| ||| || ||||||||||||||||  |||||| |||||    
T  37118400 aatttattgatttatgaaataggtgtatcggtacaccttaatttatggatgtaccgtagaa 37118340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 282 - 440
Target Start/End: Complemental strand, 45196967 - 45196808
Alignment:
Q  282 cttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    ||||||||||||||| || || ||||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  |||||    
T  45196967 cttataaacaatgaaatgatg-gtttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcattaat 45196869  T
Q  381 gtataaatttaga-aaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
     |||| |||| |  ||||| |||||||| |||||   || || ||||||||||||||||||    
T  45196868 ttatatattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagt 45196808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 421
Target Start/End: Complemental strand, 8770531 - 8770393
Alignment:
Q  283 ttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatg 381  Q
    |||||||||||||| || ||| |||||||| || ||||||||||||| | ||| ||||  | ||||| |||| ||||||| |||||| |||| ||||||     
T  8770531 ttataaacaatgaaatgatgt-tttttcttatgtaatgatattttctaaaatacaaatatcaacaaacaactctttatttcataaaaatgatagttaatt 8770433  T
Q  382 tataaatttagaaaacaggagtaccgatacaccttaattt 421  Q
    |||| ||||   || || ||||| || |||||||||||||    
T  8770432 tatagatttttgaagcaagagtatcggtacaccttaattt 8770393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 303 - 440
Target Start/End: Original strand, 25867170 - 25867308
Alignment:
Q  303 gtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacagga 401  Q
    |||||| || ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| |||| |||||| |||| |||| |  ||||| ||    
T  25867170 gttttttttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatcgttaatttatatattttgtgaaacaaga 25867269  T
Q  402 gtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||| |||||   || || ||||||||||||||||||    
T  25867270 gtaccggtacactcaaaattgtgagtgtaccatagaagt 25867308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 303 - 369
Target Start/End: Complemental strand, 40379112 - 40379046
Alignment:
Q  303 gtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat 369  Q
    ||||||||| | |||||||||||||| | ||||||||   || |||||||| |||||||||||||||    
T  40379112 gtttttcttataaaatgatattttctaaaatataaatattgataaataactttttattttataaaat 40379046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 304 - 440
Target Start/End: Original strand, 9923336 - 9923473
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggag 402  Q
    |||||||| ||||||||| |||||| | ||||||||   |||||||| || ||||||| || ||| ||||  ||||| |||| |||| |  ||||| |||    
T  9923336 tttttcttatgaaatgatgttttctaaaatataaatattgacaaatacctttttatttcattaaagtgatctttaatttatatattttgtgaaacaagag 9923435  T
Q  403 taccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||| |||||   || || ||||||||||||||||||    
T  9923436 taccggtacactcaaaattgtgagtgtaccatagaagt 9923473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 2e-49; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 212 - 438
Target Start/End: Original strand, 6093829 - 6094051
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| |||||||||||||||||||||||||||||  |||||||||           ||||||| | |||||||||||||||||| ||  ||||||||    
T  6093829 tttatcgctcaaaatagagaactttgattattttatacaataatatgtaaaaaaa----ttattatgactcttataaacaatgaatgatgcatttttctt 6093924  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||| | |||| |||||  ||||| ||||||||||||    
T  6093925 ctgaaatcatattttctaagatataaatgccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaaacaagagtaccgatac 6094024  T
Q  412 accttaatttatgagtgtaccatagaa 438  Q
    | ||| ||||| ||||||||| |||||    
T  6094025 atcttgatttacgagtgtaccgtagaa 6094051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 31644638 - 31644414
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||           ||| ||| ||||||||||| |||||||| |  |||||||||    
T  31644638 tttatcgctcataatagagaactttgattattttatacgataatatgtaaaaaaa----ttactatgattcttataaataatgaatgatacgtttttctt 31644543  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||| | |||| |||||  || || ||||||||||||    
T  31644542 ctgaaatcatattttctaaaatataaatgccgacaaataactatttatttcataaaattgattgttagtttatagatttatgaagcaagagtaccgatac 31644443  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| ||||||||| |||||||    
T  31644442 acctcaatttacgagtgtaccgtagaagt 31644414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 6e-46
Query Start/End: Original strand, 201 - 440
Target Start/End: Original strand, 21970473 - 21970709
Alignment:
Q  201 taaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatgg 299  Q
    |||||||||| ||| |||| ||| ||||||||||||||||||||||||||||||||||||           ||| ||| ||| ||||||||||||||||     
T  21970473 taaaattgaattttcatcgctcataatagagaactttgattattttatatgataatatgttaaaaat----ttactatgatttttataaacaatgaatga 21970568  T
Q  300 tgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacag 399  Q
    | | |||||||| |||||||||||||| | | |||||||||||||||||||||||||||||| ||||||||||| |||||| |||| |||||| ||  |     
T  21970569 tatatttttcttatgaaatgatattttgtaaaatataaatgccgacaaataactatttatttcataaaattgatcgttaatttatagatttaggaagtaa 21970668  T
Q  400 gagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||||||| ||||||  |||||||||||||||| |||||||    
T  21970669 gagtaccggtacaccagaatttatgagtgtaccgtagaagt 21970709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 9e-39
Query Start/End: Original strand, 212 - 440
Target Start/End: Complemental strand, 29023845 - 29023623
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattattattcttataaacaatgaatggtgtgtttttctt 311  Q
    ||||||| ||| |||||||||||||||||||||||||  ||||||||            ||| ||| |||||||||||||||||||| ||  ||||||||    
T  29023845 tttatcgctcataatagagaactttgattattttatacaataatatgaaaaaa------ttactatgattcttataaacaatgaatgatgcatttttctt 29023752  T
Q  312 ctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatac 411  Q
    ||||||| ||||||||  | |||||||||||||||||||||||||||||| ||||||||||| |||| | |||| |||||  || || |||||||| |||    
T  29023751 ctgaaatcatattttccaaaatataaatgccgacaaataactatttatttcataaaattgatcgttagtttatagatttatgaagcaagagtaccggtac 29023652  T
Q  412 accttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| ||||||||| |||||||    
T  29023651 acctcaatttacgagtgtaccgtagaagt 29023623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 181 - 440
Target Start/End: Complemental strand, 18667950 - 18667691
Alignment:
Q  181 caccaaaagcctcaatgaattaaaattgaacttt-atcgttcaaaatagagaactttgattattttatatgataatatgtnnnnnnnnnncttattatta 279  Q
    |||||||||| |||| ||| |||||||||| ||| ||| |||| |||||| |||||||||||||||||| ||||||||||           ||| ||| |    
T  18667950 caccaaaagcgtcaacgaaataaaattgaatttttatccttcataatagataactttgattattttatacgataatatgttaaaaat----ttactataa 18667855  T
Q  280 ttcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatg---ccgacaaataactatttattttataaaattgattgt 376  Q
    ||||||||||||||||||| ||||||||| || | |||||||||||||| | |||||||||   |||| |||||||||||||| | ||||||||||| ||    
T  18667854 ttcttataaacaatgaatgatgtgttttttttataaaatgatattttctaaaatataaatgttgccgataaataactatttatctcataaaattgatcgt 18667755  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||| |||||| ||  | |||||||| ||||||  |||||| ||||||||| |||||||    
T  18667754 taatttatagatttaggaattaagagtaccggtacaccacaatttacgagtgtaccgtagaagt 18667691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000003
Query Start/End: Original strand, 304 - 441
Target Start/End: Complemental strand, 8376160 - 8376023
Alignment:
Q  304 tttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagt 403  Q
    |||||||| |||||||| || |||| | ||||||||  | ||||||| || ||||||  |||||| | || |||||| || ||||||  |||| ||||||    
T  8376160 tttttcttatgaaatgacatcttctaaaatataaatatcaacaaatagctttttattccataaaaataatagttaatttaaaaatttttaaaataggagt 8376061  T
Q  404 accgatacaccttaatttatgagtgtaccatagaagtc 441  Q
    | |||||||||||||||| || ||||||| ||||||||    
T  8376060 atcgatacaccttaatttgtgggtgtaccgtagaagtc 8376023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 321 - 440
Target Start/End: Complemental strand, 4979222 - 4979104
Alignment:
Q  321 tattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgatacaccttaatt 420  Q
    |||||||| | |||||||| |||| |||||||||||||||| |||||||||||  ||||| ||||||||||  ||| |  | ||||  ||||||||||||    
T  4979222 tattttctaaaatataaataccgataaataactatttatttcataaaattgatcattaatttataaatttatgaaataaaaataccagtacaccttaatt 4979123  T
Q  421 tatgagtgtaccatagaagt 440  Q
    ||  |||||||| |||||||    
T  4979122 ta-cagtgtaccgtagaagt 4979104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 12782824 - 12782871
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgt 259  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  12782824 tttatcgctcataatagagaactttgattattttatacgataatatgt 12782871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 369
Target Start/End: Complemental strand, 7344486 - 7344396
Alignment:
Q  279 attcttataaacaatgaa-tggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaat 369  Q
    |||||||||||||||||| |  ||| |||||||| | |||||||||||||| | ||||||||  ||| |||||||| ||||||| |||||||    
T  7344486 attcttataaacaatgaaataatgt-tttttcttataaaatgatattttctaaaatataaatatcgataaataactctttatttcataaaat 7344396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 9687016 - 9687178
Alignment:
Q  279 attcttataaacaatgaatgg-tgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttat-aaaattgattgt 376  Q
    ||||| ||||||||||||| | ||| |||||||| |||||||||||||| | | ||||||||   || |||||  ||||||||| || |||| |||| ||    
T  9687016 attctgataaacaatgaattgatgt-tttttcttatgaaatgatattttataaaatataaatattgataaatagttatttatttcataaaaaatgatcgt 9687114  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  ||  | ||||| |||||||||| | ||| |||||||||| |||||||    
T  9687115 taatttataaaattaagaagaaagagtatcgatacacctcattttgtgagtgtaccgtagaagt 9687178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 4979306 - 4979273
Alignment:
Q  224 aatagagaactttgattattttatatgataatat 257  Q
    ||||||||||||||||||||||||| ||||||||    
T  4979306 aatagagaactttgattattttatacgataatat 4979273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 344 - 440
Target Start/End: Original strand, 34969738 - 34969835
Alignment:
Q  344 acaaataactatttattttataaaattgattgttaatgtataaatttaga-aaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    ||||||| || |||||||||| ||| |||| |||||| ||||||||| |  ||||| |||||||| |||||   || || ||||||||||||||||||    
T  34969738 acaaatacctttttattttattaaagtgatcgttaatttataaattttgtgaaacaagagtaccggtacactcaaaattgtgagtgtaccatagaagt 34969835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 90; Significance: 6e-43; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 281 - 430
Target Start/End: Original strand, 45316 - 45465
Alignment:
Q  281 tcttataaacaatgaatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaat 380  Q
    |||||||||||||||||| |||||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||    
T  45316 tcttataaacaatgaatgatgtgtttttcttatgaaatgatgttttctgaaatataaatgccgacaaataactatttatttcataaaattgatcgttaat 45415  T
Q  381 gtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgta 430  Q
     |||| |||||| ||  | |||||||| |||||| ||||||| |||||||    
T  45416 ttatagatttagtaagtaagagtaccggtacaccataatttacgagtgta 45465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 313 - 440
Target Start/End: Original strand, 32802 - 32929
Alignment:
Q  313 tgaaatgatattttctgagatataaatgccgacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagtaccgataca 412  Q
    |||||||||||||||| | |||||||||||| ||||||||||||||| | ||||||| ||| |||||| |||| |||||||||  | |||||||| ||||    
T  32802 tgaaatgatattttctaaaatataaatgccgccaaataactatttatctcataaaatagatcgttaatttatagatttagaaagtaagagtaccggtaca 32901  T
Q  413 ccttaatttatgagtgtaccatagaagt 440  Q
    ||  | |||| ||||||||| |||||||    
T  32902 ccacagtttacgagtgtaccgtagaagt 32929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0775 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 75 - 28
Alignment:
Q  212 tttatcgttcaaaatagagaactttgattattttatatgataatatgt 259  Q
    ||||||| ||| |||||||||||||||||| |||||| ||||||||||    
T  75 tttatcgctcataatagagaactttgattactttatacgataatatgt 28  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 279 - 440
Target Start/End: Original strand, 73 - 235
Alignment:
Q  279 attcttataaacaatg-aatggtgtgtttttcttctgaaatgatattttctgagatataaatgccgacaaataactatttattttat-aaaattgattgt 376  Q
    |||||||||||||||| |||| ||| ||||| || ||||||||| || | | | ||||||||   |||||||| |||||||||  || |||| |||| ||    
T  73 attcttataaacaatgaaatgatgt-ttttttttatgaaatgatgttatataaaatataaatattgacaaatagctatttattacataaaaaatgatcgt 171  T
Q  377 taatgtataaatttagaaaacaggagtaccgatacaccttaatttatgagtgtaccatagaagt 440  Q
    |||| |||||| |||  || ||| ||||||| ||||||| | ||| |||||||||| |||||||    
T  172 taatttataaaattatgaagcagaagtaccggtacacctcactttgtgagtgtaccgtagaagt 235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 30; Significance: 0.0000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 343 - 404
Target Start/End: Complemental strand, 271071 - 271010
Alignment:
Q  343 gacaaataactatttattttataaaattgattgttaatgtataaatttagaaaacaggagta 404  Q
    ||||||||||| ||||||| |||||| |||| |||||| |||||||||| ||| || |||||    
T  271071 gacaaataactctttatttcataaaaatgatcgttaatttataaatttataaagcaagagta 271010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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