View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4475_high_4 (Length: 300)
Name: NF4475_high_4
Description: NF4475
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4475_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 153 - 290
Target Start/End: Complemental strand, 39718433 - 39718295
Alignment:
| Q |
153 |
ttctatgcaattcacatttaatttatttagcttggttcatgtatttttgnnnnnnnnnnnnnnn-ggagtcttcgttctttacccttttaagtcctgttt |
251 |
Q |
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| T |
39718433 |
ttctatgcaattcacatttaatttatttagcttggttcatgtatttttgaaaaaagaaaaaaaaaggagtcttcgttctttacccttttaagtcctgttt |
39718334 |
T |
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| Q |
252 |
cttattgccatgtgggtccctcccttgcactaccctatg |
290 |
Q |
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|||||||||||||||||||||||||||||||||| |||| |
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| T |
39718333 |
cttattgccatgtgggtccctcccttgcactaccttatg |
39718295 |
T |
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